HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 23-MAY-11 3S5T TITLE CRYSTAL STRUCTURE OF A MEMBER OF DUF3298 FAMILY (BF2082) FROM TITLE 2 BACTEROIDES FRAGILIS NCTC 9343 AT 2.30 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUF3298 FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: NCTC 9343; SOURCE 5 GENE: BF2082; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PEPTIDOGLYCAN DEACETYLASE N-TERMINAL NONCATALYTIC REGION, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3S5T 1 REMARK SEQADV LINK REVDAT 5 24-JAN-18 3S5T 1 JRNL REVDAT 4 25-OCT-17 3S5T 1 REMARK REVDAT 3 16-NOV-11 3S5T 1 TITLE REVDAT 2 20-JUL-11 3S5T 1 TITLE REVDAT 1 29-JUN-11 3S5T 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A MEMBER OF DUF3298 FAMILY (BF2082) JRNL TITL 2 FROM BACTEROIDES FRAGILIS NCTC 9343 AT 2.30 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 15929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 794 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2822 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2067 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2690 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE : 0.2201 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.68 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 132 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2027 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 55 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.88100 REMARK 3 B22 (A**2) : -0.88100 REMARK 3 B33 (A**2) : 1.76200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2144 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2920 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 966 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 60 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 306 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2144 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 278 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2476 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.34 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.82 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|28 - 284 } REMARK 3 ORIGIN FOR THE GROUP (A): -14.4734 77.2567 7.4522 REMARK 3 T TENSOR REMARK 3 T11: -0.2316 T22: 0.0716 REMARK 3 T33: -0.1524 T12: 0.0312 REMARK 3 T13: -0.0173 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.5648 L22: 1.3425 REMARK 3 L33: 1.8410 L12: 0.7705 REMARK 3 L13: 0.8604 L23: 0.2924 REMARK 3 S TENSOR REMARK 3 S11: 0.0621 S12: 0.0310 S13: -0.2061 REMARK 3 S21: -0.0601 S22: 0.1102 S23: -0.3203 REMARK 3 S31: 0.0725 S32: 0.6375 S33: -0.1723 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. MPD,CL, PO4 MODELED ARE PRESENT IN PROTEIN/ REMARK 3 CRYSTALLIZATION/ CRYO CONDITIONS. 4. ATOM RECORD CONTAINS SUM OF REMARK 3 TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS REMARK 3 AND RESIDUAL U FACTORS. REMARK 4 REMARK 4 3S5T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97915,0.97892 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15972 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 29.298 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73100 REMARK 200 R SYM FOR SHELL (I) : 0.73100 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.0% 2-METHYL-2,4-PENTANEDIOL, 0.2M REMARK 280 LITHIUM SULFATE, 0.1M PHOSPHATE-CITRATE PH 4.2, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.75333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.37667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.56500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.18833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 100.94167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.75333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.37667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.18833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.56500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 100.94167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A REMARK 300 DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 170.31256 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 21 REMARK 465 CYS A 22 REMARK 465 GLY A 23 REMARK 465 ASP A 24 REMARK 465 LYS A 25 REMARK 465 MSE A 26 REMARK 465 ASN A 27 REMARK 465 GLU A 125 REMARK 465 SER A 126 REMARK 465 GLU A 127 REMARK 465 GLY A 128 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 71 CD CE NZ REMARK 470 LYS A 122 CE NZ REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ASP A 193 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 149 -110.70 47.95 REMARK 500 TYR A 249 -27.05 85.