data_3S5Q # _entry.id 3S5Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3S5Q RCSB RCSB065794 WWPDB D_1000065794 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394767 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3S5Q _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a Hypothetical Glycosyl hydrolase (BDI_2473) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 # _cell.entry_id 3S5Q _cell.length_a 41.062 _cell.length_b 60.473 _cell.length_c 77.221 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S5Q _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative glycosylhydrolase' 24742.064 1 ? ? 'sequence database residues 29-223' ? 2 non-polymer syn 'IODIDE ION' 126.904 3 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 4 water nat water 18.015 187 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQGYRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTDVNTNS GVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNR(MSE)IITAKGQQIDIELN GKHIVSANLADWTSGTTNPDGTEIPEWLPIPYAN(MSE)PTKGYIGLQGKHGESNIWFRNIQLKQL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGYRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTDVNTNSGVVI YCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIELNGKHIVSAN LADWTSGTTNPDGTEIPEWLPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 394767 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 TYR n 1 21 ARG n 1 22 PRO n 1 23 LEU n 1 24 PHE n 1 25 ASP n 1 26 LYS n 1 27 ASP n 1 28 LEU n 1 29 SER n 1 30 ASN n 1 31 ALA n 1 32 ASP n 1 33 TYR n 1 34 ASP n 1 35 SER n 1 36 SER n 1 37 VAL n 1 38 TRP n 1 39 THR n 1 40 PHE n 1 41 LYS n 1 42 ASN n 1 43 GLY n 1 44 ILE n 1 45 LEU n 1 46 THR n 1 47 ALA n 1 48 THR n 1 49 ALA n 1 50 ASP n 1 51 GLN n 1 52 SER n 1 53 ILE n 1 54 TRP n 1 55 THR n 1 56 LYS n 1 57 VAL n 1 58 GLN n 1 59 TYR n 1 60 GLU n 1 61 ASN n 1 62 PHE n 1 63 ILE n 1 64 LEU n 1 65 ASP n 1 66 LEU n 1 67 GLU n 1 68 PHE n 1 69 LYS n 1 70 THR n 1 71 ASP n 1 72 VAL n 1 73 ASN n 1 74 THR n 1 75 ASN n 1 76 SER n 1 77 GLY n 1 78 VAL n 1 79 VAL n 1 80 ILE n 1 81 TYR n 1 82 CYS n 1 83 THR n 1 84 ASP n 1 85 LYS n 1 86 GLY n 1 87 ASN n 1 88 TRP n 1 89 ILE n 1 90 PRO n 1 91 SER n 1 92 SER n 1 93 ILE n 1 94 GLU n 1 95 ILE n 1 96 GLN n 1 97 ILE n 1 98 ALA n 1 99 ASP n 1 100 ASP n 1 101 HIS n 1 102 HIS n 1 103 PRO n 1 104 GLU n 1 105 TRP n 1 106 GLN n 1 107 SER n 1 108 TYR n 1 109 PRO n 1 110 GLU n 1 111 TYR n 1 112 TRP n 1 113 ARG n 1 114 CYS n 1 115 GLY n 1 116 SER n 1 117 ILE n 1 118 TYR n 1 119 GLY n 1 120 HIS n 1 121 LYS n 1 122 GLY n 1 123 ALA n 1 124 ASN n 1 125 GLU n 1 126 GLN n 1 127 LEU n 1 128 VAL n 1 129 VAL n 1 130 LYS n 1 131 LYS n 1 132 PRO n 1 133 GLY n 1 134 GLU n 1 135 TRP n 1 136 ASN n 1 137 ARG n 1 138 MSE n 1 139 ILE n 1 140 ILE n 1 141 THR n 1 142 ALA n 1 143 LYS n 1 144 GLY n 1 145 GLN n 1 146 GLN n 1 147 ILE n 1 148 ASP n 1 149 ILE n 1 150 GLU n 1 151 LEU n 1 152 ASN n 1 153 GLY n 1 154 LYS n 1 155 HIS n 1 156 ILE n 1 157 VAL n 1 158 SER n 1 159 ALA n 1 160 ASN n 1 161 LEU n 1 162 ALA n 1 163 ASP n 1 164 TRP n 1 165 THR n 1 166 SER n 1 167 GLY n 1 168 THR n 1 169 THR n 1 170 ASN n 1 171 PRO n 1 172 ASP n 1 173 GLY n 1 174 THR n 1 175 GLU n 1 176 ILE n 1 177 PRO n 1 178 GLU n 1 179 TRP n 1 180 LEU n 1 181 PRO n 1 182 ILE n 1 183 PRO n 1 184 TYR n 1 185 ALA n 1 186 ASN n 1 187 MSE n 1 188 PRO n 1 189 THR n 1 190 LYS n 1 191 GLY n 1 192 TYR n 1 193 ILE n 1 194 GLY n 1 195 LEU n 1 196 GLN n 1 197 GLY n 1 198 LYS n 1 199 HIS n 1 200 GLY n 1 201 GLU n 1 202 SER n 1 203 ASN n 1 204 ILE n 1 205 TRP n 1 206 PHE n 1 207 ARG n 1 208 ASN n 1 209 ILE n 1 210 GLN n 1 211 LEU n 1 212 LYS n 1 213 GLN n 1 214 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_2473 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503 / DSM 20701 / NCTC 11152' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LES9_PARD8 _struct_ref.pdbx_db_accession