data_3S26 # _entry.id 3S26 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.341 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3S26 RCSB RCSB065666 WWPDB D_1000065666 # _pdbx_database_status.entry_id 3S26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Correnti, C.' 1 'Bandaranayake, A.D.' 2 'Strong, R.K.' 3 # _citation.id primary _citation.title ;Daedalus: a robust, turnkey platform for rapid production of decigram quantities of active recombinant proteins in human cell lines using novel lentiviral vectors. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 39 _citation.page_first e143 _citation.page_last e143 _citation.year 2011 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21911364 _citation.pdbx_database_id_DOI 10.1093/nar/gkr706 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bandaranayake, A.D.' 1 ? primary 'Correnti, C.' 2 ? primary 'Ryu, B.Y.' 3 ? primary 'Brault, M.' 4 ? primary 'Strong, R.K.' 5 ? primary 'Rawlings, D.J.' 6 ? # _cell.entry_id 3S26 _cell.length_a 42.890 _cell.length_b 43.960 _cell.length_c 101.920 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S26 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Neutrophil gelatinase-associated lipocalin' 22096.742 1 ? ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 3 water nat water 18.015 89 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NGAL, Lipocalin-2, SV-40-induced 24P3 protein, p25' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QDSTQNLIPAPSLLTVPLQPDFRSDQFRGRWYVVGLAGNAVQKKTEGSFTMYSTIYELQENNSYNVTSILVRDQDQGCRY WIRTFVPSSRAGQFTLGNMHRYPQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKS LGLKDDNIIFSVPTDQCIDNSAWSHPQFEK ; _entity_poly.pdbx_seq_one_letter_code_can ;QDSTQNLIPAPSLLTVPLQPDFRSDQFRGRWYVVGLAGNAVQKKTEGSFTMYSTIYELQENNSYNVTSILVRDQDQGCRY WIRTFVPSSRAGQFTLGNMHRYPQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKS LGLKDDNIIFSVPTDQCIDNSAWSHPQFEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ASP n 1 3 SER n 1 4 THR n 1 5 GLN n 1 6 ASN n 1 7 LEU n 1 8 ILE n 1 9 PRO n 1 10 ALA n 1 11 PRO n 1 12 SER n 1 13 LEU n 1 14 LEU n 1 15 THR n 1 16 VAL n 1 17 PRO n 1 18 LEU n 1 19 GLN n 1 20 PRO n 1 21 ASP n 1 22 PHE n 1 23 ARG n 1 24 SER n 1 25 ASP n 1 26 GLN n 1 27 PHE n 1 28 ARG n 1 29 GLY n 1 30 ARG n 1 31 TRP n 1 32 TYR n 1 33 VAL n 1 34 VAL n 1 35 GLY n 1 36 LEU n 1 37 ALA n 1 38 GLY n 1 39 ASN n 1 40 ALA n 1 41 VAL n 1 42 GLN n 1 43 LYS n 1 44 LYS n 1 45 THR n 1 46 GLU n 1 47 GLY n 1 48 SER n 1 49 PHE n 1 50 THR n 1 51 MET n 1 52 TYR n 1 53 SER n 1 54 THR n 1 55 ILE n 1 56 TYR n 1 57 GLU n 1 58 LEU n 1 59 GLN n 1 60 GLU n 1 61 ASN n 1 62 ASN n 1 63 SER n 1 64 TYR n 1 65 ASN n 1 66 VAL n 1 67 THR n 1 68 SER n 1 69 ILE n 1 70 LEU n 1 71 VAL n 1 72 ARG n 1 73 ASP n 1 74 GLN n 1 75 ASP n 1 76 GLN n 1 77 GLY n 1 78 CYS n 1 79 ARG n 1 80 TYR n 1 81 TRP n 1 82 ILE n 1 83 ARG n 1 84 THR n 1 85 PHE n 1 86 VAL n 1 87 PRO n 1 88 SER n 1 89 SER n 1 90 ARG n 1 