HEADER LYASE 02-JUN-11 3SAE TITLE STRUCTURE OF A THREE-DOMAIN SESQUITERPENE SYNTHASE: A PROSPECTIVE TITLE 2 TARGET FOR ADVANCED BIOFUELS PRODUCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-BISABOLENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: (E)-ALPHA-BISABOLENE SYNTHASE, AGFEABIS; COMPND 5 EC: 4.2.3.38; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ABIES GRANDIS; SOURCE 3 ORGANISM_COMMON: GRAND FIR,LOWLAND FIR,LOWLAND WHITE FIR,SILVER FIR, SOURCE 4 WHITE FIR,YELLOW FIR; SOURCE 5 ORGANISM_TAXID: 46611; SOURCE 6 GENE: AG1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSKB3 KEYWDS LYASE, TERPENE SYNTHASE EXPDTA X-RAY DIFFRACTION AUTHOR R.P.MCANDREW,P.P.PERALTA-YAHYA,A.DEGIOVANNI,J.H.PEREIRA,M.Z.HADI, AUTHOR 2 J.D.KEASLING,P.D.ADAMS REVDAT 3 28-FEB-24 3SAE 1 REMARK LINK REVDAT 2 28-MAR-12 3SAE 1 JRNL REVDAT 1 14-DEC-11 3SAE 0 JRNL AUTH R.P.MCANDREW,P.P.PERALTA-YAHYA,A.DEGIOVANNI,J.H.PEREIRA, JRNL AUTH 2 M.Z.HADI,J.D.KEASLING,P.D.ADAMS JRNL TITL STRUCTURE OF A THREE-DOMAIN SESQUITERPENE SYNTHASE: A JRNL TITL 2 PROSPECTIVE TARGET FOR ADVANCED BIOFUELS PRODUCTION. JRNL REF STRUCTURE V. 19 1876 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 22153510 JRNL DOI 10.1016/J.STR.2011.09.013 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_764) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 67100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2803 - 4.7172 1.00 4859 142 0.1626 0.1773 REMARK 3 2 4.7172 - 3.7446 1.00 4739 137 0.1318 0.1594 REMARK 3 3 3.7446 - 3.2714 1.00 4704 136 0.1551 0.2012 REMARK 3 4 3.2714 - 2.9723 1.00 4722 138 0.1711 0.2030 REMARK 3 5 2.9723 - 2.7593 1.00 4639 135 0.1625 0.2144 REMARK 3 6 2.7593 - 2.5967 1.00 4695 136 0.1532 0.2012 REMARK 3 7 2.5967 - 2.4666 1.00 4670 135 0.1572 0.2115 REMARK 3 8 2.4666 - 2.3592 1.00 4662 136 0.1532 0.2419 REMARK 3 9 2.3592 - 2.2684 1.00 4675 135 0.1615 0.2031 REMARK 3 10 2.2684 - 2.1901 1.00 4647 136 0.1579 0.2592 REMARK 3 11 2.1901 - 2.1217 1.00 4635 133 0.1711 0.2291 REMARK 3 12 2.1217 - 2.0610 1.00 4690 137 0.1791 0.2499 REMARK 3 13 2.0610 - 2.0068 0.99 4585 132 0.2083 0.2739 REMARK 3 14 2.0068 - 1.9578 0.93 4284 126 0.2506 0.2993 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 40.70 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.55950 REMARK 3 B22 (A**2) : 7.77660 REMARK 3 B33 (A**2) : -4.21710 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.67160 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6576 REMARK 3 ANGLE : 0.945 8939 REMARK 3 CHIRALITY : 0.065 976 REMARK 3 PLANARITY : 0.004 1132 REMARK 3 DIHEDRAL : 12.853 2466 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 36:73) REMARK 3 ORIGIN FOR THE GROUP (A): 96.1107 26.3640 10.6287 REMARK 3 T TENSOR REMARK 3 T11: 0.2009 T22: 0.1391 REMARK 3 T33: 0.1447 