HEADER STRUCTURAL PROTEIN 10-JUN-11 3SEO TITLE CRYSTAL STRUCTURE OF VOPL C TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: VOPL C TERMINAL DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 247-484; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO PARAHAEMOLYTICUS; SOURCE 3 ORGANISM_TAXID: 670; SOURCE 4 GENE: VOPL, VPA1370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX2T KEYWDS ALPHA HELIX, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.YU,M.K.ROSEN,D.R.TOMCHICK REVDAT 4 28-FEB-24 3SEO 1 REMARK SEQADV REVDAT 3 08-NOV-17 3SEO 1 REMARK REVDAT 2 23-MAY-12 3SEO 1 JRNL REVDAT 1 31-AUG-11 3SEO 0 JRNL AUTH B.YU,H.C.CHENG,C.A.BRAUTIGAM,D.R.TOMCHICK,M.K.ROSEN JRNL TITL MECHANISM OF ACTIN FILAMENT NUCLEATION BY THE BACTERIAL JRNL TITL 2 EFFECTOR VOPL. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 1068 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 21873984 JRNL DOI 10.1038/NSMB.2110 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 23040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.480 REMARK 3 FREE R VALUE TEST SET COUNT : 1954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1549 - 4.9584 0.93 2114 196 0.2196 0.2549 REMARK 3 2 4.9584 - 3.9387 1.00 2153 200 0.1950 0.2472 REMARK 3 3 3.9387 - 3.4417 1.00 2133 197 0.2049 0.2774 REMARK 3 4 3.4417 - 3.1274 1.00 2132 198 0.2241 0.2679 REMARK 3 5 3.1274 - 2.9035 1.00 2093 194 0.2450 0.3126 REMARK 3 6 2.9035 - 2.7324 1.00 2121 196 0.2533 0.3395 REMARK 3 7 2.7324 - 2.5957 1.00 2112 196 0.2668 0.3407 REMARK 3 8 2.5957 - 2.4828 1.00 2093 194 0.2553 0.3162 REMARK 3 9 2.4828 - 2.3872 1.00 2075 192 0.2753 0.3301 REMARK 3 10 2.3872 - 2.3049 0.99 2060 191 0.2762 0.3348 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 73.75 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.09940 REMARK 3 B22 (A**2) : -1.94690 REMARK 3 B33 (A**2) : -1.15250 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3561 REMARK 3 ANGLE : 0.564 4789 REMARK 3 CHIRALITY : 0.043 533 REMARK 3 PLANARITY : 0.002 625 REMARK 3 DIHEDRAL : 11.690 1325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:19) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6066 39.1769 15.0529 REMARK 3 T TENSOR REMARK 3 T11: 0.9874 T22: 0.3737 REMARK 3 T33: 0.4389 T12: -0.0031 REMARK 3 T13: -0.1096 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 3.5684 L22: 0.0445 REMARK 3 L33: 3.6748 L12: -0.7309 REMARK 3 L13: -1.5391 L23: 0.2177 REMARK 3 S TENSOR REMARK 3 S11: 0.2696 S12: 0.0366 S13: 0.7118 REMARK 3 S21: -0.4004 S22: 0.0034 S23: -0.1348 REMARK 3 S31: -0.2996 S32: 0.0272 S33: -0.1744 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 20:41) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6766 36.9897 24.6369 REMARK 