91 ALA n 1 92 GLY n 1 93 GLN n 1 94 PHE n 1 95 THR n 1 96 LEU n 1 97 GLY n 1 98 ASN n 1 99 MET n 1 100 HIS n 1 101 ARG n 1 102 TYR n 1 103 PRO n 1 104 GLN n 1 105 VAL n 1 106 GLN n 1 107 SER n 1 108 TYR n 1 109 ASN n 1 110 VAL n 1 111 GLN n 1 112 VAL n 1 113 ALA n 1 114 THR n 1 115 THR n 1 116 ASP n 1 117 TYR n 1 118 ASN n 1 119 GLN n 1 120 PHE n 1 121 ALA n 1 122 MET n 1 123 VAL n 1 124 PHE n 1 125 PHE n 1 126 ARG n 1 127 LYS n 1 128 THR n 1 129 SER n 1 130 GLU n 1 131 ASN n 1 132 LYS n 1 133 GLN n 1 134 TYR n 1 135 PHE n 1 136 LYS n 1 137 ILE n 1 138 THR n 1 139 LEU n 1 140 TYR n 1 141 GLY n 1 142 ARG n 1 143 THR n 1 144 LYS n 1 145 GLU n 1 146 LEU n 1 147 SER n 1 148 PRO n 1 149 GLU n 1 150 LEU n 1 151 LYS n 1 152 GLU n 1 153 ARG n 1 154 PHE n 1 155 THR n 1 156 ARG n 1 157 PHE n 1 158 ALA n 1 159 LYS n 1 160 SER n 1 161 LEU n 1 162 GLY n 1 163 LEU n 1 164 LYS n 1 165 ASP n 1 166 ASP n 1 167 ASN n 1 168 ILE n 1 169 ILE n 1 170 PHE n 1 171 SER n 1 172 VAL n 1 173 PRO n 1 174 THR n 1 175 ASP n 1 176 GLN n 1 177 CYS n 1 178 ILE n 1 179 ASP n 1 180 ASN n 1 181 SER n 1 182 ALA n 1 183 TRP n 1 184 SER n 1 185 HIS n 1 186 PRO n 1 187 GLN n 1 188 PHE n 1 189 GLU n 1 190 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Lcn2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo Sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293F _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NGAL_MOUSE _struct_ref.pdbx_db_accession P11672 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QDSTQNLIPAPSLLTVPLQPDFRSDQFRGRWYVVGLAGNAVQKKTEGSFTMYSTIYELQENNSYNVTSILVRDQDQGCRY WIRTFVPSSRAGQFTLGNMHRYPQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKS LGLKDDNIIFSVPTDQCIDN ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S26 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11672 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 200 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S26 SER A 181 ? UNP P11672 ? ? 'expression tag' 181 1 1 3S26 ALA A 182 ? UNP P11672 ? ? 'expression tag' 182 2 1 3S26 TRP A 183 ? UNP P11672 ? ? 'expression tag' 183 3 1 3S26 SER A 184 ? UNP P11672 ? ? 'expression tag' 184 4 1 3S26 HIS A 185 ? UNP P11672 ? ? 'expression tag' 185 5 1 3S26 PRO A 186 ? UNP P11672 ? ? 'expression tag' 186 6 1 3S26 GLN A 187 ? UNP P11672 ? ? 'expression tag' 187 7 1 3S26 PHE A 188 ? UNP P11672 ? ? 'expression tag' 188 8 1 3S26 GLU A 189 ? UNP P11672 ? ? 'expression tag' 189 9 1 3S26 LYS A 190 ? UNP P11672 ? ? 'expression tag' 190 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3S26 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M HEPES, 20% PEG 4000, 10% isopropanol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(220) Asymmetric cut single crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3S26 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 42.890 _reflns.d_resolution_high 1.800 _reflns.number_obs 18574 _reflns.number_all 18585 _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.700 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.870 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 1.800 1.860 100.000 0.426 ? 