T12: -0.0207 REMARK 3 T13: 0.0354 T23: -0.0442 REMARK 3 L TENSOR REMARK 3 L11: 5.9022 L22: 1.2704 REMARK 3 L33: 3.3443 L12: 0.4208 REMARK 3 L13: 3.6495 L23: -0.2552 REMARK 3 S TENSOR REMARK 3 S11: -0.0630 S12: 0.4669 S13: -0.1091 REMARK 3 S21: -0.1090 S22: 0.0620 S23: -0.1806 REMARK 3 S31: -0.0920 S32: 0.4050 S33: -0.0082 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 74:195) REMARK 3 ORIGIN FOR THE GROUP (A): 57.6551 4.7657 9.3369 REMARK 3 T TENSOR REMARK 3 T11: 0.2242 T22: 0.0697 REMARK 3 T33: 0.1483 T12: -0.0521 REMARK 3 T13: 0.0033 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 2.0827 L22: 1.3519 REMARK 3 L33: 1.5409 L12: -0.3079 REMARK 3 L13: 0.2273 L23: -0.0348 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.1685 S13: -0.2624 REMARK 3 S21: -0.1139 S22: 0.0112 S23: 0.0260 REMARK 3 S31: 0.3502 S32: -0.1188 S33: -0.0195 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 196:223) REMARK 3 ORIGIN FOR THE GROUP (A): 50.9055 4.0452 26.8899 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.2420 REMARK 3 T33: 0.1895 T12: -0.0968 REMARK 3 T13: 0.0140 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 3.3799 L22: 5.0586 REMARK 3 L33: 1.8609 L12: -3.9289 REMARK 3 L13: -1.4803 L23: 0.9948 REMARK 3 S TENSOR REMARK 3 S11: -0.2056 S12: -0.4742 S13: -0.1929 REMARK 3 S21: 0.2336 S22: 0.2653 S23: 0.1707 REMARK 3 S31: 0.1184 S32: 0.1510 S33: -0.0658 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 224:293) REMARK 3 ORIGIN FOR THE GROUP (A): 50.4555 20.7834 13.8827 REMARK 3 T TENSOR REMARK 3 T11: 0.1200 T22: 0.0854 REMARK 3 T33: 0.1199 T12: -0.0215 REMARK 3 T13: -0.0129 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 3.8919 L22: 1.0393 REMARK 3 L33: 3.5040 L12: 0.0218 REMARK 3 L13: -1.0453 L23: -0.1722 REMARK 3 S TENSOR REMARK 3 S11: 0.0440 S12: -0.0193 S13: 0.0854 REMARK 3 S21: -0.0170 S22: -0.0332 S23: 0.1303 REMARK 3 S31: 0.0537 S32: -0.3385 S33: -0.0112 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 294:382) REMARK 3 ORIGIN FOR THE GROUP (A): 71.3103 31.2310 22.7544 REMARK 3 T TENSOR REMARK 3 T11: 0.1371 T22: 0.0981 REMARK 3 T33: 0.1569 T12: 0.0128 REMARK 3 T13: 0.0044 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 2.9229 L22: 1.4735 REMARK 3 L33: 1.6933 L12: 0.0119 REMARK 3 L13: 0.0244 L23: 0.7831 REMARK 3 S TENSOR REMARK 3 S11: -0.0588 S12: -0.3012 S13: 0.3014 REMARK 3 S21: 0.0341 S22: -0.0328 S23: 0.2125 REMARK 3 S31: -0.0520 S32: -0.1572 S33: 0.0678 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 383:445) REMARK 3 ORIGIN FOR THE GROUP (A): 72.9969 17.5311 33.3598 REMARK 3 T TENSOR REMARK 3 T11: 0.1919 T22: 0.2090 REMARK 3 T33: 0.1336 T12: -0.0439 REMARK 3 T13: 0.0128 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.3842 L22: 5.8256 REMARK 3 L33: 1.8366 L12: 0.6675 