A6LES9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIAD DHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIELNGKHIVSANLADWTSGTTNPDGTEIPEW LPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S5Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 214 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6LES9 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 29 _struct_ref_seq.pdbx_auth_seq_align_end 223 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S5Q MSE A 1 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -18 1 1 3S5Q GLY A 2 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -17 2 1 3S5Q SER A 3 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -16 3 1 3S5Q ASP A 4 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -15 4 1 3S5Q LYS A 5 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -14 5 1 3S5Q ILE A 6 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -13 6 1 3S5Q HIS A 7 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -12 7 1 3S5Q HIS A 8 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -11 8 1 3S5Q HIS A 9 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -10 9 1 3S5Q HIS A 10 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -9 10 1 3S5Q HIS A 11 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -8 11 1 3S5Q HIS A 12 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -7 12 1 3S5Q GLU A 13 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -6 13 1 3S5Q ASN A 14 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -5 14 1 3S5Q LEU A 15 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -4 15 1 3S5Q TYR A 16 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -3 16 1 3S5Q PHE A 17 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -2 17 1 3S5Q GLN A 18 ? UNP A6LES9 ? ? 'EXPRESSION TAG' -1 18 1 3S5Q GLY A 19 ? UNP A6LES9 ? ? 'EXPRESSION TAG' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3S5Q # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 36.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.200M NH4I, 20.00% PEG-3350, No Buffer pH 6.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (ho rizontal focusing)' _diffrn_detector.pdbx_collection_date 2009-07-07 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97954 1.0 2 0.91837 1.0 3 0.97874 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97954,0.91837,0.97874 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3S5Q _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 36.250 _reflns.number_obs 16569 _reflns.pdbx_Rmerge_I_obs 0.097 _reflns.pdbx_netI_over_sigmaI 11.410 _reflns.percent_possible_obs 97.100 _reflns.B_iso_Wilson_estimate 20.250 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 3.98 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.850 1.920 6715 ? 1684 0.683 2.1 ? ? 3.99 ? ? 96.100 1 1 1.920 1.990 5932 ? 1469 0.521 2.8 ? ? ? ? ? 96.300 2 1 1.990 2.080 6565 ? 1629 0.374 3.8 ? ? ? ? ? 96.700 3 1 2.080 2.190 6587 ? 1623 0.300 4.7 ? ? ? ? ? 96.800 4 1 2.190 2.330 6740 ? 1664 0.239 5.9 ? ? ? ? ? 96.800 5 1 2.330 2.510 6698 ? 1658 0.176 7.7 ? ? ? ? ? 97.600 6 1 2.510 2.760 6652 ? 1657 0.129 10.2 ? ? ? ? ? 97.500 7 1 2.760 3.160 6712 ? 1678 0.079 15.3 ? ? ? ? ? 98.200 8 1 3.160 3.980 6647 ? 1691 0.042 25.8 ? ? ? ? ? 97.600 9 1 3.980 36.250 6742 ? 1816 0.033 32.3 ? ? ? ? ? 97.300 10 1 # _refine.entry_id 3S5Q _refine.ls_d_res_high 1.8500 _refine.ls_d_res_low 36.250 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.2600 _refine.ls_number_reflns_obs 16554 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. ANOMALOUS DIFFERENCE FOURIERS SUPPORT THE MODELING OF IODIDE (IOD) IONS. 6. 