3.500 7.090 ? ? ? ? ? ? 1 2 1.860 1.940 100.000 0.306 ? 4.600 7.080 ? ? ? ? ? ? 1 3 1.940 2.030 100.000 0.220 ? 6.200 7.070 ? ? ? ? ? ? 1 4 2.030 2.130 99.900 0.167 ? 8.000 7.010 ? ? ? ? ? ? 1 5 2.130 2.270 100.000 0.128 ? 10.100 6.980 ? ? ? ? ? ? 1 6 2.270 2.440 99.800 0.105 ? 11.900 6.970 ? ? ? ? ? ? 1 7 2.440 2.690 100.000 0.077 ? 15.100 6.870 ? ? ? ? ? ? 1 8 2.690 3.080 99.900 0.069 ? 18.700 6.780 ? ? ? ? ? ? 1 9 3.080 3.880 99.900 0.048 ? 26.200 6.540 ? ? ? ? ? ? 1 10 3.880 42.890 99.800 0.030 ? 43.200 6.390 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3S26 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17592 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.53 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.76 _refine.ls_R_factor_obs 0.20216 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20085 _refine.ls_R_factor_R_free 0.22605 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 948 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.B_iso_mean 37.502 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.131 _refine.pdbx_overall_ESU_R_Free 0.120 _refine.overall_SU_ML 0.089 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.329 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1341 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1480 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 39.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1428 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 964 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.495 1.986 ? 1942 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.829 3.000 ? 2327 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.094 5.000 ? 166 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.602 22.951 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.600 15.000 ? 221 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.979 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.066 0.200 ? 226 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.021 ? 1528 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 308 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.993 2.000 ? 842 'X-RAY DIFFRACTION' ? r_mcbond_other 0.638 2.000 ? 337 'X-RAY DIFFRACTION' ? r_mcangle_it 3.213 3.000 ? 1363 'X-RAY DIFFRACTION' ? r_scbond_it 4.211 4.000 ? 586 'X-RAY DIFFRACTION' ? r_scangle_it 6.326 6.000 ? 579 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 1297 _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.288 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3S26 _struct.title 'Crystal Structure of Murine Siderocalin (Lipocalin 2, 24p3)' _struct.pdbx_descriptor 'Neutrophil gelatinase-associated lipocalin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S26 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'Beta-Barrel, Siderophore binding protein, N-Linked glycosylation, Secreted, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 98 ? TYR A 102 ? ASN A 98 TYR A 102 5 ? 