3 T TENSOR REMARK 3 T11: 0.6001 T22: 0.4769 REMARK 3 T33: 0.5900 T12: -0.0436 REMARK 3 T13: -0.1402 T23: -0.0927 REMARK 3 L TENSOR REMARK 3 L11: 2.0374 L22: 2.5315 REMARK 3 L33: 8.3023 L12: 1.0773 REMARK 3 L13: 2.1689 L23: 0.1350 REMARK 3 S TENSOR REMARK 3 S11: 0.3193 S12: -0.3251 S13: 0.2744 REMARK 3 S21: 0.7736 S22: 0.8440 S23: -0.3141 REMARK 3 S31: -2.0911 S32: -0.5370 S33: -0.2276 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 42:56) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3778 26.1006 47.8478 REMARK 3 T TENSOR REMARK 3 T11: 1.1324 T22: 0.9045 REMARK 3 T33: 0.7039 T12: 0.0750 REMARK 3 T13: -0.3284 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 6.9512 L22: 1.5796 REMARK 3 L33: 4.9489 L12: -0.2182 REMARK 3 L13: 3.9184 L23: -1.4003 REMARK 3 S TENSOR REMARK 3 S11: 1.1203 S12: 1.9681 S13: 0.3371 REMARK 3 S21: -2.1534 S22: -0.0096 S23: 1.1555 REMARK 3 S31: 1.4642 S32: 0.5746 S33: -0.7749 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 57:72) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4290 34.2005 48.2935 REMARK 3 T TENSOR REMARK 3 T11: 0.7837 T22: 2.1762 REMARK 3 T33: 0.6712 T12: 0.6296 REMARK 3 T13: -0.4504 T23: -0.3091 REMARK 3 L TENSOR REMARK 3 L11: 5.3803 L22: 3.4357 REMARK 3 L33: 2.6793 L12: 2.7044 REMARK 3 L13: 1.3701 L23: 1.9060 REMARK 3 S TENSOR REMARK 3 S11: -0.3018 S12: 0.3249 S13: 0.7541 REMARK 3 S21: -0.2858 S22: 1.9397 S23: 1.3033 REMARK 3 S31: 2.2481 S32: 5.4912 S33: -0.9692 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 73:118) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2882 29.5499 59.1187 REMARK 3 T TENSOR REMARK 3 T11: 1.1565 T22: 0.8082 REMARK 3 T33: 0.9359 T12: -0.0550 REMARK 3 T13: -0.3022 T23: 0.2348 REMARK 3 L TENSOR REMARK 3 L11: 6.7015 L22: 1.8824 REMARK 3 L33: 3.4205 L12: -0.2751 REMARK 3 L13: 1.2571 L23: 0.4582 REMARK 3 S TENSOR REMARK 3 S11: 0.9121 S12: -1.8374 S13: -1.3705 REMARK 3 S21: 0.4627 S22: -0.2821 S23: 0.1614 REMARK 3 S31: 1.8419 S32: -0.0455 S33: -0.3407 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 119:159) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0970 34.4063 44.3223 REMARK 3 T TENSOR REMARK 3 T11: 0.5147 T22: 0.6782 REMARK 3 T33: 0.6321 T12: 0.2499 REMARK 3 T13: -0.2710 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 1.0554 L22: -0.2113 REMARK 3 L33: 3.2892 L12: 0.6316 REMARK 3 L13: -0.4580 L23: -0.1806 REMARK 3 S TENSOR REMARK 3 S11: -0.1526 S12: -0.1835 S13: -0.2917 REMARK 3 S21: 0.0878 S22: 0.5529 S23: -0.1855 REMARK 3 S31: 0.5262 S32: 0.6147 S33: -0.2807 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 160:185) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9599 25.3649 23.3758 REMARK 3 T TENSOR REMARK 3 T11: 0.5150 T22: 0.4828 REMARK 