REMARK 3 L13: 0.1755 L23: 1.9631 REMARK 3 S TENSOR REMARK 3 S11: 0.1427 S12: -0.3741 S13: 0.0176 REMARK 3 S21: 0.5914 S22: -0.2277 S23: 0.1687 REMARK 3 S31: 0.3000 S32: -0.0636 S33: 0.0899 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 446:580) REMARK 3 ORIGIN FOR THE GROUP (A): 99.3402 27.3776 28.1488 REMARK 3 T TENSOR REMARK 3 T11: 0.1141 T22: 0.1893 REMARK 3 T33: 0.1219 T12: -0.0143 REMARK 3 T13: 0.0127 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.4002 L22: 0.5225 REMARK 3 L33: 0.3059 L12: 0.5141 REMARK 3 L13: 0.2975 L23: 0.1044 REMARK 3 S TENSOR REMARK 3 S11: 0.0847 S12: -0.3267 S13: -0.1273 REMARK 3 S21: 0.0466 S22: -0.1006 S23: -0.0802 REMARK 3 S31: 0.0700 S32: 0.0758 S33: -0.0062 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 581:702) REMARK 3 ORIGIN FOR THE GROUP (A): 106.7796 46.2122 41.3949 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.4042 REMARK 3 T33: 0.1593 T12: -0.0801 REMARK 3 T13: 0.0127 T23: -0.1140 REMARK 3 L TENSOR REMARK 3 L11: 1.1529 L22: 0.0657 REMARK 3 L33: 0.7382 L12: -0.1633 REMARK 3 L13: -0.0933 L23: -0.0621 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.5513 S13: 0.2427 REMARK 3 S21: 0.1339 S22: -0.0119 S23: -0.0303 REMARK 3 S31: -0.1808 S32: 0.1481 S33: 0.0305 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 703:770) REMARK 3 ORIGIN FOR THE GROUP (A): 91.3877 32.6872 50.7109 REMARK 3 T TENSOR REMARK 3 T11: 0.0724 T22: 0.4357 REMARK 3 T33: 0.1145 T12: -0.0890 REMARK 3 T13: 0.1072 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.5399 L22: 0.8490 REMARK 3 L33: 3.1698 L12: 0.4215 REMARK 3 L13: -1.3419 L23: -0.3692 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: -0.6644 S13: -0.2863 REMARK 3 S21: 0.2443 S22: -0.1404 S23: -0.0666 REMARK 3 S31: 0.3264 S32: 0.2331 S33: 0.1775 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 771:817) REMARK 3 ORIGIN FOR THE GROUP (A): 96.5390 26.1812 33.3119 REMARK 3 T TENSOR REMARK 3 T11: 0.1156 T22: 0.2571 REMARK 3 T33: 0.1979 T12: -0.0498 REMARK 3 T13: -0.0046 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 3.1214 L22: 3.7870 REMARK 3 L33: 2.8219 L12: -1.0509 REMARK 3 L13: -0.7725 L23: 1.6275 REMARK 3 S TENSOR REMARK 3 S11: -0.0963 S12: -0.6074 S13: -0.4740 REMARK 3 S21: 0.5553 S22: -0.0316 S23: 0.1026 REMARK 3 S31: 0.4432 S32: 0.1127 S33: 0.0642 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SAE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000065962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91760 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67109 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MRSAD REMARK 200 SOFTWARE USED: AUTO-RICKSHAW, PHASER, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.5, 100 MM NACL, AND REMARK 280 23% (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 