HEADER TRANSFERASE 16-MAY-11 3S1T TITLE STRUCTURE OF THE REGULATORY DOMAIN OF ASPARTOKINASE (RV3709C; AK-BETA) TITLE 2 IN COMPLEX WITH THREONINE FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ASPARTOKINASE BETA-SUBUNIT, RESIDUES 251-421; COMPND 5 SYNONYM: ASPARTATE KINASE, ASK; COMPND 6 EC: 2.7.2.4; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ASPARTOKINASE; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: ASK, MT3812, MTV025.057C, RV3709C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CC2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM-13; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 13 ORGANISM_TAXID: 83332; SOURCE 14 STRAIN: H37RV; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CC2; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PETM-13 KEYWDS ACT DOMAIN, THREONINE BINDING; REGULATORY DOMAIN OF ASPARTOKINASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.SCHULDT,J.MUELLER-DIECKMANN,M.S.WEISS REVDAT 3 13-SEP-23 3S1T 1 REMARK REVDAT 2 29-JAN-20 3S1T 1 REMARK SEQADV REVDAT 1 13-JUN-12 3S1T 0 JRNL AUTH L.SCHULDT,J.MUELLER-DIECKMANN,M.S.WEISS JRNL TITL HIGH-RESOLUTION X-RAY STRUCTURE OF THE REGULATORY DOMAIN OF JRNL TITL 2 THE MYCOBACTERIAL ASPARTOKINASE IN COMPLEX WITH THREONINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.SCHULDT,R.SUCHOWERSKY,K.VEITH,J.MUELLER-DIECKMANN, REMARK 1 AUTH 2 M.S.WEISS REMARK 1 TITL CLONING, EXPRESSION, PURIFICATION, CRYSTALLIZATION AND REMARK 1 TITL 2 PRELIMINARY X-RAY DIFFRACTION ANALYSIS OF THE REGULATORY REMARK 1 TITL 3 DOMAIN OF ASPARTOKINASE (RV3709C) FROM MYCOBACTERIUM REMARK 1 TITL 4 TUBERCULOSIS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 67 380 2011 REMARK 1 REFN ESSN 1744-3091 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0091 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 45214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1450 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3098 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2409 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 219 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.34000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.197 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2522 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3437 ; 1.778 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 336 ; 5.931 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;29.356 ;24.646 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 422 ;14.689 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;18.015 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 428 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1841 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 13 REMARK 3 ORIGIN FOR THE GROUP (A): 32.7185 41.2855 29.4167 REMARK 3 T TENSOR REMARK 3 T11: 0.1077 T22: 0.0054 REMARK 3 T33: 0.0631 T12: 0.0107 REMARK 3 T13: -0.0344 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 8.5683 L22: 3.9301 REMARK 3 L33: 19.8820 L12: 2.3167 REMARK 3 L13: -7.4778 L23: -5.2684 REMARK 3 S TENSOR REMARK 3 S11: 0.2821 S12: 0.0552 S13: 0.2503 REMARK 3 S21: 0.3704 S22: 0.0210 S23: 0.0643 REMARK 3 S31: -0.4698 S32: 0.0014 S33: -0.3031 