data_3SEM # _entry.id 3SEM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SEM pdb_00003sem 10.2210/pdb3sem/pdb RCSB RCSB000016 ? ? WWPDB D_1000000016 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-01-06 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-09-13 5 'Structure model' 1 4 2023-11-15 6 'Structure model' 1 5 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Derived calculations' 11 4 'Structure model' 'Refinement description' 12 5 'Structure model' 'Data collection' 13 5 'Structure model' 'Derived calculations' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' struct_conn 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_chem_comp_atom.atom_id' 5 5 'Structure model' '_chem_comp_bond.atom_id_2' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3SEM _pdbx_database_status.recvd_initial_deposition_date 1998-11-02 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nguyen, J.T.' 1 'Turck, C.W.' 2 'Cohen, F.E.' 3 'Zuckermann, R.N.' 4 'Lim, W.A.' 5 # _citation.id primary _citation.title 'Exploiting the basis of proline recognition by SH3 and WW domains: design of N-substituted inhibitors.' _citation.journal_abbrev Science _citation.journal_volume 282 _citation.page_first 2088 _citation.page_last 2092 _citation.year 1998 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher 'American Association for the Advancement of Science Washington, D.C.' _citation.pdbx_database_id_PubMed 9851931 _citation.pdbx_database_id_DOI 10.1126/science.282.5396.2088 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nguyen, J.T.' 1 ? primary 'Turck, C.W.' 2 ? primary 'Cohen, F.E.' 3 ? primary 'Zuckermann, R.N.' 4 ? primary 'Lim, W.A.' 5 ? # _citation_editor.citation_id primary _citation_editor.name 'Bloom, F.E.' _citation_editor.ordinal 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SEX MUSCLE ABNORMAL PROTEIN 5' 7000.690 2 ? ? 'C-TERMINAL SH3' ? 2 polymer syn 'SH3 PEPTOID INHIBITOR' 1088.328 2 ? ? ? ? 3 water nat water 18.015 28 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYNSN ETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYNSN A,B ? 2 'polypeptide(L)' no yes 'PPPV(NMC)PRRR' PPPVGPRRR C,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 LYS n 1 4 PHE n 1 5 VAL n 1 6 GLN n 1 7 ALA n 1 8 LEU n 1 9 PHE n 1 10 ASP n 1 11 PHE n 1 12 ASN n 1 13 PRO n 1 14 GLN n 1 15 GLU n 1 16 SER n 1 17 GLY n 1 18 GLU n 1 19 LEU n 1 20 ALA n 1 21 PHE n 1 22 LYS n 1 23 ARG n 1 24 GLY n 1 25 ASP n 1 26 VAL n 1 27 ILE n 1 28 THR n 1 29 LEU n 1 30 ILE n 1 31 ASN n 1 32 LYS n 1 33 ASP n 1 34 ASP n 1 35 PRO n 1 36 ASN n 1 37 TRP n 1 38 TRP n 1 39 GLU n 1 40 GLY n 1 41 GLN n 1 42 LEU n 1 43 ASN n 1 44 ASN n 1 45 ARG n 1 46 ARG n 1 47 GLY n 1 48 ILE n 1 49 PHE n 1 50 PRO n 1 51 SER n 1 52 ASN n 1 53 TYR n 1 54 VAL n 1 55 CYS n 1 56 PRO n 1 57 TYR n 1 58 ASN n 1 59 SER n 1 60 ASN n 2 1 PRO n 2 2 PRO n 2 3 PRO n 2 4 VAL n 2 5 NMC n 2 6 PRO n 2 7 ARG n 2 8 ARG n 2 9 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Caenorhabditis _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NMC 'L-peptide linking' n 'N-CYCLOPROPYLMETHYL GLYCINE' ? 