1,2-ETHANEDIOL (EDO) MOLECULES FROM THE CRYOPROTECTION SOLUTION ARE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1711 _refine.ls_R_factor_R_work 0.1693 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2018 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.2000 _refine.ls_number_reflns_R_free 854 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 25.9466 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 2.3800 _refine.aniso_B[2][2] -1.4300 _refine.aniso_B[3][3] -0.9400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9620 _refine.correlation_coeff_Fo_to_Fc_free 0.9450 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1360 _refine.overall_SU_ML 0.1000 _refine.overall_SU_B 5.5880 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 60.500 _refine.B_iso_min 12.680 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.162 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1728 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 1942 _refine_hist.d_res_high 1.8500 _refine_hist.d_res_low 36.250 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1831 0.017 0.021 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1225 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2491 1.529 1.917 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2996 0.895 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 224 6.822 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 92 36.407 25.217 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 295 13.653 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 4 13.915 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 257 0.093 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2046 0.007 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 361 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1076 0.764 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 438 0.221 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1750 1.289 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 755 2.162 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 735 3.214 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.8500 _refine_ls_shell.d_res_low 1.8980 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.8300 _refine_ls_shell.number_reflns_R_work 1128 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2590 _refine_ls_shell.R_factor_R_free 0.2930 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1196 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S5Q _struct.title 'Crystal structure of a putative glycosyl hydrolase (BDI_2473) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution' _struct.pdbx_descriptor 'Putative glycosylhydrolase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Concanavalin A-like lectins/glucanases, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3S5Q # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? GLN A 18 ? ASN A -5 GLN A -1 5 ? 5 HELX_P HELX_P2 2 TRP A 88 ? SER A 92 ? TRP A 97 SER A 101 5 ? 5 HELX_P HELX_P3 3 HIS A 102 ? TYR A 108 ? HIS A 111 TYR A 117 5 ? 7 HELX_P HELX_P4 4 PRO A 109 ? ARG A 113 ? PRO A 118 ARG A 122 5 ? 5 HELX_P HELX_P5 5 ALA A 162 ? TRP A 164 ? ALA A 171 TRP A 173 5 ? 3 HELX_P HELX_P6 6 PRO A 183 ? MSE A 187 ? PRO A 192 MSE A 196 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 137 C ? ? ? 1_555 A MSE 138 N ? ? A ARG 146 A MSE 147 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 138 C ? ? ? 1_555 A ILE 139 N ? ? A MSE 147 A ILE 148 1_555 ? ? ? ? ? ? ? 1.323 ? covale3 covale ? ? A ASN 186 C ? ? ? 1_555 A MSE 187 N ? ? A ASN 195 A MSE 196 1_555 ? ? ? ? ? ? ? 1.337 ? covale4 covale ? ? A MSE 187 C ? ? ? 1_555 A PRO 188 N ? ? A MSE 196 A PRO 197 1_555 ? ? ? ? ? ? ? 