3 T33: 0.4397 T12: 0.0729 REMARK 3 T13: -0.0753 T23: -0.0423 REMARK 3 L TENSOR REMARK 3 L11: 2.9703 L22: 2.3127 REMARK 3 L33: 0.7769 L12: 2.4478 REMARK 3 L13: 0.3353 L23: -0.1922 REMARK 3 S TENSOR REMARK 3 S11: 0.1374 S12: -0.8003 S13: -0.2025 REMARK 3 S21: 0.2512 S22: -0.1351 S23: -0.0182 REMARK 3 S31: 0.0550 S32: -0.4213 S33: 0.0427 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 186:240) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5177 24.3923 9.3764 REMARK 3 T TENSOR REMARK 3 T11: 0.4790 T22: 0.4654 REMARK 3 T33: 0.4877 T12: -0.0424 REMARK 3 T13: 0.0031 T23: -0.0641 REMARK 3 L TENSOR REMARK 3 L11: -0.6051 L22: 2.2080 REMARK 3 L33: 3.5431 L12: 1.1441 REMARK 3 L13: 0.5455 L23: 1.7113 REMARK 3 S TENSOR REMARK 3 S11: -0.1521 S12: 0.3153 S13: -0.0081 REMARK 3 S21: -0.1865 S22: 0.2973 S23: -0.4842 REMARK 3 S31: -0.2288 S32: 0.4610 S33: -0.1482 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 2:12) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5589 -2.3827 17.5981 REMARK 3 T TENSOR REMARK 3 T11: 0.7082 T22: 0.6601 REMARK 3 T33: 0.6755 T12: -0.0040 REMARK 3 T13: -0.0726 T23: 0.2300 REMARK 3 L TENSOR REMARK 3 L11: 4.1774 L22: 9.8804 REMARK 3 L33: 1.3944 L12: 4.0795 REMARK 3 L13: 1.0091 L23: 0.9642 REMARK 3 S TENSOR REMARK 3 S11: -0.1682 S12: 0.0020 S13: -1.0352 REMARK 3 S21: 0.9474 S22: 0.7667 S23: -1.5639 REMARK 3 S31: -0.1053 S32: 0.1994 S33: -0.3785 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 13:57) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5247 2.2107 16.1778 REMARK 3 T TENSOR REMARK 3 T11: 0.3588 T22: 0.5538 REMARK 3 T33: 0.6220 T12: 0.0198 REMARK 3 T13: -0.0881 T23: 0.2508 REMARK 3 L TENSOR REMARK 3 L11: 2.5297 L22: 4.1915 REMARK 3 L33: 2.7712 L12: 0.4493 REMARK 3 L13: -2.7960 L23: -0.4673 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: 0.9207 S13: -0.5746 REMARK 3 S21: -0.3335 S22: 0.1556 S23: 0.8744 REMARK 3 S31: -0.2967 S32: -0.7660 S33: -0.2707 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 58:107) REMARK 3 ORIGIN FOR THE GROUP (A): -37.4253 4.9057 31.8431 REMARK 3 T TENSOR REMARK 3 T11: 0.5916 T22: 0.8063 REMARK 3 T33: 1.0067 T12: 0.2291 REMARK 3 T13: 0.1983 T23: 0.3895 REMARK 3 L TENSOR REMARK 3 L11: 1.7311 L22: 1.5399 REMARK 3 L33: 6.6557 L12: -0.1523 REMARK 3 L13: -3.2616 L23: 2.0180 REMARK 3 S TENSOR REMARK 3 S11: 0.8859 S12: 0.3234 S13: 0.4516 REMARK 3 S21: -0.0696 S22: -0.6783 S23: 0.0525 REMARK 3 S31: -0.7238 S32: -2.0398 S33: -0.4854 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 108:118) REMARK 3 ORIGIN FOR THE GROUP (A): -30.5333 3.3099 43.1305 REMARK 3 T TENSOR REMARK 3 T11: 0.9231 T22: 0.8189 REMARK 3 T33: 0.4943 T12: -0.2701 REMARK 3 T13: -0.0340 T23: -0.0787 REMARK 3 L TENSOR REMARK 