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 290 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 390146 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 21-284) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3S5T A 21 284 UNP Q5LDM9 Q5LDM9_BACFN 21 284 SEQADV 3S5T GLY A 0 UNP Q5LDM9 EXPRESSION TAG SEQRES 1 A 265 GLY SER CYS GLY ASP LYS MSE ASN LYS ASN THR GLY ALA SEQRES 2 A 265 LEU GLU PHE ASP SER ILE GLN VAL ASN GLU THR ALA HIS SEQRES 3 A 265 LEU PHE GLY ASP THR ALA LYS PRO ALA CYS ASN LEU THR SEQRES 4 A 265 ILE ASN PHE ALA TYR PRO VAL LYS SER THR ASP ASN LYS SEQRES 5 A 265 LEU LYS ASP SER LEU ASN SER TYR PHE ILE ALA ALA CYS SEQRES 6 A 265 PHE GLY GLU GLY TYR ILE GLY GLU LYS PRO ALA GLN VAL SEQRES 7 A 265 VAL LYS GLU TYR THR GLU HIS TYR VAL LYS GLU TYR ARG SEQRES 8 A 265 THR ASP LEU GLU PRO MSE TYR ALA GLU ASP GLU LYS ASN SEQRES 9 A 265 LYS GLU SER GLU GLY SER ILE GLY ALA TRP TYR SER TYR SEQRES 10 A 265 TYR LYS GLY ILE GLU SER HIS VAL GLN LEU TYR TYR LYS SEQRES 11 A 265 ASN LEU LEU VAL TYR ARG ILE ASN TYR ASN GLU TYR THR SEQRES 12 A 265 GLY GLY ALA HIS GLY ILE TYR MSE THR THR PHE LEU ASN SEQRES 13 A 265 MSE ASP LEU ILE ASN LEU ARG PRO LEU LYS LEU ASP ASP SEQRES 14 A 265 ILE PHE THR GLY ASP TYR LYS GLU ALA LEU THR ASP LEU SEQRES 15 A 265 LEU TRP ASN GLN LEU MSE ALA ASP LYS LYS VAL THR THR SEQRES 16 A 265 HIS GLU ALA LEU GLU ASP MSE GLY TYR GLY SER THR GLY SEQRES 17 A 265 ASP ILE ALA PRO THR GLU ASN PHE TYR LEU ASP LYS ASP SEQRES 18 A 265 GLY ILE THR PHE TYR TYR ASN VAL TYR ASP ILE THR PRO SEQRES 19 A 265 TYR ALA MSE GLY PRO VAL GLU ILE LYS ILE PRO TYR GLU SEQRES 20 A 265 MSE MSE GLU HIS MSE LEU GLY SER ASN PRO ILE ILE GLY SEQRES 21 A 265 GLU MSE LYS SER LYS MODRES 3S5T MSE A 116 MET SELENOMETHIONINE MODRES 3S5T MSE A 170 MET SELENOMETHIONINE MODRES 3S5T MSE A 176 MET SELENOMETHIONINE MODRES 3S5T MSE A 207 MET SELENOMETHIONINE MODRES 3S5T MSE A 221 MET SELENOMETHIONINE MODRES 3S5T MSE A 256 MET SELENOMETHIONINE MODRES 3S5T MSE A 267 MET SELENOMETHIONINE MODRES 3S5T MSE A 268 MET SELENOMETHIONINE MODRES 3S5T MSE A 271 MET SELENOMETHIONINE MODRES 3S5T MSE A 281 MET SELENOMETHIONINE HET MSE A 116 13 HET MSE A 170 8 HET MSE A 176 8 HET MSE A 207 8 HET MSE A 221 8 HET MSE A 256 8 HET MSE A 267 8 HET MSE A 268 8 HET MSE A 271 8 HET MSE A 281 8 HET PO4 A 285 5 HET PO4 A 286 5 HET MPD A 287 8 HET MPD A 288 8 HET MPD A 289 8 HET CL A 290 1 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM CL CHLORIDE ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 MPD 3(C6 H14 O2) FORMUL 7 CL CL 1- FORMUL 8 HOH *55(H2 O) HELIX 1 1 PHE A 47 ASP A 49 5 3 HELIX 2 2 ASP A 69 PHE A 85 1 17 HELIX 3 3 GLY A 86 ILE A 90 5 5 HELIX 4 4 LYS A 93 LYS A 124 1 32 HELIX 5 5 LYS A 185 PHE A 190 1 6 HELIX 6 6 TYR A 194 LYS A 210 1 17 HELIX 7 7 THR A 214 MSE A 221 1 8 HELIX 8 8 PRO A 253 GLY A 257 5 5 HELIX 9 9 GLU A 266 MSE A 268 5 3 HELIX 10 10 ASN A 275 LYS A 284 1 10 SHEET 1 A 6 GLU A 34 HIS A 45 0 SHEET 2 A 6 ALA A 54 LYS A 66 -1 O ILE A 59 N VAL A 40 SHEET 3 A 6 TYR A 136 TYR A 148 1 O SER A 142 N ASN A 60 SHEET 4 A 6 LEU A 151 TYR A 161 -1 O ASN A 157 N GLU A 141 SHEET 5 A 6 ILE A 168 ASP A 177 -1 O MSE A 170 N TYR A 158 SHEET 6 A 6 ARG A 182 PRO A 183 -1 O ARG A 182 N ASP A 177 SHEET 1 B 3 PHE A 235 LEU A 237 0 SHEET 2 B 3 GLY A 241 TYR A 246 -1 O THR A 243 N TYR A 236 SHEET 3 B 3 VAL A 259 PRO A 264 -1 O VAL A 259 N TYR A 246 LINK C PRO A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N TYR A 117 1555 1555 1.35 LINK C TYR A 169 N MSE A 170 1555 1555 1.32 LINK C MSE A 170 N THR A 171 1555 1555 1.33 LINK C ASN A 175 N MSE A 176 1555 1555 1.34 LINK C MSE A 176 N ASP A 177 1555 1555 1.34 LINK C LEU A 206 N MSE A 207 1555 1555 1.35 LINK C MSE A 207 N ALA A 208 1555 1555 1.35 LINK C ASP A 220 N MSE A 221 1555 1555 1.34 LINK C MSE A 221 N GLY A 222 1555 1555 1.34 LINK C ALA A 255 N MSE A 256 1555 1555 1.34 LINK C MSE A 256 N GLY A 257 1555 1555 1.32 LINK C GLU A 266 N MSE A 267 1555 1555 1.32 LINK C MSE A 267 N MSE A 268 1555 1555 1.34 LINK C MSE A 268 N GLU A 269 1555 1555 1.35 LINK C HIS A 270 N MSE A 271 1555 1555 1.32 LINK C MSE A 271 N LEU A 272 1555 1555 1.35 LINK C GLU A 280 N MSE A 281 1555 1555 1.35 LINK C MSE A 281 N LYS A 282 1555 1555 1.35 SITE 1 AC1 3 SER A 78 TYR A 79 GLU A 87 SITE 1 AC2 1 LYS A 73 SITE 1 AC3 4 GLU A 108 TYR A 136 MPD A 288 HOH A 339 SITE 1 AC4 6 ASP A 112 LEU A 113 TYR A 136 HIS A 166 SITE 2 AC4 6 TYR A 249 MPD A 287 SITE 1 AC5 6 PHE A 47 GLY A 48 ARG A 110 GLU A 114 SITE 2 AC5 6 GLU A 119 ASN A 123 SITE 1 AC6 2 HIS A 45 ARG A 110 CRYST1 98.330 98.330 121.130 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010170 0.005872 0.000000 0.00000 SCALE2 0.000000 0.011743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008256 0.00000