'C6 H11 N O2' 129.157 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 155 155 GLU GLU A . n A 1 2 THR 2 156 156 THR THR A . n A 1 3 LYS 3 157 157 LYS LYS A . n A 1 4 PHE 4 158 158 PHE PHE A . n A 1 5 VAL 5 159 159 VAL VAL A . n A 1 6 GLN 6 160 160 GLN GLN A . n A 1 7 ALA 7 161 161 ALA ALA A . n A 1 8 LEU 8 162 162 LEU LEU A . n A 1 9 PHE 9 163 163 PHE PHE A . n A 1 10 ASP 10 164 164 ASP ASP A . n A 1 11 PHE 11 165 165 PHE PHE A . n A 1 12 ASN 12 166 166 ASN ASN A . n A 1 13 PRO 13 167 167 PRO PRO A . n A 1 14 GLN 14 168 168 GLN GLN A . n A 1 15 GLU 15 169 169 GLU GLU A . n A 1 16 SER 16 170 170 SER SER A . n A 1 17 GLY 17 171 171 GLY GLY A . n A 1 18 GLU 18 172 172 GLU GLU A . n A 1 19 LEU 19 173 173 LEU LEU A . n A 1 20 ALA 20 174 174 ALA ALA A . n A 1 21 PHE 21 175 175 PHE PHE A . n A 1 22 LYS 22 176 176 LYS LYS A . n A 1 23 ARG 23 177 177 ARG ARG A . n A 1 24 GLY 24 178 178 GLY GLY A . n A 1 25 ASP 25 179 179 ASP ASP A . n A 1 26 VAL 26 180 180 VAL VAL A . n A 1 27 ILE 27 181 181 ILE ILE A . n A 1 28 THR 28 182 182 THR THR A . n A 1 29 LEU 29 183 183 LEU LEU A . n A 1 30 ILE 30 184 184 ILE ILE A . n A 1 31 ASN 31 185 185 ASN ASN A . n A 1 32 LYS 32 186 186 LYS LYS A . n A 1 33 ASP 33 187 187 ASP ASP A . n A 1 34 ASP 34 188 188 ASP ASP A . n A 1 35 PRO 35 189 189 PRO PRO A . n A 1 36 ASN 36 190 190 ASN ASN A . n A 1 37 TRP 37 191 191 TRP TRP A . n A 1 38 TRP 38 192 192 TRP TRP A . n A 1 39 GLU 39 193 193 GLU GLU A . n A 1 40 GLY 40 194 194 GLY GLY A . n A 1 41 GLN 41 195 195 GLN GLN A . n A 1 42 LEU 42 196 196 LEU LEU A . n A 1 43 ASN 43 197 197 ASN ASN A . n A 1 44 ASN 44 198 198 ASN ASN A . n A 1 45 ARG 45 199 199 ARG ARG A . n A 1 46 ARG 46 200 200 ARG ARG A . n A 1 47 GLY 47 201 201 GLY GLY A . n A 1 48 ILE 48 202 202 ILE ILE A . n A 1 49 PHE 49 203 203 PHE PHE A . n A 1 50 PRO 50 204 204 PRO PRO A . n A 1 51 SER 51 205 205 SER SER A . n A 1 52 ASN 52 206 206 ASN ASN A . n A 1 53 TYR 53 207 207 TYR TYR A . n A 1 54 VAL 54 208 208 VAL VAL A . n A 1 55 CYS 55 209 209 CYS CYS A . n A 1 56 PRO 56 210 210 PRO PRO A . n A 1 57 TYR 57 211 211 TYR TYR A . n A 1 58 ASN 58 212 212 ASN ASN A . n A 1 59 SER 59 213 ? ? ? A . n A 1 60 ASN 60 214 ? ? ? A . n B 1 1 GLU 1 255 255 GLU GLU B . n B 1 2 THR 2 256 256 THR THR B . n B 1 3 LYS 3 257 257 LYS LYS B . n B 1 4 PHE 