data_3S8Q # _entry.id 3S8Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S8Q pdb_00003s8q 10.2210/pdb3s8q/pdb NDB NA1152 ? ? RCSB RCSB065902 ? ? WWPDB D_1000065902 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-18 2 'Structure model' 1 1 2012-07-25 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3S8Q _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3CLC 'C.Esp1396I Tetramer Complex' unspecified PDB 3G5G 'C.Esp1396I, free protein' unspecified PDB 3FYA 'C.Esp1396I, free protein, R35A mutant' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McGeehan, J.E.' 1 'Ball, N.J.' 2 'Streeter, S.D.' 3 'Thresh, S.-J.' 4 'Kneale, G.G.' 5 # _citation.id primary _citation.title 'Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 4158 _citation.page_last 4167 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22210861 _citation.pdbx_database_id_DOI 10.1093/nar/gkr1250 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McGeehan, J.E.' 1 ? primary 'Ball, N.J.' 2 ? primary 'Streeter, S.D.' 3 ? primary 'Thresh, S.J.' 4 ? primary 'Kneale, G.G.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'R-M CONTROLLER PROTEIN' 9521.175 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*TP*GP*TP*GP*AP*CP*TP*TP*AP*TP*AP*GP*TP*CP*CP*GP*TP*G)-3') ; 5850.794 1 ? ? ? C.Esp1396I 3 polymer syn ;DNA (5'-D(*TP*CP*AP*CP*GP*GP*AP*CP*TP*AP*TP*AP*AP*GP*TP*CP*AP*CP*A)-3') ; 5797.788 1 ? ? ? DNA 4 water nat water 18.015 296 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; A,B ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DG)(DT)(DG)(DA)(DC)(DT)(DT)(DA)(DT)(DA)(DG)(DT)(DC)(DC)(DG)(DT)(DG)' ATGTGACTTATAGTCCGTG C ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DC)(DG)(DG)(DA)(DC)(DT)(DA)(DT)(DA)(DA)(DG)(DT)(DC)(DA)(DC)(DA)' TCACGGACTATAAGTCACA D ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 SER n 1 7 PHE n 1 8 LEU n 1 9 LEU n 1 10 SER n 1 11 LYS n 1 12 VAL n 1 13 SER n 1 14 PHE n 1 15 VAL n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ILE n 1 20 ARG n 1 21 LEU n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 MET n 1 26 THR n 1 27 GLN n 1 28 GLU n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 TYR n 1 33 LYS n 1 34 SER n 1 35 ASN n 1 36 LEU n 1 37 ASP n 1 38 ARG n 1 39 THR n 1 40 TYR n 1 41 ILE n 1 42 SER n 1 43 GLY n 1 44 ILE n 1 45 GLU n 1 46 ARG n 1 47 ASN n 1 48 SER n 1 49 ARG n 1 50 ASN n 1 51 LEU n 1 52 THR n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 LEU n 1 57 GLU n 1 58 LEU n 1 59 ILE n 1 60 MET n 1 61 LYS n 1 62 GLY n 1 63 LEU n 1 64 GLU n 1 65 VAL n 1 66 SER n 1 67 ASP n 1 68 VAL n 1 69 VAL n 1 70 PHE n 1 71 PHE n 1 72 GLU n 1 73 MET n 1 74 LEU n 1 75 ILE n 1 76 LYS n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 LYS n 1 81 HIS n 1 82 ASP n 2 1 DA n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DA n 2 7 DC n 2 8 DT n 2 9 DT n 2 10 DA n 2 11 DT n 2 12 DA n 2 13 DG n 2 14 DT n 2 15 DC n 2 16 DC n 2 17 DG n 2 18 DT n 2 19 DG n 3 1 DT n 3 2 DC n 3 3 DA n 3 4 DC n 3 5 DG n 3 6 DG n 3 7 DA n 3 8 DC n 3 9 DT n 3 10 DA n 3 11 DT n 3 12 DA n 3 13 DA n 3 14 DG n 3 15 DT n 3 16 DC n 3 17 DA n 3 18 DC n 3 19 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene esp1396IC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacter sp. RFL1396' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211595 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)Gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET23 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLU 5 2 2 GLU GLU A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 SER 13 10 10 SER SER A . n A 1 14 PHE 14 11 11 PHE PHE A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 LYS 18 15 15 LYS LYS A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 GLU 22 19 19 GLU GLU A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 TYR 32 29 29 TYR TYR A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 ASN 35 32 32 ASN ASN A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 ASN 50 47 47 ASN ASN A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 MET 60 57 57 MET MET A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 PHE 70 67 67 PHE PHE A . n A 1 71 PHE 71 68 68 PHE PHE A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 MET 73 70 70 MET MET A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 LYS 76 73 73 LYS LYS A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 HIS 81 78 ? ? ? A . n A 1 82 ASP 82 79 ? ? ? A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLU 5 2 ? ? ? B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 PHE 7 4 4 PHE PHE B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 SER 10 7 7 SER SER B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 SER 13 10 10 SER SER B . n B 1 14 PHE 14 11 11 PHE PHE B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 ILE 16 13 13 ILE ILE B . n B 1 17 LYS 17 14 14 LYS LYS B . n B 1 18 LYS 18 15 15 LYS LYS B . n B 1 19 ILE 19 16 16 ILE ILE B . n B 1 20 ARG 20 17 17 ARG ARG B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 GLU 22 19 19 GLU GLU B . n B 1 23 LYS 23 20 20 LYS LYS B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 MET 25 22 22 MET MET B . n