78.04550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.42150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 78.04550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.42150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 VAL A 4 REMARK 465 SER A 5 REMARK 465 ALA A 6 REMARK 465 VAL A 7 REMARK 465 SER A 8 REMARK 465 LYS A 9 REMARK 465 VAL A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 LEU A 13 REMARK 465 VAL A 14 REMARK 465 CYS A 15 REMARK 465 ASP A 16 REMARK 465 LEU A 17 REMARK 465 SER A 18 REMARK 465 SER A 19 REMARK 465 THR A 20 REMARK 465 SER A 21 REMARK 465 GLY A 22 REMARK 465 LEU A 23 REMARK 465 ILE A 24 REMARK 465 ARG A 25 REMARK 465 ARG A 26 REMARK 465 THR A 27 REMARK 465 ALA A 28 REMARK 465 ASN A 29 REMARK 465 PRO A 30 REMARK 465 HIS A 31 REMARK 465 PRO A 32 REMARK 465 ASN A 33 REMARK 465 VAL A 34 REMARK 465 ASN A 377 REMARK 465 GLY A 378 REMARK 465 LYS A 379 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 173 -175.67 74.48 REMARK 500 ILE A 381 -106.40 -122.45 REMARK 500 ALA A 477 -129.27 -141.02 REMARK 500 THR A 571 -63.56 -141.57 REMARK 500 LEU A 626 -8.45 -141.68 REMARK 500 TYR A 695 89.94 -169.43 REMARK 500 SER A 729 -169.75 -102.84 REMARK 500 ASP A 769 -174.59 -170.32 REMARK 500 ASP A 792 63.77 62.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 FPS A 822 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 819 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 566 OD2 REMARK 620 2 ASP A 570 OD2 100.5 REMARK 620 3 FPS A 822 O1A 92.2 88.1 REMARK 620 4 HOH A 999 O 82.5 176.8 93.0 REMARK 620 5 HOH A1107 O 165.5 94.0 88.0 83.0 REMARK 620 6 HOH A1559 O 99.7 100.7 163.6 77.5 77.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 821 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 566 OD1 REMARK 620 2 ASP A 570 OD2 87.5 REMARK 620 3 FPS A 822 O1A 92.6 85.8 REMARK 620 4 HOH A 899 O 91.5 170.2 84.5 REMARK 620 5 HOH A 984 O 178.2 92.7 89.2 88.5 REMARK 620 6 HOH A1560 O 80.9 101.0 170.3 88.4 97.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 820 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 713 OD1 REMARK 620 2 THR A 717 OG1 87.4 REMARK 620 3 GLU A 721 OE1 177.6 93.2 REMARK 620 4 HOH A 885 O 85.2 87.4 92.6 REMARK 620 5 HOH A1405 O 88.4 169.0 90.6 82.1 REMARK 620 6 HOH A1564 O 91.6 97.5 90.6 174.0 92.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 818 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 819 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 820 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 821 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FPS A 822 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 823 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SDQ RELATED DB: PDB REMARK 900 RELATED ID: 