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 94 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1613 44.5006 3.6961 REMARK 3 T TENSOR REMARK 3 T11: 0.0199 T22: 0.0507 REMARK 3 T33: 0.0391 T12: -0.0058 REMARK 3 T13: -0.0039 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 4.2542 L22: 0.5648 REMARK 3 L33: 1.6372 L12: 0.0182 REMARK 3 L13: -0.5504 L23: 0.3795 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.0940 S13: 0.0036 REMARK 3 S21: -0.0233 S22: -0.0013 S23: -0.0626 REMARK 3 S31: 0.0972 S32: 0.0380 S33: 0.0119 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 134 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6230 47.8097 26.9824 REMARK 3 T TENSOR REMARK 3 T11: 0.0866 T22: 0.0443 REMARK 3 T33: 0.0531 T12: -0.0109 REMARK 3 T13: -0.0184 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 1.0907 L22: 3.0701 REMARK 3 L33: 2.9006 L12: -0.9276 REMARK 3 L13: 0.2937 L23: -0.7237 REMARK 3 S TENSOR REMARK 3 S11: -0.1222 S12: -0.0303 S13: -0.1481 REMARK 3 S21: 0.2296 S22: 0.1115 S23: 0.1387 REMARK 3 S31: 0.0480 S32: -0.1626 S33: 0.0106 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 135 A 160 REMARK 3 ORIGIN FOR THE GROUP (A): 35.5681 48.7634 26.4500 REMARK 3 T TENSOR REMARK 3 T11: 0.0745 T22: 0.0400 REMARK 3 T33: 0.0805 T12: 0.0233 REMARK 3 T13: -0.0428 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 5.7766 L22: 1.8154 REMARK 3 L33: 8.0388 L12: 1.0522 REMARK 3 L13: 0.3484 L23: -0.0185 REMARK 3 S TENSOR REMARK 3 S11: -0.0164 S12: 0.0215 S13: -0.0512 REMARK 3 S21: 0.2992 S22: 0.1493 S23: -0.2984 REMARK 3 S31: -0.0969 S32: 0.4569 S33: -0.1329 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 163 C 173 REMARK 3 ORIGIN FOR THE GROUP (A): 53.1905 24.7888 38.5691 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.4062 REMARK 3 T33: 0.4099 T12: -0.0728 REMARK 3 T13: -0.0208 T23: -0.0596 REMARK 3 L TENSOR REMARK 3 L11: 13.0439 L22: 15.3120 REMARK 3 L33: 16.5579 L12: -13.4065 REMARK 3 L13: 14.5606 L23: -14.3435 REMARK 3 S TENSOR REMARK 3 S11: -0.5635 S12: 0.2630 S13: 0.5290 REMARK 3 S21: 0.2249 S22: -0.0828 S23: -0.0664 REMARK 3 S31: -0.7452 S32: 0.5005 S33: 0.6463 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0386 28.6127 18.0180 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.0853 REMARK 3 T33: 0.0622 T12: -0.0465 REMARK 3 T13: -0.0278 T23: 0.0381 REMARK 3 L TENSOR REMARK 3 L11: 18.7666 L22: 22.0199 REMARK 3 L33: 4.2592 L12: -15.7919 REMARK 3 L13: -5.4713 L23: 6.9649 REMARK 3 S TENSOR REMARK 3 S11: 0.4371 S12: 0.5918 S13: -0.4020 REMARK 3 S21: -0.0924 S22: -0.4678 S23: 0.1642 REMARK 3 S31: 0.3715 S32: -0.3637 S33: 0.0307 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 14 B 94 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7937 55.2954 23.1079 REMARK 3 T TENSOR REMARK 3 T11: 0.1029 T22: 0.0618 REMARK 3 T33: 0.0587 T12: 0.0181 REMARK 3 T13: 0.0067 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 3.0215 L22: 2.7850 REMARK 3 L33: 1.2393 L12: 0.7685 REMARK 3 L13: 0.2023 L23: 0.7431 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: 0.0330 S13: 0.1415 REMARK 3 S21: 0.1603 S22: 0.0210 S23: 0.1975 REMARK 3 S31: -0.0688 S32: -0.2007 S33: 0.0097 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 95 B 134 