data_3S8J # _entry.id 3S8J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3S8J RCSB RCSB065895 WWPDB D_1000065895 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3S8K _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3S8J _pdbx_database_status.recvd_initial_deposition_date 2011-05-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Garcia-Pino, A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'The plasticity of the beta-Trefoil fold constitutes an evolutionary platform for protease inhibition' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 43726 _citation.page_last 43734 _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22027836 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.291310 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Azarkan, M.' 1 ? primary 'Martinez-Rodriguez, S.' 2 ? primary 'Buts, L.' 3 ? primary 'Baeyens-Volant, D.' 4 ? primary 'Garcia-Pino, A.' 5 ? # _cell.entry_id 3S8J _cell.length_a 74.699 _cell.length_b 74.699 _cell.length_c 78.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S8J _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Latex serine proteinase inhibitor' 20682.906 2 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 5 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 6 water nat water 18.015 91 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VAPKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIFSAIKNVKDNIVRESVDLN VKFNITINCNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFF DKYRIRRLILTNDAKEFVFIKTNR ; _entity_poly.pdbx_seq_one_letter_code_can ;VAPKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIFSAIKNVKDNIVRESVDLN VKFNITINCNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFF DKYRIRRLILTNDAKEFVFIKTNR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ALA n 1 3 PRO n 1 4 LYS n 1 5 PRO n 1 6 ILE n 1 7 VAL n 1 8 ASP n 1 9 ILE n 1 10 ASP n 1 11 GLY n 1 12 LYS n 1 13 PRO n 1 14 VAL n 1 15 LEU n 1 16 TYR n 1 17 GLY n 1 18 VAL n 1 19 ASP n 1 20 TYR n 1 21 PHE n 1 22 VAL n 1 23 VAL n 1 24 SER n 1 25 ALA n 1 26 ILE n 1 27 TRP n 1 28 GLY n 1 29 ALA n 1 30 GLY n 1 31 GLY n 1 32 GLY n 1 33 GLY n 1 34 LEU n 1 35 THR n 1 36 VAL n 1 37 TYR n 1 38 GLY n 1 39 PRO n 1 40 GLY n 1 41 ASN n 1 42 LYS n 1 43 LYS n 1 44 LYS n 1 45 CYS n 1 46 PRO n 1 47 LEU n 1 48 SER n 1 49 VAL n 1 50 VAL n 1 51 GLN n 1 52 ASP n 1 53 PRO n 1 54 PHE n 1 55 ASP n 1 56 ASN n 1 57 GLY n 1 58 GLU n 1 59 PRO n 1 60 ILE n 1 61 ILE n 1 62 PHE n 1 63 SER n 1 64 ALA n 1 65 ILE n 1 66 LYS n 1 67 ASN n 1 68 VAL n 1 69 LYS n 1 70 ASP n 1 71 ASN n 1 72 ILE n 1 73 VAL n 1 74 ARG n 1 75 GLU n 1 76 SER n 1 77 VAL n 1 78 ASP n 1 79 LEU n 1 80 ASN n 1 81 VAL n 1 82 LYS n 1 83 PHE n 1 84 ASN n 1 85 ILE n 1 86 THR n 1 87 ILE n 1 88 ASN n 1 89 CYS n 1 90 ASN n 1 91 GLU n 1 92 THR n 1 93 THR n 1 94 ALA n 1 95 TRP n 1 96 LYS n 1 97 VAL n 1 98 ASP n 1 99 ARG n 1 100 PHE n 1 101 PRO n 1 102 GLY n 1 103 VAL n 1 104 ILE n 1 105 GLY n 1 106 TRP n 1 107 THR n 1 108 VAL n 1 109 THR n 1 110 LEU n 1 111 GLY n 1 112 GLY n 1 113 GLU n 1 114 LYS n 1 115 GLY n 1 116 TYR n 1 117 HIS n 1 118 GLY n 1 119 PHE n 1 120 GLU n 1 121 SER n 1 122 THR n 1 123 HIS n 1 124 SER n 1 125 MET n 1 126 PHE n 1 127 LYS n 1 128 ILE n 1 129 LYS n 1 130 LYS n 1 131 ALA n 1 132 GLY n 1 133 LEU n 1 134 PRO n 1 135 PHE n 1 136 SER n 1 137 TYR n 1 138 LYS n 1 139 PHE n 1 140 HIS n 1 141 PHE n 1 142 CYS n 1 143 PRO n 1 144 SER n 1 145 TYR n 1 146 PRO n 1 147 ARG n 1 148 THR n 1 149 ARG n 1 150 LEU n 1 151 ILE n 1 152 PRO n 1 153 CYS n 1 154 ASN n 1 155 ASN n 1 156 VAL n 1 157 ASP n 1 158 ILE n 1 159 PHE n 1 160 PHE n 1 161 ASP n 1 162 LYS n 1 163 TYR n 1 164 ARG n 1 165 ILE n 1 166 ARG n 1 167 ARG n 1 168 LEU n 1 169 ILE n 1 170 LEU