3SDR RELATED DB: PDB REMARK 900 RELATED ID: 3SDT RELATED DB: PDB REMARK 900 RELATED ID: 3SDU RELATED DB: PDB REMARK 900 RELATED ID: 3SDV RELATED DB: PDB DBREF 3SAE A 1 817 UNP O81086 TPSD1_ABIGR 1 817 SEQRES 1 A 817 MET ALA GLY VAL SER ALA VAL SER LYS VAL SER SER LEU SEQRES 2 A 817 VAL CYS ASP LEU SER SER THR SER GLY LEU ILE ARG ARG SEQRES 3 A 817 THR ALA ASN PRO HIS PRO ASN VAL TRP GLY TYR ASP LEU SEQRES 4 A 817 VAL HIS SER LEU LYS SER PRO TYR ILE ASP SER SER TYR SEQRES 5 A 817 ARG GLU ARG ALA GLU VAL LEU VAL SER GLU ILE LYS ALA SEQRES 6 A 817 MET LEU ASN PRO ALA ILE THR GLY ASP GLY GLU SER MET SEQRES 7 A 817 ILE THR PRO SER ALA TYR ASP THR ALA TRP VAL ALA ARG SEQRES 8 A 817 VAL PRO ALA ILE ASP GLY SER ALA ARG PRO GLN PHE PRO SEQRES 9 A 817 GLN THR VAL ASP TRP ILE LEU LYS ASN GLN LEU LYS ASP SEQRES 10 A 817 GLY SER TRP GLY ILE GLN SER HIS PHE LEU LEU SER ASP SEQRES 11 A 817 ARG LEU LEU ALA THR LEU SER CYS VAL LEU VAL LEU LEU SEQRES 12 A 817 LYS TRP ASN VAL GLY ASP LEU GLN VAL GLU GLN GLY ILE SEQRES 13 A 817 GLU PHE ILE LYS SER ASN LEU GLU LEU VAL LYS ASP GLU SEQRES 14 A 817 THR ASP GLN ASP SER LEU VAL THR ASP PHE GLU ILE ILE SEQRES 15 A 817 PHE PRO SER LEU LEU ARG GLU ALA GLN SER LEU ARG LEU SEQRES 16 A 817 GLY LEU PRO TYR ASP LEU PRO TYR ILE HIS LEU LEU GLN SEQRES 17 A 817 THR LYS ARG GLN GLU ARG LEU ALA LYS LEU SER ARG GLU SEQRES 18 A 817 GLU ILE TYR ALA VAL PRO SER PRO LEU LEU TYR SER LEU SEQRES 19 A 817 GLU GLY ILE GLN ASP ILE VAL GLU TRP GLU ARG ILE MET SEQRES 20 A 817 GLU VAL GLN SER GLN ASP GLY SER PHE LEU SER SER PRO SEQRES 21 A 817 ALA SER THR ALA CYS VAL PHE MET HIS THR GLY ASP ALA SEQRES 22 A 817 LYS CYS LEU GLU PHE LEU ASN SER VAL MET ILE LYS PHE SEQRES 23 A 817 GLY ASN PHE VAL PRO CYS LEU TYR PRO VAL ASP LEU LEU SEQRES 24 A 817 GLU ARG LEU LEU ILE VAL ASP ASN ILE VAL ARG LEU GLY SEQRES 25 A 817 ILE TYR ARG HIS PHE GLU LYS GLU ILE LYS GLU ALA LEU SEQRES 26 A 817 ASP TYR VAL TYR ARG HIS TRP ASN GLU ARG GLY ILE GLY SEQRES 27 A 817 TRP GLY ARG LEU ASN PRO ILE ALA ASP LEU GLU THR THR SEQRES 28 A 817 ALA LEU GLY PHE ARG LEU LEU ARG LEU HIS ARG TYR ASN SEQRES 29 A 817 VAL SER PRO ALA ILE PHE ASP ASN PHE LYS ASP ALA ASN SEQRES 30 A 817 GLY LYS PHE ILE CYS SER THR GLY GLN PHE ASN LYS ASP SEQRES 31 A 817 VAL ALA SER MET LEU ASN LEU TYR ARG ALA SER GLN LEU SEQRES 32 A 817 ALA PHE PRO GLY GLU ASN ILE LEU ASP GLU ALA LYS SER SEQRES 33 A 817 PHE ALA THR LYS TYR LEU ARG GLU ALA LEU GLU LYS SER SEQRES 34 A 817 GLU THR SER SER ALA TRP ASN ASN LYS GLN ASN LEU SER SEQRES 35 A 817 GLN GLU ILE LYS TYR ALA LEU LYS THR SER TRP HIS ALA SEQRES 36 A 817 SER VAL PRO ARG VAL GLU ALA LYS ARG TYR CYS GLN VAL SEQRES 37 A 817 TYR ARG PRO ASP TYR ALA ARG ILE ALA LYS CYS VAL TYR SEQRES 38 A 817 LYS LEU PRO TYR VAL ASN ASN GLU LYS PHE LEU GLU LEU