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6818 34.7446 11.7683 REMARK 3 T TENSOR REMARK 3 T11: 0.1255 T22: 0.0920 REMARK 3 T33: 0.0973 T12: -0.0311 REMARK 3 T13: -0.0351 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 0.2213 L22: 4.7419 REMARK 3 L33: 2.9417 L12: -0.1900 REMARK 3 L13: -0.7943 L23: 0.0651 REMARK 3 S TENSOR REMARK 3 S11: -0.1127 S12: -0.0553 S13: -0.0103 REMARK 3 S21: 0.2217 S22: 0.0280 S23: -0.3828 REMARK 3 S31: 0.4185 S32: 0.1773 S33: 0.0847 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 135 B 158 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3027 32.8940 13.1272 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.1719 REMARK 3 T33: 0.0919 T12: -0.1190 REMARK 3 T13: 0.0393 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 4.3532 L22: 8.0066 REMARK 3 L33: 2.8667 L12: -2.2832 REMARK 3 L13: 0.0236 L23: 2.6418 REMARK 3 S TENSOR REMARK 3 S11: 0.0544 S12: -0.0246 S13: -0.3308 REMARK 3 S21: 0.4186 S22: -0.2524 S23: 0.5480 REMARK 3 S31: 0.6767 S32: -0.5513 S33: 0.1980 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3S1T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47641 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2DTJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, BIS-TRIS, PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.85000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.42500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.71500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.42500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.71500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.70000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 31.71500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 54.42500 REMARK 400 REMARK 400 COMPOUND REMARK 400 AUTHORS STATE THAT THE ASYMMETRIC UNIT OF THE CRYSTALS CONTAINS A REMARK 400 HOMODIMER FORMED BY THE TWO POLYPEPTIDE CHAINS A AND B (SEQUENCE REMARK 400 RANGE 3-160). CHAIN C REPRESENTS THE C-TERMINAL TAIL OF THE REMARK 400 POLYPEPTIDE CHAIN (SEQUENCE RANGE 163-173). DUE TO LACK OF ELECTRON REMARK 400 DENSITY IN THE LINKER REGION, IT COULD NOT BE UNAMBIGUOUSLY REMARK 400 ASSIGNED WHEATHER THIS FRAGMENT ORIGINATES FROM CHAIN A OR FROM REMARK 400 CHAIN B OF A NEIGHBORING ASYMMETRIC UNIT. HENCE THE FRAGMENT WAS REMARK 400 DECLARED AS CHAIN C. THIS IS ALSO DISCUSSED IN THE PUBLICATION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 161 REMARK 465 GLU A 162 REMARK 465 GLU A 163 REMARK 465 ALA A 164 REMARK 465 THR A 165 REMARK 465 VAL A 166 REMARK 465 TYR A 167 REMARK 465 ALA A 168 REMARK 465 GLY A 169 REMARK 465 THR A 170 REMARK 465 GLY A 171 REMARK 465 ARG A 172 REMARK 465 LEU A 173 REMARK 465 GLU A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 HIS A 180 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLU B 2 REMARK 465 GLY B 159 REMARK 465 GLY B 160 REMARK 465 ASP B 161 REMARK 465 GLU B 162 REMARK 465 GLU B 163 REMARK 465 ALA B 164 REMARK 465 THR B 165 REMARK 465 VAL B 166 REMARK 465 TYR B 167 REMARK 465 ALA B 168 REMARK 465 GLY B 169 REMARK 465 THR B 170 REMARK 465 GLY B 171 REMARK 465 ARG B 172 REMARK 465 LEU B 173 REMARK 465 GLU B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 465 HIS B 177 REMARK 465 HIS B 178 REMARK 465 HIS B 179 REMARK 465 HIS B 180 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 SO4 A 183 O HOH A 190 2.02 REMARK 500 O HOH A 264 O HOH A 292 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 13 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASP A 142 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 MET B 46 CA - CB - CG ANGL. DEV. = 11.