4 258 258 PHE PHE B . n B 1 5 VAL 5 259 259 VAL VAL B . n B 1 6 GLN 6 260 260 GLN GLN B . n B 1 7 ALA 7 261 261 ALA ALA B . n B 1 8 LEU 8 262 262 LEU LEU B . n B 1 9 PHE 9 263 263 PHE PHE B . n B 1 10 ASP 10 264 264 ASP ASP B . n B 1 11 PHE 11 265 265 PHE PHE B . n B 1 12 ASN 12 266 266 ASN ASN B . n B 1 13 PRO 13 267 267 PRO PRO B . n B 1 14 GLN 14 268 268 GLN GLN B . n B 1 15 GLU 15 269 269 GLU GLU B . n B 1 16 SER 16 270 270 SER SER B . n B 1 17 GLY 17 271 271 GLY GLY B . n B 1 18 GLU 18 272 272 GLU GLU B . n B 1 19 LEU 19 273 273 LEU LEU B . n B 1 20 ALA 20 274 274 ALA ALA B . n B 1 21 PHE 21 275 275 PHE PHE B . n B 1 22 LYS 22 276 276 LYS LYS B . n B 1 23 ARG 23 277 277 ARG ARG B . n B 1 24 GLY 24 278 278 GLY GLY B . n B 1 25 ASP 25 279 279 ASP ASP B . n B 1 26 VAL 26 280 280 VAL VAL B . n B 1 27 ILE 27 281 281 ILE ILE B . n B 1 28 THR 28 282 282 THR THR B . n B 1 29 LEU 29 283 283 LEU LEU B . n B 1 30 ILE 30 284 284 ILE ILE B . n B 1 31 ASN 31 285 285 ASN ASN B . n B 1 32 LYS 32 286 286 LYS LYS B . n B 1 33 ASP 33 287 287 ASP ASP B . n B 1 34 ASP 34 288 288 ASP ASP B . n B 1 35 PRO 35 289 289 PRO PRO B . n B 1 36 ASN 36 290 290 ASN ASN B . n B 1 37 TRP 37 291 291 TRP TRP B . n B 1 38 TRP 38 292 292 TRP TRP B . n B 1 39 GLU 39 293 293 GLU GLU B . n B 1 40 GLY 40 294 294 GLY GLY B . n B 1 41 GLN 41 295 295 GLN GLN B . n B 1 42 LEU 42 296 296 LEU LEU B . n B 1 43 ASN 43 297 297 ASN ASN B . n B 1 44 ASN 44 298 298 ASN ASN B . n B 1 45 ARG 45 299 299 ARG ARG B . n B 1 46 ARG 46 300 300 ARG ARG B . n B 1 47 GLY 47 301 301 GLY GLY B . n B 1 48 ILE 48 302 302 ILE ILE B . n B 1 49 PHE 49 303 303 PHE PHE B . n B 1 50 PRO 50 304 304 PRO PRO B . n B 1 51 SER 51 305 305 SER SER B . n B 1 52 ASN 52 306 306 ASN ASN B . n B 1 53 TYR 53 307 307 TYR TYR B . n B 1 54 VAL 54 308 308 VAL VAL B . n B 1 55 CYS 55 309 309 CYS CYS B . n B 1 56 PRO 56 310 310 PRO PRO B . n B 1 57 TYR 57 311 311 TYR TYR B . n B 1 58 ASN 58 312 312 ASN ASN B . n B 1 59 SER 59 313 ? ? ? B . n B 1 60 ASN 60 314 ? ? ? B . n C 2 1 PRO 1 2 2 PRO PRO C . n C 2 2 PRO 2 3 3 PRO PRO C . n C 2 3 PRO 3 4 4 PRO PRO C . n C 2 4 VAL 4 5 5 VAL VAL C . n C 2 5 NMC 5 6 6 NMC NMC C . n C 2 6 PRO 6 7 7 PRO PRO C . n C 2 7 ARG 7 8 8 ARG ARG C . n C 2 8 ARG 8 9 ? ? ? C . n C 2 9 ARG 9 10 ? ? ? C . n D 2 1 PRO 1 12 12 PRO PRO D . n D 2 2 PRO 2 13 13 PRO PRO D . n D 2 3 PRO 3 14 14 PRO PRO D . n D 2 4 VAL 4 15 15 VAL VAL D . n D 2 5 NMC 5 16 16 NMC NMC D . n D 2 6 PRO 6 17 17 PRO PRO D . n D 2 7 ARG 7 18 ? ? ? D . n D 2 8 ARG 8 19 ? ? ? D . n D 2 9 ARG 9 20 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 21 21 HOH HOH A . E 3 HOH 2 22 22 HOH HOH A . E 3 HOH 3 24 24 HOH HOH A . E 3 HOH 4 25 25 HOH HOH A . E 3 HOH 