5 HELX_P HELX_P2 2 SER A 147 ? LEU A 161 ? SER A 147 LEU A 161 1 ? 15 HELX_P HELX_P3 3 LYS A 164 ? ASP A 166 ? LYS A 164 ASP A 166 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 78 SG ? ? ? 1_555 A CYS 177 SG ? ? A CYS 78 A CYS 177 1_555 ? ? ? ? ? ? ? 2.047 ? ? covale1 covale one ? A ASN 65 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 65 B NAG 1 1_555 ? ? ? ? ? ? ? 1.462 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale3 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale4 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.458 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 11 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 49 ? THR A 50 ? PHE A 49 THR A 50 A 2 ILE A 168 ? VAL A 172 ? ILE A 168 VAL A 172 A 3 GLY A 29 ? GLY A 38 ? GLY A 29 GLY A 38 A 4 LYS A 132 ? GLY A 141 ? LYS A 132 GLY A 141 A 5 PHE A 120 ? SER A 129 ? PHE A 120 SER A 129 A 6 VAL A 105 ? THR A 115 ? VAL A 105 THR A 115 A 7 GLN A 93 ? LEU A 96 ? GLN A 93 LEU A 96 A 8 ARG A 79 ? PRO A 87 ? ARG A 79 PRO A 87 A 9 TYR A 64 ? LEU A 70 ? TYR A 64 LEU A 70 A 10 SER A 53 ? LEU A 58 ? SER A 53 LEU A 58 A 11 GLY A 29 ? GLY A 38 ? GLY A 29 GLY A 38 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 49 ? N PHE A 49 O VAL A 172 ? O VAL A 172 A 2 3 O ILE A 169 ? O ILE A 169 N LEU A 36 ? N LEU A 36 A 3 4 N ALA A 37 ? N ALA A 37 O ILE A 137 ? O ILE A 137 A 4 5 O LYS A 136 ? O LYS A 136 N PHE A 125 ? N PHE A 125 A 5 6 O PHE A 124 ? O PHE A 124 N GLN A 111 ? N GLN A 111 A 6 7 O VAL A 110 ? O VAL A 110 N PHE A 94 ? N PHE A 94 A 7 8 O THR A 95 ? O THR A 95 N VAL A 86 ? N VAL A 86 A 8 9 O ARG A 83 ? O ARG A 83 N VAL A 66 ? N VAL A 66 A 9 10 O THR A 67 ? O THR A 67 N ILE A 55 ? N ILE A 55 A 10 11 O TYR A 56 ? O TYR A 56 N GLY A 29 ? N GLY A 29 # _atom_sites.entry_id 3S26 _atom_sites.fract_transf_matrix[1][1] 0.023315 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022748 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009812 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 GLN 5 5 ? ? ? A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 THR 45 45 ? ? ? A . n A 1 46 GLU 46 46 ? ? ? A . n A 1 47 GLY 47 47 ? ? ? A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ASP 73 73 ? ? ? A . n A 1 74 GLN 74 74 ? ? ? A . n A 1 75 ASP 75 75 ? ? ? A . n A 1 76 GLN 76 76 ? ? ? A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 CYS 78 78 78 CYS CYS A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 TRP 81 81 81 TRP TRP A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 MET 122 122 122 MET MET A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 GLN 133 133 133 GLN GLN A . n A 1 134 TYR 134 134 134 TYR TYR A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 