1.358 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 20 ? PRO A 22 ? TYR A 29 PRO A 31 A 2 ILE A 204 ? GLN A 213 ? ILE A 213 GLN A 222 A 3 ILE A 44 ? ALA A 47 ? ILE A 53 ALA A 56 A 4 TRP A 38 ? LYS A 41 ? TRP A 47 LYS A 50 B 1 TYR A 20 ? PRO A 22 ? TYR A 29 PRO A 31 B 2 ILE A 204 ? GLN A 213 ? ILE A 213 GLN A 222 B 3 PHE A 62 ? THR A 70 ? PHE A 71 THR A 79 B 4 TRP A 135 ? LYS A 143 ? TRP A 144 LYS A 152 B 5 GLN A 146 ? LEU A 151 ? GLN A 155 LEU A 160 B 6 LYS A 154 ? ASN A 160 ? LYS A 163 ASN A 169 C 1 ALA A 31 ? ASP A 32 ? ALA A 40 ASP A 41 C 2 ILE A 53 ? THR A 55 ? ILE A 62 THR A 64 C 3 TYR A 192 ? LEU A 195 ? TYR A 201 LEU A 204 C 4 ASN A 75 ? CYS A 82 ? ASN A 84 CYS A 91 C 5 ILE A 93 ? ALA A 98 ? ILE A 102 ALA A 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 21 ? N ARG A 30 O LEU A 211 ? O LEU A 220 A 2 3 O PHE A 206 ? O PHE A 215 N LEU A 45 ? N LEU A 54 A 3 4 O THR A 46 ? O THR A 55 N THR A 39 ? N THR A 48 B 1 2 N ARG A 21 ? N ARG A 30 O LEU A 211 ? O LEU A 220 B 2 3 O GLN A 210 ? O GLN A 219 N ASP A 65 ? N ASP A 74 B 3 4 N LEU A 64 ? N LEU A 73 O ILE A 140 ? O ILE A 149 B 4 5 N THR A 141 ? N THR A 150 O ASP A 148 ? O ASP A 157 B 5 6 N ILE A 147 ? N ILE A 156 O ALA A 159 ? O ALA A 168 C 1 2 N ASP A 32 ? N ASP A 41 O TRP A 54 ? O TRP A 63 C 2 3 N THR A 55 ? N THR A 64 O ILE A 193 ? O ILE A 202 C 3 4 O GLY A 194 ? O GLY A 203 N VAL A 79 ? N VAL A 88 C 4 5 N VAL A 78 ? N VAL A 87 O ILE A 95 ? O ILE A 104 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD A 300' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 301' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 302' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 303' AC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 304' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 305' AC7 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 306' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 307' AC9 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 308' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 8 ? HIS A -11 . ? 1_555 ? 2 AC1 3 ASN A 75 ? ASN A 84 . ? 3_756 ? 3 AC1 3 TYR A 118 ? TYR A 127 . ? 3_756 ? 4 AC2 1 GLU A 175 ? GLU A 184 . ? 1_555 ? 5 AC3 1 HIS A 12 ? HIS A -7 . ? 1_555 ? 6 AC4 4 LYS A 121 ? LYS A 130 . ? 1_555 ? 7 AC4 4 ASN A 124 ? ASN A 133 . ? 1_555 ? 8 AC4 4 SER A 158 ? SER A 167 . ? 1_555 ? 9 AC4 4 HOH K . ? HOH A 394 . ? 1_555 ? 10 AC5 7 ASN A 42 ? ASN A 51 . ? 2_664 ? 11 AC5 7 ASN A 170 ? ASN A 179 . ? 1_555 ? 12 AC5 7 PRO A 171 ? PRO A 180 . ? 1_555 ? 13 AC5 7 ASP A 172 ? ASP A 181 . ? 1_555 ? 14 AC5 7 HOH K . ? HOH A 450 . ? 1_555 ? 15 AC5 7 HOH K . ? HOH A 451 . ? 1_555 ? 16 AC5 7 HOH K . ? HOH A 452 . ? 1_555 ? 17 AC6 4 ILE A 6 ? ILE A -13 . ? 2_664 ? 18 AC6 4 THR A 165 ? THR A 174 . ? 1_555 ? 19 AC6 4 EDO H . ? EDO A 306 . ? 1_555 ? 20 AC6 4 HOH K . ? HOH A 340 . ? 1_555 ? 21 AC7 7 THR A 169 ? THR A 178 . ? 1_555 ? 22 AC7 7 ASN A 170 ? ASN A 179 . ? 1_555 ? 23 AC7 7 PRO A 171 ? PRO A 180 . ? 1_555 ? 24 AC7 7 ARG A 207 ? ARG A 216 . ? 2_664 ? 25 AC7 7 EDO G . ? EDO A 305 . ? 1_555 ? 26 AC7 7 HOH K . ? HOH A 319 . ? 1_555 ? 27 AC7 7 HOH K . ? HOH A 465 . ? 1_555 ? 28 AC8 6 LEU A 23 ? LEU A 32 . ? 1_555 ? 29 AC8 6 PHE A 24 ? PHE A 33 . ? 1_555 ? 30 AC8 6 PHE A 40 ? PHE A 49 . ? 1_555 ? 31 AC8 6 ASN A 208 ? ASN A 217 . ? 1_555 ? 32 AC8 6 ILE A 209 ? ILE A 218 . ? 1_555 ? 33 AC8 6 HOH K . ? HOH A 321 . ? 1_555 ? 34 AC9 6 VAL A 72 ? VAL A 81 . ? 1_455 ? 35 AC9 6 HIS A 102 ? HIS A 111 . ? 1_455 ? 36 AC9 6 THR A 189 ? THR A 198 . ? 1_555 ? 37 AC9 6 HOH K . ? HOH A 364 . ? 1_555 ? 38 AC9 6 HOH K . ? HOH A 370 . ? 1_555 ? 39 AC9 6 HOH K . ? HOH A 373 . ? 1_555 ? # _atom_sites.entry_id 3S5Q _atom_sites.fract_transf_matrix[1][1] 0.024354 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016536 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012950 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C I N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 -17 GLY GLY A . n A 1 3 SER 3 -16 -16 SER SER A . n A 1 4 ASP 4 -15 -15 ASP ASP A . n A 1 5 LYS 5 -14 -14 LYS LYS A . n A 1 6 ILE 6 -13 -13 ILE ILE A . n A 1 7 HIS 7 -12 -12 HIS HIS A . n A 1 8 HIS 8 -11 -11 HIS HIS A . n A 1 9 HIS 9 -10 -10 HIS HIS A . n A 1 10 HIS 10 -9 -9 HIS HIS A . n A 1 11 HIS 11 -8 -8 HIS HIS A . n A 1 12 HIS 12 -7 -7 HIS HIS A . n A 1 13 GLU 13 -6 -6 GLU GLU A . n A 1 14 ASN 14 -5 -5 