data_3S6E # _entry.id 3S6E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S6E pdb_00003s6e 10.2210/pdb3s6e/pdb RCSB RCSB065818 ? ? WWPDB D_1000065818 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 421759 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3S6E _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-25 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joint Center for Structural Genomics (JCSG)' 1 'Partnership for T-Cell Biology (TCELL)' 2 # _citation.id primary _citation.title 'Crystal structure of a RNA binding motif protein 39 (RBM39) from Mus musculus at 0.95 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joint Center for Structural Genomics (JCSG)' 1 ? primary 'Partnership for T-Cell Biology (TCELL)' 2 ? # _cell.entry_id 3S6E _cell.length_a 44.701 _cell.length_b 55.139 _cell.length_c 84.601 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S6E _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA-binding protein 39' 12713.939 2 ? ? 'sequence database residues 418-530' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 4 water nat water 18.015 386 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Coactivator of activating protein 1 and estrogen receptors, Coactivator of AP-1 and ERs, RNA-binding motif protein 39, RNA-binding region-containing protein 2, Transcription coactivator CAPER ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GVQPLATQCFQLSN(MSE)FNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALH GRWFAGK(MSE)ITAAYVPLPTYHNLFPDS(MSE)TATQLLVPSRR ; _entity_poly.pdbx_seq_one_letter_code_can ;GVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWF AGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 421759 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 VAL n 1 3 GLN n 1 4 PRO n 1 5 LEU n 1 6 ALA n 1 7 THR n 1 8 GLN n 1 9 CYS n 1 10 PHE n 1 11 GLN n 1 12 LEU n 1 13 SER n 1 14 ASN n 1 15 MSE n 1 16 PHE n 1 17 ASN n 1 18 PRO n 1 19 GLN n 1 20 THR n 1 21 GLU n 1 22 GLU n 1 23 GLU n 1 24 VAL n 1 25 GLY n 1 26 TRP n 1 27 ASP n 1 28 THR n 1 29 GLU n 1 30 ILE n 1 31 LYS n 1 32 ASP n 1 33 ASP n 1 34 VAL n 1 35 ILE n 1 36 GLU n 1 37 GLU n 1 38 CYS n 1 39 ASN n 1 40 LYS n 1 41 HIS n 1 42 GLY n 1 43 GLY n 1 44 VAL n 1 45 ILE n 1 46 HIS n 1 47 ILE n 1 48 TYR n 1 49 VAL n 1 50 ASP n 1 51 LYS n 1 52 ASN n 1 53 SER n 1 54 ALA n 1 55 GLN n 1 56 GLY n 1 57 ASN n 1 58 VAL n 1 59 TYR n 1 60 VAL n 1 61 LYS n 1 62 CYS n 1 63 PRO n 1 64 SER n 1 65 ILE n 1 66 ALA n 1 67 ALA n 1 68 ALA n 1 69 ILE n 1 70 ALA n 1 71 ALA n 1 72 VAL n 1 73 ASN n 1 74 ALA n 1 75 LEU n 1 76 HIS n 1 77 GLY n 1 78 ARG n 1 79 TRP n 1 80 PHE n 1 81 ALA n 1 82 GLY n 1 83 LYS n 1 84 MSE n 1 85 ILE n 1 86 THR n 1 87 ALA n 1 88 ALA n 1 89 TYR n 1 90 VAL n 1 91 PRO n 1 92 LEU n 1 93 PRO n 1 94 THR n 1 95 TYR n 1 96 HIS n 1 97 ASN n 1 98 LEU n 1 99 PHE n 1 100 PRO n 1 101 ASP n 1 102 SER n 1 103 MSE n 1 104 THR n 1 105 ALA n 1 106 THR n 1 107 GLN n 1 108 LEU n 1 109 LEU n 1 110 VAL n 1 111 PRO n 1 112 SER n 1 113 ARG n 1 114 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BC030493, Caper, Rbm39, Rnpc2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM39_MOUSE _struct_ref.pdbx_db_accession Q8VH51 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA GKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR ; _struct_ref.pdbx_align_begin 418 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S6E A 2 ? 114 ? Q8VH51 418 ? 530 ? 418 530 2 1 3S6E B 2 ? 114 ? Q8VH51 418 ? 530 ? 418 530 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S6E GLY A 1 ? UNP Q8VH51 ? ? 'expression tag' 0 1 2 3S6E GLY B 1 ? UNP Q8VH51 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3S6E # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '20.00% polyethylene glycol 6000, 0.1M sodium citrate pH 5.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Vertical focusing mirror; double crystal Si(111) monochromator' _diffrn_detector.pdbx_collection_date 2011-03-05 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.95369 1.0 2 0.97915 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL14-1 _diffrn_source.type 'SSRL BEAMLINE BL14-1' _diffrn_source.pdbx_wavelength_list 0.95369,0.97915 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3S6E _reflns.d_resolution_high 0.95 _reflns.d_resolution_low 28.200 _reflns.number_all 131023 _reflns.number_obs 131023 _reflns.pdbx_netI_over_sigmaI 14.000 _reflns.pdbx_Rsym_value 0.063 _reflns.pdbx_redundancy 5.200 _reflns.percent_possible_obs 99.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate 6.707 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 0.950 0.970 ? 38502 ? 0.670 1.9 0.670 ? 4.100 ? 9292 96.700 1 1 0.970 1.000 ? 42502 ? 