SEQRES 39 A 817 GLY LYS LEU ASP PHE ASN ILE ILE GLN SER ILE HIS GLN SEQRES 40 A 817 GLU GLU MET LYS ASN VAL THR SER TRP PHE ARG ASP SER SEQRES 41 A 817 GLY LEU PRO LEU PHE THR PHE ALA ARG GLU ARG PRO LEU SEQRES 42 A 817 GLU PHE TYR PHE LEU VAL ALA ALA GLY THR TYR GLU PRO SEQRES 43 A 817 GLN TYR ALA LYS CYS ARG PHE LEU PHE THR LYS VAL ALA SEQRES 44 A 817 CYS LEU GLN THR VAL LEU ASP ASP MET TYR ASP THR TYR SEQRES 45 A 817 GLY THR LEU ASP GLU LEU LYS LEU PHE THR GLU ALA VAL SEQRES 46 A 817 ARG ARG TRP ASP LEU SER PHE THR GLU ASN LEU PRO ASP SEQRES 47 A 817 TYR MET LYS LEU CYS TYR GLN ILE TYR TYR ASP ILE VAL SEQRES 48 A 817 HIS GLU VAL ALA TRP GLU ALA GLU LYS GLU GLN GLY ARG SEQRES 49 A 817 GLU LEU VAL SER PHE PHE ARG LYS GLY TRP GLU ASP TYR SEQRES 50 A 817 LEU LEU GLY TYR TYR GLU GLU ALA GLU TRP LEU ALA ALA SEQRES 51 A 817 GLU TYR VAL PRO THR LEU ASP GLU TYR ILE LYS ASN GLY SEQRES 52 A 817 ILE THR SER ILE GLY GLN ARG ILE LEU LEU LEU SER GLY SEQRES 53 A 817 VAL LEU ILE MET ASP GLY GLN LEU LEU SER GLN GLU ALA SEQRES 54 A 817 LEU GLU LYS VAL ASP TYR PRO GLY ARG ARG VAL LEU THR SEQRES 55 A 817 GLU LEU ASN SER LEU ILE SER ARG LEU ALA ASP ASP THR SEQRES 56 A 817 LYS THR TYR LYS ALA GLU LYS ALA ARG GLY GLU LEU ALA SEQRES 57 A 817 SER SER ILE GLU CYS TYR MET LYS ASP HIS PRO GLU CYS SEQRES 58 A 817 THR GLU GLU GLU ALA LEU ASP HIS ILE TYR SER ILE LEU SEQRES 59 A 817 GLU PRO ALA VAL LYS GLU LEU THR ARG GLU PHE LEU LYS SEQRES 60 A 817 PRO ASP ASP VAL PRO PHE ALA CYS LYS LYS MET LEU PHE SEQRES 61 A 817 GLU GLU THR ARG VAL THR MET VAL ILE PHE LYS ASP GLY SEQRES 62 A 817 ASP GLY PHE GLY VAL SER LYS LEU GLU VAL LYS ASP HIS SEQRES 63 A 817 ILE LYS GLU CYS LEU ILE GLU PRO LEU PRO LEU HET CL A 818 1 HET MG A 819 1 HET MG A 820 1 HET MG A 821 1 HET FPS A 822 20 HET GOL A 823 6 HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM FPS S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] HETNAM 2 FPS TRIHYDROGEN THIODIPHOSPHATE HETNAM GOL GLYCEROL HETSYN FPS FARNESYL THIOPYROPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL CL 1- FORMUL 3 MG 3(MG 2+) FORMUL 6 FPS C15 H28 O6 P2 S FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *766(H2 O) HELIX 1 1 TRP A 35 SER A 42 1 8 HELIX 2 2 SER A 45 ILE A 48 5 4 HELIX 3 3 ASP A 49 THR A 72 1 24 HELIX 4 4 SER A 82 VAL A 92 1 11 HELIX 5 5 PHE A 103 ASN A 113 1 11 HELIX 6 6 LEU A 127 TRP A 145 1 19 HELIX 7 7 GLY A 148 VAL A 166 1 19 HELIX 8 8 ASP A 168 GLN A 172 5 5 HELIX 9 9 ASP A 178 LEU A 193 1 16 HELIX 10 10 LEU A 201 LYS A 217 1 17 HELIX 11 11 SER A 219 TYR A 224 1 6 HELIX 12 12 SER A 228 ILE A 237 5 10 HELIX 13 13 ARG A 245 GLN A 250 5 6 HELIX 14 14 SER A 259 GLY A 271 1 13 HELIX 15 15 ASP A 272 GLY A 287 1 16 HELIX 16 16 VAL A 296 LEU A 311 1 16 HELIX 17 17 ILE A 313 HIS A 316 5 4 HELIX 18 18 