3 L11: 0.8512 L22: 4.1567 REMARK 3 L33: 0.7765 L12: -0.3486 REMARK 3 L13: 0.2795 L23: 0.9029 REMARK 3 S TENSOR REMARK 3 S11: -1.0218 S12: -0.0248 S13: -0.1901 REMARK 3 S21: 0.2601 S22: 1.5369 S23: -1.1518 REMARK 3 S31: 0.8908 S32: 1.0242 S33: -0.4069 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 119:152) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9116 1.5234 27.9711 REMARK 3 T TENSOR REMARK 3 T11: 0.3812 T22: 0.5570 REMARK 3 T33: 0.7225 T12: 0.1044 REMARK 3 T13: -0.0395 T23: 0.1959 REMARK 3 L TENSOR REMARK 3 L11: 5.0405 L22: 0.4144 REMARK 3 L33: 1.9402 L12: 1.7744 REMARK 3 L13: -2.3381 L23: -0.9288 REMARK 3 S TENSOR REMARK 3 S11: 0.4942 S12: 0.2940 S13: 0.5371 REMARK 3 S21: 0.0659 S22: 0.1213 S23: 0.2270 REMARK 3 S31: 0.1708 S32: 0.3271 S33: -0.4293 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 153:182) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8580 12.2541 16.8610 REMARK 3 T TENSOR REMARK 3 T11: 0.4177 T22: 0.5057 REMARK 3 T33: 0.4098 T12: -0.0356 REMARK 3 T13: -0.0483 T23: 0.1332 REMARK 3 L TENSOR REMARK 3 L11: 3.6765 L22: 4.5402 REMARK 3 L33: 1.4114 L12: 2.3000 REMARK 3 L13: -1.2975 L23: 0.1002 REMARK 3 S TENSOR REMARK 3 S11: -0.0666 S12: -0.4845 S13: 0.4005 REMARK 3 S21: 0.4950 S22: 0.1324 S23: 0.2243 REMARK 3 S31: -0.0941 S32: -0.2860 S33: -0.1995 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 183:196) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3433 12.6462 5.4049 REMARK 3 T TENSOR REMARK 3 T11: 0.5180 T22: 0.6399 REMARK 3 T33: 0.6254 T12: -0.1598 REMARK 3 T13: -0.1907 T23: 0.2851 REMARK 3 L TENSOR REMARK 3 L11: 1.4169 L22: 0.8619 REMARK 3 L33: 0.7300 L12: 0.0502 REMARK 3 L13: -0.3555 L23: -0.3152 REMARK 3 S TENSOR REMARK 3 S11: -0.3924 S12: 0.1135 S13: 0.7233 REMARK 3 S21: -0.4451 S22: 0.7560 S23: 0.7871 REMARK 3 S31: -0.0887 S32: -0.8342 S33: -0.3800 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 197:241) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1088 9.5581 3.0524 REMARK 3 T TENSOR REMARK 3 T11: 0.4776 T22: 0.3781 REMARK 3 T33: 0.4104 T12: -0.0374 REMARK 3 T13: 0.0207 T23: -0.0719 REMARK 3 L TENSOR REMARK 3 L11: 2.1268 L22: 1.7677 REMARK 3 L33: 3.8070 L12: 1.7827 REMARK 3 L13: -2.9430 L23: -1.7644 REMARK 3 S TENSOR REMARK 3 S11: -0.0612 S12: 0.0721 S13: -0.2192 REMARK 3 S21: -0.2342 S22: 0.3423 S23: 0.1546 REMARK 3 S31: -0.1220 S32: -0.2993 S33: -0.2497 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SEO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066109. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 150 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23092 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.78500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG1500, 100MM TRIS PH=7.5, 100MM REMARK 280 NACL, 2MM TCEP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, REMARK 280 PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.59000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.50350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.92550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.50350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.59000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.92550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ARG A 50 REMARK 465 GLY A 51 REMARK 465 LEU A 52 REMARK 465 CYS A 78 REMARK 465 TYR A 79 REMARK 465 LYS A 80 REMARK 465 SER A 81 REMARK 465 ALA A 82 REMARK 465 ASP A 83 REMARK 465 VAL A 84 REMARK 465 ALA A 85 REMARK 465 SER A 86 REMARK 465 PRO A 87 REMARK 465 GLU A 88 REMARK 465 SER A 89 REMARK 465 PRO A 90 REMARK 465 LYS A 91 REMARK 465 SER A 92 REMARK 465 GLY A 93 REMARK 465 GLY A 94 REMARK 465 GLY A 95 REMARK 465 SER A 241 REMARK 465 ALA B 82 REMARK 465 ASP B 83 REMARK 465 VAL B 84 REMARK 465 ALA B 85 REMARK 465 SER B 86 REMARK 465 PRO B 87 REMARK 465 GLU B 88 REMARK 465 SER B 89 REMARK 465 PRO B 90 REMARK 465 LYS B 91 REMARK 465 SER B 92 REMARK 465 GLY B 93 REMARK 465 GLY B 94 REMARK 465 GLY B 95 REMARK 465 SER B 241 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 96 OG REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 VAL B 100 CG1 CG2 REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 GLU B 132 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 16 NZ REMARK 480 GLN A 20 CG CD OE1 NE2 REMARK 480 VAL A 44 CG2 REMARK 480 GLU A 56 CB CG CD OE1 OE2 REMARK 480 GLU A 61 CB CG CD OE1 OE2 REMARK 480 ARG A 63 NE CZ NH1 NH2 REMARK 480 ARG A 70 CD NE CZ NH1 NH2 REMARK 480 GLU A 71 CG CD OE1 OE2 REMARK 480 ILE A 72 CG1 CG2 CD1 REMARK 480 LYS A 74 CG CD CE NZ REMARK 480 TYR A 75 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 ASP A 77 CB CG OD1 OD2 REMARK 480 VAL A 100 CG1 CG2 REMARK 480 LYS A 103 CB CG CD CE NZ REMARK 480 ARG A 104 CG CD NE CZ NH1 NH2 REMARK 480 GLN A 106 CB CG CD OE1 NE2 REMARK 480 THR A 107 OG1 CG2 REMARK 480 ARG A 109 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 110 CB CG CD OE1 OE2 REMARK 480 ARG A 111 CG CD NE CZ REMARK 480 ASP A 117 CB CG OD1 OD2 REMARK 480 ARG A 122 CB CG CD NE REMARK 480 LYS A 125 CB CG CD REMARK 480 ILE A 130 CD1 REMARK 480 LEU A 131 CD2 REMARK 480 GLN A 200 CG CD OE1 NE2 REMARK 480 LEU A 236 CD1 CD2 REMARK 480 ARG B 4 CD NE CZ NH1 NH2 REMARK 480 LYS B 12 CD CE NZ REMARK 480 GLN B 20 CB CG CD OE1 NE2 REMARK 480 LEU B 52 CD2 REMARK 480 GLU B 55 CB CG CD OE1 OE2 REMARK 480 LYS B 59 CD CE NZ REMARK 480 GLU B 61 CD REMARK 480 LYS B 80 CG CD CE NZ REMARK 480 ARG B 109 