ASN ASN A . n A 1 15 LEU 15 -4 -4 LEU LEU A . n A 1 16 TYR 16 -3 -3 TYR TYR A . n A 1 17 PHE 17 -2 -2 PHE PHE A . n A 1 18 GLN 18 -1 -1 GLN GLN A . n A 1 19 GLY 19 0 0 GLY GLY A . n A 1 20 TYR 20 29 29 TYR TYR A . n A 1 21 ARG 21 30 30 ARG ARG A . n A 1 22 PRO 22 31 31 PRO PRO A . n A 1 23 LEU 23 32 32 LEU LEU A . n A 1 24 PHE 24 33 33 PHE PHE A . n A 1 25 ASP 25 34 34 ASP ASP A . n A 1 26 LYS 26 35 35 LYS LYS A . n A 1 27 ASP 27 36 36 ASP ASP A . n A 1 28 LEU 28 37 37 LEU LEU A . n A 1 29 SER 29 38 38 SER SER A . n A 1 30 ASN 30 39 39 ASN ASN A . n A 1 31 ALA 31 40 40 ALA ALA A . n A 1 32 ASP 32 41 41 ASP ASP A . n A 1 33 TYR 33 42 42 TYR TYR A . n A 1 34 ASP 34 43 43 ASP ASP A . n A 1 35 SER 35 44 44 SER SER A . n A 1 36 SER 36 45 45 SER SER A . n A 1 37 VAL 37 46 46 VAL VAL A . n A 1 38 TRP 38 47 47 TRP TRP A . n A 1 39 THR 39 48 48 THR THR A . n A 1 40 PHE 40 49 49 PHE PHE A . n A 1 41 LYS 41 50 50 LYS LYS A . n A 1 42 ASN 42 51 51 ASN ASN A . n A 1 43 GLY 43 52 52 GLY GLY A . n A 1 44 ILE 44 53 53 ILE ILE A . n A 1 45 LEU 45 54 54 LEU LEU A . n A 1 46 THR 46 55 55 THR THR A . n A 1 47 ALA 47 56 56 ALA ALA A . n A 1 48 THR 48 57 57 THR THR A . n A 1 49 ALA 49 58 58 ALA ALA A . n A 1 50 ASP 50 59 59 ASP ASP A . n A 1 51 GLN 51 60 60 GLN GLN A . n A 1 52 SER 52 61 61 SER SER A . n A 1 53 ILE 53 62 62 ILE ILE A . n A 1 54 TRP 54 63 63 TRP TRP A . n A 1 55 THR 55 64 64 THR THR A . n A 1 56 LYS 56 65 65 LYS LYS A . n A 1 57 VAL 57 66 66 VAL VAL A . n A 1 58 GLN 58 67 67 GLN GLN A . n A 1 59 TYR 59 68 68 TYR TYR A . n A 1 60 GLU 60 69 69 GLU GLU A . n A 1 61 ASN 61 70 70 ASN ASN A . n A 1 62 PHE 62 71 71 PHE PHE A . n A 1 63 ILE 63 72 72 ILE ILE A . n A 1 64 LEU 64 73 73 LEU LEU A . n A 1 65 ASP 65 74 74 ASP ASP A . n A 1 66 LEU 66 75 75 LEU LEU A . n A 1 67 GLU 67 76 76 GLU GLU A . n A 1 68 PHE 68 77 77 PHE PHE A . n A 1 69 LYS 69 78 78 LYS LYS A . n A 1 70 THR 70 79 79 THR THR A . n A 1 71 ASP 71 80 80 ASP ASP A . n A 1 72 VAL 72 81 81 VAL VAL A . n A 1 73 ASN 73 82 82 ASN ASN A . n A 1 74 THR 74 83 83 THR THR A . n A 1 75 ASN 75 84 84 ASN ASN A . n A 1 76 SER 76 85 85 SER SER A . n A 1 77 GLY 77 86 86 GLY GLY A . n A 1 78 VAL 78 87 87 VAL VAL A . n A 1 79 VAL 79 88 88 VAL VAL A . n A 1 80 ILE 80 89 89 ILE ILE A . n A 1 81 TYR 81 90 90 TYR TYR A . n A 1 82 CYS 82 91 91 CYS CYS A . n A 1 83 THR 83 92 92 THR THR A . n A 1 84 ASP 84 93 93 ASP ASP A . n A 1 85 LYS 85 94 94 LYS LYS A . n A 1 86 GLY 86 95 95 GLY GLY A . n A 1 87 ASN 87 96 96 ASN ASN A . n A 1 88 TRP 88 97 97 TRP TRP A . n A 1 89 ILE 89 98 98 ILE ILE A . n A 1 90 PRO 90 99 99 PRO PRO A . n A 1 91 SER 91 100 100 SER SER A . n A 1 92 SER 92 101 101 SER SER A . n A 1 93 ILE 93 102 102 ILE ILE A . n A 1 94 GLU 94 103 103 GLU GLU A . n A 1 95 ILE 95 104 104 ILE ILE A . n A 1 96 GLN 96 105 105 GLN GLN A . n A 1 97 ILE 97 106 106 ILE ILE A . n A 1 98 ALA 98 107 107 ALA ALA A . n A 1 99 ASP 99 108 108 ASP ASP A . n A 1 100 ASP 100 109 109 ASP ASP A . n A 1 101 HIS 101 110 110 HIS HIS A . n A 1 102 HIS 102 111 111 HIS HIS A . n A 1 103 PRO 103 112 112 PRO PRO A . n A 1 104 GLU 104 113 113 GLU GLU A . n A 1 105 TRP 105 114 114 TRP TRP A . n A 1 106 GLN 106 115 115 GLN GLN A . n A 1 107 SER 107 116 116 SER SER A . n A 1 108 TYR 108 117 117 TYR TYR A . n A 1 109 PRO 109 118 118 PRO PRO A . n A 1 110 GLU 110 119 119 GLU GLU A . n A 1 111 TYR 111 120 120 TYR TYR A . n A 1 112 TRP 112 121 121 TRP TRP A . n A 1 113 ARG 113 122 122 ARG ARG A . n A 1 114 CYS 114 123 123 CYS CYS A . n A 1 115 GLY 115 124 124 GLY GLY A . n A 1 116 SER 116 125 125 SER SER A . n A 1 117 ILE 117 126 126 ILE ILE A . n A 1 118 TYR 118 127 127 TYR TYR A . n A 1 119 GLY 119 128 128 GLY GLY A . n A 1 120 HIS 120 129 129 HIS HIS A . n A 1 121 LYS 121 130 130 LYS LYS A . n A 1 122 GLY 122 131 131 GLY GLY A . n A 1 123 ALA 123 132 132 ALA ALA A . n A 1 124 ASN 124 133 133 ASN ASN A . n A 1 125 