B 1 26 THR 26 23 23 THR THR B . n B 1 27 GLN 27 24 24 GLN GLN B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 ASP 29 26 26 ASP ASP B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 ALA 31 28 28 ALA ALA B . n B 1 32 TYR 32 29 29 TYR TYR B . n B 1 33 LYS 33 30 30 LYS LYS B . n B 1 34 SER 34 31 31 SER SER B . n B 1 35 ASN 35 32 32 ASN ASN B . n B 1 36 LEU 36 33 33 LEU LEU B . n B 1 37 ASP 37 34 34 ASP ASP B . n B 1 38 ARG 38 35 35 ARG ARG B . n B 1 39 THR 39 36 36 THR THR B . n B 1 40 TYR 40 37 37 TYR TYR B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 SER 42 39 39 SER SER B . n B 1 43 GLY 43 40 40 GLY GLY B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 GLU 45 42 42 GLU GLU B . n B 1 46 ARG 46 43 43 ARG ARG B . n B 1 47 ASN 47 44 44 ASN ASN B . n B 1 48 SER 48 45 45 SER SER B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 ASN 50 47 47 ASN ASN B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 ILE 53 50 50 ILE ILE B . n B 1 54 LYS 54 51 51 LYS LYS B . n B 1 55 SER 55 52 52 SER SER B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 GLU 57 54 54 GLU GLU B . n B 1 58 LEU 58 55 55 LEU LEU B . n B 1 59 ILE 59 56 56 ILE ILE B . n B 1 60 MET 60 57 57 MET MET B . n B 1 61 LYS 61 58 58 LYS LYS B . n B 1 62 GLY 62 59 59 GLY GLY B . n B 1 63 LEU 63 60 60 LEU LEU B . n B 1 64 GLU 64 61 61 GLU GLU B . n B 1 65 VAL 65 62 62 VAL VAL B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 ASP 67 64 64 ASP ASP B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PHE 70 67 67 PHE PHE B . n B 1 71 PHE 71 68 68 PHE PHE B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 MET 73 70 70 MET MET B . n B 1 74 LEU 74 71 71 LEU LEU B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 LYS 76 73 73 LYS LYS B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 ILE 78 75 75 ILE ILE B . n B 1 79 LEU 79 76 76 LEU LEU B . n B 1 80 LYS 80 77 77 LYS LYS B . n B 1 81 HIS 81 78 78 HIS HIS B . n B 1 82 ASP 82 79 79 ASP ASP B . n C 2 1 DA 1 1 1 DA A C . n C 2 2 DT 2 2 2 DT T C . n C 2 3 DG 3 3 3 DG G C . n C 2 4 DT 4 4 4 DT T C . n C 2 5 DG 5 5 5 DG G C . n C 2 6 DA 6 6 6 DA A C . n C 2 7 DC 7 7 7 DC C C . n C 2 8 DT 8 8 8 DT T C . n C 2 9 DT 9 9 9 DT T C . n C 2 10 DA 10 10 10 DA A C . n C 2 11 DT 11 11 11 DT T C . n C 2 12 DA 12 12 12 DA A C . n C 2 13 DG 13 13 13 DG G C . n C 2 14 DT 14 14 14 DT T C . n C 2 15 DC 15 15 15 DC C C . n C 2 16 DC 16 16 16 DC C C . n C 2 17 DG 17 17 17 DG G C . n C 2 18 DT 18 18 18 DT T C . n C 2 19 DG 19 19 19 DG G C . n D 3 1 DT 1 1 1 DT T D . n D 3 2 DC 2 2 2 DC C D . n D 3 3 DA 3 3 3 DA A D . n D 3 4 DC 4 4 4 DC C D . n D 3 5 DG 5 5 5 DG G D . n D 3 6 DG 6 6 6 DG G D . n D 3 7 DA 7 7 7 DA A D . n D 3 8 DC 8 8 8 DC C D . n D 3 9 DT 9 9 9 DT T D . n D 3 10 DA 10 10 10 DA A D . n D 3 11 DT 11 11 11 DT T D . n D 3 12 DA 12 12 12 DA A D . n D 3 13 DA 13 13 13 DA A D . n D 3 14 DG 14 14 14 DG G D . n D 3 15 DT 15 15 15 DT T D . n D 3 16 DC 16 16 16 DC C D . n D 3 17 DA 17 17 17 DA A D . n D 3 18 DC 18 18 18 DC C D . n D 3 19 DA 19 19 19 DA A D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 80 3 HOH HOH A . E 4 HOH 2 81 6 HOH HOH A . E 4 HOH 3 82 7 HOH HOH A . E 4 HOH 4 83 8 HOH HOH A . E 4 HOH 5 84 84 HOH HOH A . E 4 HOH 6 85 12 HOH HOH A . E 4 HOH 7 86 86 HOH HOH A . E 4 HOH 8 87 13 HOH HOH A . E 4 HOH 9 88 17 HOH HOH A . E 4 HOH 10 89 20 HOH HOH A . E 4 HOH 11 90 90 HOH HOH A . E 4 HOH 12 91 21 HOH HOH A . E 4 HOH 13 92 23 HOH HOH A . E 4 HOH 14 93 93 HOH HOH A . E 4 HOH 15 94 25 HOH HOH A . E 4 HOH 16 95 40 HOH HOH A . E 4 HOH 17 96 46 HOH HOH A . E 4 HOH 18 97 97 HOH HOH A . E 4 HOH 19 98 49 HOH HOH A . E 4 HOH 20 99 56 HOH HOH A . E 4 HOH 21 100 100 HOH HOH A . E 4 HOH 22 101 61 HOH HOH A . E 4 HOH 23 102 79 HOH HOH A . E 4 HOH 24 106 106 HOH HOH A . E 4 HOH 25 110 110 HOH HOH A . E 4 HOH 26 111 111 HOH HOH A . E 4 HOH 27 113 113 HOH HOH A . E 4 HOH 28 122 122 HOH HOH A . E 4 HOH 29 127 127 HOH HOH A . E 4 HOH 30 128 128 HOH HOH A . E 4 HOH 31 134 134 HOH HOH A . E 4 HOH 32 140 140 HOH HOH A . E 4 HOH 33 141 141 HOH HOH A . E 4 HOH 34 145 145 HOH HOH A . E 4 HOH 35 146 146 HOH HOH A . E 4 HOH 36 147 147 HOH HOH A . E 4 HOH 37 148 148 HOH HOH A . E 4 HOH 38 150 150 HOH HOH A . E 4 HOH 39 155 155 HOH HOH A . E 4 HOH 40 158 158 HOH HOH A . E 4 HOH 41 160 160 HOH HOH A . E 4 HOH 42 161 161 HOH HOH A . E 4 HOH 43 162 162 HOH HOH A . E 4 HOH 44 165 165 HOH HOH A . E 4 HOH 45 171 171 HOH HOH A . E 4 HOH 46 172 172 HOH HOH A . E 4 HOH 47 173 173 HOH HOH A . E 4 HOH 48 177 177 HOH HOH A . E 4 HOH 49 183 183 HOH HOH A . E 4 HOH 50 193 193 HOH HOH A . E 4 HOH 51 194 194 HOH HOH A . E 4 HOH 52 195 195 HOH HOH A . E 4 HOH 53 198 198 HOH HOH A . E 4 HOH 54 199 199 HOH HOH A . E 4 HOH 55 206 206 HOH HOH A . E 4 HOH 56 209 209 HOH HOH A . E 4 HOH 57 210 210 HOH HOH A . E 4 HOH 58 219 219 HOH HOH A . E 4 HOH 59 221 221 HOH HOH A . E 4 HOH 60 222 222 HOH HOH A . E 4 HOH 61 227 227 HOH HOH A . E 4 HOH 62 228 228 HOH HOH A . E 4 HOH 63 229 229 HOH HOH A . E 4 HOH 64 231 231 HOH HOH A . E 4 HOH 65 239 239 HOH HOH A . E 4 HOH 66 243 243 HOH HOH A . E 4 HOH 67 247 247 HOH HOH A . E 4 HOH 68 254 254 HOH HOH A . E 4 HOH 69 256 256 HOH