n 1 171 THR n 1 172 ASN n 1 173 ASP n 1 174 ALA n 1 175 LYS n 1 176 GLU n 1 177 PHE n 1 178 VAL n 1 179 PHE n 1 180 ILE n 1 181 LYS n 1 182 THR n 1 183 ASN n 1 184 ARG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name mamon _entity_src_nat.pdbx_organism_scientific 'Carica papaya' _entity_src_nat.pdbx_ncbi_taxonomy_id 3649 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'PPI was extracted from C. papaya latex' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LSPI_CARPA _struct_ref.pdbx_db_accession P80691 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VAPKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIFSAIKNVKDNIVFESVDLN VKFNITINCNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFF DKYRIRRLILTNDAKEFVFIKTNR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S8J A 1 ? 184 ? P80691 1 ? 184 ? 1 184 2 1 3S8J B 1 ? 184 ? P80691 1 ? 184 ? 1 184 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S8J ARG A 74 ? UNP P80691 PHE 74 conflict 74 1 2 3S8J ARG B 74 ? UNP P80691 PHE 74 conflict 74 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3S8J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.08 _exptl_crystal.density_percent_sol 60.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.5 M sodium formate, 0.1 M sodium acetate, 0.1 M ammonium sulphate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2005-06-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9150 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7A' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9150 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3S8J _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 15.0 _reflns.d_resolution_high 2.600 _reflns.number_obs 15065 _reflns.number_all 15065 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.88 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3S8J _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15065 _refine.ls_number_reflns_all 15065 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.98 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 14.966 _refine.ls_d_res_high 2.600 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.1532 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1503 _refine.ls_R_factor_R_free 0.2131 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.30 _refine.ls_number_reflns_R_free 1251 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -2.7594 _refine.aniso_B[2][2] -2.7594 _refine.aniso_B[3][3] 5.5188 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.374 _refine.solvent_model_param_bsol 60.944 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values TWIN_LSQ_F _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML . _refine.pdbx_overall_phase_error 31.23 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2754 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 2905 _refine_hist.d_res_high 2.600 _refine_hist.d_res_low 14.966 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 2901 'X-RAY DIFFRACTION' ? f_angle_d 1.236 ? ? 3957 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.386 ? ? 994 'X-RAY DIFFRACTION' ? f_chiral_restr 0.081 ? ? 438 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 510 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.6236 2.7260 1433 0.2419 88.00 0.3364 . . 202 . . . . 'X-RAY DIFFRACTION' . 2.7260 2.8466 1459 0.2180 92.00 0.3318 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.8466 2.9919 1485 0.1895 92.00 0.2488 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.9919 3.1722 1460 0.1748 92.00 0.2185 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.1722 3.4057 1488 0.1607 92.00 0.2334 . . 126 . . . . 'X-RAY DIFFRACTION' . 