GLU 125 134 134 GLU GLU A . n A 1 126 GLN 126 135 135 GLN GLN A . n A 1 127 LEU 127 136 136 LEU LEU A . n A 1 128 VAL 128 137 137 VAL VAL A . n A 1 129 VAL 129 138 138 VAL VAL A . n A 1 130 LYS 130 139 139 LYS LYS A . n A 1 131 LYS 131 140 140 LYS LYS A . n A 1 132 PRO 132 141 141 PRO PRO A . n A 1 133 GLY 133 142 142 GLY GLY A . n A 1 134 GLU 134 143 143 GLU GLU A . n A 1 135 TRP 135 144 144 TRP TRP A . n A 1 136 ASN 136 145 145 ASN ASN A . n A 1 137 ARG 137 146 146 ARG ARG A . n A 1 138 MSE 138 147 147 MSE MSE A . n A 1 139 ILE 139 148 148 ILE ILE A . n A 1 140 ILE 140 149 149 ILE ILE A . n A 1 141 THR 141 150 150 THR THR A . n A 1 142 ALA 142 151 151 ALA ALA A . n A 1 143 LYS 143 152 152 LYS LYS A . n A 1 144 GLY 144 153 153 GLY GLY A . n A 1 145 GLN 145 154 154 GLN GLN A . n A 1 146 GLN 146 155 155 GLN GLN A . n A 1 147 ILE 147 156 156 ILE ILE A . n A 1 148 ASP 148 157 157 ASP ASP A . n A 1 149 ILE 149 158 158 ILE ILE A . n A 1 150 GLU 150 159 159 GLU GLU A . n A 1 151 LEU 151 160 160 LEU LEU A . n A 1 152 ASN 152 161 161 ASN ASN A . n A 1 153 GLY 153 162 162 GLY GLY A . n A 1 154 LYS 154 163 163 LYS LYS A . n A 1 155 HIS 155 164 164 HIS HIS A . n A 1 156 ILE 156 165 165 ILE ILE A . n A 1 157 VAL 157 166 166 VAL VAL A . n A 1 158 SER 158 167 167 SER SER A . n A 1 159 ALA 159 168 168 ALA ALA A . n A 1 160 ASN 160 169 169 ASN ASN A . n A 1 161 LEU 161 170 170 LEU LEU A . n A 1 162 ALA 162 171 171 ALA ALA A . n A 1 163 ASP 163 172 172 ASP ASP A . n A 1 164 TRP 164 173 173 TRP TRP A . n A 1 165 THR 165 174 174 THR THR A . n A 1 166 SER 166 175 175 SER SER A . n A 1 167 GLY 167 176 176 GLY GLY A . n A 1 168 THR 168 177 177 THR THR A . n A 1 169 THR 169 178 178 THR THR A . n A 1 170 ASN 170 179 179 ASN ASN A . n A 1 171 PRO 171 180 180 PRO PRO A . n A 1 172 ASP 172 181 181 ASP ASP A . n A 1 173 GLY 173 182 182 GLY GLY A . n A 1 174 THR 174 183 183 THR THR A . n A 1 175 GLU 175 184 184 GLU GLU A . n A 1 176 ILE 176 185 185 ILE ILE A . n A 1 177 PRO 177 186 186 PRO PRO A . n A 1 178 GLU 178 187 187 GLU GLU A . n A 1 179 TRP 179 188 188 TRP TRP A . n A 1 180 LEU 180 189 189 LEU LEU A . n A 1 181 PRO 181 190 190 PRO PRO A . n A 1 182 ILE 182 191 191 ILE ILE A . n A 1 183 PRO 183 192 192 PRO PRO A . n A 1 184 TYR 184 193 193 TYR TYR A . n A 1 185 ALA 185 194 194 ALA ALA A . n A 1 186 ASN 186 195 195 ASN ASN A . n A 1 187 MSE 187 196 196 MSE MSE A . n A 1 188 PRO 188 197 197 PRO PRO A . n A 1 189 THR 189 198 198 THR THR A . n A 1 190 LYS 190 199 199 LYS LYS A . n A 1 191 GLY 191 200 200 GLY GLY A . n A 1 192 TYR 192 201 201 TYR TYR A . n A 1 193 ILE 193 202 202 ILE ILE A . n A 1 194 GLY 194 203 203 GLY GLY A . n A 1 195 LEU 195 204 204 LEU LEU A . n A 1 196 GLN 196 205 205 GLN GLN A . n A 1 197 GLY 197 206 206 GLY GLY A . n A 1 198 LYS 198 207 207 LYS LYS A . n A 1 199 HIS 199 208 208 HIS HIS A . n A 1 200 GLY 200 209 209 GLY GLY A . n A 1 201 GLU 201 210 210 GLU GLU A . n A 1 202 SER 202 211 211 SER SER A . n A 1 203 ASN 203 212 212 ASN ASN A . n A 1 204 ILE 204 213 213 ILE ILE A . n A 1 205 TRP 205 214 214 TRP TRP A . n A 1 206 PHE 206 215 215 PHE PHE A . n A 1 207 ARG 207 216 216 ARG ARG A . n A 1 208 ASN 208 217 217 ASN ASN A . n A 1 209 ILE 209 218 218 ILE ILE A . n A 1 210 GLN 210 219 219 GLN GLN A . n A 1 211 LEU 211 220 220 LEU LEU A . n A 1 212 LYS 212 221 221 LYS LYS A . n A 1 213 GLN 213 222 222 GLN GLN A . n A 1 214 LEU 214 223 223 LEU LEU A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 300 300 IOD IOD A . C 2 IOD 1 301 301 IOD IOD A . D 2 IOD 1 302 302 IOD IOD A . E 3 EDO 1 303 303 EDO EDO A . F 3 EDO 1 304 304 EDO EDO A . G 3 EDO 1 305 305 EDO EDO A . H 3 EDO 1 306 306 EDO EDO A . I 3 EDO 1 307 307 EDO EDO A . J 3 EDO 1 308 308 EDO EDO A . K 4 HOH 1 309 309 HOH HOH A . K 4 HOH 2 310 310 HOH HOH A . K 4 HOH 3 311 311 HOH HOH A . K 4 HOH 4 312 312 HOH HOH A . K 4 HOH 5 313 313 HOH HOH A . K 4 HOH 