HOH A . E 4 HOH 70 258 258 HOH HOH A . E 4 HOH 71 259 259 HOH HOH A . E 4 HOH 72 262 262 HOH HOH A . E 4 HOH 73 271 271 HOH HOH A . E 4 HOH 74 279 279 HOH HOH A . E 4 HOH 75 286 286 HOH HOH A . E 4 HOH 76 289 289 HOH HOH A . E 4 HOH 77 290 290 HOH HOH A . E 4 HOH 78 291 291 HOH HOH A . E 4 HOH 79 293 293 HOH HOH A . E 4 HOH 80 294 294 HOH HOH A . E 4 HOH 81 295 295 HOH HOH A . E 4 HOH 82 296 296 HOH HOH A . F 4 HOH 1 80 1 HOH HOH B . F 4 HOH 2 81 81 HOH HOH B . F 4 HOH 3 82 82 HOH HOH B . F 4 HOH 4 83 83 HOH HOH B . F 4 HOH 5 84 2 HOH HOH B . F 4 HOH 6 85 85 HOH HOH B . F 4 HOH 7 86 4 HOH HOH B . F 4 HOH 8 87 5 HOH HOH B . F 4 HOH 9 88 9 HOH HOH B . F 4 HOH 10 89 89 HOH HOH B . F 4 HOH 11 90 10 HOH HOH B . F 4 HOH 12 91 91 HOH HOH B . F 4 HOH 13 92 15 HOH HOH B . F 4 HOH 14 93 16 HOH HOH B . F 4 HOH 15 94 18 HOH HOH B . F 4 HOH 16 95 95 HOH HOH B . F 4 HOH 17 96 96 HOH HOH B . F 4 HOH 18 97 19 HOH HOH B . F 4 HOH 19 98 98 HOH HOH B . F 4 HOH 20 99 99 HOH HOH B . F 4 HOH 21 100 22 HOH HOH B . F 4 HOH 22 101 101 HOH HOH B . F 4 HOH 23 102 24 HOH HOH B . F 4 HOH 24 103 103 HOH HOH B . F 4 HOH 25 104 104 HOH HOH B . F 4 HOH 26 105 105 HOH HOH B . F 4 HOH 27 106 35 HOH HOH B . F 4 HOH 28 107 36 HOH HOH B . F 4 HOH 29 108 43 HOH HOH B . F 4 HOH 30 109 45 HOH HOH B . F 4 HOH 31 110 54 HOH HOH B . F 4 HOH 32 111 55 HOH HOH B . F 4 HOH 33 112 112 HOH HOH B . F 4 HOH 34 113 57 HOH HOH B . F 4 HOH 35 114 62 HOH HOH B . F 4 HOH 36 115 115 HOH HOH B . F 4 HOH 37 116 116 HOH HOH B . F 4 HOH 38 117 63 HOH HOH B . F 4 HOH 39 118 64 HOH HOH B . F 4 HOH 40 119 119 HOH HOH B . F 4 HOH 41 120 120 HOH HOH B . F 4 HOH 42 121 69 HOH HOH B . F 4 HOH 43 122 76 HOH HOH B . F 4 HOH 44 123 74 HOH HOH B . F 4 HOH 45 124 124 HOH HOH B . F 4 HOH 46 125 125 HOH HOH B . F 4 HOH 47 129 129 HOH HOH B . F 4 HOH 48 130 130 HOH HOH B . F 4 HOH 49 131 131 HOH HOH B . F 4 HOH 50 133 133 HOH HOH B . F 4 HOH 51 136 136 HOH HOH B . F 4 HOH 52 152 152 HOH HOH B . F 4 HOH 53 153 153 HOH HOH B . F 4 HOH 54 154 154 HOH HOH B . F 4 HOH 55 157 157 HOH HOH B . F 4 HOH 56 163 163 HOH HOH B . F 4 HOH 57 166 166 HOH HOH B . F 4 HOH 58 167 167 HOH HOH B . F 4 HOH 59 179 179 HOH HOH B . F 4 HOH 60 182 182 HOH HOH B . F 4 HOH 61 187 187 HOH HOH B . F 4 HOH 62 188 188 HOH HOH B . F 4 HOH 63 189 189 HOH HOH B . F 4 HOH 64 191 191 HOH HOH B . F 4 HOH 65 202 202 HOH HOH B . F 4 HOH 66 203 203 HOH HOH B . F 4 HOH 67 205 205 HOH HOH B . F 4 HOH 68 207 207 HOH HOH B . F 4 HOH 69 211 211 HOH HOH B . F 4 HOH 70 215 215 HOH HOH B . F 4 HOH 71 216 216 HOH HOH B . F 4 HOH 72 230 230 HOH HOH B . F 4 HOH 73 232 232 HOH HOH B . F 4 HOH 74 234 234 HOH HOH B . F 4 HOH 75 235 235 HOH HOH B . F 4 HOH 76 237 237 HOH HOH B . F 4 HOH 77 242 242 HOH HOH B . F 4 HOH 78 249 249 HOH HOH B . F 4 HOH 79 251 251 HOH HOH B . F 4 HOH 80 260 260 HOH HOH B . F 4 HOH 81 261 261 HOH HOH B . F 4 HOH 82 269 269 HOH HOH B . F 4 HOH 83 270 270 HOH HOH B . F 4 HOH 84 277 277 HOH HOH B . F 4 HOH 85 281 281 HOH HOH B . F 4 HOH 86 283 283 HOH HOH B . G 4 HOH 1 27 27 HOH HOH C . G 4 HOH 2 28 28 HOH HOH C . G 4 HOH 3 29 29 HOH HOH C . G 4 HOH 4 41 41 HOH HOH C . G 4 HOH 5 51 51 HOH HOH C . G 4 HOH 6 52 52 HOH HOH C . G 4 HOH 7 53 53 HOH HOH C . G 4 HOH 8 60 60 HOH HOH C . G 4 HOH 9 65 65 HOH HOH C . G 4 HOH 10 67 67 HOH HOH C . G 4 HOH 11 70 70 HOH HOH C . G 4 HOH 12 71 71 HOH HOH C . G 4 HOH 13 73 73 HOH HOH C . G 4 HOH 14 75 75 HOH HOH C . G 4 HOH 15 78 78 HOH HOH C . G 4 HOH 16 80 80 HOH HOH C . G 4 HOH 17 107 107 HOH HOH C . G 4 HOH 18 108 108 HOH HOH C . G 4 HOH 19 109 109 HOH HOH C . G 4 HOH 20 114 114 HOH HOH C . G 4 HOH 21 117 117 HOH HOH C . G 4 HOH 22 121 121 HOH HOH C . G 4 HOH 23 123 123 HOH HOH C . G 4 HOH 24 135 135 HOH HOH C . G 4 HOH 25 139 139 HOH HOH C . G 4 HOH 26 143 143 HOH HOH C . G 4 HOH 27 144 144 HOH HOH C . G 4 HOH 28 149 149 HOH HOH C . G 4 HOH 29 156 156 HOH HOH C . G 4 HOH 30 159 159 HOH HOH C . G 4 HOH 31 164 164 HOH HOH C . G 4 HOH 32 170 170 HOH HOH C . G 4 HOH 33 174 174 HOH HOH C . G 4 HOH 34 176 176 HOH HOH C . G 4 HOH 35 178 178 HOH HOH C . G 4 HOH 36 180 180 HOH HOH C . G 4 HOH 37 186 186 HOH HOH C . G 4 HOH 38 190 190 HOH HOH C . G 4 HOH 39 196 196 HOH HOH C . G 4 HOH 40 200 200 HOH HOH C . G 4 HOH 41 201 201 HOH HOH C . G 4 HOH 42 204 204 HOH HOH C . G 4 HOH 43 208 208 HOH HOH C . G 4 HOH 44 214 214 HOH HOH C . G 4 HOH 45 217 217 HOH HOH C . G 4 HOH 46 220 220 HOH HOH C . G 4 HOH 47 223 223 HOH HOH C . G 4 HOH 48 224 224 HOH HOH C . G 4 HOH 49 225 225 HOH HOH C . G 4 HOH 50 233 233 HOH HOH C . G 4 HOH 51 236 236 HOH HOH C . G 4 HOH 52 244 244 HOH HOH C . G 4 HOH 53 246 246 HOH HOH C . G 4 HOH 54 248 248 HOH HOH C . G 4 HOH 55 253 253 HOH HOH C . G 4 HOH 56 255 255 HOH HOH C . G 4 HOH 57 257 257 HOH HOH C . G 4 HOH 58 263 263 HOH HOH C . G 4 HOH 59 264 264 HOH HOH C . G 4 HOH 60 266 266 HOH HOH C . G 4 HOH 61 280 280 HOH HOH C . G 4 HOH 62 282 282 HOH HOH C . G 4 HOH 63 287 287 HOH HOH C . H 4 HOH 1 20 11 HOH HOH D . H 4 HOH 2 21 14 HOH HOH D . H 4 HOH 3 26 26 HOH HOH D . H 4 HOH 4 30 30 HOH HOH D . H 4 HOH 5 31 31 HOH HOH D . H 4 HOH 6 32 32 HOH HOH D . H 4 HOH 7 33 33 HOH HOH D . H 4 HOH 8 34 34 HOH HOH D . H 4 HOH 