3.4057 3.7278 1491 0.1484 92.00 0.1977 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.7278 4.2215 1455 0.1270 92.00 0.2020 . . 130 . . . . 'X-RAY DIFFRACTION' . 4.2215 5.1596 1483 0.1153 93.00 0.1899 . . 114 . . . . 'X-RAY DIFFRACTION' . 5.1596 9.2379 1444 0.1344 90.00 0.1874 . . 165 . . . . # _struct.entry_id 3S8J _struct.title 'Crystal structure of a papaya latex serine protease inhibitor (PPI) at 2.6A resolution' _struct.pdbx_descriptor 'Latex serine proteinase inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S8J _struct_keywords.pdbx_keywords 'HYDROLASE INHIBITOR' _struct_keywords.text 'Kunitz-STI fold, serine protease inhibitor, HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 5 ? M N N 6 ? N N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 119 ? MET A 125 ? PHE A 119 MET A 125 5 ? 7 HELX_P HELX_P2 2 TRP B 27 ? GLY B 31 ? TRP B 27 GLY B 31 5 ? 5 HELX_P HELX_P3 3 PHE B 119 ? MET B 125 ? PHE B 119 MET B 125 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 89 SG ? ? A CYS 45 A CYS 89 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 142 SG ? ? ? 1_555 A CYS 153 SG ? ? A CYS 142 A CYS 153 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf3 disulf ? ? B CYS 45 SG ? ? ? 1_555 B CYS 89 SG ? ? B CYS 45 B CYS 89 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf4 disulf ? ? B CYS 142 SG ? ? ? 1_555 B CYS 153 SG ? ? B CYS 142 B CYS 153 1_555 ? ? ? ? ? ? ? 2.042 ? ? covale1 covale one ? A ASN 84 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 84 A NAG 185 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation covale2 covale one ? B ASN 84 ND2 ? ? ? 1_555 G NAG . C1 ? ? B ASN 84 B NAG 185 1_555 ? ? ? ? ? ? ? 1.469 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 CYS 45 A . ? CYS 45 A PRO 46 A ? PRO 46 A 1 1.32 2 CYS 45 B . ? CYS 45 B PRO 46 B ? PRO 46 B 1 -1.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 4 ? F ? 4 ? G ? 2 ? H ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 20 ? SER A 24 ? TYR A 20 SER A 24 A 2 PHE A 177 ? LYS A 181 ? PHE A 177 LYS A 181 B 1 LEU A 34 ? TYR A 37 ? LEU A 34 TYR A 37 B 2 SER A 48 ? GLN A 51 ? SER A 48 GLN A 51 C 1 ILE A 60 ? ALA A 64 ? ILE A 60 ALA A 64 C 2 LEU A 79 ? PHE A 83 ? LEU A 79 PHE A 83 D 1 LYS A 96 ? PHE A 100 ? LYS A 96 PHE A 100 D 2 VAL A 103 ? THR A 109 ? VAL A 103 THR A 109 E 1 LYS A 127 ? LYS A 130 ? LYS A 127 LYS A 130 E 2 TYR A 137 ? PHE A 141 ? TYR A 137 PHE A 141 E 3 ASN A 154 ? PHE A 160 ? ASN A 154 PHE A 160 E 4 ARG A 166 ? THR A 171 ? ARG A 166 THR A 171 F 1 ASN B 80 ? PHE B 83 ? ASN B 80 PHE B 83 F 2 ILE B 60 ? SER B 63 ? ILE B 60 SER B 63 F 3 ASP B 19 ? SER B 24 ? ASP B 19 SER B 24 F 4 PHE B 177 ? LYS B 181 ? PHE B 177 LYS B 181 G 1 LEU B 34 ? TYR B 37 ? LEU B 34 TYR B 37 G 2 SER B 48 ? GLN B 51 ? SER B 48 GLN B 51 H 1 LYS B 127 ? LYS B 130 ? LYS B 127 LYS B 130 H 2 TYR B 137 ? PHE B 141 ? TYR B 137 PHE B 141 H 3 ASN B 154 ? PHE B 160 ? ASN B 154 PHE B 160 H 4 ARG B 166 ? THR B 171 ? ARG B 166 THR B 171 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 23 ? N VAL A 23 O VAL A 178 ? O VAL A 178 B 1 2 N THR A 35 ? N THR A 35 O VAL A 50 ? O VAL A 50 C 1 2 N ILE A 61 ? N ILE A 61 O LYS A 82 ? O LYS A 82 D 1 2 N LYS A 96 ? N LYS A 96 O THR A 109 ? O THR A 109 E 1 2 N LYS A 127 ? N LYS A 127 O HIS A 140 ? O HIS A 140 E 2 3 N PHE A 141 ? N PHE A 141 O ASN A 154 ? O ASN A 154 E 3 4 N ASN A 155 ? N ASN A 155 O THR A 171 ? O THR A 171 F 1 2 O LYS B 82 ? O LYS B 82 N ILE B 61 ? N ILE B 61 F 2 3 O ILE B 60 ? O ILE B 60 N TYR B 20 ? N TYR B 20 F 3 4 N VAL B 23 ? N VAL B 23 O VAL B 178 ? O VAL B 178 G 1 2 N TYR B 37 ? N TYR B 37 O SER B 48 ? O SER B 48 H 1 2 N LYS B 127 ? N LYS B 127 O HIS B 140 ? O HIS B 140 H 2 3 N PHE B 139 ? N PHE B 139 O VAL B 156 ? O VAL B 156 H 3 4 N PHE