PHE A 317 TRP A 332 1 16 HELIX 19 19 ASP A 347 HIS A 361 1 15 HELIX 20 20 SER A 366 LYS A 374 5 9 HELIX 21 21 GLN A 386 GLN A 402 1 17 HELIX 22 22 GLU A 408 LYS A 428 1 21 HELIX 23 23 SER A 429 SER A 432 5 4 HELIX 24 24 SER A 433 GLN A 439 1 7 HELIX 25 25 ASN A 440 THR A 451 1 12 HELIX 26 26 VAL A 457 GLN A 467 1 11 HELIX 27 27 ASN A 488 SER A 520 1 33 HELIX 28 28 GLY A 521 PHE A 525 5 5 HELIX 29 29 ARG A 531 ALA A 541 1 11 HELIX 30 30 GLU A 545 GLN A 547 5 3 HELIX 31 31 TYR A 548 THR A 571 1 24 HELIX 32 32 THR A 574 TRP A 588 1 15 HELIX 33 33 ASP A 589 LEU A 596 5 8 HELIX 34 34 PRO A 597 GLY A 623 1 27 HELIX 35 35 LEU A 626 GLU A 651 1 26 HELIX 36 36 THR A 655 ILE A 667 1 13 HELIX 37 37 GLY A 668 LEU A 678 1 11 HELIX 38 38 SER A 686 ASP A 694 1 9 HELIX 39 39 VAL A 700 GLY A 725 1 26 HELIX 40 40 SER A 729 HIS A 738 1 10 HELIX 41 41 THR A 742 LYS A 767 1 26 HELIX 42 42 PRO A 772 PHE A 790 1 19 HELIX 43 43 SER A 799 ILE A 812 1 14 SHEET 1 A 2 ARG A 475 ILE A 476 0 SHEET 2 A 2 VAL A 480 TYR A 481 -1 O TYR A 481 N ARG A 475 LINK OD2 ASP A 566 MG MG A 819 1555 1555 2.15 LINK OD1 ASP A 566 MG MG A 821 1555 1555 2.08 LINK OD2 ASP A 570 MG MG A 819 1555 1555 2.10 LINK OD2 ASP A 570 MG MG A 821 1555 1555 2.10 LINK OD1 ASP A 713 MG MG A 820 1555 1555 2.07 LINK OG1 THR A 717 MG MG A 820 1555 1555 2.14 LINK OE1 GLU A 721 MG MG A 820 1555 1555 2.02 LINK MG MG A 819 O1A FPS A 822 1555 1555 2.05 LINK MG MG A 819 O HOH A 999 1555 1555 2.10 LINK MG MG A 819 O HOH A1107 1555 1555 2.10 LINK MG MG A 819 O HOH A1559 1555 1555 2.05 LINK MG MG A 820 O HOH A 885 1555 1555 2.09 LINK MG MG A 820 O HOH A1405 1555 1555 2.10 LINK MG MG A 820 O HOH A1564 1555 1555 2.08 LINK MG MG A 821 O1A FPS A 822 1555 1555 2.13 LINK MG MG A 821 O HOH A 899 1555 1555 2.10 LINK MG MG A 821 O HOH A 984 1555 1555 2.09 LINK MG MG A 821 O HOH A1560 1555 1555 2.06 CISPEP 1 TYR A 294 PRO A 295 0 -6.39 SITE 1 AC1 4 HIS A 125 GLN A 439 ARG A 470 HOH A 959 SITE 1 AC2 7 ASP A 566 ASP A 570 MG A 821 FPS A 822 SITE 2 AC2 7 HOH A 999 HOH A1107 HOH A1559 SITE 1 AC3 6 ASP A 713 THR A 717 GLU A 721 HOH A 885 SITE 2 AC3 6 HOH A1405 HOH A1564 SITE 1 AC4 7 ASP A 566 ASP A 570 MG A 819 FPS A 822 SITE 2 AC4 7 HOH A 899 HOH A 984 HOH A1560 SITE 1 AC5 17 PHE A 535 GLN A 562 ASP A 566 ASP A 570 SITE 2 AC5 17 ILE A 667 GLY A 668 GLN A 669 ARG A 710 SITE 3 AC5 17 ASP A 713 MG A 819 MG A 821 HOH A 899 SITE 4 AC5 17 HOH A 984 HOH A 999 HOH A1107 HOH A1405 SITE 5 AC5 17 HOH A1563 SITE 1 AC6 8 GLU A 349 ALA A 392 ARG A 475 ILE A 476 SITE 2 AC6 8 HOH A 987 HOH A1050 HOH A1315 HOH A1325 CRYST1 156.091 54.843 126.319 90.00 119.34 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006407 0.000000 0.003601 0.00000 SCALE2 0.000000 0.018234 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009081 0.00000