9 37 37 HOH HOH D . H 4 HOH 10 38 38 HOH HOH D . H 4 HOH 11 39 39 HOH HOH D . H 4 HOH 12 42 42 HOH HOH D . H 4 HOH 13 44 44 HOH HOH D . H 4 HOH 14 47 47 HOH HOH D . H 4 HOH 15 48 48 HOH HOH D . H 4 HOH 16 50 50 HOH HOH D . H 4 HOH 17 58 58 HOH HOH D . H 4 HOH 18 59 59 HOH HOH D . H 4 HOH 19 66 66 HOH HOH D . H 4 HOH 20 68 68 HOH HOH D . H 4 HOH 21 72 72 HOH HOH D . H 4 HOH 22 77 77 HOH HOH D . H 4 HOH 23 87 87 HOH HOH D . H 4 HOH 24 88 88 HOH HOH D . H 4 HOH 25 92 92 HOH HOH D . H 4 HOH 26 94 94 HOH HOH D . H 4 HOH 27 102 102 HOH HOH D . H 4 HOH 28 118 118 HOH HOH D . H 4 HOH 29 126 126 HOH HOH D . H 4 HOH 30 132 132 HOH HOH D . H 4 HOH 31 137 137 HOH HOH D . H 4 HOH 32 138 138 HOH HOH D . H 4 HOH 33 142 142 HOH HOH D . H 4 HOH 34 151 151 HOH HOH D . H 4 HOH 35 168 168 HOH HOH D . H 4 HOH 36 169 169 HOH HOH D . H 4 HOH 37 175 175 HOH HOH D . H 4 HOH 38 181 181 HOH HOH D . H 4 HOH 39 184 184 HOH HOH D . H 4 HOH 40 185 185 HOH HOH D . H 4 HOH 41 192 192 HOH HOH D . H 4 HOH 42 197 197 HOH HOH D . H 4 HOH 43 212 212 HOH HOH D . H 4 HOH 44 213 213 HOH HOH D . H 4 HOH 45 218 218 HOH HOH D . H 4 HOH 46 226 226 HOH HOH D . H 4 HOH 47 238 238 HOH HOH D . H 4 HOH 48 240 240 HOH HOH D . H 4 HOH 49 241 241 HOH HOH D . H 4 HOH 50 245 245 HOH HOH D . H 4 HOH 51 250 250 HOH HOH D . H 4 HOH 52 252 252 HOH HOH D . H 4 HOH 53 265 265 HOH HOH D . H 4 HOH 54 267 267 HOH HOH D . H 4 HOH 55 268 268 HOH HOH D . H 4 HOH 56 272 272 HOH HOH D . H 4 HOH 57 273 273 HOH HOH D . H 4 HOH 58 274 274 HOH HOH D . H 4 HOH 59 275 275 HOH HOH D . H 4 HOH 60 276 276 HOH HOH D . H 4 HOH 61 278 278 HOH HOH D . H 4 HOH 62 284 284 HOH HOH D . H 4 HOH 63 285 285 HOH HOH D . H 4 HOH 64 288 288 HOH HOH D . H 4 HOH 65 292 292 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 77 ? CG ? A LYS 80 CG 2 1 Y 1 A LYS 77 ? CD ? A LYS 80 CD 3 1 Y 1 A LYS 77 ? CE ? A LYS 80 CE 4 1 Y 1 A LYS 77 ? NZ ? A LYS 80 NZ # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 1.3.3 'Tue Nov 14 15:28:12 2006' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MxCuBE . ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 44.316 _cell.length_b 61.546 _cell.length_c 113.687 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3S8Q _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.entry_id 3S8Q _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3S8Q _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2 M Sodium acetate, 0.1 m Bis-tris-propane, 20% w/v PEG 3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2008-07-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9334 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9334 _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 # _reflns.entry_id 3S8Q _reflns.d_resolution_high 2.100 _reflns.number_obs 17823 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_netI_over_sigmaI 14.660 _reflns.percent_possible_obs 94.600 _reflns.B_iso_Wilson_estimate 31.238 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 50 _reflns.number_all 17823 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.100 2.200 10623 ? 2321 0.478 4.110 ? ? ? ? 10623 96.600 1 1 2.200 2.300 8919 ? 1938 0.378 5.330 ? ? ? ? 8919 96.600 2 1 2.300 2.400 7439 ? 1622 0.299 6.550 ? ? ? ? 7439 96.300 3 1 2.400 2.500 6303 ? 1361 0.231 8.040 ? ? ? ? 6303 95.200 4 1 2.500 3.000 20536 ? 4436 0.134 12.170 ? ? ? ? 20536 95.100 5 1 3.000 4.000 16028 ? 3500 0.053 23.470 ? ? ? ? 16028 93.000 6 1 4.000 5.000 5773 ? 1269 0.040 31.620 ? ? ? ? 5773 92.700 7 1 5.000 6.000 2566 ? 572 0.037 30.650 ? ? ? ? 2566 92.900 8 1 6.000 8.000 1992 ? 453 0.033 31.440 ? ? ? ? 1992 90.200 9 1 8.000 10.000 706 ? 169 0.031 34.940 ? ? ? ? 706 89.400 10 1 10.000 15.000 477 ? 126 0.030 34.390 ? ? ? ? 477 84.600 11 1 15.000 ? 148 ? 56 0.036 27.040 ? ? ? ? 148 77.800 12 1 # _refine.entry_id 3S8Q _refine.ls_d_res_high 2.1000 _refine.ls_d_res_low 50.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 94.5800 _refine.ls_number_reflns_obs 17823 _refine.ls_number_reflns_all 17823 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1602 _refine.ls_R_factor_R_work 0.1572 _refine.ls_wR_factor_R_work 0.1500 _refine.ls_R_factor_R_free 0.2187 _refine.ls_wR_factor_R_free 0.2025 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 913 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 32.6100 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.1600 _refine.aniso_B[2][2] 2.4600 _refine.aniso_B[3][3] -1.3000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9360 _refine.overall_SU_R_Cruickshank_DPI 0.1917 _refine.overall_SU_R_free 0.1776 _refine.pdbx_overall_ESU_R_Free 0.1780 _refine.overall_SU_ML 0.1160 _refine.overall_SU_B 10.0580 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8634 _refine.B_iso_max 206.610 _refine.B_iso_min 12.870 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1243 _refine_hist.pdbx_number_atoms_nucleic_acid 773 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 296 _refine_hist.number_atoms_total 2312 _refine_hist.d_res_high 2.1000 _refine_hist.d_res_low 50.