5 26 26 HOH HOH A . E 3 HOH 6 27 27 HOH HOH A . E 3 HOH 7 28 28 HOH HOH A . E 3 HOH 8 29 29 HOH HOH A . E 3 HOH 9 31 31 HOH HOH A . E 3 HOH 10 33 33 HOH HOH A . E 3 HOH 11 34 34 HOH HOH A . E 3 HOH 12 35 35 HOH HOH A . E 3 HOH 13 36 36 HOH HOH A . E 3 HOH 14 39 39 HOH HOH A . E 3 HOH 15 41 41 HOH HOH A . E 3 HOH 16 43 43 HOH HOH A . E 3 HOH 17 44 44 HOH HOH A . E 3 HOH 18 45 45 HOH HOH A . E 3 HOH 19 47 47 HOH HOH A . F 3 HOH 1 20 20 HOH HOH B . F 3 HOH 2 23 23 HOH HOH B . F 3 HOH 3 30 30 HOH HOH B . F 3 HOH 4 32 32 HOH HOH B . F 3 HOH 5 37 37 HOH HOH B . F 3 HOH 6 38 38 HOH HOH B . F 3 HOH 7 40 40 HOH HOH B . F 3 HOH 8 46 46 HOH HOH B . G 3 HOH 1 42 42 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 212 ? CG ? A ASN 58 CG 2 1 Y 1 A ASN 212 ? OD1 ? A ASN 58 OD1 3 1 Y 1 A ASN 212 ? ND2 ? A ASN 58 ND2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement 3.843 ? 4 # _cell.entry_id 3SEM _cell.length_a 27.050 _cell.length_b 68.530 _cell.length_c 35.020 _cell.angle_alpha 90.00 _cell.angle_beta 93.86 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SEM _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3SEM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details 'pH 8.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 123 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1997-04-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3SEM _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.0 _reflns.number_obs 61158 _reflns.number_all ? _reflns.percent_possible_obs 90.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.083 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2. _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 64.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.434 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3SEM _refine.ls_number_reflns_obs 6292 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 10000000.0 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs 96 _refine.ls_R_factor_obs 0.248 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.248 _refine.ls_R_factor_R_free 0.31 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 655 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1SEM _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1056 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 1084 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.124 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.30 _refine_ls_shell.number_reflns_R_work 649 _refine_ls_shell.R_factor_R_work 0.361 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 9.9 _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.981600 _struct_ncs_oper.matrix[1][2] 0.113000 _struct_ncs_oper.matrix[1][3] 0.153900 _struct_ncs_oper.matrix[2][1] 0.113700 _struct_ncs_oper.matrix[2][2] -0.993500 _struct_ncs_oper.matrix[2][3] 0.004000 _struct_ncs_oper.matrix[3][1] 0.153400 _struct_ncs_oper.matrix[3][2] 0.013500 _struct_ncs_oper.matrix[3][3] -0.988100 _struct_ncs_oper.vector[1] -10.93150 _struct_ncs_oper.vector[2] 80.63640 _struct_ncs_oper.vector[3] 84.68880 # _database_PDB_matrix.entry_id 3SEM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3SEM _struct.title 'SEM5 SH3 DOMAIN COMPLEXED WITH PEPTOID INHIBITOR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SEM _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/INHIBITOR' _struct_keywords.text ;SH3 DOMAIN, INHIBITORS, PEPTOIDS, PROTEIN-PROTEIN RECOGNITION, PROLINE-RICH MOTIFS, SIGNAL TRANSDUCTION, SIGNALING PROTEIN-INHIBITOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP SEM5_CAEEL 1 P29355 ? ETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYNSN ? 2 PDB 3SEM 2 3SEM ? PPPVGPRRR ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SEM A 1 ? 60 ? P29355 155 ? 214 ? 155 214 2 1 3SEM B 1 ? 60 ? P29355 155 ? 214 ? 255 314 3 2 3SEM C 1 ? 9 ? 3SEM 2 ? 10 ? 2 10 4 2 3SEM D 1 ? 9 ? 3SEM 12 ? 20 ? 12 20 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 760 ? 1 MORE -5 ? 1 'SSA (A^2)' 4370 ? 2 'ABSA (A^2)' 620 ? 2 MORE -6 ? 2 'SSA (A^2)' 4370 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details 1 ? 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 51 ? TYR A 53 ? SER A 205 TYR A 207 5 ? 3 HELX_P HELX_P2 2 SER B 51 ? TYR B 53 ? SER B 305 TYR B 307 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 55 SG ? ? ? 1_555 B CYS 55 SG ? ? A CYS 209 B CYS 309 1_555 ? ? ? ? ? ? ? 2.036 ? ? covale1 covale both ? C VAL 4 C ? ? ? 1_555 C NMC 5 N ? ? C VAL 5 C NMC 6 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale2 covale both ? C NMC 5 C ? ? ? 1_555 C PRO 6 N ? ? C NMC 6 C PRO 7 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale3 covale both ? D VAL 4 C ? ? ? 1_555 D NMC 5 N ? ? D VAL 15 D NMC 16 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale4 covale both ? D NMC 5 C ? ? ? 1_555 D PRO 6 N ? ? D NMC 16 D PRO 17 1_555 ? ? ? ? ? ? ? 1.345 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NMC C 5 ? . . . . NMC C 6 ? 1_555 . . . . . . . GLY 1 NMC None 'Non-standard residue' 2 NMC D 5 ? . . . . NMC D 16 ? 1_555 . . . . . . . GLY 1 NMC None 'Non-standard residue' 3 CYS A 55 ? CYS B 55 ? CYS A 209 ? 