B 159 ? N PHE B 159 O ARG B 167 ? O ARG B 167 # _database_PDB_matrix.entry_id 3S8J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3S8J _atom_sites.fract_transf_matrix[1][1] 0.013387 _atom_sites.fract_transf_matrix[1][2] 0.007729 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015458 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012663 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 TRP 27 27 27 TRP TRP A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 TRP 95 95 95 TRP TRP A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 TRP 106 106 106 TRP TRP A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 MET 125 125 125 MET MET A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 CYS 142 142 142 CYS CYS A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 TYR 145 145 145 TYR TYR A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 CYS 153 153 153 CYS CYS A . n A 1 154 ASN 154 154 154 ASN ASN A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 TYR 163 163 163 TYR TYR A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 PHE 179 179 179 PHE PHE A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 ASN 183 183 183 ASN ASN A . n A 1 184 ARG 184 184 ? ? ? A . n B 1 1 VAL 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 PRO 3 3 3 PRO PRO B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 PRO 5 5 5 PRO PRO B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 VAL 7 7 7 VAL VAL B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 ILE 9 9 9 ILE ILE B . n B 1 10 ASP 10 10 10 ASP ASP B . n B 1 11 GLY 11 11 11 GLY GLY B . n B 1 12 LYS 12 12 12 LYS LYS B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 TYR 16 16 16 TYR TYR B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 TYR 20 20 20 TYR TYR B . n B 1 21 PHE 21 21 21 PHE PHE B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 TRP 27 27 27 TRP TRP B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 THR 35 35 35 THR THR B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 TYR 37 37 37 TYR TYR B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 LYS 42 42 42 LYS LYS B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 CYS 45 45 45 CYS CYS B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 SER 48 48 48 SER SER B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 GLN 51 51 51 GLN GLN B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 PRO 53 53 53 PRO PRO B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 ASP 55 55 55 ASP ASP B . n B 1 56 ASN 56 56 56 ASN ASN B . n B 1 57 GLY 57 57 57 GLY GLY B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 PHE 62 62 62 PHE PHE B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 ASP 70 70 70 ASP ASP B . n B 1 71 ASN 71 71 71 ASN ASN B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 VAL 73 73 73 VAL VAL B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 GLU 75 75 75 GLU GLU B . n B 1 76 SER 76 76 76 SER SER B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 ASP 78 78 78 ASP ASP B . n B 1 79 LEU 79 79 79 LEU LEU B . n B 1 80 ASN 80 80 80 ASN ASN B . n B 1 81 VAL 81 81 81 VAL VAL B . n B 1 82 LYS 82 82 82 LYS LYS B . n B 1 83 PHE 83 83 83 PHE PHE B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 THR 86 86 86 THR THR B . n B 1 87 ILE 87 87 87 ILE ILE B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 CYS 89 89 89 CYS CYS B . n B 1 90 ASN 90 90 90 ASN ASN B . n B 1 91 GLU 91 91 91 GLU GLU B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 ALA 94 94 94 ALA ALA B . n B 1 95 TRP 95 95 95 TRP TRP B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 VAL 97 97 97 VAL VAL B . n B 1 98 ASP 98 98 98 ASP ASP B . n B 1 99 ARG 99 99 99 ARG ARG B . n B 1 100 PHE 100 100 