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 -91.05 -95.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 183 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 184 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THR B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 183 DBREF 3S1T A 2 172 UNP P0A4Z8 AK_MYCTU 251 421 DBREF 3S1T B 2 172 UNP P0A4Z8 AK_MYCTU 251 421 DBREF 3S1T C 163 173 UNP P0A4Z8 AK_MYCTU 163 173 SEQADV 3S1T MET A 0 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T SER A 1 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T LEU A 173 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T GLU A 174 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS A 175 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS A 176 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS A 177 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS A 178 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS A 179 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS A 180 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T MET B 0 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T SER B 1 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T LEU B 173 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T GLU B 174 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS B 175 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS B 176 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS B 177 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS B 178 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS B 179 UNP P0A4Z8 EXPRESSION TAG SEQADV 3S1T HIS B 180 UNP P0A4Z8 EXPRESSION TAG SEQRES 1 A 181 MET SER GLU ASP PRO ILE LEU THR GLY VAL ALA HIS ASP SEQRES 2 A 181 ARG SER GLU ALA LYS VAL THR ILE VAL GLY LEU PRO ASP SEQRES 3 A 181 ILE PRO GLY TYR ALA ALA LYS VAL PHE ARG ALA VAL ALA SEQRES 4 A 181 ASP ALA ASP VAL ASN ILE ASP MET VAL LEU GLN ASN VAL SEQRES 5 A 181 SER LYS VAL GLU ASP GLY LYS THR ASP ILE THR PHE THR SEQRES 6 A 181 CYS SER ARG ASP VAL GLY PRO ALA ALA VAL GLU LYS LEU SEQRES 7 A 181 ASP SER LEU ARG ASN GLU ILE GLY PHE SER GLN LEU LEU SEQRES 8 A 181 TYR ASP ASP HIS ILE GLY LYS VAL SER LEU ILE GLY ALA SEQRES 9 A 181 GLY MET ARG SER HIS PRO GLY VAL THR ALA THR PHE CYS SEQRES 10 A 181 GLU ALA LEU ALA ALA VAL GLY VAL ASN ILE GLU LEU ILE SEQRES 11 A 181 SER THR SER GLU ILE ARG ILE SER VAL LEU CYS ARG ASP SEQRES 12 A 181 THR GLU LEU ASP LYS ALA VAL VAL ALA LEU HIS GLU ALA SEQRES 13 A 181 PHE GLY LEU GLY GLY ASP GLU GLU ALA THR VAL TYR ALA SEQRES 14 A 181 GLY THR GLY ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 181 MET SER GLU ASP PRO ILE LEU THR GLY VAL ALA HIS ASP SEQRES 2 B 181 ARG SER GLU ALA LYS VAL THR ILE VAL GLY LEU PRO ASP SEQRES 3 B 181 ILE PRO GLY TYR ALA ALA LYS VAL PHE ARG ALA VAL ALA SEQRES 4 B 181 ASP ALA ASP VAL ASN ILE ASP MET VAL