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2168 0.022 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3082 2.282 2.433 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 165 5.286 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 52 35.414 24.423 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 288 15.266 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8 17.531 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 361 0.124 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1305 0.010 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 790 1.003 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1294 1.735 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1378 2.603 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1785 3.538 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.1000 _refine_ls_shell.d_res_low 2.1540 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.2900 _refine_ls_shell.number_reflns_R_work 1262 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2020 _refine_ls_shell.R_factor_R_free 0.2950 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1330 _refine_ls_shell.number_reflns_obs 1262 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S8Q _struct.title 'Crystal structure of the R-M controller protein C.Esp1396I OL operator complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S8Q _struct_keywords.pdbx_keywords 'Protein binding/DNA' _struct_keywords.text 'Protein-DNA complex, Helix-turn-helix, Transcriptional Regulator, DNA-binding protein, Protein binding-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8GGH0_9ENTR Q8GGH0 1 MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD 1 ? 2 PDB 3S8Q 3S8Q 2 ATGTGACTTATAGTCCGTG ? ? 3 PDB 3S8Q 3S8Q 3 TCACGGACTATAAGTCACA ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S8Q A 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 2 1 3S8Q B 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 3 2 3S8Q C 1 ? 19 ? 3S8Q 1 ? 19 ? 1 19 4 3 3S8Q D 1 ? 19 ? 3S8Q 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S8Q GLY A 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 1 1 3S8Q SER A 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 2 1 3S8Q HIS A 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 3 2 3S8Q GLY B 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 4 2 3S8Q SER B 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 5 2 3S8Q HIS B 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6800 ? 1 MORE -41 ? 1 'SSA (A^2)' 12250 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? LYS A 23 ? SER A 3 LYS A 20 1 ? 18 HELX_P HELX_P2 2 THR A 26 ? ASN A 35 ? THR A 23 ASN A 32 1 ? 10 HELX_P HELX_P3 3 ASP A 37 ? ARG A 46 ? ASP A 34 ARG A 43 1 ? 10 HELX_P HELX_P4 4 THR A 52 ? LEU A 63 ? THR A 49 LEU A 60 1 ? 12 HELX_P HELX_P5 5 SER A 66 ? LYS A 80 ? SER A 63 LYS A 77 1 ? 15 HELX_P HELX_P6 6 SER B 6 ? LYS B 23 ? SER B 3 LYS B 20 1 ? 18 HELX_P HELX_P7 7 THR B 26 ? ASN B 35 ? THR B 23 ASN B 32 1 ? 10 HELX_P HELX_P8 8 ASP B 37 ? SER B 48 ? ASP B 34 SER B 45 1 ? 12 HELX_P HELX_P9 9 THR B 52 ? LEU B 63 ? THR B 49 LEU B 60 1 ? 12 HELX_P HELX_P10 10 SER B 66 ? LYS B 80 ? SER B 63 LYS B 77 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 19 N1 ? ? C DT 2 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 19 N6 ? ? C DT 2 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 18 N3 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 18 O2 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 18 N4 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 17 N1 ? ? C DT 4 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 17 N6 ? ? C DT 4 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 16 N3 ? ? C DG 5 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 16 O2 ? ? C DG 5 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 16 N4 ? ? C DG 5 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 15 N3 ? ? C DA 6 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 15 O4 ? ? C DA 6 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 14 N1 ? ? C DC 7 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 14 O6 ? ? C DC 7 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 14 N2 ? ? C DC 7 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 13 N1 ? ? C DT 8 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 13 N6 ? ? C DT 8 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 12 N1 ? ? C DT 9 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 12 N6 ? ? C DT 9 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 11 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 11 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 12 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 12 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 13 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 13 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 13 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 14 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 14 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 15 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 15 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 15 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 16 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 16 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 16 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 17 N1 ? ? ? 