1_555 CYS B 309 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 54 ? PRO A 56 ? VAL A 208 PRO A 210 A 2 PHE A 4 ? ALA A 7 ? PHE A 158 ALA A 161 A 3 VAL A 26 ? ASN A 31 ? VAL A 180 ASN A 185 A 4 TRP A 37 ? LEU A 42 ? TRP A 191 LEU A 196 A 5 ARG A 45 ? PRO A 50 ? ARG A 199 PRO A 204 B 1 VAL B 54 ? PRO B 56 ? VAL B 308 PRO B 310 B 2 PHE B 4 ? ALA B 7 ? PHE B 258 ALA B 261 B 3 VAL B 26 ? ASN B 31 ? VAL B 280 ASN B 285 B 4 TRP B 37 ? LEU B 42 ? TRP B 291 LEU B 296 B 5 ARG B 45 ? PRO B 50 ? ARG B 299 PRO B 304 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS A 55 ? O CYS A 209 N GLN A 6 ? N GLN A 160 A 2 3 O VAL A 5 ? O VAL A 159 N ILE A 27 ? N ILE A 181 A 3 4 O THR A 28 ? O THR A 182 N GLN A 41 ? N GLN A 195 A 4 5 O TRP A 38 ? O TRP A 192 N PHE A 49 ? N PHE A 203 B 1 2 O CYS B 55 ? O CYS B 309 N GLN B 6 ? N GLN B 260 B 2 3 O VAL B 5 ? O VAL B 259 N ILE B 27 ? N ILE B 281 B 3 4 O THR B 28 ? O THR B 282 N GLN B 41 ? N GLN B 295 B 4 5 O TRP B 38 ? O TRP B 292 N PHE B 49 ? N PHE B 303 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR CHAIN C OF SH3 PEPTOID INHIBITOR' AC2 Software ? ? ? ? 6 'BINDING SITE FOR CHAIN D OF SH3 PEPTOID INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 PHE A 9 ? PHE A 163 . ? 1_555 ? 2 AC1 9 GLN A 14 ? GLN A 168 . ? 1_555 ? 3 AC1 9 GLU A 15 ? GLU A 169 . ? 1_555 ? 4 AC1 9 GLU A 18 ? GLU A 172 . ? 1_555 ? 5 AC1 9 ASN A 36 ? ASN A 190 . ? 1_555 ? 6 AC1 9 TRP A 37 ? TRP A 191 . ? 1_555 ? 7 AC1 9 PRO A 50 ? PRO A 204 . ? 1_555 ? 8 AC1 9 ASN A 52 ? ASN A 206 . ? 1_555 ? 9 AC1 9 TYR A 53 ? TYR A 207 . ? 1_555 ? 10 AC2 6 PHE B 9 ? PHE B 263 . ? 1_555 ? 11 AC2 6 ASN B 36 ? ASN B 290 . ? 1_555 ? 12 AC2 6 TRP B 37 ? TRP B 291 . ? 1_555 ? 13 AC2 6 PRO B 50 ? PRO B 304 . ? 1_555 ? 14 AC2 6 ASN B 52 ? ASN B 306 . ? 1_555 ? 15 AC2 6 TYR B 53 ? TYR B 307 . ? 1_555 ? # _pdbx_entry_details.entry_id 3SEM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 197 ? ? 68.80 -107.30 2 1 TYR A 211 ? ? -131.55 -54.87 3 1 ASP B 287 ? ? -29.73 -62.83 4 1 PRO B 289 ? ? -59.47 -9.70 5 1 ASN B 297 ? ? 71.77 -116.13 6 1 NMC D 16 ? ? -63.05 -144.04 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C NMC 5 C NMC 6 ? GLY 'N-CYCLOPROPYLMETHYL GLYCINE' 2 D NMC 5 D NMC 16 ? GLY 'N-CYCLOPROPYLMETHYL GLYCINE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 213 ? A SER 59 2 1 Y 1 A ASN 214 ? A ASN 60 3 1 Y 1 B SER 313 ? B SER 59 4 1 Y 1 B ASN 314 ? B ASN 60 5 1 Y 1 C ARG 9 ? C ARG 8 6 1 Y 1 C ARG 10 ? C ARG 9 7 1 Y 1 D ARG 18 ? D ARG 7 8 1 Y 1 D ARG 19 ? D ARG 8 9 1 Y 1 D ARG 20 ? D ARG 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 NMC N N N N 209 NMC CA C N N 210 NMC C C N N 211 NMC O O N N 212 NMC CN C N N 213 NMC CX1 C N N 214 NMC CX2 C N N 215 NMC CX3 C N N 216 NMC OXT O N N 217 NMC H H N N 218 NMC HA3 H N N 219 NMC HA2 H N N 220 NMC HCN1 H N N 221 NMC HCN2 H N N 222 NMC HCX1 H N N 223 NMC HC21 H N N 224 NMC HC22 H N N 225 NMC HC31 H N N 226 NMC HC32 H N N 227 NMC HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TRP N N N N 300 TRP CA C N S 301 TRP C C N N 302 TRP O O N N 303 TRP CB C N N 304 TRP CG C Y N 305 TRP CD1 C Y N 306 TRP CD2 C Y N 307 TRP NE1 N Y N 308 TRP CE2 C Y N 309 TRP CE3 C Y N 310 TRP CZ2 C Y N 311 TRP CZ3 C Y N 312 TRP CH2 C Y N 313 TRP OXT O N N 314 TRP H H N N 315 TRP H2 H N N 316 TRP HA H N N 317 TRP HB2 H N N 318 TRP HB3 H N N 319 TRP HD1 H N N 320 TRP HE1 H N N 321 TRP HE3 H N N 322 TRP HZ2 H N N 323 TRP HZ3 H N N 324 TRP HH2 H N N 325 TRP HXT H N N 326 TYR N N N N 327 TYR CA C N S 328 TYR C C N N 329 TYR O O N N 330 TYR CB C N N 331 TYR CG C Y N 332 TYR CD1 C Y N 333 TYR CD2 C Y N 334 TYR CE1 C Y N 335 TYR CE2 C Y N 336 TYR CZ C Y N 337 TYR OH O N N 338 TYR OXT O N N 339 TYR H H N N 340 TYR H2 H N N 341 TYR HA H N N 342 TYR HB2 H N N 343 TYR HB3 H N N 344 TYR HD1 H N N 345 TYR HD2 H N N 346 TYR HE1 H N N 347 TYR HE2 H N N 348 TYR HH H N N 349 TYR HXT H N N 350 VAL N N N N 351 VAL CA C N S 352 VAL C C N N 353 VAL O O N N 354 VAL CB C N N 355 VAL CG1 C N N 356 VAL CG2 C N N 357 VAL OXT O N N 358 VAL H H N N 359 VAL H2 H N N 360 VAL HA H N N 361 VAL HB H N N 362 VAL HG11 H N N 363 VAL HG12 H N N 364 VAL HG13 H N N 365 VAL HG21 H N N 366 VAL HG22 H N N 367 VAL HG23 H N N 368 VAL HXT H N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 NMC N CA sing N N 197 NMC N CN sing N N 198 NMC N H sing N N 199 NMC CA C sing N N 200 NMC CA HA3 sing N N 201 NMC CA HA2 sing N N 202 NMC C O doub N N 203 NMC C OXT sing N N 204 NMC CN CX1 sing N N 205 NMC CN HCN1 sing N N 206 NMC CN HCN2 sing N N 207 NMC CX1 CX2 sing N N 208 NMC CX1 CX3 sing N N 209 NMC CX1 HCX1 sing N N 210 NMC CX2 CX3 sing N N 211 NMC CX2 HC21 sing N N 212 NMC CX2 HC22 sing N N 213 NMC CX3 HC31 sing N N 214 NMC CX3 HC32 sing N N 215 NMC OXT HXT sing N N 216 PHE N CA sing N N 217 PHE N H sing N N 218 PHE N H2 sing N N 219 PHE CA C sing N N 220 PHE CA CB sing N N 221 PHE CA HA sing N N 222 PHE C O doub N N 223 PHE C OXT sing N N 224 PHE CB CG sing N N 225 PHE CB HB2 sing N N 226 PHE CB HB3 sing N N 227 PHE CG CD1 doub Y N 228 PHE CG CD2 sing Y N 229 PHE CD1 CE1 sing Y N 230 PHE CD1 HD1 sing N N 231 PHE CD2 CE2 doub Y N 232 PHE CD2 HD2 sing N N 233 PHE CE1 CZ doub Y N 234 PHE CE1 HE1 sing N N 235 PHE CE2 CZ sing Y N 236 PHE CE2 HE2 sing N N 237 PHE CZ HZ sing N N 238 PHE OXT HXT sing N N 239 PRO N CA sing N N 240 PRO N CD sing N N 241 PRO N H sing N N 242 PRO CA C sing N N 243 PRO CA CB sing N N 244 PRO CA HA sing N N 245 PRO C O doub N N 246 PRO C OXT sing N N 247 PRO CB CG sing N N 248 PRO CB HB2 sing N N 249 PRO CB HB3 sing N N 250 PRO CG CD sing N N 251 PRO CG HG2 sing N N 252 PRO CG HG3 sing N N 253 PRO CD HD2 sing N N 254 PRO CD HD3 sing N N 255 PRO OXT HXT sing N N 256 SER N CA sing N N 257 SER N H sing N N 258 SER N H2 sing N N 259 SER CA C sing N N 260 SER CA CB sing N N 261 SER CA HA sing N N 262 SER C O doub N N 263 SER C OXT sing N N 264 SER CB OG sing N N 265 SER CB HB2 sing N N 266 SER CB HB3 sing N N 267 SER OG HG sing N N 268 SER OXT HXT sing N N 269 THR N CA sing N N 270 THR N H sing N N 271 THR N H2 sing N N 272 THR CA C sing N N 273 THR CA CB sing N N 274 THR CA HA sing N N 275 THR C O doub N N 276 THR C OXT sing N N 277 THR CB OG1 sing N N 278 THR CB CG2 sing N N 279 THR CB HB sing N N 280 THR OG1 HG1 sing N N 281 THR CG2 HG21 sing N N 282 THR CG2 HG22 sing N N 283 THR CG2 HG23 sing N N 284 THR OXT HXT sing N N 285 TRP N CA sing N N 286 TRP N H sing N N 287 TRP N H2 sing N N 288 TRP CA C sing N N 289 TRP CA CB sing N N 290 TRP CA HA sing N N 291 TRP C O doub N N 292 TRP C OXT sing N N 293 TRP CB CG sing N N 294 TRP CB HB2 sing N N 295 TRP CB HB3 sing N N 296 TRP CG CD1 doub Y N 297 TRP CG CD2 sing Y N 298 TRP CD1 NE1 sing Y N 299 TRP CD1 HD1 sing N N 300 TRP CD2 CE2 doub Y N 301 TRP CD2 CE3 sing Y N 302 TRP NE1 CE2 sing Y N 303 TRP NE1 HE1 sing N N 304 TRP CE2 CZ2 sing Y N 305 TRP CE3 CZ3 doub Y N 306 TRP CE3 HE3 sing N N 307 TRP CZ2 CH2 doub Y N 308 TRP CZ2 HZ2 sing N N 309 TRP CZ3 CH2 sing Y N 310 TRP CZ3 HZ3 sing N N 311 TRP CH2 HH2 sing N N 312 TRP OXT HXT sing N N 313 TYR N CA sing N N 314 TYR N H sing N N 315 TYR N H2 sing N N 316 TYR CA C sing N N 317 TYR CA CB sing N N 318 TYR CA HA sing N N 319 TYR C O doub N N 320 TYR C OXT sing N N 321 TYR CB CG sing N N 322 TYR CB HB2 sing N N 323 TYR CB HB3 sing N N 324 TYR CG CD1 doub Y N 325 TYR CG CD2 sing Y N 326 TYR CD1 CE1 sing Y N 327 TYR CD1 HD1 sing N N 328 TYR CD2 CE2 doub Y N 329 TYR CD2 HD2 sing N N 330 TYR CE1 CZ doub Y N 331 TYR CE1 HE1 sing N N 332 TYR CE2 CZ sing Y N 333 TYR CE2 HE2 sing N N 334 TYR CZ OH sing N N 335 TYR OH HH sing N N 336 TYR OXT HXT sing N N 337 VAL N CA sing N N 338 VAL N H sing N N 339 VAL N H2 sing N N 340 VAL CA C sing N N 341 VAL CA CB sing N N 342 VAL CA HA sing N N 343 VAL C O doub N N 344 VAL C OXT sing N N 345 VAL CB CG1 sing N N 346 VAL CB CG2 sing N N 347 VAL CB HB sing N N 348 VAL CG1 HG11 sing N N 349 VAL CG1 HG12 sing N N 350 VAL CG1 HG13 sing N N 351 VAL CG2 HG21 sing N N 352 VAL CG2 HG22 sing N N 353 VAL CG2 HG23 sing N N 354 VAL OXT HXT sing N N 355 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SEM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 3SEM _atom_sites.fract_transf_matrix[1][1] 0.036968 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002494 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014592 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028620 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_