LEU GLN ASN VAL SEQRES 5 B 181 SER LYS VAL GLU ASP GLY LYS THR ASP ILE THR PHE THR SEQRES 6 B 181 CYS SER ARG ASP VAL GLY PRO ALA ALA VAL GLU LYS LEU SEQRES 7 B 181 ASP SER LEU ARG ASN GLU ILE GLY PHE SER GLN LEU LEU SEQRES 8 B 181 TYR ASP ASP HIS ILE GLY LYS VAL SER LEU ILE GLY ALA SEQRES 9 B 181 GLY MET ARG SER HIS PRO GLY VAL THR ALA THR PHE CYS SEQRES 10 B 181 GLU ALA LEU ALA ALA VAL GLY VAL ASN ILE GLU LEU ILE SEQRES 11 B 181 SER THR SER GLU ILE ARG ILE SER VAL LEU CYS ARG ASP SEQRES 12 B 181 THR GLU LEU ASP LYS ALA VAL VAL ALA LEU HIS GLU ALA SEQRES 13 B 181 PHE GLY LEU GLY GLY ASP GLU GLU ALA THR VAL TYR ALA SEQRES 14 B 181 GLY THR GLY ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 11 GLU ALA THR VAL TYR ALA GLY THR GLY ARG LEU HET THR A 301 8 HET SO4 A 181 5 HET SO4 A 182 5 HET SO4 A 183 5 HET SO4 A 184 5 HET THR B 302 8 HET SO4 B 181 5 HET SO4 B 182 5 HET SO4 B 183 5 HETNAM THR THREONINE HETNAM SO4 SULFATE ION FORMUL 4 THR 2(C4 H9 N O3) FORMUL 5 SO4 7(O4 S 2-) FORMUL 13 HOH *219(H2 O) HELIX 1 1 GLY A 28 ALA A 40 1 13 HELIX 2 2 VAL A 69 LEU A 80 1 12 HELIX 3 3 LEU A 80 GLY A 85 1 6 HELIX 4 4 HIS A 108 VAL A 122 1 15 HELIX 5 5 GLU A 144 GLY A 157 1 14 HELIX 6 6 GLY B 28 ALA B 40 1 13 HELIX 7 7 VAL B 69 SER B 79 1 11 HELIX 8 8 LEU B 80 GLY B 85 1 6 HELIX 9 9 HIS B 108 VAL B 122 1 15 HELIX 10 10 GLU B 144 GLY B 157 1 14 SHEET 1 A 8 ILE A 5 ASP A 12 0 SHEET 2 A 8 ILE A 95 ALA A 103 -1 O SER A 99 N ALA A 10 SHEET 3 A 8 ARG A 135 ARG A 141 -1 O CYS A 140 N GLY A 96 SHEET 4 A 8 LEU A 128 SER A 132 -1 N SER A 130 O SER A 137 SHEET 5 A 8 VAL B 47 GLN B 49 -1 O GLN B 49 N ILE A 129 SHEET 6 A 8 LYS B 58 SER B 66 -1 O THR B 62 N LEU B 48 SHEET 7 A 8 GLU B 15 PRO B 24 -1 N ILE B 20 O ILE B 61 SHEET 8 A 8 GLN B 88 ASP B 92 -1 O GLN B 88 N VAL B 21 SHEET 1 B 8 GLN A 88 ASP A 92 0 SHEET 2 B 8 GLU A 15 PRO A 24 -1 N VAL A 21 O GLN A 88 SHEET 3 B 8 LYS A 58 SER A 66 -1 O ILE A 61 N ILE A 20 SHEET 4 B 8 VAL A 47 GLN A 49 -1 N LEU A 48 O THR A 62 SHEET 5 B 8 LEU B 128 THR B 131 -1 O ILE B 129 N GLN A 49 SHEET 6 B 8 ARG B 135 ARG B 141 -1 O SER B 137 N SER B 130 SHEET 7 B 8 ILE B 95 ALA B 103 -1 N GLY B 96 O CYS B 140 SHEET 8 B 8 ILE B 5 ASP B 12 -1 N GLY B 8 O ILE B 101 SITE 1 AC1 13 PRO A 24 ASP A 25 ILE A 26 PRO A 27 SITE 2 AC1 13 GLY A 28 TYR A 29 ALA A 30 GLN A 49 SITE 3 AC1 13 THR A 59 HOH A 230 HOH A 231 ASN B 125 SITE 4 AC1 13 ILE B 126 SITE 1 AC2 6 HIS A 108 PRO A 109 GLY A 110 VAL A 111 SITE 2 AC2 6 HOH A 303 HOH A 307 SITE 1 AC3 5 HIS A 11 HIS A 153 HOH A 194 HOH A 284 SITE 2 AC3 5 ASN B 82 SITE 1 AC4 9 SER A 79 ARG A 81 HOH A 190 ARG B 141 SITE 2 AC4 9 HOH B 271 ALA C 168 GLY C 169 THR C 170 SITE 3 AC4 9 GLY C 171 SITE 1 AC5 3 HIS A 11 ASP A 12 ARG A 13 SITE 1 AC6 11 ASN A 125 ILE A 126 PRO B 24 ASP B 25 SITE 2 AC6 11 ILE B 26 GLY B 28 TYR B 29 ALA B 30 SITE 3 AC6 11 GLN B 49 HOH B 221 HOH B 222 SITE 1 AC7 3 ARG A 81 ASN A 82 THR B 143 SITE 1 AC8 5 HIS B 108 PRO B 109 GLY B 110 VAL B 111 SITE 2 AC8 5 HOH B 270 SITE 1 AC9 3 HIS B 11 ASP B 12 ARG B 13 CRYST1 53.700 63.430 108.850 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018622 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015765 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009187 0.00000