1_555 D DC 4 N3 ? ? C DG 17 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 17 N2 ? ? ? 1_555 D DC 4 O2 ? ? C DG 17 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DG 17 O6 ? ? ? 1_555 D DC 4 N4 ? ? C DG 17 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 18 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 18 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DT 18 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 18 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 19 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 19 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 19 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 19 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DG 19 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 19 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 179 ? ? O B HOH 215 ? ? 1.94 2 1 O D HOH 181 ? ? O D HOH 238 ? ? 1.97 3 1 O A HOH 106 ? ? O A HOH 286 ? ? 1.98 4 1 O C HOH 135 ? ? O C HOH 159 ? ? 2.02 5 1 O B HOH 260 ? ? O D HOH 226 ? ? 2.05 6 1 O D HOH 33 ? ? O D HOH 184 ? ? 2.12 7 1 O A HOH 90 ? ? O A HOH 155 ? ? 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 189 ? ? 1_555 O D HOH 273 ? ? 3_544 2.17 2 1 O A HOH 254 ? ? 1_555 O D HOH 288 ? ? 3_554 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DT 4 ? ? "C3'" C DT 4 ? ? 1.378 1.419 -0.041 0.006 N 2 1 N9 C DA 10 ? ? C4 C DA 10 ? ? 1.419 1.374 0.045 0.006 N 3 1 C6 C DA 12 ? ? N6 C DA 12 ? ? 1.385 1.335 0.050 0.008 N 4 1 C6 D DG 5 ? ? N1 D DG 5 ? ? 1.433 1.391 0.042 0.007 N 5 1 N9 D DA 7 ? ? C4 D DA 7 ? ? 1.411 1.374 0.037 0.006 N 6 1 C5 D DA 10 ? ? N7 D DA 10 ? ? 1.427 1.388 0.039 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 18 ? ? CG A LEU 18 ? ? CD1 A LEU 18 ? ? 100.62 111.00 -10.38 1.70 N 2 1 NE B ARG 35 ? ? CZ B ARG 35 ? ? NH2 B ARG 35 ? ? 124.43 120.30 4.13 0.50 N 3 1 NE B ARG 43 ? ? CZ B ARG 43 ? ? NH2 B ARG 43 ? ? 116.77 120.30 -3.53 0.50 N 4 1 CB B ASP 79 ? ? CG B ASP 79 ? ? OD1 B ASP 79 ? ? 111.39 118.30 -6.91 0.90 N 5 1 "O4'" C DA 1 ? ? "C1'" C DA 1 ? ? "C2'" C DA 1 ? ? 112.39 106.80 5.59 0.50 N 6 1 "O4'" C DT 2 ? ? "C1'" C DT 2 ? ? N1 C DT 2 ? ? 111.28 108.30 2.98 0.30 N 7 1 "O5'" C DG 3 ? ? "C5'" C DG 3 ? ? "C4'" C DG 3 ? ? 103.80 109.40 -5.60 0.80 N 8 1 "O4'" C DG 3 ? ? "C4'" C DG 3 ? ? "C3'" C DG 3 ? ? 101.77 104.50 -2.73 0.40 N 9 1 "C4'" C DG 3 ? ? "C3'" C DG 3 ? ? "C2'" C DG 3 ? ? 110.53 103.10 7.43 0.90 N 10 1 "O4'" C DG 5 ? ? "C1'" C DG 5 ? ? "C2'" C DG 5 ? ? 109.84 106.80 3.04 0.50 N 11 1 "O5'" C DA 6 ? ? "C5'" C DA 6 ? ? "C4'" C DA 6 ? ? 100.98 109.40 -8.42 0.80 N 12 1 "O4'" C DC 7 ? ? "C1'" C DC 7 ? ? "C2'" C DC 7 ? ? 110.07 106.80 3.27 0.50 N 13 1 "O4'" C DC 7 ? ? "C1'" C DC 7 ? ? N1 C DC 7 ? ? 110.19 108.30 1.89 0.30 N 14 1 C2 C DT 8 ? ? N3 C DT 8 ? ? C4 C DT 8 ? ? 123.53 127.20 -3.67 0.60 N 15 1 "O5'" C DT 9 ? ? P C DT 9 ? ? OP2 C DT 9 ? ? 99.94 105.70 -5.76 0.90 N 16 1 N1 C DA 10 ? ? C6 C DA 10 ? ? N6 C DA 10 ? ? 114.99 118.60 -3.61 0.60 N 17 1 "C3'" C DT 11 ? ? "C2'" C DT 11 ? ? "C1'" C DT 11 ? ? 93.07 102.40 -9.33 0.80 N 18 1 N3 C DT 11 ? ? C2 C DT 11 ? ? O2 C DT 11 ? ? 118.02 122.30 -4.28 0.60 N 19 1 C6 C DT 11 ? ? C5 C DT 11 ? ? C7 C DT 11 ? ? 118.73 122.90 -4.17 0.60 N 20 1 "O4'" C DA 12 ? ? "C1'" C DA 12 ? ? N9 C DA 12 ? ? 102.91 108.00 -5.09 0.70 N 21 1 N1 C DA 12 ? ? C2 C DA 12 ? ? N3 C DA 12 ? ? 124.74 129.30 -4.56 0.50 N 22 1 "O4'" C DG 13 ? ? "C1'" C DG 13 ? ? N9 C DG 13 ? ? 111.51 108.30 3.21 0.30 N 23 1 "C3'" C DG 13 ? ? "O3'" C DG 13 ? ? P C DT 14 ? ? 128.21 119.70 8.51 1.20 Y 24 1 "O4'" C DT 14 ? ? "C1'" C DT 14 ? ? "C2'" C DT 14 ? ? 110.64 106.80 3.84 0.50 N 25 1 "O4'" C DT 14 ? ? "C1'" C DT 14 ? ? N1 C DT 14 ? ? 103.29 108.00 -4.71 0.70 N 26 1 N3 C DT 14 ? ? C4 C DT 14 ? ? C5 C DT 14 ? ? 119.02 115.20 3.82 0.60 N 27 1 C5 C DT 14 ? ? C4 C DT 14 ? ? O4 C DT 14 ? ? 120.62 124.90 -4.28 0.70 N 28 1 "O5'" C DC 16 ? ? "C5'" C DC 16 ? ? "C4'" C DC 16 ? ? 103.45 109.40 -5.95 0.80 N 29 1 "O4'" C DG 19 ? ? "C4'" C DG 19 ? ? "C3'" C DG 19 ? ? 101.09 104.50 -3.41 0.40 N 30 1 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 112.11 108.30 3.81 0.30 N 31 1 C4 C DG 19 ? ? C5 C DG 19 ? ? N7 C DG 19 ? ? 107.59 110.80 -3.21 0.40 N 32 1 "O4'" D DT 1 ? ? "C1'" D DT 1 ? ? N1 D DT 1 ? ? 103.27 108.00 -4.73 0.70 N 33 1 N1 D DT 1 ? ? C2 D DT 1 ? ? O2 D DT 1 ? ? 128.67 123.10 5.57 0.80 N 34 1 "C3'" D DC 2 ? ? "O3'" D DC 2 ? ? P D DA 3 ? ? 127.03 119.70 7.33 1.20 Y 35 1 "O4'" D DC 4 ? ? "C4'" D DC 4 ? ? "C3'" D DC 4 ? ? 100.88 104.50 -3.62 0.40 N 36 1 "C1'" D DC 4 ? ? "O4'" D DC 4 ? ? "C4'" D DC 4 ? ? 103.04 110.10 -7.06 1.00 N 37 1 "O4'" D DG 5 ? ? "C1'" D DG 5 ? ? N9 D DG 5 ? ? 111.87 108.30 3.57 0.30 N 38 1 "O4'" D DG 6 ? ? "C1'" D DG 6 ? ? N9 D DG 6 ? ? 102.96 108.00 -5.04 0.70 N 39 1 "C3'" D DA 7 ? ? "O3'" D DA 7 ? ? P D DC 8 ? ? 131.97 119.70 12.27 1.20 Y 40 1 "C1'" D DC 8 ? ? "O4'" D DC 8 ? ? "C4'" D DC 8 ? ? 102.53 110.10 -7.57 1.00 N 41 1 "O4'" D DT 9 ? ? "C1'" D DT 9 ? ? N1 D DT 9 ? ? 103.22 108.00 -4.78 0.70 N 42 1 "O3'" D DT 9 ? ? P D DA 10 ? ? OP2 D DA 10 ? ? 