100 PHE PHE B . n B 1 101 PRO 101 101 101 PRO PRO B . n B 1 102 GLY 102 102 102 GLY GLY B . n B 1 103 VAL 103 103 103 VAL VAL B . n B 1 104 ILE 104 104 104 ILE ILE B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 TRP 106 106 106 TRP TRP B . n B 1 107 THR 107 107 107 THR THR B . n B 1 108 VAL 108 108 108 VAL VAL B . n B 1 109 THR 109 109 109 THR THR B . n B 1 110 LEU 110 110 110 LEU LEU B . n B 1 111 GLY 111 111 111 GLY GLY B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 GLU 113 113 113 GLU GLU B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 HIS 117 117 117 HIS HIS B . n B 1 118 GLY 118 118 118 GLY GLY B . n B 1 119 PHE 119 119 119 PHE PHE B . n B 1 120 GLU 120 120 120 GLU GLU B . n B 1 121 SER 121 121 121 SER SER B . n B 1 122 THR 122 122 122 THR THR B . n B 1 123 HIS 123 123 123 HIS HIS B . n B 1 124 SER 124 124 124 SER SER B . n B 1 125 MET 125 125 125 MET MET B . n B 1 126 PHE 126 126 126 PHE PHE B . n B 1 127 LYS 127 127 127 LYS LYS B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 LYS 129 129 129 LYS LYS B . n B 1 130 LYS 130 130 130 LYS LYS B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 GLY 132 132 132 GLY GLY B . n B 1 133 LEU 133 133 133 LEU LEU B . n B 1 134 PRO 134 134 134 PRO PRO B . n B 1 135 PHE 135 135 135 PHE PHE B . n B 1 136 SER 136 136 136 SER SER B . n B 1 137 TYR 137 137 137 TYR TYR B . n B 1 138 LYS 138 138 138 LYS LYS B . n B 1 139 PHE 139 139 139 PHE PHE B . n B 1 140 HIS 140 140 140 HIS HIS B . n B 1 141 PHE 141 141 141 PHE PHE B . n B 1 142 CYS 142 142 142 CYS CYS B . n B 1 143 PRO 143 143 143 PRO PRO B . n B 1 144 SER 144 144 144 SER SER B . n B 1 145 TYR 145 145 145 TYR TYR B . n B 1 146 PRO 146 146 146 PRO PRO B . n B 1 147 ARG 147 147 147 ARG ARG B . n B 1 148 THR 148 148 148 THR THR B . n B 1 149 ARG 149 149 149 ARG ARG B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 ILE 151 151 151 ILE ILE B . n B 1 152 PRO 152 152 152 PRO PRO B . n B 1 153 CYS 153 153 153 CYS CYS B . n B 1 154 ASN 154 154 154 ASN ASN B . n B 1 155 ASN 155 155 155 ASN ASN B . n B 1 156 VAL 156 156 156 VAL VAL B . n B 1 157 ASP 157 157 157 ASP ASP B . n B 1 158 ILE 158 158 158 ILE ILE B . n B 1 159 PHE 159 159 159 PHE PHE B . n B 1 160 PHE 160 160 160 PHE PHE B . n B 1 161 ASP 161 161 161 ASP ASP B . n B 1 162 LYS 162 162 162 LYS LYS B . n B 1 163 TYR 163 163 163 TYR TYR B . n B 1 164 ARG 164 164 164 ARG ARG B . n B 1 165 ILE 165 165 165 ILE ILE B . n B 1 166 ARG 166 166 166 ARG ARG B . n B 1 167 ARG 167 167 167 ARG ARG B . n B 1 168 LEU 168 168 168 LEU LEU B . n B 1 169 ILE 169 169 169 ILE ILE B . n B 1 170 LEU 170 170 170 LEU LEU B . n B 1 171 THR 171 171 171 THR THR B . n B 1 172 ASN 172 172 172 ASN ASN B . n B 1 173 ASP 173 173 173 ASP ASP B . n B 1 174 ALA 174 174 174 ALA ALA B . n B 1 175 LYS 175 175 175 LYS LYS B . n B 1 176 GLU 176 176 176 GLU GLU B . n B 1 177 PHE 177 177 177 PHE PHE B . n B 1 178 VAL 178 178 178 VAL VAL B . n B 1 179 PHE 179 179 179 PHE PHE B . n B 1 180 ILE 180 180 180 ILE ILE B . n B 1 181 LYS 181 181 181 LYS LYS B . n B 1 182 THR 182 182 182 THR THR B . n B 1 183 ASN 183 183 183 ASN ASN B . n B 1 184 ARG 184 184 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 185 1 NAG NAG A . D 3 ACT 1 186 3 ACT ACT A . E 4 GOL 1 187 1 GOL GOL A . F 5 FMT 1 188 1 FMT FMT A . G 2 NAG 1 185 101 NAG NAG B . H 3 ACT 1 186 1 ACT ACT B . I 3 ACT 1 187 2 ACT ACT B . J 3 ACT 1 188 4 ACT ACT B . K 3 ACT 1 189 5 ACT ACT B . L 5 FMT 1 190 2 FMT FMT B . M 6 HOH 1 189 4 HOH HOH A . M 6 HOH 2 190 5 HOH HOH A . M 6 HOH 3 191 6 HOH HOH A . M 6 HOH 4 192 8 HOH HOH A . M 6 HOH 5 193 9 HOH HOH A . M 6 HOH 6 194 10 HOH HOH A . M 6 HOH 7 195 12 HOH HOH A . M 6 HOH 8 196 14 HOH HOH A . M 6 HOH 9 197 15 