0.537 2.7 0.537 ? 4.600 ? 9241 98.400 2 1 1.000 1.030 ? 41751 ? 0.390 3.7 0.390 ? 4.600 ? 9031 98.600 3 1 1.030 1.060 ? 40851 ? 0.302 4.8 0.302 ? 4.600 ? 8816 99.000 4 1 1.060 1.100 ? 39723 ? 0.231 6.2 0.231 ? 4.700 ? 8532 99.200 5 1 1.100 1.140 ? 38555 ? 0.180 8.1 0.180 ? 4.700 ? 8283 99.500 6 1 1.140 1.180 ? 37790 ? 0.148 9.4 0.148 ? 4.700 ? 8084 99.700 7 1 1.180 1.230 ? 36500 ? 0.132 10.4 0.132 ? 4.700 ? 7756 99.900 8 1 1.230 1.280 ? 35310 ? 0.122 11.2 0.122 ? 4.700 ? 7483 100.000 9 1 1.280 1.340 ? 33863 ? 0.114 12.1 0.114 ? 4.800 ? 7129 100.000 10 1 1.340 1.420 ? 32619 ? 0.101 13.6 0.101 ? 4.800 ? 6829 100.000 11 1 1.420 1.500 ? 30916 ? 0.079 15.4 0.079 ? 4.800 ? 6436 100.000 12 1 1.500 1.610 ? 30295 ? 0.072 17.5 0.072 ? 5.000 ? 6101 100.000 13 1 1.610 1.730 ? 31353 ? 0.073 20.5 0.073 ? 5.500 ? 5662 100.000 14 1 1.730 1.900 ? 33634 ? 0.072 24.9 0.072 ? 6.400 ? 5238 100.000 15 1 1.900 2.120 ? 38310 ? 0.060 31.8 0.060 ? 8.000 ? 4781 100.000 16 1 2.120 2.450 ? 36018 ? 0.051 36.2 0.051 ? 8.500 ? 4225 100.000 17 1 2.450 3.000 ? 30571 ? 0.052 40.9 0.052 ? 8.500 ? 3609 100.000 18 1 3.000 4.250 ? 22897 ? 0.049 59.0 0.049 ? 8.000 ? 2845 100.000 19 1 4.250 28.200 ? 11798 ? 0.047 60.7 0.047 ? 7.200 ? 1650 99.500 20 1 # _refine.entry_id 3S6E _refine.ls_d_res_high 0.9500 _refine.ls_d_res_low 28.200 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.2000 _refine.ls_number_reflns_obs 130918 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3.CITRATE (CIT) FROM THE CRYSTALLIZATION SOLUTION AND GLYCEROL (GOL) FROM THE CRYOPROTECTANT SOLUTION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1197 _refine.ls_R_factor_R_work 0.1191 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1315 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 6590 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 11.9317 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.1700 _refine.aniso_B[2][2] 0.5600 _refine.aniso_B[3][3] -0.3900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9830 _refine.correlation_coeff_Fo_to_Fc_free 0.9810 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.0180 _refine.overall_SU_ML 0.0110 _refine.overall_SU_B 0.4530 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 42.530 _refine.B_iso_min 3.700 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.150 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.018 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1718 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 386 _refine_hist.number_atoms_total 2129 _refine_hist.d_res_high 0.9500 _refine_hist.d_res_low 28.200 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2065 0.018 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1333 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2882 1.832 1.957 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3349 1.222 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 303 5.777 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 92 36.779 25.978 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 343 11.882 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 4 8.950 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 327 0.113 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2410 0.011 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 386 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1283 1.997 2.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 500 1.107 2.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2124 2.904 3.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 782 2.883 2.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 722 4.070 3.000 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 3398 1.423 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 447 9.303 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 3311 4.418 3.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 0.9500 _refine_ls_shell.d_res_low 0.9750 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.6800 _refine_ls_shell.number_reflns_R_work 8765 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3110 _refine_ls_shell.R_factor_R_free 0.3220 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 450 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 9215 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S6E _struct.title 'Crystal structure of a RNA binding motif protein 39 (RBM39) from Mus musculuS at 0.95 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Ferredoxin-like, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, RNA BINDING PROTEIN, Partnership for T-Cell Biology, TCELL ; _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.entry_id 3S6E # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ;ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY AND CRYSTAL PACKING ANALYSIS SUPPORT THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT 300 OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 25 ? ASN A 39 ? GLY A 441 ASN A 455 1 ? 