117.46 110.50 6.96 1.10 Y 43 1 "O4'" D DA 10 ? ? "C1'" D DA 10 ? ? "C2'" D DA 10 ? ? 110.57 106.80 3.77 0.50 N 44 1 "O4'" D DA 10 ? ? "C1'" D DA 10 ? ? N9 D DA 10 ? ? 103.38 108.00 -4.62 0.70 N 45 1 C8 D DA 10 ? ? N9 D DA 10 ? ? C4 D DA 10 ? ? 109.07 105.80 3.27 0.40 N 46 1 "C3'" D DA 10 ? ? "O3'" D DA 10 ? ? P D DT 11 ? ? 127.31 119.70 7.61 1.20 Y 47 1 "C3'" D DT 11 ? ? "C2'" D DT 11 ? ? "C1'" D DT 11 ? ? 95.60 102.40 -6.80 0.80 N 48 1 "O4'" D DA 13 ? ? "C1'" D DA 13 ? ? N9 D DA 13 ? ? 100.76 108.00 -7.24 0.70 N 49 1 C4 D DT 15 ? ? C5 D DT 15 ? ? C7 D DT 15 ? ? 123.54 119.00 4.54 0.60 N 50 1 C6 D DT 15 ? ? C5 D DT 15 ? ? C7 D DT 15 ? ? 119.13 122.90 -3.77 0.60 N 51 1 "O5'" D DC 16 ? ? "C5'" D DC 16 ? ? "C4'" D DC 16 ? ? 103.92 109.40 -5.48 0.80 N 52 1 "O4'" D DC 16 ? ? "C1'" D DC 16 ? ? N1 D DC 16 ? ? 110.46 108.30 2.16 0.30 N 53 1 "O4'" D DA 19 ? ? "C1'" D DA 19 ? ? N9 D DA 19 ? ? 99.38 108.00 -8.62 0.70 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 45 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 39.05 _pdbx_validate_torsion.psi 56.90 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -13.8540 10.8605 -12.0763 0.1004 0.0273 0.0845 -0.0105 0.0593 0.0127 2.3823 1.6616 4.7103 0.4486 0.8484 -0.2291 0.0233 -0.0606 0.0373 -0.2965 -0.0640 0.1801 0.2991 0.2318 -0.1802 'X-RAY DIFFRACTION' 2 ? refined -12.0307 10.8678 -33.0558 0.0573 0.0459 0.1380 -0.0029 -0.0120 -0.0165 2.5383 1.2752 2.3361 0.3429 -0.7772 0.1049 -0.0233 -0.0396 0.0629 0.3152 -0.1596 0.1075 -0.1292 0.0608 -0.1670 'X-RAY DIFFRACTION' 3 ? refined 3.7408 16.3602 -20.3907 0.0448 0.0978 0.0820 -0.0118 -0.0021 0.0293 1.5891 0.7339 5.1371 0.0198 -1.4070 0.7099 0.0370 0.0568 -0.0938 -0.1808 -0.0484 -0.0201 -0.0033 -0.1445 0.6331 'X-RAY DIFFRACTION' 4 ? refined 4.6467 14.5007 -22.8198 0.0193 0.0968 0.0514 0.0253 -0.0115 0.0196 1.5210 0.9501 4.9393 -0.1087 -1.4014 1.0523 0.0227 0.0514 -0.0741 -0.1784 -0.0621 -0.0414 0.0615 0.1319 0.5211 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 77 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 3 B 79 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 C 1 C 19 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 D 1 D 19 ? . . . . ? # _pdbx_phasing_MR.entry_id 3S8Q _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 41.760 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 41.760 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A HIS 78 ? A HIS 81 6 1 Y 1 A ASP 79 ? A ASP 82 7 1 Y 1 B GLY -2 ? B GLY 1 8 1 Y 1 B SER -1 ? B SER 2 9 1 Y 1 B HIS 0 ? B HIS 3 10 1 Y 1 B MET 1 ? B MET 4 11 1 Y 1 B GLU 2 ? B GLU 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 SER N N N N 402 SER CA C N S 403 SER C C N N 404 SER O O N N 405 SER CB C N N 406 SER OG O N N 407 SER OXT O N N 408 SER H H N N 409 SER H2 H N N 410 SER HA H N N 411 SER HB2 H N N 412 SER HB3 H N N 413 SER HG H N N 414 SER HXT H N N 415 THR N N N N 416 THR CA C N S 417 THR C C N N 418 THR O O N N 419 THR CB C N R 420 THR OG1 O N N 421 THR CG2 C N N 422 THR OXT O N N 423 THR H H N N 424 THR H2 H N N 425 THR HA H N N 426 THR HB H N N 427 THR HG1 H N N 428 THR HG21 H N N 429 THR HG22 H N N 430 THR HG23 H N N 431 THR HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 SER N CA sing N N 396 SER N H sing N N 397 SER N H2 sing N N 398 SER CA C sing N N 399 SER CA CB sing N N 400 SER CA HA sing N N 401 SER C O doub N N 402 SER C OXT sing N N 403 SER CB OG sing N N 404 SER CB HB2 sing N N 405 SER CB HB3 sing N N 406 SER OG HG sing N N 407 SER OXT HXT sing N N 408 THR N CA sing N N 409 THR N H sing N N 410 THR N H2 sing N N 411 THR CA C sing N N 412 THR CA CB sing N N 413 THR CA HA sing N N 414 THR C O doub N N 415 THR C OXT sing N N 416 THR CB OG1 sing N N 417 THR CB CG2 sing N N 418 THR CB HB sing N N 419 THR OG1 HG1 sing N N 420 THR CG2 HG21 sing N N 421 THR CG2 HG22 sing N N 422 THR CG2 HG23 sing N N 423 THR OXT HXT sing N N 424 TYR N CA sing N N 425 TYR N H sing N N 426 TYR N H2 sing N N 427 TYR CA C sing N N 428 TYR CA CB sing N N 429 TYR CA HA sing N N 430 TYR C O doub N N 431 TYR C OXT sing N N 432 TYR CB CG sing N N 433 TYR CB HB2 sing N N 434 TYR CB HB3 sing N N 435 TYR CG CD1 doub Y N 436 TYR CG CD2 sing Y N 437 TYR CD1 CE1 sing Y N 438 TYR CD1 HD1 sing N N 439 TYR CD2 CE2 doub Y N 440 TYR CD2 HD2 sing N N 441 TYR CE1 CZ doub Y N 442 TYR CE1 HE1 sing N N 443 TYR CE2 CZ sing Y N 444 TYR CE2 HE2 sing N N 445 TYR CZ OH sing N N 446 TYR OH HH sing N N 447 TYR OXT HXT sing N N 448 VAL N CA sing N N 449 VAL N H sing N N 450 VAL N H2 sing N N 451 VAL CA C sing N N 452 VAL CA CB sing N N 453 VAL CA HA sing N N 454 VAL C O doub N N 455 VAL C OXT sing N N 456 VAL CB CG1 sing N N 457 VAL CB CG2 sing N N 458 VAL CB HB sing N N 459 VAL CG1 HG11 sing N N 460 VAL CG1 HG12 sing N N 461 VAL CG1 HG13 sing N N 462 VAL CG2 HG21 sing N N 463 VAL CG2 HG22 sing N N 464 VAL CG2 HG23 sing N N 465 VAL OXT HXT sing N N 466 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3S8Q 'double helix' 3S8Q 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 2 1_555 D DA 19 1_555 -0.031 -0.101 0.078 3.563 -2.591 5.150 1 C_DT2:DA19_D C 2 ? D 19 ? 