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 111 CD NE CZ NH1 NH2 REMARK 480 GLU B 174 CD OE1 OE2 REMARK 480 LYS B 178 CD CE NZ REMARK 480 ASP B 196 CG OD1 OD2 REMARK 480 LYS B 199 NZ REMARK 480 LYS B 204 CG CD CE NZ REMARK 480 LEU B 233 CD1 REMARK 480 SER B 237 CB OG REMARK 480 LYS B 239 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 109 -114.78 52.13 REMARK 500 SER A 152 -115.10 57.37 REMARK 500 LYS A 239 -9.52 -57.43 REMARK 500 GLU B 110 -5.35 83.22 REMARK 500 SER B 152 -124.95 65.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 248 DBREF 3SEO A 4 241 UNP Q87GE5 Q87GE5_VIBPA 247 484 DBREF 3SEO B 4 241 UNP Q87GE5 Q87GE5_VIBPA 247 484 SEQADV 3SEO GLY A 1 UNP Q87GE5 EXPRESSION TAG SEQADV 3SEO HIS A 2 UNP Q87GE5 EXPRESSION TAG SEQADV 3SEO MET A 3 UNP Q87GE5 EXPRESSION TAG SEQADV 3SEO GLY B 1 UNP Q87GE5 EXPRESSION TAG SEQADV 3SEO HIS B 2 UNP Q87GE5 EXPRESSION TAG SEQADV 3SEO MET B 3 UNP Q87GE5 EXPRESSION TAG SEQRES 1 A 241 GLY HIS MET ARG LEU LEU SER GLU ASP LEU PHE LYS GLN SEQRES 2 A 241 SER PRO LYS LEU SER GLU GLN GLU LEU ASP GLU LEU ALA SEQRES 3 A 241 ASN ASN LEU ALA ASP TYR LEU PHE GLN ALA ALA ASP ILE SEQRES 4 A 241 ASP TRP HIS GLN VAL ILE SER GLU LYS THR ARG GLY LEU SEQRES 5 A 241 THR THR GLU GLU MET ALA LYS SER GLU HIS ARG TYR VAL SEQRES 6 A 241 GLN ALA PHE CYS ARG GLU ILE LEU LYS TYR PRO ASP CYS SEQRES 7 A 241 TYR LYS SER ALA ASP VAL ALA SER PRO GLU SER PRO LYS SEQRES 8 A 241 SER GLY GLY GLY SER VAL ILE ASP VAL ALA LEU LYS ARG SEQRES 9 A 241 LEU GLN THR GLY ARG GLU ARG LEU PHE THR THR THR ASP SEQRES 10 A 241 GLU LYS GLY ASN ARG GLU LEU LYS LYS GLY ASP ALA ILE SEQRES 11 A 241 LEU GLU SER ALA ILE ASN ALA ALA ARG MET ALA ILE SER SEQRES 12 A 241 THR GLU GLU LYS ASN THR ILE LEU SER ASN ASN VAL LYS SEQRES 13 A 241 SER ALA THR PHE GLU VAL PHE CYS GLU LEU PRO CYS MET SEQRES 14 A 241 ASP GLY PHE ALA GLU GLN ASN GLY LYS THR ALA PHE TYR SEQRES 15 A 241 ALA LEU ARG ALA GLY PHE TYR SER ALA PHE LYS ASN THR SEQRES 16 A 241 ASP THR ALA LYS GLN ASP ILE THR LYS PHE MET LYS ASP SEQRES 17 A 241 ASN LEU GLN ALA GLY PHE SER GLY TYR SER TYR GLN GLY SEQRES 18 A 241 LEU THR ASN ARG VAL ALA GLN LEU GLU ALA GLN LEU ALA SEQRES 19 A 241 ALA LEU SER ALA LYS LEU SER SEQRES 1 B 241 GLY HIS MET ARG LEU LEU SER GLU ASP LEU PHE LYS GLN SEQRES 2 B 241 SER PRO LYS LEU SER GLU GLN GLU LEU ASP GLU LEU ALA SEQRES 3 B 241 ASN ASN LEU ALA ASP TYR LEU PHE GLN ALA ALA ASP ILE SEQRES 4 B 241 ASP TRP HIS GLN VAL ILE SER GLU LYS THR ARG GLY LEU SEQRES 5 B 241 THR THR GLU GLU MET ALA LYS SER GLU HIS ARG TYR VAL SEQRES 6 B 241 GLN ALA PHE CYS ARG GLU ILE LEU LYS TYR PRO ASP CYS SEQRES 7 B 241 TYR LYS SER ALA ASP VAL ALA SER PRO GLU SER PRO LYS SEQRES 8 B 241 SER GLY GLY GLY SER VAL ILE ASP VAL ALA LEU LYS