ARG 153 153 153 ARG ARG A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 PHE 157 157 157 PHE PHE A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 ASN 167 167 167 ASN ASN A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 PHE 170 170 170 PHE PHE A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 THR 174 174 174 THR THR A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 GLN 176 176 176 GLN GLN A . n A 1 177 CYS 177 177 177 CYS CYS A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 ALA 182 182 ? ? ? A . n A 1 183 TRP 183 183 ? ? ? A . n A 1 184 SER 184 184 ? ? ? A . n A 1 185 HIS 185 185 ? ? ? A . n A 1 186 PRO 186 186 ? ? ? A . n A 1 187 GLN 187 187 ? ? ? A . n A 1 188 PHE 188 188 ? ? ? A . n A 1 189 GLU 189 189 ? ? ? A . n A 1 190 LYS 190 190 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 195 195 HOH HOH A . C 3 HOH 2 196 196 HOH HOH A . C 3 HOH 3 197 197 HOH HOH A . C 3 HOH 4 198 198 HOH HOH A . C 3 HOH 5 200 200 HOH HOH A . C 3 HOH 6 201 201 HOH HOH A . C 3 HOH 7 202 202 HOH HOH A . C 3 HOH 8 203 203 HOH HOH A . C 3 HOH 9 204 204 HOH HOH A . C 3 HOH 10 205 205 HOH HOH A . C 3 HOH 11 206 206 HOH HOH A . C 3 HOH 12 207 207 HOH HOH A . C 3 HOH 13 208 208 HOH HOH A . C 3 HOH 14 209 209 HOH HOH A . C 3 HOH 15 210 210 HOH HOH A . C 3 HOH 16 211 211 HOH HOH A . C 3 HOH 17 212 212 HOH HOH A . C 3 HOH 18 213 213 HOH HOH A . C 3 HOH 19 214 214 HOH HOH A . C 3 HOH 20 216 216 HOH HOH A . C 3 HOH 21 217 217 HOH HOH A . C 3 HOH 22 218 218 HOH HOH A . C 3 HOH 23 219 219 HOH HOH A . C 3 HOH 24 220 220 HOH HOH A . C 3 HOH 25 221 221 HOH HOH A . C 3 HOH 26 223 223 HOH HOH A . C 3 HOH 27 224 224 HOH HOH A . C 3 HOH 28 225 225 HOH HOH A . C 3 HOH 29 226 226 HOH HOH A . C 3 HOH 30 228 228 HOH HOH A . C 3 HOH 31 229 229 HOH HOH A . C 3 HOH 32 230 230 HOH HOH A . C 3 HOH 33 231 231 HOH HOH A . C 3 HOH 34 232 232 HOH HOH A . C 3 HOH 35 233 233 HOH HOH A . C 3 HOH 36 234 234 HOH HOH A . C 3 HOH 37 235 235 HOH HOH A . C 3 HOH 38 236 236 HOH HOH A . C 3 HOH 39 237 237 HOH HOH A . C 3 HOH 40 238 238 HOH HOH A . C 3 HOH 41 239 239 HOH HOH A . C 3 HOH 42 240 240 HOH HOH A . C 3 HOH 43 241 241 HOH HOH A . C 3 HOH 44 242 242 HOH HOH A . C 3 HOH 45 244 244 HOH HOH A . C 3 HOH 46 245 245 HOH HOH A . C 3 HOH 47 246 246 HOH HOH A . C 3 HOH 48 247 247 HOH HOH A . C 3 HOH 49 248 248 HOH HOH A . C 3 HOH 50 249 249 HOH HOH A . C 3 HOH 51 250 250 HOH HOH A . C 3 HOH 52 251 251 HOH HOH A . C 3 HOH 53 252 252 HOH HOH A . C 3 HOH 54 253 253 HOH HOH A . C 3 HOH 55 254 254 HOH HOH A . C 3 HOH 56 255 255 HOH HOH A . C 3 HOH 57 257 257 HOH HOH A . C 3 HOH 58 258 258 HOH HOH A . C 3 HOH 59 259 259 HOH HOH A . C 3 HOH 60 262 262 HOH HOH A . C 3 HOH 61 263 263 HOH HOH A . C 3 HOH 62 265 265 HOH HOH A . C 3 HOH 63 266 266 HOH HOH A . C 3 HOH 64 267 267 HOH HOH A . C 3 HOH 65 268 268 HOH HOH A . C 3 HOH 66 269 269 HOH HOH A . C 3 HOH 67 270 270 HOH HOH A . C 3 HOH 68 