6 314 314 HOH HOH A . K 4 HOH 7 315 315 HOH HOH A . K 4 HOH 8 316 316 HOH HOH A . K 4 HOH 9 317 317 HOH HOH A . K 4 HOH 10 318 318 HOH HOH A . K 4 HOH 11 319 319 HOH HOH A . K 4 HOH 12 320 320 HOH HOH A . K 4 HOH 13 321 321 HOH HOH A . K 4 HOH 14 322 322 HOH HOH A . K 4 HOH 15 323 323 HOH HOH A . K 4 HOH 16 324 324 HOH HOH A . K 4 HOH 17 325 325 HOH HOH A . K 4 HOH 18 326 326 HOH HOH A . K 4 HOH 19 327 327 HOH HOH A . K 4 HOH 20 328 328 HOH HOH A . K 4 HOH 21 329 329 HOH HOH A . K 4 HOH 22 330 330 HOH HOH A . K 4 HOH 23 331 331 HOH HOH A . K 4 HOH 24 332 332 HOH HOH A . K 4 HOH 25 333 333 HOH HOH A . K 4 HOH 26 334 334 HOH HOH A . K 4 HOH 27 335 335 HOH HOH A . K 4 HOH 28 336 336 HOH HOH A . K 4 HOH 29 337 337 HOH HOH A . K 4 HOH 30 338 338 HOH HOH A . K 4 HOH 31 339 339 HOH HOH A . K 4 HOH 32 340 340 HOH HOH A . K 4 HOH 33 341 341 HOH HOH A . K 4 HOH 34 342 342 HOH HOH A . K 4 HOH 35 343 343 HOH HOH A . K 4 HOH 36 344 344 HOH HOH A . K 4 HOH 37 345 345 HOH HOH A . K 4 HOH 38 346 346 HOH HOH A . K 4 HOH 39 347 347 HOH HOH A . K 4 HOH 40 348 348 HOH HOH A . K 4 HOH 41 349 349 HOH HOH A . K 4 HOH 42 350 350 HOH HOH A . K 4 HOH 43 351 351 HOH HOH A . K 4 HOH 44 352 352 HOH HOH A . K 4 HOH 45 353 353 HOH HOH A . K 4 HOH 46 354 354 HOH HOH A . K 4 HOH 47 355 355 HOH HOH A . K 4 HOH 48 356 356 HOH HOH A . K 4 HOH 49 357 357 HOH HOH A . K 4 HOH 50 358 358 HOH HOH A . K 4 HOH 51 359 359 HOH HOH A . K 4 HOH 52 360 360 HOH HOH A . K 4 HOH 53 361 361 HOH HOH A . K 4 HOH 54 362 362 HOH HOH A . K 4 HOH 55 363 363 HOH HOH A . K 4 HOH 56 364 364 HOH HOH A . K 4 HOH 57 365 365 HOH HOH A . K 4 HOH 58 366 366 HOH HOH A . K 4 HOH 59 367 367 HOH HOH A . K 4 HOH 60 368 368 HOH HOH A . K 4 HOH 61 369 369 HOH HOH A . K 4 HOH 62 370 370 HOH HOH A . K 4 HOH 63 371 371 HOH HOH A . K 4 HOH 64 372 372 HOH HOH A . K 4 HOH 65 373 373 HOH HOH A . K 4 HOH 66 374 374 HOH HOH A . K 4 HOH 67 375 375 HOH HOH A . K 4 HOH 68 376 376 HOH HOH A . K 4 HOH 69 377 377 HOH HOH A . K 4 HOH 70 378 378 HOH HOH A . K 4 HOH 71 379 379 HOH HOH A . K 4 HOH 72 380 380 HOH HOH A . K 4 HOH 73 381 381 HOH HOH A . K 4 HOH 74 382 382 HOH HOH A . K 4 HOH 75 383 383 HOH HOH A . K 4 HOH 76 384 384 HOH HOH A . K 4 HOH 77 385 385 HOH HOH A . K 4 HOH 78 386 386 HOH HOH A . K 4 HOH 79 387 387 HOH HOH A . K 4 HOH 80 388 388 HOH HOH A . K 4 HOH 81 389 389 HOH HOH A . K 4 HOH 82 390 390 HOH HOH A . K 4 HOH 83 391 391 HOH HOH A . K 4 HOH 84 392 392 HOH HOH A . K 4 HOH 85 393 393 HOH HOH A . K 4 HOH 86 394 394 HOH HOH A . K 4 HOH 87 395 395 HOH HOH A . K 4 HOH 88 396 396 HOH HOH A . K 4 HOH 89 397 397 HOH HOH A . K 4 HOH 90 398 398 HOH HOH A . K 4 HOH 91 399 399 HOH HOH A . K 4 HOH 92 400 400 HOH HOH A . K 4 HOH 93 401 401 HOH HOH A . K 4 HOH 94 402 402 HOH HOH A . K 4 HOH 95 403 403 HOH HOH A . K 4 HOH 96 404 404 HOH HOH A . K 4 HOH 97 405 405 HOH HOH A . K 4 HOH 98 406 406 HOH HOH A . K 4 HOH 99 407 407 HOH HOH A . K 4 HOH 100 408 408 HOH HOH A . K 4 HOH 101 409 409 HOH HOH A . K 4 HOH 102 410 410 HOH HOH A . K 4 HOH 103 411 411 HOH HOH A . K 4 HOH 104 412 412 HOH HOH A . K 4 HOH 105 413 413 HOH HOH A . K 4 HOH 106 414 414 HOH HOH A . K 4 HOH 107 415 415 HOH HOH A . K 4 HOH 108 416 416 HOH HOH A . K 4 HOH 109 417 417 HOH HOH A . K 4 HOH 110 418 418 HOH HOH A . K 4 HOH 111 419 419 HOH HOH A . K 4 HOH 112 420 420 HOH HOH A . K 4 HOH 113 421 421 HOH HOH A . K 4 HOH 114 422 422 HOH HOH A . K 4 HOH 115 423 423 HOH HOH A . K 4 HOH 116 424 424 HOH HOH A . K 4 HOH 117 425 425 HOH HOH A . K 4 HOH 118 426 426 HOH HOH A . K 4 HOH 119 427 427 HOH HOH A . K 4 HOH 120 428 428 HOH HOH A . K 4 HOH 121 429 429 HOH HOH A . K 4 HOH 122 430 430 HOH HOH A . K 4 HOH 123 431 431 HOH HOH A . K 4 HOH 124 432 432 HOH HOH A . K 4 HOH 125 433 433 HOH HOH A . K 4 HOH 126 434 434 HOH HOH A . K 4 HOH 127 435 435 HOH HOH A . K 4 HOH 128 436 436 HOH HOH A . K 4 HOH 129 437 437 HOH HOH A . K 4 HOH 130 438 