ARG SEQRES 9 B 241 LEU GLN THR GLY ARG GLU ARG LEU PHE THR THR THR ASP SEQRES 10 B 241 GLU LYS GLY ASN ARG GLU LEU LYS LYS GLY ASP ALA ILE SEQRES 11 B 241 LEU GLU SER ALA ILE ASN ALA ALA ARG MET ALA ILE SER SEQRES 12 B 241 THR GLU GLU LYS ASN THR ILE LEU SER ASN ASN VAL LYS SEQRES 13 B 241 SER ALA THR PHE GLU VAL PHE CYS GLU LEU PRO CYS MET SEQRES 14 B 241 ASP GLY PHE ALA GLU GLN ASN GLY LYS THR ALA PHE TYR SEQRES 15 B 241 ALA LEU ARG ALA GLY PHE TYR SER ALA PHE LYS ASN THR SEQRES 16 B 241 ASP THR ALA LYS GLN ASP ILE THR LYS PHE MET LYS ASP SEQRES 17 B 241 ASN LEU GLN ALA GLY PHE SER GLY TYR SER TYR GLN GLY SEQRES 18 B 241 LEU THR ASN ARG VAL ALA GLN LEU GLU ALA GLN LEU ALA SEQRES 19 B 241 ALA LEU SER ALA LYS LEU SER HET CL A 242 1 HET CL B 242 1 HET CL B 243 1 HET CL B 244 1 HET CL B 245 1 HET CL B 246 1 HET CL B 247 1 HET CL B 248 1 HET CL B 249 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 9(CL 1-) FORMUL 12 HOH *36(H2 O) HELIX 1 1 MET A 3 SER A 7 5 5 HELIX 2 2 ASP A 9 SER A 14 1 6 HELIX 3 3 PRO A 15 LEU A 17 5 3 HELIX 4 4 SER A 18 ALA A 37 1 20 HELIX 5 5 ASP A 40 LYS A 48 1 9 HELIX 6 6 THR A 53 LYS A 59 1 7 HELIX 7 7 HIS A 62 LEU A 73 1 12 HELIX 8 8 SER A 96 GLN A 106 1 11 HELIX 9 9 GLY A 127 ALA A 141 1 15 HELIX 10 10 SER A 143 SER A 152 1 10 HELIX 11 11 ASN A 154 CYS A 164 1 11 HELIX 12 12 GLU A 165 ASP A 170 5 6 HELIX 13 13 GLY A 171 GLY A 177 1 7 HELIX 14 14 GLY A 177 ALA A 191 1 15 HELIX 15 15 THR A 197 GLY A 213 1 17 HELIX 16 16 PHE A 214 TYR A 217 5 4 HELIX 17 17 SER A 218 ALA A 238 1 21 HELIX 18 18 MET B 3 SER B 7 5 5 HELIX 19 19 ASP B 9 SER B 14 1 6 HELIX 20 20 PRO B 15 LEU B 17 5 3 HELIX 21 21 SER B 18 ALA B 37 1 20 HELIX 22 22 ASP B 40 ARG B 50 1 11 HELIX 23 23 THR B 53 LYS B 59 1 7 HELIX 24 24 HIS B 62 LEU B 73 1 12 HELIX 25 25 LYS B 74 TYR B 79 5 6 HELIX 26 26 SER B 96 GLY B 108 1 13 HELIX 27 27 GLY B 127 ALA B 141 1 15 HELIX 28 28 SER B 143 SER B 152 1 10 HELIX 29 29 ASN B 154 CYS B 164 1 11 HELIX 30 30 GLU B 165 ASP B 170 5 6 HELIX 31 31 GLY B 171 PHE B 192 1 22 HELIX 32 32 THR B 197 ALA B 212 1 16 HELIX 33 33 PHE B 214 TYR B 217 5 4 HELIX 34 34 SER B 218 LEU B 240 1 23 SHEET 1 A 2 LEU A 112 PHE A 113 0 SHEET 2 A 2 LYS A 125 LYS A 126 -1 O LYS A 125 N PHE A 113 SHEET 1 B 2 LEU B 112 THR B 116 0 SHEET 2 B 2 ARG B 122 LYS B 126 -1 O GLU B 123 N THR B 115 SITE 1 AC1 1 ALA B 183 SITE 1 AC2 1 GLU A 145 SITE 1 AC3 1 ALA B 173 SITE 1 AC4 2 ASP A 38 GLU A 165 SITE 1 AC5 1 ASN B 224 SITE 1 AC6 2 LYS B 74 THR B 116 SITE 1 AC7 1 ASP B 170 CRYST1 55.180 89.851 103.007 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018123 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011130 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009708 0.00000