20 1 1 C DG 3 1_555 D DC 18 1_555 -0.533 -0.164 0.129 0.230 -6.049 1.749 2 C_DG3:DC18_D C 3 ? D 18 ? 19 1 1 C DT 4 1_555 D DA 17 1_555 0.002 -0.104 0.200 -3.939 -4.669 2.757 3 C_DT4:DA17_D C 4 ? D 17 ? 20 1 1 C DG 5 1_555 D DC 16 1_555 -0.260 -0.281 0.007 5.460 -2.986 -0.911 4 C_DG5:DC16_D C 5 ? D 16 ? 19 1 1 C DA 6 1_555 D DT 15 1_555 0.090 -0.134 0.083 11.101 -7.862 0.107 5 C_DA6:DT15_D C 6 ? D 15 ? 20 1 1 C DC 7 1_555 D DG 14 1_555 0.239 -0.127 0.180 7.569 -18.132 1.474 6 C_DC7:DG14_D C 7 ? D 14 ? 19 1 1 C DT 8 1_555 D DA 13 1_555 0.019 -0.088 0.097 4.737 -14.875 7.155 7 C_DT8:DA13_D C 8 ? D 13 ? 20 1 1 C DT 9 1_555 D DA 12 1_555 -0.139 -0.090 -0.098 7.691 -8.736 1.284 8 C_DT9:DA12_D C 9 ? D 12 ? 20 1 1 C DA 10 1_555 D DT 11 1_555 0.030 -0.071 -0.143 -5.229 -3.829 2.585 9 C_DA10:DT11_D C 10 ? D 11 ? 20 1 1 C DT 11 1_555 D DA 10 1_555 -0.037 0.024 -0.161 7.404 -2.203 6.133 10 C_DT11:DA10_D C 11 ? D 10 ? 20 1 1 C DA 12 1_555 D DT 9 1_555 0.118 -0.102 0.095 -9.185 -14.237 5.068 11 C_DA12:DT9_D C 12 ? D 9 ? 20 1 1 C DG 13 1_555 D DC 8 1_555 -0.271 -0.088 0.152 -7.148 -17.225 0.037 12 C_DG13:DC8_D C 13 ? D 8 ? 19 1 1 C DT 14 1_555 D DA 7 1_555 0.002 -0.190 0.245 -12.596 -7.360 3.065 13 C_DT14:DA7_D C 14 ? D 7 ? 20 1 1 C DC 15 1_555 D DG 6 1_555 0.421 -0.293 0.205 -7.746 -8.544 1.474 14 C_DC15:DG6_D C 15 ? D 6 ? 19 1 1 C DC 16 1_555 D DG 5 1_555 0.190 -0.098 0.325 -14.000 -3.560 0.909 15 C_DC16:DG5_D C 16 ? D 5 ? 19 1 1 C DG 17 1_555 D DC 4 1_555 -0.266 -0.024 -0.008 -15.027 -16.115 3.591 16 C_DG17:DC4_D C 17 ? D 4 ? 19 1 1 C DT 18 1_555 D DA 3 1_555 -0.023 -0.074 0.507 -12.670 -7.625 6.106 17 C_DT18:DA3_D C 18 ? D 3 ? 20 1 1 C DG 19 1_555 D DC 2 1_555 -0.455 -0.068 -0.274 -4.044 -8.489 1.959 18 C_DG19:DC2_D C 19 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 2 1_555 D DA 19 1_555 C DG 3 1_555 D DC 18 1_555 0.027 -1.184 3.316 -2.002 3.541 35.535 -2.436 -0.331 3.181 5.779 3.268 35.760 1 CC_DT2DG3:DC18DA19_DD C 2 ? D 19 ? C 3 ? D 18 ? 1 C DG 3 1_555 D DC 18 1_555 C DT 4 1_555 D DA 17 1_555 -0.598 -0.662 3.457 0.277 0.423 27.598 -1.496 1.324 3.441 0.886 -0.580 27.602 2 CC_DG3DT4:DA17DC18_DD C 3 ? D 18 ? C 4 ? D 17 ? 1 C DT 4 1_555 D DA 17 1_555 C DG 5 1_555 D DC 16 1_555 -0.327 0.871 3.179 1.078 0.524 39.945 1.216 0.599 3.180 0.767 -1.578 39.962 3 CC_DT4DG5:DC16DA17_DD C 4 ? D 17 ? C 5 ? D 16 ? 1 C DG 5 1_555 D DC 16 1_555 C DA 6 1_555 D DT 15 1_555 0.095 -0.317 3.176 -1.696 3.817 31.236 -1.271 -0.480 3.107 7.049 3.132 31.507 4 CC_DG5DA6:DT15DC16_DD C 5 ? D 16 ? C 6 ? D 15 ? 1 C DA 6 1_555 D DT 15 1_555 C DC 7 1_555 D DG 14 1_555 0.558 -0.897 3.396 -1.839 0.860 28.450 -2.022 -1.563 3.327 1.747 3.735 28.521 5 CC_DA6DC7:DG14DT15_DD C 6 ? D 15 ? C 7 ? D 14 ? 1 C DC 7 1_555 D DG 14 1_555 C DT 8 1_555 D DA 13 1_555 -0.530 -0.130 3.310 3.911 11.007 34.712 -1.724 1.384 3.054 17.834 -6.336 36.568 6 CC_DC7DT8:DA13DG14_DD C 7 ? D 14 ? C 8 ? D 13 ? 1 C DT 8 1_555 D DA 13 1_555 C DT 9 1_555 D DA 12 1_555 -0.027 -0.198 3.147 0.370 -2.841 38.672 0.037 0.084 3.153 -4.283 -0.558 38.774 7 CC_DT8DT9:DA12DA13_DD C 8 ? D 13 ? C 9 ? D 12 ? 1 C DT 9 1_555 D DA 12 1_555 C DA 10 1_555 D DT 11 1_555 0.600 0.163 3.614 2.400 -3.244 43.961 0.554 -0.549 3.620 -4.323 -3.198 44.137 8 CC_DT9DA10:DT11DA12_DD C 9 ? D 12 ? C 10 ? D 11 ? 1 C DA 10 1_555 D DT 11 1_555 C DT 11 1_555 D DA 10 1_555 -0.055 -0.541 3.056 0.514 -4.517 27.644 -0.105 0.228 3.101 -9.373 -1.066 28.008 9 CC_DA10DT11:DA10DT11_DD C 10 ? D 11 ? C 11 ? D 10 ? 1 C DT 11 1_555 D DA 10 1_555 C DA 12 1_555 D DT 9 1_555 -0.380 0.829 3.753 -2.397 -8.909 48.868 1.726 0.253 3.573 -10.658 2.868 49.679 10 CC_DT11DA12:DT9DA10_DD C 11 ? D 10 ? C 12 ? D 9 ? 1 C DA 12 1_555 D DT 9 1_555 C DG 13 1_555 D DC 8 1_555 0.468 -0.391 3.237 -2.729 6.354 30.980 -1.850 -1.344 3.047 11.713 5.030 31.724 11 CC_DA12DG13:DC8DT9_DD C 12 ? D 9 ? C 13 ? D 8 ? 1 C DG 13 1_555 D DC 8 1_555 C DT 14 1_555 D DA 7 1_555 -0.511 -0.752 3.448 -0.181 -5.078 37.156 -0.459 0.769 3.519 -7.923 0.282 37.490 12 CC_DG13DT14:DA7DC8_DD C 13 ? D 8 ? C 14 ? D 7 ? 1 C DT 14 1_555 D DA 7 1_555 C DC 15 1_555 D DG 6 1_555 -0.189 -0.563 3.134 -0.123 -0.372 31.784 -0.963 0.324 3.141 -0.679 0.224 31.787 13 CC_DT14DC15:DG6DA7_DD C 14 ? D 7 ? C 15 ? D 6 ? 1 C DC 15 1_555 D DG 6 1_555 C DC 16 1_555 D DG 5 1_555 0.553 -0.471 3.416 -0.869 3.027 38.182 -1.111 -0.956 3.358 4.618 1.326 38.307 14 CC_DC15DC16:DG5DG6_DD C 15 ? D 6 ? C 16 ? D 5 ? 1 C DC 16 1_555 D DG 5 1_555 C DG 17 1_555 D DC 4 1_555 0.854 -1.469 3.142 5.733 12.591 22.423 -6.205 -0.521 2.175 29.089 -13.245 26.301 15 CC_DC16DG17:DC4DG5_DD C 16 ? D 5 ? C 17 ? D 4 ? 1 C DG 17 1_555 D DC 4 1_555 C DT 18 1_555 D DA 3 1_555 -0.504 -0.955 3.248 -1.535 4.187 31.096 -2.532 0.650 3.117 7.760 2.846 31.406 16 CC_DG17DT18:DA3DC4_DD C 17 ? D 4 ? C 18 ? D 3 ? 1 C DT 18 1_555 D DA 3 1_555 C DG 19 1_555 D DC 2 1_555 -0.057 0.518 3.220 7.344 5.963 38.575 0.070 0.938 3.199 8.865 -10.918 39.675 17 CC_DT18DG19:DC2DA3_DD C 18 ? D 3 ? C 19 ? D 2 ? # _atom_sites.entry_id 3S8Q _atom_sites.fract_transf_matrix[1][1] 0.022565 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016248 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008796 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_