438 HOH HOH A . K 4 HOH 131 439 439 HOH HOH A . K 4 HOH 132 440 440 HOH HOH A . K 4 HOH 133 441 441 HOH HOH A . K 4 HOH 134 442 442 HOH HOH A . K 4 HOH 135 443 443 HOH HOH A . K 4 HOH 136 444 444 HOH HOH A . K 4 HOH 137 445 445 HOH HOH A . K 4 HOH 138 446 446 HOH HOH A . K 4 HOH 139 447 447 HOH HOH A . K 4 HOH 140 448 448 HOH HOH A . K 4 HOH 141 449 449 HOH HOH A . K 4 HOH 142 450 450 HOH HOH A . K 4 HOH 143 451 451 HOH HOH A . K 4 HOH 144 452 452 HOH HOH A . K 4 HOH 145 453 453 HOH HOH A . K 4 HOH 146 454 454 HOH HOH A . K 4 HOH 147 455 455 HOH HOH A . K 4 HOH 148 456 456 HOH HOH A . K 4 HOH 149 457 457 HOH HOH A . K 4 HOH 150 458 458 HOH HOH A . K 4 HOH 151 459 459 HOH HOH A . K 4 HOH 152 460 460 HOH HOH A . K 4 HOH 153 461 461 HOH HOH A . K 4 HOH 154 462 462 HOH HOH A . K 4 HOH 155 463 463 HOH HOH A . K 4 HOH 156 464 464 HOH HOH A . K 4 HOH 157 465 465 HOH HOH A . K 4 HOH 158 466 466 HOH HOH A . K 4 HOH 159 467 467 HOH HOH A . K 4 HOH 160 468 468 HOH HOH A . K 4 HOH 161 469 469 HOH HOH A . K 4 HOH 162 470 470 HOH HOH A . K 4 HOH 163 471 471 HOH HOH A . K 4 HOH 164 472 472 HOH HOH A . K 4 HOH 165 473 473 HOH HOH A . K 4 HOH 166 474 474 HOH HOH A . K 4 HOH 167 475 475 HOH HOH A . K 4 HOH 168 476 476 HOH HOH A . K 4 HOH 169 477 477 HOH HOH A . K 4 HOH 170 478 478 HOH HOH A . K 4 HOH 171 479 479 HOH HOH A . K 4 HOH 172 480 480 HOH HOH A . K 4 HOH 173 481 481 HOH HOH A . K 4 HOH 174 482 482 HOH HOH A . K 4 HOH 175 483 483 HOH HOH A . K 4 HOH 176 484 484 HOH HOH A . K 4 HOH 177 485 485 HOH HOH A . K 4 HOH 178 486 486 HOH HOH A . K 4 HOH 179 487 487 HOH HOH A . K 4 HOH 180 488 488 HOH HOH A . K 4 HOH 181 489 489 HOH HOH A . K 4 HOH 182 490 490 HOH HOH A . K 4 HOH 183 491 491 HOH HOH A . K 4 HOH 184 492 492 HOH HOH A . K 4 HOH 185 493 493 HOH HOH A . K 4 HOH 186 494 494 HOH HOH A . K 4 HOH 187 495 495 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 138 A MSE 147 ? MET SELENOMETHIONINE 2 A MSE 187 A MSE 196 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-12-24 4 'Structure model' 1 3 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 29.8020 _pdbx_refine_tls.origin_y 24.8440 _pdbx_refine_tls.origin_z 55.9790 _pdbx_refine_tls.T[1][1] 0.0152 _pdbx_refine_tls.T[2][2] 0.0881 _pdbx_refine_tls.T[3][3] 0.0850 _pdbx_refine_tls.T[1][2] 0.0121 _pdbx_refine_tls.T[1][3] -0.0137 _pdbx_refine_tls.T[2][3] 0.0028 _pdbx_refine_tls.L[1][1] 0.2823 _pdbx_refine_tls.L[2][2] 0.7913 _pdbx_refine_tls.L[3][3] 1.5430 _pdbx_refine_tls.L[1][2] 0.2395 _pdbx_refine_tls.L[1][3] 0.2111 _pdbx_refine_tls.L[2][3] 0.7159 _pdbx_refine_tls.S[1][1] 0.0128 _pdbx_refine_tls.S[2][2] 0.0468 _pdbx_refine_tls.S[3][3] -0.0596 _pdbx_refine_tls.S[1][2] 0.0274 _pdbx_refine_tls.S[1][3] -0.0477 _pdbx_refine_tls.S[2][3] -0.1047 _pdbx_refine_tls.S[2][1] 0.0834 _pdbx_refine_tls.S[3][1] 0.1412 _pdbx_refine_tls.S[3][2] 0.0824 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -17 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 223 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'January 30' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3S5Q _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THIS CONSTRUCT (RESIDUES 29-223) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG.' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 353 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 493 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 85 ? ? -163.87 -153.89 2 1 ASN A 96 ? ? -114.03 56.40 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 187 ? CG ? A GLU 178 CG 2 1 Y 1 A GLU 187 ? CD ? A GLU 178 CD 3 1 Y 1 A GLU 187 ? OE1 ? A GLU 178 OE1 4 1 Y 1 A GLU 187 ? OE2 ? A GLU 178 OE2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MSE _pdbx_unobs_or_zero_occ_residues.auth_seq_id -18 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MSE _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 1,2-ETHANEDIOL EDO 4 water HOH #