271 271 HOH HOH A . C 3 HOH 69 272 272 HOH HOH A . C 3 HOH 70 273 273 HOH HOH A . C 3 HOH 71 274 274 HOH HOH A . C 3 HOH 72 276 276 HOH HOH A . C 3 HOH 73 277 277 HOH HOH A . C 3 HOH 74 278 278 HOH HOH A . C 3 HOH 75 279 279 HOH HOH A . C 3 HOH 76 280 280 HOH HOH A . C 3 HOH 77 281 281 HOH HOH A . C 3 HOH 78 282 282 HOH HOH A . C 3 HOH 79 283 283 HOH HOH A . C 3 HOH 80 284 284 HOH HOH A . C 3 HOH 81 285 285 HOH HOH A . C 3 HOH 82 287 287 HOH HOH A . C 3 HOH 83 288 288 HOH HOH A . C 3 HOH 84 289 289 HOH HOH A . C 3 HOH 85 291 291 HOH HOH A . C 3 HOH 86 293 293 HOH HOH A . C 3 HOH 87 295 295 HOH HOH A . C 3 HOH 88 296 296 HOH HOH A . C 3 HOH 89 300 300 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 65 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 65 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-28 2 'Structure model' 1 1 2011-12-07 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2021-03-31 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Source and taxonomy' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' atom_site_anisotrop 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_ref_seq_dif 17 3 'Structure model' struct_site 18 3 'Structure model' struct_site_gen 19 4 'Structure model' chem_comp 20 4 'Structure model' entity_src_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_atom_site.label_entity_id' 5 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 6 3 'Structure model' '_chem_comp.name' 7 3 'Structure model' '_chem_comp.type' 8 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 9 3 'Structure model' '_struct_conn.pdbx_dist_value' 10 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 3 'Structure model' '_struct_conn.pdbx_role' 12 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 3 'Structure model' '_struct_ref_seq_dif.details' 25 4 'Structure model' '_chem_comp.pdbx_synonyms' 26 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 27 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 1.7609 _pdbx_refine_tls.origin_y -2.6770 _pdbx_refine_tls.origin_z -12.4880 _pdbx_refine_tls.T[1][1] 0.1696 _pdbx_refine_tls.T[2][2] 0.1847 _pdbx_refine_tls.T[3][3] 0.1844 _pdbx_refine_tls.T[1][2] 0.0313 _pdbx_refine_tls.T[1][3] 0.0104 _pdbx_refine_tls.T[2][3] 0.0263 _pdbx_refine_tls.L[1][1] 1.2884 _pdbx_refine_tls.L[2][2] 1.6022 _pdbx_refine_tls.L[3][3] 1.8132 _pdbx_refine_tls.L[1][2] 0.7274 _pdbx_refine_tls.L[1][3] 0.5920 _pdbx_refine_tls.L[2][3] -0.0189 _pdbx_refine_tls.S[1][1] 0.0236 _pdbx_refine_tls.S[1][2] 0.1097 _pdbx_refine_tls.S[1][3] 0.0991 _pdbx_refine_tls.S[2][1] 0.0988 _pdbx_refine_tls.S[2][2] -0.0018 _pdbx_refine_tls.S[2][3] 0.0270 _pdbx_refine_tls.S[3][1] 0.0376 _pdbx_refine_tls.S[3][2] 0.0787 _pdbx_refine_tls.S[3][3] -0.0218 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 6 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 181 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 d*TREK 9.9.3D 'Nov 12 2008' package 'Jim W. Pflugrath' Jim.Pflugrath@Rigaku.com 'data reduction' http://www.rigaku.com/software/dtrek.html ? ? 