HOH HOH A . M 6 HOH 10 198 16 HOH HOH A . M 6 HOH 11 199 18 HOH HOH A . M 6 HOH 12 200 20 HOH HOH A . M 6 HOH 13 201 21 HOH HOH A . M 6 HOH 14 202 22 HOH HOH A . M 6 HOH 15 203 25 HOH HOH A . M 6 HOH 16 204 32 HOH HOH A . M 6 HOH 17 205 33 HOH HOH A . M 6 HOH 18 206 34 HOH HOH A . M 6 HOH 19 207 35 HOH HOH A . M 6 HOH 20 208 36 HOH HOH A . M 6 HOH 21 209 37 HOH HOH A . M 6 HOH 22 210 39 HOH HOH A . M 6 HOH 23 211 40 HOH HOH A . M 6 HOH 24 212 42 HOH HOH A . M 6 HOH 25 213 45 HOH HOH A . M 6 HOH 26 214 46 HOH HOH A . M 6 HOH 27 215 47 HOH HOH A . M 6 HOH 28 216 49 HOH HOH A . M 6 HOH 29 217 50 HOH HOH A . M 6 HOH 30 218 51 HOH HOH A . M 6 HOH 31 219 52 HOH HOH A . M 6 HOH 32 220 57 HOH HOH A . M 6 HOH 33 221 58 HOH HOH A . M 6 HOH 34 222 59 HOH HOH A . M 6 HOH 35 223 63 HOH HOH A . M 6 HOH 36 224 64 HOH HOH A . M 6 HOH 37 225 65 HOH HOH A . M 6 HOH 38 226 66 HOH HOH A . M 6 HOH 39 227 67 HOH HOH A . M 6 HOH 40 228 68 HOH HOH A . M 6 HOH 41 229 79 HOH HOH A . M 6 HOH 42 230 80 HOH HOH A . M 6 HOH 43 231 81 HOH HOH A . M 6 HOH 44 232 83 HOH HOH A . M 6 HOH 45 233 87 HOH HOH A . M 6 HOH 46 234 89 HOH HOH A . M 6 HOH 47 235 90 HOH HOH A . M 6 HOH 48 236 91 HOH HOH A . M 6 HOH 49 237 92 HOH HOH A . M 6 HOH 50 238 93 HOH HOH A . M 6 HOH 51 239 95 HOH HOH A . M 6 HOH 52 240 96 HOH HOH A . M 6 HOH 53 241 97 HOH HOH A . N 6 HOH 1 191 1 HOH HOH B . N 6 HOH 2 192 2 HOH HOH B . N 6 HOH 3 193 7 HOH HOH B . N 6 HOH 4 194 11 HOH HOH B . N 6 HOH 5 195 13 HOH HOH B . N 6 HOH 6 196 19 HOH HOH B . N 6 HOH 7 197 24 HOH HOH B . N 6 HOH 8 198 26 HOH HOH B . N 6 HOH 9 199 28 HOH HOH B . N 6 HOH 10 200 29 HOH HOH B . N 6 HOH 11 201 31 HOH HOH B . N 6 HOH 12 202 38 HOH HOH B . N 6 HOH 13 203 41 HOH HOH B . N 6 HOH 14 204 43 HOH HOH B . N 6 HOH 15 205 44 HOH HOH B . N 6 HOH 16 206 48 HOH HOH B . N 6 HOH 17 207 53 HOH HOH B . N 6 HOH 18 208 54 HOH HOH B . N 6 HOH 19 209 55 HOH HOH B . N 6 HOH 20 210 56 HOH HOH B . N 6 HOH 21 211 60 HOH HOH B . N 6 HOH 22 212 61 HOH HOH B . N 6 HOH 23 213 62 HOH HOH B . N 6 HOH 24 214 69 HOH HOH B . N 6 HOH 25 215 70 HOH HOH B . N 6 HOH 26 216 72 HOH HOH B . N 6 HOH 27 217 73 HOH HOH B . N 6 HOH 28 218 75 HOH HOH B . N 6 HOH 29 219 76 HOH HOH B . N 6 HOH 30 220 77 HOH HOH B . N 6 HOH 31 221 78 HOH HOH B . N 6 HOH 32 222 82 HOH HOH B . N 6 HOH 33 223 84 HOH HOH B . N 6 HOH 34 224 85 HOH HOH B . N 6 HOH 35 225 86 HOH HOH B . N 6 HOH 36 226 88 HOH HOH B . N 6 HOH 37 227 94 HOH HOH B . N 6 HOH 38 228 98 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 84 A ASN 84 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 84 B ASN 84 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,M 2 1 B,G,H,I,J,K,L,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-02 2 'Structure model' 1 1 2013-06-19 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' diffrn_source 4 4 'Structure model' entity 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_entity_nonpoly 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_chem_comp.type' 4 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 4 'Structure model' '_struct_conn.pdbx_role' 9 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -7.7992 -16.9252 -1.2804 0.3958 0.1652 0.4095 0.0235 0.0143 0.0031 1.7866 1.1946 2.3390 -0.1208 0.4740 -0.1520 0.2911 0.1498 -0.2756 0.0011 -0.0748 -0.0728 0.3542 0.0740 -0.1117 'X-RAY DIFFRACTION' 2 ? refined -22.9944 -10.3274 17.8529 0.6644 0.5770 0.3742 -0.0071 0.0224 -0.0317 3.1108 1.2171 7.2274 -1.6531 -1.4378 -0.2872 -0.1640 -1.3754 0.1964 1.5504 0.2669 0.1329 0.3773 -0.6837 -0.2980 'X-RAY DIFFRACTION' 3 ? refined -15.1881 -7.6334 -0.3601 0.2614 0.2279 0.3259 0.0576 0.0097 0.0018 2.6430 1.9759 2.4854 -1.2514 -0.0206 0.1889 -0.0100 0.1690 -0.0448 0.0096 -0.1507 0.0677 -0.0971 -0.3742 0.1459 'X-RAY DIFFRACTION' 4 ? refined -8.6350 -6.3137 7.0869 0.4157 0.2433 0.4647 0.0048 -0.0107 -0.0209 1.0404 1.9732 1.8840 -0.4148 -0.2248 -1.0311 0.0610 -0.0857 -0.0508 0.0704 -0.1441 -0.3498 -0.1416 -0.0359 0.0911 'X-RAY DIFFRACTION' 5 ? refined -11.3982 -24.0267 31.0023 0.4320 0.2260 0.4361 -0.0644 -0.0251 0.0012 2.2991 1.7889 2.2473 -0.5353 -0.3908 -0.1033 0.2046 -0.1307 0.5243 0.2439 -0.2715 0.0588 -0.3269 0.1200 -0.0173 'X-RAY DIFFRACTION' 6 ? refined -21.4541 -23.8237 18.2492 0.6127 0.3302 0.3928 0.0407 -0.0983 0.0666 1.7485 3.8115 1.7033 0.2762 -0.0489 -0.3618 -0.2320 0.0057 0.1815 -0.8943 -0.0665 0.0365 -0.0369 -0.4353 0.2646 'X-RAY DIFFRACTION' 7 ? refined -19.8599 -28.7082 34.4176 0.3784 0.3021 0.3894 -0.0526 -0.0076 0.0327 2.9797 3.4468 3.9740 -0.0239 -0.0292 0.2417 0.1410 -0.3809 0.2339 0.0088 -0.2957 0.2003 -0.2285 -0.4028 0.1881 'X-RAY DIFFRACTION' 8 ? refined -16.1586 -35.4506 25.9604 0.3511 0.2781 0.3670 -0.1183 -0.0093 0.0068 0.6843 3.1610 1.6599 0.1888 -0.7344 -1.2856 -0.0282 -0.0587 -0.1052 -0.3107 -0.0678 0.0257 0.0595 -0.1243 0.0335 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resid 2:39)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resid 40:47)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resid 48:147)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain A and resid 148:183)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain B and resid 3:41)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain B and resid 42:54)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(chain B and resid 55:98)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(chain B and resid 99:183)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7_650)' ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O7 A NAG 185 ? ? O A HOH 220 ? ? 1.25 2 1 OE1 B GLU 75 ? ? O B HOH 191 ? ? 1.93 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 54 ? ? -135.51 -65.08 2 1 CYS A 142 ? ? -152.37 68.50 3 1 ASP A 173 ? ? -69.44 -179.13 4 1 ASN B 41 ? ? 47.53 -131.85 5 1 PHE B 54 ? ? -112.92 -71.53 6 1 LYS B 69 ? ? -50.39 -70.06 7 1 ASN B 71 ? ? 76.95 -3.17 8 1 ASP B 98 ? ? -66.63 -178.11 9 1 LYS B 114 ? ? -82.01 -73.11 10 1 PHE B 135 ? ? 67.72 -2.21 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 4 ? CG ? A LYS 4 CG 2 1 Y 1 A LYS 4 ? CD ? A LYS 4 CD 3 1 Y 1 A LYS 4 ? CE ? A LYS 4 CE 4 1 Y 1 A LYS 4 ? NZ ? A LYS 4 NZ 5 1 Y 1 A LYS 12 ? CG ? A LYS 12 CG 6 1 Y 1 A LYS 12 ? CD ? A LYS 12 CD 7 1 Y 1 A LYS 12 ? CE ? A LYS 12 CE 8 1 Y 1 A LYS 12 ? NZ ? A LYS 12 NZ 9 1 Y 1 A ILE 26 ? CD1 ? A ILE 26 CD1 10 1 Y 1 A LYS 42 ? CG ? A LYS 42 CG 11 1 Y 1 A LYS 42 ? CD ? A LYS 42 CD 12 1 Y 1 A LYS 42 ? CE ? A LYS 42 CE 13 1 Y 1 A LYS 42 ? NZ ? A LYS 42 NZ 14 1 Y 1 A LYS 43 ? CB ? A LYS 43 CB 15 1 Y 1 A LYS 43 ? CG ? A LYS 43 CG 16 1 Y 1 A LYS 43 ? CD ? A LYS 43 CD 17 1 Y 1 A LYS 43 ? CE ? A LYS 43 CE 18 1 Y 1 A LYS 43 ? NZ ? A LYS 43 NZ 19 1 Y 1 A LYS 44 ? CG ? A LYS 44 CG 20 1 Y 1 A LYS 44 ? CD ? A LYS 44 CD 21 1 Y 1 A LYS 44 ? CE ? A LYS 44 CE 22 1 Y 1 A LYS 44 ? NZ ? A LYS 44 NZ 23 1 Y 1 A LYS 66 ? CD ? A LYS 66 CD 24 1 Y 1 A LYS 66 ? CE ? A LYS 66 CE 25 1 Y 1 A LYS 66 ? NZ ? A LYS 66 NZ 26 1 Y 1 A ASN 67 ? CG ? A ASN 67 CG 27 1 Y 1 A ASN 67 ? OD1 ? A ASN 67 OD1 28 1 Y 1 A ASN 67 ? ND2 ? A ASN 67 ND2 29 1 Y 1 A LYS 69 ? CG ? A LYS 69 CG 30 1 Y 1 A LYS 69 ? CD ? A LYS 69 CD 31 1 Y 1 A LYS 69 ? CE ? A LYS 69 CE 32 1 Y 1 A LYS 69 ? NZ ? A LYS 69 NZ 33 1 Y 1 A ASN 90 ? CB ? A ASN 90 CB 34 1 Y 1 A ASN 90 ? CG ? A ASN 90 CG 35 1 Y 1 A ASN 90 ? OD1 ? A ASN 90 OD1 36 1 Y 1 A ASN 90 ? ND2 ? A ASN 90 ND2 37 1 Y 1 A LYS 114 ? CE ? A LYS 114 CE 38 1 Y 1 A LYS 114 ? NZ ? A LYS 114 NZ 39 1 Y 1 A LYS 130 ? CG ? A LYS 130 CG 40 1 Y 1 A LYS 130 ? CD ? A LYS 130 CD 41 1 Y 1 A LYS 130 ? CE ? A LYS 130 CE 42 1 Y 1 A LYS 130 ? NZ ? A LYS 130 NZ 43 1 Y 1 A LYS 138 ? CE ? A LYS 138 CE 44 1 Y 1 A LYS 138 ? NZ ? A LYS 138 NZ 45 1 Y 1 A LYS 162 ? CG ? A LYS 162 CG 46 1 Y 1 A LYS 162 ? CD ? A LYS 162 CD 47 1 Y 1 A LYS 162 ? CE ? A LYS 162 CE 48 1 Y 1 A LYS 162 ? NZ ? A LYS 162 NZ 49 1 Y 1 A ARG 164 ? CG ? A ARG 164 CG 50 1 Y 1 A ARG 164 ? CD ? A ARG 164 CD 51 1 Y 1 A ARG 164 ? NE ? A ARG 164 NE 52 1 Y 1 A ARG 164 ? CZ ? A ARG 164 CZ 53 1 Y 1 A ARG 164 ? NH1 ? A ARG 164 NH1 54 1 Y 1 A ARG 164 ? NH2 ? A ARG 164 NH2 55 1 Y 1 A ASN 172 ? CG ? A ASN 172 CG 56 1 Y 1 A ASN 172 ? OD1 ? A ASN 172 OD1 57 1 Y 1 A ASN 172 ? ND2 ? A ASN 172 ND2 58 1 Y 1 A ASN 183 ? CG ? A ASN 183 CG 59 1 Y 1 A ASN 183 ? OD1 ? A ASN 183 OD1 60 1 Y 1 A ASN 183 ? ND2 ? A ASN 183 ND2 61 1 Y 1 B LYS 4 ? CG ? B LYS 4 CG 62 1 Y 1 B LYS 4 ? CD ? B LYS 4 CD 63 1 Y 1 B LYS 4 ? CE ? B LYS 4 CE 64 1 Y 1 B LYS 4 ? NZ ? B LYS 4 NZ 65 1 Y 1 B ILE 9 ? CD1 ? B ILE 9 CD1 66 1 Y 1 B LYS 12 ? CG ? B LYS 12 CG 67 1 Y 1 B LYS 12 ? CD ? B LYS 12 CD 68 1 Y 1 B LYS 12 ? CE ? B LYS 12 CE 69 1 Y 1 B LYS 12 ? NZ ? B LYS 12 NZ 70 1 Y 1 B ALA 29 ? CB ? B ALA 29 CB 71 1 Y 1 B ASN 41 ? CG ? B ASN 41 CG 72 1 Y 1 B ASN 41 ? OD1 ? B ASN 41 OD1 73 1 Y 1 B ASN 41 ? ND2 ? B ASN 41 ND2 74 1 Y 1 B LYS 42 ? NZ ? B LYS 42 NZ 75 1 Y 1 B LYS 43 ? CG ? B LYS 43 CG 76 1 Y 1 B LYS 43 ? CD ? B LYS 43 CD 77 1 Y 1 B LYS 43 ? CE ? B LYS 43 CE 78 1 Y 1 B LYS 43 ? NZ ? B LYS 43 NZ 79 1 Y 1 B LYS 44 ? CG ? B LYS 44 CG 80 1 Y 1 B LYS 44 ? CD ? B LYS 44 CD 81 1 Y 1 B LYS 44 ? CE ? B LYS 44 CE 82 1 Y 1 B LYS 44 ? NZ ? B LYS 44 NZ 83 1 Y 1 B LYS 66 ? CD ? B LYS 66 CD 84 1 Y 1 B LYS 66 ? CE ? B LYS 66 CE 85 1 Y 1 B LYS 66 ? NZ ? B LYS 66 NZ 86 1 Y 1 B ASN 67 ? CG ? B ASN 67 CG 87 1 Y 1 B ASN 67 ? OD1 ? B ASN 67 OD1 88 1 Y 1 B ASN 67 ? ND2 ? B ASN 67 ND2 89 1 Y 1 B LYS 69 ? CG ? B LYS 69 CG 90 1 Y 1 B LYS 69 ? CD ? B LYS 69 CD 91 1 Y 1 B LYS 69 ? CE ? B LYS 69 CE 92 1 Y 1 B LYS 69 ? NZ ? B LYS 69 NZ 93 1 Y 1 B ASN 88 ? CG ? B ASN 88 CG 94 1 Y 1 B ASN 88 ? OD1 ? B ASN 88 OD1 95 1 Y 1 B ASN 88 ? ND2 ? B ASN 88 ND2 96 1 Y 1 B ASN 90 ? CB ? B ASN 90 CB 97 1 Y 1 B ASN 90 ? CG ? B ASN 90 CG 98 1 Y 1 B ASN 90 ? OD1 ? B ASN 90 OD1 99 1 Y 1 B ASN 90 ? ND2 ? B ASN 90 ND2 100 1 Y 1 B LYS 96 ? CG ? B LYS 96 CG 101 1 Y 1 B LYS 96 ? CD ? B LYS 96 CD 102 1 Y 1 B LYS 96 ? CE ? B LYS 96 CE 103 1 Y 1 B LYS 96 ? NZ ? B LYS 96 NZ 104 1 Y 1 B LYS 114 ? CG ? B LYS 114 CG 105 1 Y 1 B LYS 114 ? CD ? B LYS 114 CD 106 1 Y 1 B LYS 114 ? CE ? B LYS 114 CE 107 1 Y 1 B LYS 114 ? NZ ? B LYS 114 NZ 108 1 Y 1 B LYS 129 ? CD ? B LYS 129 CD 109 1 Y 1 B LYS 129 ? CE ? B LYS 129 CE 110 1 Y 1 B LYS 129 ? NZ ? B LYS 129 NZ 111 1 Y 1 B LYS 130 ? CD ? B LYS 130 CD 112 1 Y 1 B LYS 130 ? CE ? B LYS 130 CE 113 1 Y 1 B LYS 130 ? NZ ? B LYS 130 NZ 114 1 Y 1 B LYS 162 ? CG ? B LYS 162 CG 115 1 Y 1 B LYS 162 ? CD ? B LYS 162 CD 116 1 Y 1 B LYS 162 ? CE ? B LYS 162 CE 117 1 Y 1 B LYS 162 ? NZ ? B LYS 162 NZ 118 1 Y 1 B ASN 172 ? CG ? B ASN 172 CG 119 1 Y 1 B ASN 172 ? OD1 ? B ASN 172 OD1 120 1 Y 1 B ASN 172 ? ND2 ? B ASN 172 ND2 121 1 Y 1 B LYS 181 ? CG ? B LYS 181 CG 122 1 Y 1 B LYS 181 ? CD ? B LYS 181 CD 123 1 Y 1 B LYS 181 ? CE ? B LYS 181 CE 124 1 Y 1 B LYS 181 ? NZ ? B LYS 181 NZ 125 1 Y 1 B ASN 183 ? CG ? B ASN 183 CG 126 1 Y 1 B ASN 183 ? OD1 ? B ASN 183 OD1 127 1 Y 1 B ASN 183 ? ND2 ? B ASN 183 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 1 ? A VAL 1 2 1 Y 1 A ARG 184 ? A ARG 184 3 1 Y 1 B VAL 1 ? B VAL 1 4 1 Y 1 B ALA 2 ? B ALA 2 5 1 Y 1 B ARG 184 ? B ARG 184 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'ACETATE ION' ACT 4 GLYCEROL GOL 5 'FORMIC ACID' FMT 6 water HOH #