15 HELX_P HELX_P2 2 SER A 64 ? HIS A 76 ? SER A 480 HIS A 492 1 ? 13 HELX_P HELX_P3 3 PRO A 91 ? PHE A 99 ? PRO A 507 PHE A 515 1 ? 9 HELX_P HELX_P4 4 PRO A 100 ? MSE A 103 ? PRO A 516 MSE A 519 5 ? 4 HELX_P HELX_P5 5 ASN B 17 ? GLU B 23 ? ASN B 433 GLU B 439 5 ? 7 HELX_P HELX_P6 6 GLY B 25 ? ASN B 39 ? GLY B 441 ASN B 455 1 ? 15 HELX_P HELX_P7 7 SER B 64 ? HIS B 76 ? SER B 480 HIS B 492 1 ? 13 HELX_P HELX_P8 8 PRO B 91 ? PHE B 99 ? PRO B 507 PHE B 515 1 ? 9 HELX_P HELX_P9 9 PRO B 100 ? ALA B 105 ? PRO B 516 ALA B 521 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 14 C ? ? ? 1_555 A MSE 15 N ? ? A ASN 430 A MSE 431 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A MSE 15 C ? ? ? 1_555 A PHE 16 N ? ? A MSE 431 A PHE 432 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A LYS 83 C ? ? ? 1_555 A MSE 84 N ? ? A LYS 499 A MSE 500 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale4 covale both ? A MSE 84 C ? ? ? 1_555 A ILE 85 N ? ? A MSE 500 A ILE 501 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A SER 102 C ? ? ? 1_555 A MSE 103 N ? ? A SER 518 A MSE 519 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A MSE 103 C ? ? ? 1_555 A THR 104 N ? ? A MSE 519 A THR 520 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? B ASN 14 C ? ? ? 1_555 B MSE 15 N ? ? B ASN 430 B MSE 431 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale8 covale both ? B MSE 15 C ? ? ? 1_555 B PHE 16 N ? ? B MSE 431 B PHE 432 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale9 covale both ? B LYS 83 C ? ? ? 1_555 B MSE 84 N ? ? B LYS 499 B MSE 500 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale10 covale both ? B MSE 84 C ? ? ? 1_555 B ILE 85 N ? ? B MSE 500 B ILE 501 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale11 covale both ? B SER 102 C ? ? ? 1_555 B MSE 103 N ? ? B SER 518 B MSE 519 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale12 covale both ? B MSE 103 C ? ? ? 1_555 B THR 104 N ? ? B MSE 519 B THR 520 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 46 ? VAL A 49 ? HIS A 462 VAL A 465 A 2 VAL A 58 ? LYS A 61 ? VAL A 474 LYS A 477 A 3 CYS A 9 ? SER A 13 ? CYS A 425 SER A 429 A 4 THR A 86 ? VAL A 90 ? THR A 502 VAL A 506 B 1 TRP A 79 ? PHE A 80 ? TRP A 495 PHE A 496 B 2 LYS A 83 ? MSE A 84 ? LYS A 499 MSE A 500 C 1 HIS B 46 ? VAL B 49 ? HIS B 462 VAL B 465 C 2 VAL B 58 ? LYS B 61 ? VAL B 474 LYS B 477 C 3 CYS B 9 ? SER B 13 ? CYS B 425 SER B 429 C 4 THR B 86 ? VAL B 90 ? THR B 502 VAL B 506 D 1 TRP B 79 ? PHE B 80 ? TRP B 495 PHE B 496 D 2 LYS B 83 ? MSE B 84 ? LYS B 499 MSE B 500 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 48 ? N TYR A 464 O TYR A 59 ? O TYR A 475 A 2 3 O VAL A 58 ? O VAL A 474 N LEU A 12 ? N LEU A 428 A 3 4 N GLN A 11 ? N GLN A 427 O ALA A 88 ? O ALA A 504 B 1 2 N PHE A 80 ? N PHE A 496 O LYS A 83 ? O LYS A 499 C 1 2 N TYR B 48 ? N TYR B 464 O TYR B 59 ? O TYR B 475 C 2 3 O VAL B 58 ? O VAL B 474 N LEU B 12 ? N LEU B 428 C 3 4 N GLN B 11 ? N GLN B 427 O ALA B 88 ? O ALA B 504 D 1 2 N PHE B 80 ? N PHE B 496 O LYS B 83 ? O LYS B 499 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 601 ? 10 'BINDING SITE FOR RESIDUE GOL A 601' AC2 Software B GOL 602 ? 8 'BINDING SITE FOR RESIDUE GOL B 602' AC3 Software B CIT 603 ? 6 'BINDING SITE FOR RESIDUE CIT B 603' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLN A 3 ? GLN A 419 . ? 1_555 ? 2 AC1 10 VAL A 72 ? VAL A 488 . ? 1_555 ? 3 AC1 10 HIS A 76 ? HIS A 492 . ? 1_555 ? 4 AC1 10 ALA A 87 ? ALA A 503 . ? 1_555 ? 5 AC1 10 SER A 112 ? SER A 528 . ? 3_645 ? 6 AC1 10 ARG A 113 ? ARG A 529 . ? 3_645 ? 7 AC1 10 HOH F . ? HOH A 637 . ? 1_555 ? 8 AC1 10 HOH F . ? HOH A 702 . ? 1_555 ? 9 AC1 10 HOH F . ? HOH A 707 . ? 3_645 ? 10 AC1 10 HOH F . ? HOH A 944 . ? 1_555 ? 11 AC2 8 ASP A 50 ? ASP A 466 . ? 1_455 ? 12 AC2 8 ASN A 52 ? ASN A 468 . ? 1_455 ? 13 AC2 8 HIS B 76 ? HIS B 492 . ? 1_555 ? 14 AC2 8 ALA B 87 ? ALA B 503 . ? 1_555 ? 15 AC2 8 HOH G . ? HOH B 644 . ? 1_555 ? 16 AC2 8 HOH G . ? HOH B 662 . ? 1_555 ? 17 AC2 8 HOH G . ? HOH B 846 . ? 1_555 ? 18 AC2 8 HOH G . ? HOH B 864 . ? 1_555 ? 19 AC3 6 GLN A 55 ? GLN A 471 . ? 1_455 ? 20 AC3 6 GLU B 37 ? GLU B 453 . ? 1_555 ? 21 AC3 6 LYS B 40 ? LYS B 456 . ? 1_555 ? 22 AC3 6 HIS B 41 ? HIS B 457 . ? 1_555 ? 23 AC3 6 ARG B 78 ? ARG B 494 . ? 1_555 ? 24 AC3 6 HOH G . ? HOH B 981 . ? 1_555 ? # _atom_sites.entry_id 3S6E _atom_sites.fract_transf_matrix[1][1] 0.022371 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018136 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011820 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 VAL 2 418 418 VAL VAL A . n A 1 3 GLN 3 419 419 GLN GLN A . n A 1 4 PRO 4 420 420 PRO PRO A . n A 1 5 LEU 5 421 421 LEU LEU A . n A 1 6 ALA 6 422 422 ALA ALA A . n A 1 7 THR 7 423 423 THR THR A . n A 1 8 GLN 8 424 424 GLN GLN A . n A 1 9 CYS 9 425 425 CYS CYS A . n A 1 10 PHE 10 426 426 PHE PHE A . n A 1 11 GLN 11 427 427 GLN GLN A . n A 1 12 LEU 12 428 428 LEU LEU A . n A 1 13 SER 13 429 429 SER SER A . n A 1 14 ASN 14 430 430 ASN ASN A . n A 1 15 MSE 15 431 431 MSE MSE A . n A 1 16 PHE 16 432 432 PHE PHE A . n A 1 17 ASN 17 433 433 ASN ASN A . n A 1 18 PRO 18 434 434 PRO PRO A . n A 1 19 GLN 19 435 435 GLN GLN A . n A 1 20 THR 20 436 436 THR THR A . n A 1 21 GLU 21 437 437 GLU GLU A . n A 1 22 GLU 22 438 438 GLU GLU A . n A 1 23 GLU 23 439 439 GLU GLU A . n A 1 24 VAL 24 440 440 VAL VAL A . n A 1 25 GLY 25 441 441 GLY GLY A . n A 1 26 TRP 26 442 442 TRP TRP A . n A 1 27 ASP 27 443 443 ASP ASP A . n A 1 28 THR 28 444 444 THR THR A . n A 1 29 GLU 29 445 445 GLU GLU A . n A 1 30 ILE 30 446 446 ILE ILE A . n A 1 31 LYS 31 447 447 LYS LYS A . n A 1 32 ASP 32 448 448 ASP ASP A . n A 1 33 ASP 33 449 449 ASP ASP A . n A 1 34 VAL 34 450 450 VAL VAL A . n A 1 35 ILE 35 451 451 ILE ILE A . n A 1 36 GLU 36 452 452 GLU GLU A . n A 1 37 GLU 37 453 453 GLU GLU A . n A 1 38 CYS 38 454 454 CYS CYS A . n A 1 39 ASN 39 455 455 ASN ASN A . n A 1 40 LYS 40 456 456 LYS LYS A . n A 1 41 HIS 41 457 457 HIS HIS A . n A 1 42 GLY 42 458 458 GLY GLY A . n A 1 43 GLY 43 459 459 GLY GLY A . n A 1 44 VAL 44 460 460 VAL VAL A . n A 1 45 ILE 45 461 461 ILE ILE A . n A 1 46 HIS 46 462 462 HIS HIS A . n A 1 47 ILE 47 463 463 ILE ILE A . n A 1 48 TYR 48 464 464 TYR TYR A . n A 1 49 VAL 49 465 465 VAL VAL A . n A 1 50 ASP 50 466 466 ASP ASP A . n A 1 51 LYS 51 467 467 LYS LYS A . n A 1 52 ASN 52 468 468 ASN ASN A . n A 1 53 SER 53 469 469 SER SER A . n A 1 54 ALA 54 470 470 ALA ALA A . n A 1 55 GLN 55 471 471 GLN GLN A . n A 1 56 GLY 56 472 472 GLY GLY A . n A 1 57 ASN 57 473 473 ASN ASN A . n A 1 58 VAL 58 474 474 VAL VAL A . n A 1 59 TYR 59 475 475 TYR TYR A . n A 1 60 VAL 60 476 476 VAL VAL A . n A 1 61 LYS 61 477 477 LYS LYS A . n A 1 62 CYS 62 478 478 CYS CYS A . n A 1 63 PRO 63 479 479 PRO PRO A . n A 1 64 SER 64 480 480 SER SER A . n A 1 65 ILE 65 481 481 ILE ILE A . n A 1 66 ALA 66 482 482 ALA ALA A . n A 1 67 ALA 67 483 483 ALA ALA A . n A 1 68 ALA 68 484 484 ALA ALA A . n A 1 69 ILE 69 485 485 ILE ILE A . n A 1 70 ALA 70 486 486 ALA ALA A . n A 1 71 ALA 71 487 487 ALA ALA A . n A 1 72 VAL 72 488 488 VAL VAL A . n A 1 73 ASN 73 489 489 ASN ASN A . n A 1 74 ALA 74 490 490 ALA ALA A . n A 1 75 LEU 75 491 491 LEU LEU A . n A 1 76 HIS 76 492 492 HIS HIS A . n A 1 77 GLY 77 493 493 GLY GLY A . n A 1 78 ARG 78 494 494 ARG ARG A . n A 1 79 TRP 79 495 495 TRP TRP A . n A 1 80 PHE 80 496 496 PHE PHE A . n A 1 81 ALA 81 497 497 ALA ALA A . n A 1 82 GLY 82 498 498 GLY GLY A . n A 1 83 LYS 83 499 499 LYS LYS A . n A 1 84 MSE 84 500 500 MSE MSE A . n A 1 85 ILE 85 501 501 ILE ILE A . n A 1 86 THR 86 502 502 THR THR A . n A 1 87 ALA 87 503 503 ALA ALA A . n A 1 88 ALA 88 504 504 ALA ALA A . n A 1 89 TYR 89 505 505 TYR TYR A . n A 1 90 VAL 90 506 506 VAL VAL A . n A 1 91 PRO 91 507 507 PRO PRO A . n A 1 92 LEU 92 508 508 LEU LEU A . n A 1 93 PRO 93 509 509 PRO PRO A . n A 1 94 THR 94 510 510 THR THR A . n A 1 95 TYR 95 511 511 TYR TYR A . n A 1 96 HIS 96 512 512 HIS HIS A . n A 1 97 ASN 97 513 513 ASN ASN A . n A 1 98 LEU 98 514 514 LEU LEU A . n A 1 99 PHE 99 515 515 PHE PHE A . n A 1 100 PRO 100 516 516 PRO PRO A . n A 1 101 ASP 101 517 517 ASP ASP A . n A 1 102 SER 102 518 518 SER SER A . n A 1 103 MSE 103 519 519 MSE MSE A . n A 1 104 THR 104 520 520 THR THR A . n A 1 105 ALA 105 521 521 ALA ALA A . n A 1 106 THR 106 522 522 THR THR A . n A 1 107 GLN 107 523 523 GLN GLN A . n A 1 108 LEU 108 524 524 LEU LEU A . n A 1 109 LEU 109 525 525 LEU LEU A . n A 1 110 VAL 110 526 526 VAL VAL A . n A 1 111 PRO 111 527 527 PRO PRO A . n A 1 112 SER 112 528 528 SER SER A . n A 1 113 ARG 113 529 529 ARG ARG A . n A 1 114 ARG 114 530 530 ARG ARG A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 VAL 2 418 ? ? ? B . n B 1 3 GLN 3 419 419 GLN GLN B . n B 1 4 PRO 4 420 420 PRO PRO B . n B 1 5 LEU 5 421 421 LEU LEU B . n B 1 6 ALA 6 422 422 ALA ALA B . n B 1 7 THR 7 423 423 THR THR B . n B 1 8 GLN 8 424 424 GLN GLN B . n B 1 9 CYS 9 425 425 CYS CYS B . n B 1 10 PHE 10 426 426 PHE PHE B . n B 1 11 GLN 11 427 427 GLN GLN B . n B 1 12 LEU 12 428 428 LEU LEU B . n B 1 13 SER 13 429 429 SER SER B . n B 1 14 ASN 14 430 430 ASN ASN B . n B 1 15 MSE 15 431 431 MSE MSE B . n B 1 16 PHE 16 432 432 PHE PHE B . n B 1 17 ASN 17 433 433 ASN ASN B . n B 1 18 PRO 18 434 434 PRO PRO B . n B 1 19 GLN 19 435 435 GLN GLN B . n B 1 20 THR 20 436 436 THR THR B . n B 1 21 GLU 21 437 437 GLU GLU B . n B 1 22 GLU 22 438 438 GLU GLU B . n B 1 23 GLU 23 439 439 GLU GLU B . n B 1 24 VAL 24 440 440 VAL VAL B . n B 1 25 GLY 25 441 441 GLY GLY B . n B 1 26 TRP 26 442 442 TRP TRP B . n B 1 27 ASP 27 443 443 ASP ASP B . n B 1 28 THR 28 444 444 THR THR B . n B 1 29 GLU 29 445 445 GLU GLU B . n B 1 30 ILE 30 446 446 ILE ILE B . n B 1 31 LYS 31 447 447 LYS LYS B . n B 1 32 ASP 32 448 448 ASP ASP B . n B 1 33 ASP 33 449 449 ASP ASP B . n B 1 34 VAL 34 450 450 VAL VAL B . n B 1 35 ILE 35 451 451 ILE ILE B . n B 1 36 GLU 36 452 452 GLU GLU B . n B 1 37 GLU 37 453 453 GLU GLU B . n B 1 38 CYS 38 454 454 CYS CYS B . n B 1 39 ASN 39 455 455 ASN ASN B . n B 1 40 LYS 40 456 456 LYS LYS B . n B 1 41 HIS 41 457 457 HIS HIS B . n B 1 42 GLY 42 458 458 GLY GLY B . n B 1 43 GLY 43 459 459 GLY GLY B . n B 1 44 VAL 44 460 460 VAL VAL B . n B 1 45 ILE 45 461 461 ILE ILE B . n B 1 46 HIS 46 462 462 HIS HIS B . n B 1 47 ILE 47 463 463 ILE ILE B . n B 1 48 TYR 48 464 464 TYR TYR B . n B 1 49 VAL 49 465 465 VAL VAL B . n B 1 50 ASP 50 466 466 ASP ASP B . n B 1 51 LYS 51 467 467 LYS LYS B . n B 1 52 ASN 52 468 468 ASN ASN B . n B 1 53 SER 53 469 469 SER SER B . n B 1 54 ALA 54 470 470 ALA ALA B . n B 1 55 GLN 55 471 471 GLN GLN B . n B 1 56 GLY 56 472 472 GLY GLY B . n B 1 57 ASN 57 473 473 ASN ASN B . n B 1 58 VAL 58 474 474 VAL VAL B . n B 1 59 TYR 59 475 475 TYR TYR B . n B 1 60 VAL 60 476 476 VAL VAL B . n B 1 61 LYS 61 477 477 LYS LYS B . n B 1 62 CYS 62 478 478 CYS CYS B . n B 1 63 PRO 63 479 479 PRO PRO B . n B 1 64 SER 64 480 480 SER SER B . n B 1 65 ILE 65 481 481 ILE ILE B . n B 1 66 ALA 66 482 482 ALA ALA B . n B 1 67 ALA 67 483 483 ALA ALA B . n B 1 68 ALA 68 484 484 ALA ALA B . n B 1 69 ILE 69 485 485 ILE ILE B . n B 1 70 ALA 70 486 486 ALA ALA B . n B 1 71 ALA 71 487 487 ALA ALA B . n B 1 72 VAL 72 488 488 VAL VAL B . n B 1 73 ASN 73 489 489 ASN ASN B . n B 1 74 ALA 74 490 490 ALA ALA B . n B 1 75 LEU 75 491 491 LEU LEU B . n B 1 76 HIS 76 492 492 HIS HIS B . n B 1 77 GLY 77 493 493 GLY GLY B . n B 1 78 ARG 78 494 494 ARG ARG B . n B 1 79 TRP 79 495 495 TRP TRP B . n B 1 80 PHE 80 496 496 PHE PHE B . n B 1 81 ALA 81 497 497 ALA ALA B . n B 1 82 GLY 82 498 498 GLY GLY B . n B 1 83 LYS 83 499 499 LYS LYS B . n B 1 84 MSE 84 500 500 MSE MSE B . n B 1 85 ILE 85 501 501 ILE ILE B . n B 1 86 THR 86 502 502 THR THR B . n B 1 87 ALA 87 503 503 ALA ALA B . n B 1 88 ALA 88 504 504 ALA ALA B . n B 1 89 TYR 89 505 505 TYR TYR B . n B 1 90 VAL 90 506 506 VAL VAL B . n B 1 91 PRO 91 507 507 PRO PRO B . n B 1 92 LEU 92 508 508 LEU LEU B . n B 1 93 PRO 93 509 509 PRO PRO B . n B 1 94 THR 94 510 510 THR THR B . n B 1 95 TYR 95 511 511 TYR TYR B . n B 1 96 HIS 96 512 512 HIS HIS B . n B 1 97 ASN 97 513 513 ASN ASN B . n B 1 98 LEU 98 514 514 LEU LEU B . n B 1 99 PHE 99 515 515 PHE PHE B . n B 1 100 PRO 100 516 516 PRO PRO B . n B 1 101 ASP 101 517 517 ASP ASP B . n B 1 102 SER 102 518 518 SER SER B . n B 1 103 MSE 103 519 519 MSE MSE B . n B 1 104 THR 104 520 520 THR THR B . n B 1 105 ALA 105 521 521 ALA ALA B . n B 1 106 THR 106 522 522 THR THR B . n B 1 107 GLN 107 523 523 GLN GLN B . n B 1 108 LEU 108 524 524 LEU LEU B . n B 1 109 LEU 109 525 525 LEU LEU B . n B 1 110 VAL 110 526 526 VAL VAL B . n B 1 111 PRO 111 527 527 PRO PRO B . n B 1 112 SER 112 528 528 SER SER B . n B 1 113 ARG 113 529 529 ARG ARG B . n B 1 114 ARG 114 530 ? ? ? B . n # loop_ _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center PSI:Biology 'Joint Center for Structural Genomics' 1 JCSG PSI:Biology 'Partnership for T-Cell Biology' 2 TCELL # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 601 601 GOL GOL A . D 2 GOL 1 602 602 GOL GOL B . E 3 CIT 1 603 603 CIT CIT B . F 4 HOH 1 607 607 HOH HOH A . F 4 HOH 2 608 608 HOH HOH A . F 4 HOH 3 609 609 HOH HOH A . F 4 HOH 4 610 610 HOH HOH A . F 4 HOH 5 612 612 HOH HOH A . F 4 HOH 6 614 614 HOH HOH A . F 4 HOH 7 616 616 HOH HOH A . F 4 HOH 8 617 617 HOH HOH A . F 4 HOH 9 618 618 HOH HOH A . F 4 HOH 10 620 620 HOH HOH A . F 4 HOH 11 622 622 HOH HOH A . F 4 HOH 12 623 623 HOH HOH A . F 4 HOH 13 624 624 HOH HOH A . F 4 HOH 14 626 626 HOH HOH A . F 4 HOH 15 628 628 HOH HOH A . F 4 HOH 16 629 629 HOH HOH A . F 4 HOH 17 631 631 HOH HOH A . F 4 HOH 18 632 632 HOH HOH A . F 4 HOH 19 634 634 HOH HOH A . F 4 HOH 20 635 635 HOH HOH A . F 4 HOH 21 636 636 HOH HOH A . F 4 HOH 22 637 637 HOH HOH A . F 4 HOH 23 640 640 HOH HOH A . F 4 HOH 24 643 643 HOH HOH A . F 4 HOH 25 647 647 HOH HOH A . F 4 HOH 26 648 648 HOH HOH A . F 4 HOH 27 651 651 HOH HOH A . F 4 HOH 28 652 652 HOH HOH A . F 4 HOH 29 654 654 HOH HOH A . F 4 HOH 30 655 655 HOH HOH A . F 4 HOH 31 656 656 HOH HOH A . F 4 HOH 32 658 658 HOH HOH A . F 4 HOH 33 659 659 HOH HOH A . F 4 HOH 34 665 665 HOH HOH A . F 4 HOH 35 666 666 HOH HOH A . F 4 HOH 36 667 667 HOH HOH A . F 4 HOH 37 669 669 HOH HOH A . F 4 HOH 38 672 672 HOH HOH A . F 4 HOH 39 674 674 HOH HOH A . F 4 HOH 40 675 675 HOH HOH A . F 4 HOH 41 676 676 HOH HOH A . F 4 HOH 42 677 677 HOH HOH A . F 4 HOH 43 678 678 HOH HOH A . F 4 HOH 44 679 679 HOH HOH A . F 4 HOH 45 681 681 HOH HOH A . F 4 HOH 46 682 682 HOH HOH A . F 4 HOH 47 684 684 HOH HOH A . F 4 HOH 48 687 687 HOH HOH A . F 4 HOH 49 688 688 HOH HOH A . F 4 HOH 50 690 690 HOH HOH A . F 4 HOH 51 691 691 HOH HOH A . F 4 HOH 52 692 692 HOH HOH A . F 4 HOH 53 694 694 HOH HOH A . F 4 HOH 54 699 699 HOH HOH A . F 4 HOH 55 702 702 HOH HOH A . F 4 HOH 56 703 703 HOH HOH A . F 4 HOH 57 705 705 HOH HOH A . F 4 HOH 58 706 706 HOH HOH A . F 4 HOH 59 707 707 HOH HOH A . F 4 HOH 60 708 708 HOH HOH A . F 4 HOH 61 709 709 HOH HOH A . F 4 HOH 62 712 712 HOH HOH A . F 4 HOH 63 714 714 HOH HOH A . F 4 HOH 64 716 716 HOH HOH A . F 4 HOH 65 719 719 HOH HOH A . F 4 HOH 66 720 720 HOH HOH A . F 4 HOH 67 721 721 HOH HOH A . F 4 HOH 68 722 722 HOH HOH A . F 4 HOH 69 724 724 HOH HOH A . F 4 HOH 70 725 725 HOH HOH A . F 4 HOH 71 727 727 HOH HOH A . F 4 HOH 72 731 731 HOH HOH A . F 4 HOH 73 733 733 HOH HOH A . F 4 HOH 74 734 734 HOH HOH A . F 4 HOH 75 742 742 HOH HOH A . F 4 HOH 76 743 743 HOH HOH A . F 4 HOH 77 744 744 HOH HOH A . F 4 HOH 78 746 746 HOH HOH A . F 4 HOH 79 748 748 HOH HOH A . F 4 HOH 80 749 749 HOH HOH A . F 4 HOH 81 751 751 HOH HOH A . F 4 HOH 82 752 752 HOH HOH A . F 4 HOH 83 755 755 HOH HOH A . F 4 HOH 84 757 757 HOH HOH A . F 4 HOH 85 758 758 HOH HOH A . F 4 HOH 86 763 763 HOH HOH A . F 4 HOH 87 766 766 HOH HOH A . F 4 HOH 88 767 767 HOH HOH A . F 4 HOH 89 768 768 HOH HOH A . F 4 HOH 90 769 769 HOH HOH A . F 4 HOH 91 770 770 HOH HOH A . F 4 HOH 92 771 771 HOH HOH A . F 4 HOH 93 772 772 HOH HOH A . F 4 HOH 94 774 774 HOH HOH A . F 4 HOH 95 776 776 HOH HOH A . F 4 HOH 96 783 783 HOH HOH A . F 4 HOH 97 787 787 HOH HOH A . F 4 HOH 98 788 788 HOH HOH A . F 4 HOH 99 792 792 HOH HOH A . F 4 HOH 100 794 794 HOH HOH A . F 4 HOH 101 796 796 HOH HOH A . F 4 HOH 102 802 802 HOH HOH A . F 4 HOH 103 803 803 HOH HOH A . F 4 HOH 104 806 806 HOH HOH A . F 4 HOH 105 807 807 HOH HOH A . F 4 HOH 106 808 808 HOH HOH A . F 4 HOH 107 809 809 HOH HOH A . F 4 HOH 108 810 810 HOH HOH A . F 4 HOH 109 811 811 HOH HOH A . F 4 HOH 110 812 812 HOH HOH A . F 4 HOH 111 813 813 HOH HOH A . F 4 HOH 112 814 814 HOH HOH A . F 4 HOH 113 815 815 HOH HOH A . F 4 HOH 114 816 816 HOH HOH A . F 4 HOH 115 817 817 HOH HOH A . F 4 HOH 116 822 822 HOH HOH A . F 4 HOH 117 823 823 HOH HOH A . F 4 HOH 118 824 824 HOH HOH A . F 4 HOH 119 825 825 HOH HOH A . F 4 HOH 120 828 828 HOH HOH A . F 4 HOH 121 829 829 HOH HOH A . F 4 HOH 122 831 831 HOH HOH A . F 4 HOH 123 833 833 HOH HOH A . F 4 HOH 124 836 836 HOH HOH A . F 4 HOH 125 837 837 HOH HOH A . F 4 HOH 126 838 838 HOH HOH A . F 4 HOH 127 839 839 HOH HOH A . F 4 HOH 128 842 842 HOH HOH A . F 4 HOH 129 843 843 HOH HOH A . F 4 HOH 130 845 845 HOH HOH A . F 4 HOH 131 847 847 HOH HOH A . F 4 HOH 132 848 848 HOH HOH A . F 4 HOH 133 854 854 HOH HOH A . F 4 HOH 134 855 855 HOH HOH A . F 4 HOH 135 856 856 HOH HOH A . F 4 HOH 136 858 858 HOH HOH A . F 4 HOH 137 859 859 HOH HOH A . F 4 HOH 138 860 860 HOH HOH A . F 4 HOH 139 861 861 HOH HOH A . F 4 HOH 140 862 862 HOH HOH A . F 4 HOH 141 868 868 HOH HOH A . F 4 HOH 142 869 869 HOH HOH A . F 4 HOH 143 870 870 HOH HOH A . F 4 HOH 144 871 871 HOH HOH A . F 4 HOH 145 872 872 HOH HOH A . F 4 HOH 146 876 876 HOH HOH A . F 4 HOH 147 877 877 HOH HOH A . F 4 HOH 148 878 878 HOH HOH A . F 4 HOH 149 881 881 HOH HOH A . F 4 HOH 150 882 882 HOH HOH A . F 4 HOH 151 885 885 HOH HOH A . F 4 HOH 152 886 886 HOH HOH A . F 4 HOH 153 888 888 HOH HOH A . F 4 HOH 154 891 891 HOH HOH A . F 4 HOH 155 892 892 HOH HOH A . F 4 HOH 156 893 893 HOH HOH A . F 4 HOH 157 894 894 HOH HOH A . F 4 HOH 158 895 895 HOH HOH A . F 4 HOH 159 896 896 HOH HOH A . F 4 HOH 160 898 898 HOH HOH A . F 4 HOH 161 900 900 HOH HOH A . F 4 HOH 162 902 902 HOH HOH A . F 4 HOH 163 904 904 HOH HOH A . F 4 HOH 164 905 905 HOH HOH A . F 4 HOH 165 907 907 HOH HOH A . F 4 HOH 166 908 908 HOH HOH A . F 4 HOH 167 910 910 HOH HOH A . F 4 HOH 168 914 914 HOH HOH A . F 4 HOH 169 915 915 HOH HOH A . F 4 HOH 170 916 916 HOH HOH A . F 4 HOH 171 917 917 HOH HOH A . F 4 HOH 172 918 918 HOH HOH A . F 4 HOH 173 921 921 HOH HOH A . F 4 HOH 174 922 922 HOH HOH A . F 4 HOH 175 926 926 HOH HOH A . F 4 HOH 176 928 928 HOH HOH A . F 4 HOH 177 929 929 HOH HOH A . F 4 HOH 178 930 930 HOH HOH A . F 4 HOH 179 931 931 HOH HOH A . F 4 HOH 180 933 933 HOH HOH A . F 4 HOH 181 934 934 HOH HOH A . F 4 HOH 182 935 935 HOH HOH A . F 4 HOH 183 937 937 HOH HOH A . F 4 HOH 184 938 938 HOH HOH A . F 4 HOH 185 939 939 HOH HOH A . F 4 HOH 186 941 941 HOH HOH A . F 4 HOH 187 942 942 HOH HOH A . F 4 HOH 188 943 943 HOH HOH A . F 4 HOH 189 944 944 HOH HOH A . F 4 HOH 190 945 945 HOH HOH A . F 4 HOH 191 946 946 HOH HOH A . F 4 HOH 192 948 948 HOH HOH A . F 4 HOH 193 949 949 HOH HOH A . F 4 HOH 194 950 950 HOH HOH A . F 4 HOH 195 951 951 HOH HOH A . F 4 HOH 196 952 952 HOH HOH A . F 4 HOH 197 953 953 HOH HOH A . F 4 HOH 198 971 971 HOH HOH A . F 4 HOH 199 973 973 HOH HOH A . F 4 HOH 200 975 975 HOH HOH A . F 4 HOH 201 976 976 HOH HOH A . F 4 HOH 202 977 977 HOH HOH A . F 4 HOH 203 978 978 HOH HOH A . F 4 HOH 204 979 979 HOH HOH A . F 4 HOH 205 980 980 HOH HOH A . F 4 HOH 206 982 982 HOH HOH A . F 4 HOH 207 983 983 HOH HOH A . F 4 HOH 208 984 984 HOH HOH A . F 4 HOH 209 985 985 HOH HOH A . F 4 HOH 210 986 986 HOH HOH A . G 4 HOH 1 604 604 HOH HOH B . G 4 HOH 2 605 605 HOH HOH B . G 4 HOH 3 606 606 HOH HOH B . G 4 HOH 4 611 611 HOH HOH B . G 4 HOH 5 613 613 HOH HOH B . G 4 HOH 6 615 615 HOH HOH B . G 4 HOH 7 619 619 HOH HOH B . G 4 HOH 8 621 621 HOH HOH B . G 4 HOH 9 625 625 HOH HOH B . G 4 HOH 10 627 627 HOH HOH B . G 4 HOH 11 630 630 HOH HOH B . G 4 HOH 12 633 633 HOH HOH B . G 4 HOH 13 638 638 HOH HOH B . G 4 HOH 14 639 639 HOH HOH B . G 4 HOH 15 641 641 HOH HOH B . G 4 HOH 16 642 642 HOH HOH B . G 4 HOH 17 644 644 HOH HOH B . G 4 HOH 18 645 645 HOH HOH B . G 4 HOH 19 646 646 HOH HOH B . G 4 HOH 20 649 649 HOH HOH B . G 4 HOH 21 650 650 HOH HOH B . G 4 HOH 22 653 653 HOH HOH B . G 4 HOH 23 657 657 HOH HOH B . G 4 HOH 24 660 660 HOH HOH B . G 4 HOH 25 661 661 HOH HOH B . G 4 HOH 26 662 662 HOH HOH B . G 4 HOH 27 663 663 HOH HOH B . G 4 HOH 28 664 664 HOH HOH B . G 4 HOH 29 668 668 HOH HOH B . G 4 HOH 30 670 670 HOH HOH B . G 4 HOH 31 671 671 HOH HOH B . G 4 HOH 32 673 673 HOH HOH B . G 4 HOH 33 680 680 HOH HOH B . G 4 HOH 34 683 683 HOH HOH B . G 4 HOH 35 685 685 HOH HOH B . G 4 HOH 36 686 686 HOH HOH B . G 4 HOH 37 689 689 HOH HOH B . G 4 HOH 38 693 693 HOH HOH B . G 4 HOH 39 695 695 HOH HOH B . G 4 HOH 40 696 696 HOH HOH B . G 4 HOH 41 697 697 HOH HOH B . G 4 HOH 42 698 698 HOH HOH B . G 4 HOH 43 700 700 HOH HOH B . G 4 HOH 44 701 701 HOH HOH B . G 4 HOH 45 704 704 HOH HOH B . G 4 HOH 46 710 710 HOH HOH B . G 4 HOH 47 711 711 HOH HOH B . G 4 HOH 48 713 713 HOH HOH B . G 4 HOH 49 715 715 HOH HOH B . G 4 HOH 50 717 717 HOH HOH B . G 4 HOH 51 718 718 HOH HOH B . G 4 HOH 52 723 723 HOH HOH B . G 4 HOH 53 726 726 HOH HOH B . G 4 HOH 54 728 728 HOH HOH B . G 4 HOH 55 729 729 HOH HOH B . G 4 HOH 56 730 730 HOH HOH B . G 4 HOH 57 732 732 HOH HOH B . G 4 HOH 58 735 735 HOH HOH B . G 4 HOH 59 736 736 HOH HOH B . G 4 HOH 60 737 737 HOH HOH B . G 4 HOH 61 738 738 HOH HOH B . G 4 HOH 62 739 739 HOH HOH B . G 4 HOH 63 740 740 HOH HOH B . G 4 HOH 64 741 741 HOH HOH B . G 4 HOH 65 745 745 HOH HOH B . G 4 HOH 66 747 747 HOH HOH B . G 4 HOH 67 750 750 HOH HOH B . G 4 HOH 68 753 753 HOH HOH B . G 4 HOH 69 754 754 HOH HOH B . G 4 HOH 70 756 756 HOH HOH B . G 4 HOH 71 759 759 HOH HOH B . G 4 HOH 72 760 760 HOH HOH B . G 4 HOH 73 761 761 HOH HOH B . G 4 HOH 74 762 762 HOH HOH B . G 4 HOH 75 764 764 HOH HOH B . G 4 HOH 76 765 765 HOH HOH B . G 4 HOH 77 773 773 HOH HOH B . G 4 HOH 78 775 775 HOH HOH B . G 4 HOH 79 777 777 HOH HOH B . G 4 HOH 80 778 778 HOH HOH B . G 4 HOH 81 779 779 HOH HOH B . G 4 HOH 82 780 780 HOH HOH B . G 4 HOH 83 781 781 HOH HOH B . G 4 HOH 84 782 782 HOH HOH B . G 4 HOH 85 784 784 HOH HOH B . G 4 HOH 86 785 785 HOH HOH B . G 4 HOH 87 786 786 HOH HOH B . G 4 HOH 88 789 789 HOH HOH B . G 4 HOH 89 790 790 HOH HOH B . G 4 HOH 90 791 791 HOH HOH B . G 4 HOH 91 793 793 HOH HOH B . G 4 HOH 92 795 795 HOH HOH B . G 4 HOH 93 797 797 HOH HOH B . G 4 HOH 94 798 798 HOH HOH B . G 4 HOH 95 799 799 HOH HOH B . G 4 HOH 96 800 800 HOH HOH B . G 4 HOH 97 801 801 HOH HOH B . G 4 HOH 98 804 804 HOH HOH B . G 4 HOH 99 805 805 HOH HOH B . G 4 HOH 100 818 818 HOH HOH B . G 4 HOH 101 819 819 HOH HOH B . G 4 HOH 102 820 820 HOH HOH B . G 4 HOH 103 821 821 HOH HOH B . G 4 HOH 104 826 826 HOH HOH B . G 4 HOH 105 827 827 HOH HOH B . G 4 HOH 106 830 830 HOH HOH B . G 4 HOH 107 832 832 HOH HOH B . G 4 HOH 108 834 834 HOH HOH B . G 4 HOH 109 835 835 HOH HOH B . G 4 HOH 110 840 840 HOH HOH B . G 4 HOH 111 841 841 HOH HOH B . G 4 HOH 112 844 844 HOH HOH B . G 4 HOH 113 846 846 HOH HOH B . G 4 HOH 114 849 849 HOH HOH B . G 4 HOH 115 850 850 HOH HOH B . G 4 HOH 116 851 851 HOH HOH B . G 4 HOH 117 852 852 HOH HOH B . G 4 HOH 118 853 853 HOH HOH B . G 4 HOH 119 857 857 HOH HOH B . G 4 HOH 120 863 863 HOH HOH B . G 4 HOH 121 864 864 HOH HOH B . G 4 HOH 122 865 865 HOH HOH B . G 4 HOH 123 866 866 HOH HOH B . G 4 HOH 124 867 867 HOH HOH B . G 4 HOH 125 873 873 HOH HOH B . G 4 HOH 126 874 874 HOH HOH B . G 4 HOH 127 875 875 HOH HOH B . G 4 HOH 128 879 879 HOH HOH B . G 4 HOH 129 880 880 HOH HOH B . G 4 HOH 130 883 883 HOH HOH B . G 4 HOH 131 884 884 HOH HOH B . G 4 HOH 132 887 887 HOH HOH B . G 4 HOH 133 889 889 HOH HOH B . G 4 HOH 134 890 890 HOH HOH B . G 4 HOH 135 897 897 HOH HOH B . G 4 HOH 136 899 899 HOH HOH B . G 4 HOH 137 901 901 HOH HOH B . G 4 HOH 138 903 903 HOH HOH B . G 4 HOH 139 906 906 HOH HOH B . G 4 HOH 140 909 909 HOH HOH B . G 4 HOH 141 911 911 HOH HOH B . G 4 HOH 142 912 912 HOH HOH B . G 4 HOH 143 913 913 HOH HOH B . G 4 HOH 144 919 919 HOH HOH B . G 4 HOH 145 920 920 HOH HOH B . G 4 HOH 146 923 923 HOH HOH B . G 4 HOH 147 924 924 HOH HOH B . G 4 HOH 148 925 925 HOH HOH B . G 4 HOH 149 927 927 HOH HOH B . G 4 HOH 150 932 932 HOH HOH B . G 4 HOH 151 936 936 HOH HOH B . G 4 HOH 152 940 940 HOH HOH B . G 4 HOH 153 947 947 HOH HOH B . G 4 HOH 154 954 954 HOH HOH B . G 4 HOH 155 955 955 HOH HOH B . G 4 HOH 156 956 956 HOH HOH B . G 4 HOH 157 957 957 HOH HOH B . G 4 HOH 158 958 958 HOH HOH B . G 4 HOH 159 959 959 HOH HOH B . G 4 HOH 160 960 960 HOH HOH B . G 4 HOH 161 961 961 HOH HOH B . G 4 HOH 162 962 962 HOH HOH B . G 4 HOH 163 963 963 HOH HOH B . G 4 HOH 164 964 964 HOH HOH B . G 4 HOH 165 965 965 HOH HOH B . G 4 HOH 166 966 966 HOH HOH B . G 4 HOH 167 967 967 HOH HOH B . G 4 HOH 168 968 968 HOH HOH B . G 4 HOH 169 969 969 HOH HOH B . G 4 HOH 170 970 970 HOH HOH B . G 4 HOH 171 972 972 HOH HOH B . G 4 HOH 172 974 974 HOH HOH B . G 4 HOH 173 981 981 HOH HOH B . G 4 HOH 174 987 987 HOH HOH B . G 4 HOH 175 988 988 HOH HOH B . G 4 HOH 176 989 989 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 15 A MSE 431 ? MET SELENOMETHIONINE 2 A MSE 84 A MSE 500 ? MET SELENOMETHIONINE 3 A MSE 103 A MSE 519 ? MET SELENOMETHIONINE 4 B MSE 15 B MSE 431 ? MET SELENOMETHIONINE 5 B MSE 84 B MSE 500 ? MET SELENOMETHIONINE 6 B MSE 103 B MSE 519 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-08-10 4 'Structure model' 1 3 2015-10-21 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_struct_assembly_auth_evidence 2 5 'Structure model' software 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 SCALA 3.3.15 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3S6E _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 418-530 OF THE TARGET SEQUENCE. NUMBERING IS BASED ON ISOFORM 1 OF UNIPROTKB Q8VH51. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 SER _pdbx_validate_rmsd_angle.auth_seq_id_1 469 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 SER _pdbx_validate_rmsd_angle.auth_seq_id_2 469 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 B _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ALA _pdbx_validate_rmsd_angle.auth_seq_id_3 470 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 132.25 _pdbx_validate_rmsd_angle.angle_target_value 117.20 _pdbx_validate_rmsd_angle.angle_deviation 15.05 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 457 ? ? -135.88 -109.33 2 1 HIS B 457 ? ? -130.71 -98.62 3 1 ALA B 470 ? B 41.88 15.18 4 1 GLN B 471 ? ? -156.57 9.86 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 530 ? NE ? A ARG 114 NE 2 1 Y 1 A ARG 530 ? CZ ? A ARG 114 CZ 3 1 Y 1 A ARG 530 ? NH1 ? A ARG 114 NH1 4 1 Y 1 A ARG 530 ? NH2 ? A ARG 114 NH2 5 1 Y 1 B GLN 419 ? CG ? B GLN 3 CG 6 1 Y 1 B GLN 419 ? CD ? B GLN 3 CD 7 1 Y 1 B GLN 419 ? OE1 ? B GLN 3 OE1 8 1 Y 1 B GLN 419 ? NE2 ? B GLN 3 NE2 9 1 Y 1 B GLN 435 ? CG ? B GLN 19 CG 10 1 Y 1 B GLN 435 ? CD ? B GLN 19 CD 11 1 Y 1 B GLN 435 ? OE1 ? B GLN 19 OE1 12 1 Y 1 B GLN 435 ? NE2 ? B GLN 19 NE2 13 1 Y 1 B GLU 445 ? CD ? B GLU 29 CD 14 1 Y 1 B GLU 445 ? OE1 ? B GLU 29 OE1 15 1 Y 1 B GLU 445 ? OE2 ? B GLU 29 OE2 16 1 Y 1 B ARG 529 ? CG ? B ARG 113 CG 17 1 Y 1 B ARG 529 ? CD ? B ARG 113 CD 18 1 Y 1 B ARG 529 ? NE ? B ARG 113 NE 19 1 Y 1 B ARG 529 ? CZ ? B ARG 113 CZ 20 1 Y 1 B ARG 529 ? NH1 ? B ARG 113 NH1 21 1 Y 1 B ARG 529 ? NH2 ? B ARG 113 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 3 1 Y 1 B VAL 418 ? B VAL 2 4 1 Y 1 B ARG 530 ? B ARG 114 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'CITRIC ACID' CIT 4 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 2 'gel filtration' ? #