2 REFMAC 5.5.0072 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 d*TREK . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 88 ? ? -107.77 -158.16 2 1 TYR A 117 ? ? 68.15 -36.80 3 1 GLN A 119 ? ? -135.58 -62.32 4 1 ASN A 131 ? ? 57.33 19.49 5 1 CYS A 177 ? ? 74.73 -49.57 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 6 ? CG ? A ASN 6 CG 2 1 Y 1 A ASN 6 ? OD1 ? A ASN 6 OD1 3 1 Y 1 A ASN 6 ? ND2 ? A ASN 6 ND2 4 1 Y 1 A ARG 23 ? NE ? A ARG 23 NE 5 1 Y 1 A ARG 23 ? CZ ? A ARG 23 CZ 6 1 Y 1 A ARG 23 ? NH1 ? A ARG 23 NH1 7 1 Y 1 A ARG 23 ? NH2 ? A ARG 23 NH2 8 1 Y 1 A GLN 42 ? CG ? A GLN 42 CG 9 1 Y 1 A GLN 42 ? CD ? A GLN 42 CD 10 1 Y 1 A GLN 42 ? OE1 ? A GLN 42 OE1 11 1 Y 1 A GLN 42 ? NE2 ? A GLN 42 NE2 12 1 Y 1 A LYS 44 ? CD ? A LYS 44 CD 13 1 Y 1 A LYS 44 ? CE ? A LYS 44 CE 14 1 Y 1 A LYS 44 ? NZ ? A LYS 44 NZ 15 1 Y 1 A GLU 57 ? CD ? A GLU 57 CD 16 1 Y 1 A GLU 57 ? OE1 ? A GLU 57 OE1 17 1 Y 1 A GLU 57 ? OE2 ? A GLU 57 OE2 18 1 Y 1 A GLU 60 ? CG ? A GLU 60 CG 19 1 Y 1 A GLU 60 ? CD ? A GLU 60 CD 20 1 Y 1 A GLU 60 ? OE1 ? A GLU 60 OE1 21 1 Y 1 A GLU 60 ? OE2 ? A GLU 60 OE2 22 1 Y 1 A ARG 79 ? NE ? A ARG 79 NE 23 1 Y 1 A ARG 79 ? CZ ? A ARG 79 CZ 24 1 Y 1 A ARG 79 ? NH1 ? A ARG 79 NH1 25 1 Y 1 A ARG 79 ? NH2 ? A ARG 79 NH2 26 1 Y 1 A SER 89 ? OG ? A SER 89 OG 27 1 Y 1 A GLN 104 ? CG ? A GLN 104 CG 28 1 Y 1 A GLN 104 ? CD ? A GLN 104 CD 29 1 Y 1 A GLN 104 ? OE1 ? A GLN 104 OE1 30 1 Y 1 A GLN 104 ? NE2 ? A GLN 104 NE2 31 1 Y 1 A ARG 126 ? NE ? A ARG 126 NE 32 1 Y 1 A ARG 126 ? CZ ? A ARG 126 CZ 33 1 Y 1 A ARG 126 ? NH1 ? A ARG 126 NH1 34 1 Y 1 A ARG 126 ? NH2 ? A ARG 126 NH2 35 1 Y 1 A GLU 130 ? CD ? A GLU 130 CD 36 1 Y 1 A GLU 130 ? OE1 ? A GLU 130 OE1 37 1 Y 1 A GLU 130 ? OE2 ? A GLU 130 OE2 38 1 Y 1 A ASN 131 ? CG ? A ASN 131 CG 39 1 Y 1 A ASN 131 ? OD1 ? A ASN 131 OD1 40 1 Y 1 A ASN 131 ? ND2 ? A ASN 131 ND2 41 1 Y 1 A LYS 132 ? CE ? A LYS 132 CE 42 1 Y 1 A LYS 132 ? NZ ? A LYS 132 NZ 43 1 Y 1 A GLU 149 ? CD ? A GLU 149 CD 44 1 Y 1 A GLU 149 ? OE1 ? A GLU 149 OE1 45 1 Y 1 A GLU 149 ? OE2 ? A GLU 149 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A GLN 5 ? A GLN 5 6 1 Y 1 A THR 45 ? A THR 45 7 1 Y 1 A GLU 46 ? A GLU 46 8 1 Y 1 A GLY 47 ? A GLY 47 9 1 Y 1 A ASP 73 ? A ASP 73 10 1 Y 1 A GLN 74 ? A GLN 74 11 1 Y 1 A ASP 75 ? A ASP 75 12 1 Y 1 A GLN 76 ? A GLN 76 13 1 Y 1 A ALA 182 ? A ALA 182 14 1 Y 1 A TRP 183 ? A TRP 183 15 1 Y 1 A SER 184 ? A SER 184 16 1 Y 1 A HIS 185 ? A HIS 185 17 1 Y 1 A PRO 186 ? A PRO 186 18 1 Y 1 A GLN 187 ? A GLN 187 19 1 Y 1 A PHE 188 ? A PHE 188 20 1 Y 1 A GLU 189 ? A GLU 189 21 1 Y 1 A LYS 190 ? A LYS 190 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 191 n B 2 NAG 2 B NAG 2 A NAG 192 n B 2 BMA 3 B BMA 3 A BMA 193 n B 2 MAN 4 B MAN 4 A MAN 194 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #