HEADER TRANSFERASE 15-JUN-11 3SGV TITLE CRYSTAL STRUCTURE OF E. COLI UNDECAPRENYL PYROPHOSPHATE SYNTHASE IN TITLE 2 COMPLEX WITH BPH-1290 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNDECAPRENYL PYROPHOSPHATE SYNTHASE; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: UPP SYNTHASE, DI-TRANS,POLY-CIS-DECAPRENYLCISTRANSFERASE, COMPND 5 UNDECAPRENYL DIPHOSPHATE SYNTHASE, UDS; COMPND 6 EC: 2.5.1.31; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B0174, ISPU, JW0169, RTH, UPPS, YAES; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA/BETA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.CAO,Y.-L.LIU,E.OLDFIELD REVDAT 3 28-FEB-24 3SGV 1 REMARK REVDAT 2 16-JAN-13 3SGV 1 JRNL REVDAT 1 19-DEC-12 3SGV 0 JRNL AUTH W.ZHU,Y.ZHANG,W.SINKO,M.E.HENSLER,J.OLSON,K.J.MOLOHON, JRNL AUTH 2 S.LINDERT,R.CAO,K.LI,K.WANG,Y.WANG,Y.L.LIU,A.SANKOVSKY, JRNL AUTH 3 C.A.DE OLIVEIRA,D.A.MITCHELL,V.NIZET,J.A.MCCAMMON,E.OLDFIELD JRNL TITL ANTIBACTERIAL DRUG LEADS TARGETING ISOPRENOID BIOSYNTHESIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 123 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23248302 JRNL DOI 10.1073/PNAS.1219899110 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 62528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3146 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3618 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 195 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3487 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 135 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.147 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3744 ; 0.026 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5075 ; 2.249 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 450 ; 5.989 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 192 ;36.601 ;23.542 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 613 ;14.725 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;19.602 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 524 ; 0.176 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2967 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2187 ; 1.429 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3485 ; 2.370 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1557 ; 3.807 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1583 ; 5.939 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1140 2.6970 18.0350 REMARK 3 T TENSOR REMARK 3 T11: 0.0502 T22: 0.0899 REMARK 3 T33: 0.0820 T12: -0.0121 REMARK 3 T13: 0.0188 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 3.3340 L22: 2.1493 REMARK 3 L33: 2.3685 L12: -1.2483 REMARK 3 L13: 0.0190 L23: 0.0685 REMARK 3 S TENSOR REMARK 3 S11: -0.0161 S12: 0.1262 S13: -0.1514 REMARK 3 S21: -0.1338 S22: 0.0089 S23: -0.1209 REMARK 3 S31: 0.0837 S32: 0.1874 S33: 0.0072 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 61 REMARK 3 ORIGIN FOR THE GROUP (A): 28.4520 5.6580 22.4240 REMARK 3 T TENSOR REMARK 3 T11: 0.0307 T22: 0.1361 REMARK 3 T33: 0.1090 T12: -0.0091 REMARK 3 T13: -0.0013 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 3.8816 L22: 10.2461 REMARK 3 L33: 1.6392 L12: -4.3677 REMARK 3 L13: -0.3872 L23: -0.7284 REMARK 3 S TENSOR REMARK 3 S11: -0.0262 S12: 0.0017 S13: 0.0501 REMARK 3 S21: 0.0122 S22: 0.0013 S23: -0.5655 REMARK 3 S31: 0.0124 S32: 0.3823 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 62 A 92 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5790 -1.5550 31.0870 REMARK 3 T TENSOR REMARK 3 T11: 0.1566 T22: 0.1069 REMARK 3 T33: 0.1293 T12: 0.0175 REMARK 3 T13: -0.0149 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.9514 L22: 2.8835 REMARK 3 L33: 2.8146 L12: -0.1314 REMARK 3 L13: 0.5429 L23: 0.2148 REMARK 3 S TENSOR REMARK 3 S11: 0.0961 S12: -0.1023 S13: -0.1984 REMARK 3 S21: 0.2442 S22: 0.0137 S23: -0.2517 REMARK 3 S31: 0.5584 S32: 0.1936 S33: -0.1097 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 22.6110 16.2300 34.2460 REMARK 3 T TENSOR REMARK 3 T11: 0.0608 T22: 0.1034 REMARK 3 T33: 0.1226 T12: -0.0251 REMARK 3 T13: -0.0061 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 2.9077 L22: 7.2837 REMARK 3 L33: 1.7135 L12: -1.2212 REMARK 3 L13: 0.7080 L23: -1.5610 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.1579 S13: 0.1800 REMARK 3 S21: 0.1142 S22: -0.0450 S23: -0.6149 REMARK 3 S31: -0.0195 S32: 0.2480 S33: 0.0770 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2620 2.0750 39.1600 REMARK 3 T TENSOR REMARK 3 T11: 0.1250 T22: 0.1749 REMARK 3 T33: 0.1038 T12: -0.0526 REMARK 3 T13: -0.0021 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 3.5558 L22: 0.0956 REMARK 3 L33: 6.8099 L12: 0.4153 REMARK 3 L13: 4.0294 L23: -0.1253 REMARK 3 S TENSOR REMARK 3 S11: 0.3325 S12: -0.4355 S13: -0.3134 REMARK 3 S21: 0.0122 S22: 0.0266 S23: -0.0323 REMARK 3 S31: 0.4742 S32: -0.5592 S33: -0.3591 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1360 11.0950 41.7840 REMARK 3 T TENSOR REMARK 3 T11: 0.1476 T22: 0.1623 REMARK 3 T33: 0.0821 T12: 0.0043 REMARK 3 T13: -0.0154 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 1.6714 L22: 7.9594 REMARK 3 L33: 3.2880 L12: -2.1209 REMARK 3 L13: 0.6644 L23: -3.6730 REMARK 3 S TENSOR REMARK 3 S11: -0.1349 S12: -0.3513 S13: -0.0544 REMARK 3 S21: 0.6034 S22: 0.1936 S23: -0.0277 REMARK 3 S31: -0.1710 S32: -0.1815 S33: -0.0586 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2320 6.3750 29.9390 REMARK 3 T TENSOR REMARK 3 T11: 0.0515 T22: 0.0944 REMARK 3 T33: 0.0456 T12: -0.0202 REMARK 3 T13: 0.0162 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 1.2080 L22: 1.7182 REMARK 3 L33: 0.8176 L12: 1.2226 REMARK 3 L13: 0.4745 L23: 0.4803 REMARK 3 S TENSOR REMARK 3 S11: 0.0821 S12: -0.0836 S13: 0.0498 REMARK 3 S21: 0.1434 S22: -0.0991 S23: 0.0436 REMARK 3 S31: 0.0444 S32: -0.2075 S33: 0.0170 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2020 7.1830 33.5640 REMARK 3 T TENSOR REMARK 3 T11: 0.1448 T22: 0.1453 REMARK 3 T33: 0.1820 T12: -0.0169 REMARK 3 T13: 0.1316 T23: -0.1091 REMARK 3 L TENSOR REMARK 3 L11: 4.7189 L22: 4.7681 REMARK 3 L33: 4.5428 L12: 0.6067 REMARK 3 L13: -2.4765 L23: -1.1652 REMARK 3 S TENSOR REMARK 3 S11: 0.2693 S12: -0.3984 S13: 0.5050 REMARK 3 S21: 0.5566 S22: -0.0184 S23: 0.3960 REMARK 3 S31: -0.4719 S32: -0.1211 S33: -0.2509 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 180 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0340 6.1550 18.8980 REMARK 3 T TENSOR REMARK 3 T11: 0.0519 T22: 0.0697 REMARK 3 T33: 0.0637 T12: -0.0060 REMARK 3 T13: 0.0134 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 1.2312 L22: 1.3315 REMARK 3 L33: 1.1437 L12: 0.5787 REMARK 3 L13: 0.3467 L23: 0.3314 REMARK 3 S TENSOR REMARK 3 S11: -0.0281 S12: -0.0392 S13: 0.0619 REMARK 3 S21: 0.0316 S22: -0.0106 S23: 0.1187 REMARK 3 S31: -0.0247 S32: -0.0496 S33: 0.0387 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 216 A 238 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1860 9.0280 11.7050 REMARK 3 T TENSOR REMARK 3 T11: 0.1081 T22: 0.1155 REMARK 3 T33: 0.0519 T12: -0.0375 REMARK 3 T13: 0.0421 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 2.4292 L22: 3.9782 REMARK 3 L33: 1.7815 L12: -0.7107 REMARK 3 L13: 0.6562 L23: 1.1047 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: 0.3242 S13: 0.1457 REMARK 3 S21: -0.4828 S22: 0.0106 S23: -0.1665 REMARK 3 S31: -0.3416 S32: 0.1954 S33: 0.0068 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 27 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9710 -9.6070 5.4210 REMARK 3 T TENSOR REMARK 3 T11: 0.0859 T22: 0.0796 REMARK 3 T33: 0.0790 T12: -0.0029 REMARK 3 T13: 0.0123 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.7838 L22: 1.7909 REMARK 3 L33: 2.1599 L12: 0.4186 REMARK 3 L13: -0.4028 L23: 0.0837 REMARK 3 S TENSOR REMARK 3 S11: -0.0861 S12: 0.0029 S13: -0.2368 REMARK 3 S21: 0.0797 S22: 0.0039 S23: -0.0062 REMARK 3 S31: 0.2475 S32: 0.1512 S33: 0.0822 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 46 REMARK 3 ORIGIN FOR THE GROUP (A): -5.2350 8.9220 -9.8010 REMARK 3 T TENSOR REMARK 3 T11: 0.0910 T22: 0.1169 REMARK 3 T33: 0.0634 T12: 0.0022 REMARK 3 T13: -0.0298 T23: 0.0453 REMARK 3 L TENSOR REMARK 3 L11: 5.0717 L22: 9.5966 REMARK 3 L33: 4.0236 L12: 1.6391 REMARK 3 L13: -0.5438 L23: -4.0857 REMARK 3 S TENSOR REMARK 3 S11: -0.0088 S12: 0.3592 S13: 0.3746 REMARK 3 S21: -0.0608 S22: 0.0589 S23: 0.2153 REMARK 3 S31: -0.1759 S32: -0.0640 S33: -0.0501 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 47 B 88 REMARK 3 ORIGIN FOR THE GROUP (A): -7.3730 -5.4520 -0.7370 REMARK 3 T TENSOR REMARK 3 T11: 0.0428 T22: 0.0699 REMARK 3 T33: 0.0810 T12: -0.0350 REMARK 3 T13: -0.0127 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 1.6384 L22: 2.4455 REMARK 3 L33: 3.2453 L12: 0.1553 REMARK 3 L13: -0.2860 L23: -0.5944 REMARK 3 S TENSOR REMARK 3 S11: -0.0335 S12: 0.0940 S13: 0.1124 REMARK 3 S21: -0.1064 S22: 0.0510 S23: 0.1351 REMARK 3 S31: 0.0464 S32: -0.1533 S33: -0.0175 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 89 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): -17.9450 -8.6010 -1.1710 REMARK 3 T TENSOR REMARK 3 T11: 0.0995 T22: 0.1369 REMARK 3 T33: 0.1707 T12: -0.0458 REMARK 3 T13: -0.0315 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 4.1605 L22: 3.9654 REMARK 3 L33: 2.2910 L12: 0.4406 REMARK 3 L13: -0.4314 L23: -1.2041 REMARK 3 S TENSOR REMARK 3 S11: 0.0135 S12: 0.2531 S13: 0.4286 REMARK 3 S21: -0.3030 S22: 0.1402 S23: 0.4810 REMARK 3 S31: -0.0679 S32: -0.3817 S33: -0.1537 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 108 B 123 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9220 0.8540 9.6160 REMARK 3 T TENSOR REMARK 3 T11: 0.0651 T22: 0.2972 REMARK 3 T33: 0.3157 T12: 0.0569 REMARK 3 T13: 0.0487 T23: -0.0686 REMARK 3 L TENSOR REMARK 3 L11: 11.9782 L22: 6.3968 REMARK 3 L33: 5.2551 L12: -0.5380 REMARK 3 L13: 1.8258 L23: 1.0394 REMARK 3 S TENSOR REMARK 3 S11: -0.0495 S12: -0.3742 S13: 0.8732 REMARK 3 S21: 0.1242 S22: -0.1713 S23: 0.9155 REMARK 3 S31: -0.3322 S32: -1.0303 S33: 0.2208 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 124 B 142 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9270 -10.6320 6.2720 REMARK 3 T TENSOR REMARK 3 T11: 0.0625 T22: 0.1477 REMARK 3 T33: 0.0910 T12: -0.0605 REMARK 3 T13: 0.0083 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 3.3101 L22: 3.9045 REMARK 3 L33: 3.3344 L12: 1.1665 REMARK 3 L13: -0.6748 L23: 0.5408 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: -0.0860 S13: 0.0620 REMARK 3 S21: 0.2016 S22: -0.0491 S23: 0.3475 REMARK 3 S31: 0.1378 S32: -0.5545 S33: 0.0375 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 143 B 167 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4950 0.1260 25.7800 REMARK 3 T TENSOR REMARK 3 T11: 0.0864 T22: 0.1534 REMARK 3 T33: 0.1783 T12: -0.0408 REMARK 3 T13: 0.0869 T23: -0.0566 REMARK 3 L TENSOR REMARK 3 L11: 0.7900 L22: 2.1935 REMARK 3 L33: 2.4915 L12: -0.4832 REMARK 3 L13: -0.5102 L23: -1.1845 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: -0.0775 S13: -0.0069 REMARK 3 S21: 0.2110 S22: 0.0524 S23: 0.4424 REMARK 3 S31: 0.0278 S32: -0.2386 S33: -0.0690 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 168 B 180 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9720 -6.9900 31.5730 REMARK 3 T TENSOR REMARK 3 T11: 0.1568 T22: 0.2224 REMARK 3 T33: 0.0925 T12: -0.0208 REMARK 3 T13: 0.0452 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 6.6754 L22: 3.6707 REMARK 3 L33: 2.7312 L12: 0.5167 REMARK 3 L13: -4.2400 L23: -1.3644 REMARK 3 S TENSOR REMARK 3 S11: -0.1031 S12: -0.5930 S13: -0.1657 REMARK 3 S21: 0.1483 S22: 0.0618 S23: 0.1623 REMARK 3 S31: 0.0560 S32: 0.3655 S33: 0.0413 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 181 B 224 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3600 -1.7810 8.4520 REMARK 3 T TENSOR REMARK 3 T11: 0.0421 T22: 0.0481 REMARK 3 T33: 0.0469 T12: -0.0079 REMARK 3 T13: 0.0084 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.7558 L22: 0.5041 REMARK 3 L33: 1.6901 L12: 0.1996 REMARK 3 L13: 0.1948 L23: 0.2163 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: -0.0240 S13: 0.0479 REMARK 3 S21: 0.0066 S22: -0.0166 S23: 0.0723 REMARK 3 S31: -0.0152 S32: 0.1026 S33: 0.0215 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 225 B 240 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8880 -10.3420 0.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.0766 T22: 0.0935 REMARK 3 T33: 0.0680 T12: 0.0328 REMARK 3 T13: 0.0174 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 3.9270 L22: 3.0379 REMARK 3 L33: 6.3662 L12: -0.7633 REMARK 3 L13: 3.5622 L23: -0.5039 REMARK 3 S TENSOR REMARK 3 S11: 0.0732 S12: 0.1976 S13: -0.1654 REMARK 3 S21: 0.0787 S22: 0.0393 S23: -0.1947 REMARK 3 S31: 0.3052 S32: 0.4821 S33: -0.1125 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3SGV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066185. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62778 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 15.20 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.70400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM HEPES, PH 7.5, 5% PEG 4,000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.56950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.28050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.50200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.28050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.56950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.50200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 MET B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 THR B 6 REMARK 465 GLN B 7 REMARK 465 PRO B 8 REMARK 465 LEU B 9 REMARK 465 SER B 10 REMARK 465 GLU B 11 REMARK 465 LYS B 12 REMARK 465 SER B 71 REMARK 465 SER B 72 REMARK 465 GLU B 73 REMARK 465 ASN B 74 REMARK 465 TRP B 75 REMARK 465 ASN B 76 REMARK 465 ARG B 77 REMARK 465 PRO B 78 REMARK 465 ALA B 79 REMARK 465 GLN B 80 REMARK 465 GLU B 81 REMARK 465 ARG B 241 REMARK 465 ARG B 242 REMARK 465 PHE B 243 REMARK 465 GLY B 244 REMARK 465 GLY B 245 REMARK 465 THR B 246 REMARK 465 GLU B 247 REMARK 465 PRO B 248 REMARK 465 GLY B 249 REMARK 465 ASP B 250 REMARK 465 GLU B 251 REMARK 465 THR B 252 REMARK 465 ALA B 253 REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 THR A 6 REMARK 465 GLN A 7 REMARK 465 PRO A 8 REMARK 465 LEU A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 LYS A 12 REMARK 465 LEU A 13 REMARK 465 PRO A 14 REMARK 465 ALA A 15 REMARK 465 HIS A 16 REMARK 465 ARG A 239 REMARK 465 GLU A 240 REMARK 465 ARG A 241 REMARK 465 ARG A 242 REMARK 465 PHE A 243 REMARK 465 GLY A 244 REMARK 465 GLY A 245 REMARK 465 THR A 246 REMARK 465 GLU A 247 REMARK 465 PRO A 248 REMARK 465 GLY A 249 REMARK 465 ASP A 250 REMARK 465 GLU A 251 REMARK 465 THR A 252 REMARK 465 ALA A 253 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 83 OG REMARK 470 GLU B 87 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 48 O4 2BJ B 5001 1.76 REMARK 500 NZ LYS B 48 C7 2BJ B 5001 1.99 REMARK 500 O TRP B 91 N LEU B 93 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 278 O HOH A 298 2554 1.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 18 CB CYS B 18 SG -0.101 REMARK 500 GLU B 174 CB GLU B 174 CG -0.131 REMARK 500 GLU B 174 CG GLU B 174 CD 0.093 REMARK 500 GLU A 175 CG GLU A 175 CD 0.098 REMARK 500 GLU A 185 CD GLU A 185 OE2 0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA B 69 N - CA - CB ANGL. DEV. = 9.3 DEGREES REMARK 500 ARG B 148 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ILE B 209 CG1 - CB - CG2 ANGL. DEV. = 14.0 DEGREES REMARK 500 PHE B 224 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG B 239 CG - CD - NE ANGL. DEV. = -16.0 DEGREES REMARK 500 ARG B 239 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 ARG B 239 NE - CZ - NH1 ANGL. DEV. = -9.7 DEGREES REMARK 500 ARG B 239 NE - CZ - NH2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG A 108 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ASP A 173 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 PHE A 204 CB - CG - CD2 ANGL. DEV. = -4.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 69 -43.01 -145.24 REMARK 500 TRP B 91 -119.50 -49.80 REMARK 500 ALA B 92 -36.52 -6.18 REMARK 500 HIS B 199 68.19 -116.77 REMARK 500 PHE B 204 -151.40 -74.72 REMARK 500 ASP B 225 -169.71 -116.37 REMARK 500 HIS A 199 61.04 -117.32 REMARK 500 PHE A 204 -148.33 -74.82 REMARK 500 LEU A 206 -62.37 -121.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR B 68 ALA B 69 140.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR B 68 -10.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 2BJ A 4001 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2BJ A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2BJ A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2BJ A 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2BJ B 5001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2BJ B 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SGX RELATED DB: PDB REMARK 900 RELATED ID: 3SH0 RELATED DB: PDB REMARK 900 RELATED ID: 3SGT RELATED DB: PDB DBREF 3SGV B 1 253 UNP P60472 UPPS_ECOLI 1 253 DBREF 3SGV A 1 253 UNP P60472 UPPS_ECOLI 1 253 SEQRES 1 B 253 MET MET LEU SER ALA THR GLN PRO LEU SER GLU LYS LEU SEQRES 2 B 253 PRO ALA HIS GLY CYS ARG HIS VAL ALA ILE ILE MET ASP SEQRES 3 B 253 GLY ASN GLY ARG TRP ALA LYS LYS GLN GLY LYS ILE ARG SEQRES 4 B 253 ALA PHE GLY HIS LYS ALA GLY ALA LYS SER VAL ARG ARG SEQRES 5 B 253 ALA VAL SER PHE ALA ALA ASN ASN GLY ILE GLU ALA LEU SEQRES 6 B 253 THR LEU TYR ALA PHE SER SER GLU ASN TRP ASN ARG PRO SEQRES 7 B 253 ALA GLN GLU VAL SER ALA LEU MET GLU LEU PHE VAL TRP SEQRES 8 B 253 ALA LEU ASP SER GLU VAL LYS SER LEU HIS ARG HIS ASN SEQRES 9 B 253 VAL ARG LEU ARG ILE ILE GLY ASP THR SER ARG PHE ASN SEQRES 10 B 253 SER ARG LEU GLN GLU ARG ILE ARG LYS SER GLU ALA LEU SEQRES 11 B 253 THR ALA GLY ASN THR GLY LEU THR LEU ASN ILE ALA ALA SEQRES 12 B 253 ASN TYR GLY GLY ARG TRP ASP ILE VAL GLN GLY VAL ARG SEQRES 13 B 253 GLN LEU ALA GLU LYS VAL GLN GLN GLY ASN LEU GLN PRO SEQRES 14 B 253 ASP GLN ILE ASP GLU GLU MET LEU ASN GLN HIS VAL CYS SEQRES 15 B 253 MET HIS GLU LEU ALA PRO VAL ASP LEU VAL ILE ARG THR SEQRES 16 B 253 GLY GLY GLU HIS ARG ILE SER ASN PHE LEU LEU TRP GLN SEQRES 17 B 253 ILE ALA TYR ALA GLU LEU TYR PHE THR ASP VAL LEU TRP SEQRES 18 B 253 PRO ASP PHE ASP GLU GLN ASP PHE GLU GLY ALA LEU ASN SEQRES 19 B 253 ALA PHE ALA ASN ARG GLU ARG ARG PHE GLY GLY THR GLU SEQRES 20 B 253 PRO GLY ASP GLU THR ALA SEQRES 1 A 253 MET MET LEU SER ALA THR GLN PRO LEU SER GLU LYS LEU SEQRES 2 A 253 PRO ALA HIS GLY CYS ARG HIS VAL ALA ILE ILE MET ASP SEQRES 3 A 253 GLY ASN GLY ARG TRP ALA LYS LYS GLN GLY LYS ILE ARG SEQRES 4 A 253 ALA PHE GLY HIS LYS ALA GLY ALA LYS SER VAL ARG ARG SEQRES 5 A 253 ALA VAL SER PHE ALA ALA ASN ASN GLY ILE GLU ALA LEU SEQRES 6 A 253 THR LEU TYR ALA PHE SER SER GLU ASN TRP ASN ARG PRO SEQRES 7 A 253 ALA GLN GLU VAL SER ALA LEU MET GLU LEU PHE VAL TRP SEQRES 8 A 253 ALA LEU ASP SER GLU VAL LYS SER LEU HIS ARG HIS ASN SEQRES 9 A 253 VAL ARG LEU ARG ILE ILE GLY ASP THR SER ARG PHE ASN SEQRES 10 A 253 SER ARG LEU GLN GLU ARG ILE ARG LYS SER GLU ALA LEU SEQRES 11 A 253 THR ALA GLY ASN THR GLY LEU THR LEU ASN ILE ALA ALA SEQRES 12 A 253 ASN TYR GLY GLY ARG TRP ASP ILE VAL GLN GLY VAL ARG SEQRES 13 A 253 GLN LEU ALA GLU LYS VAL GLN GLN GLY ASN LEU GLN PRO SEQRES 14 A 253 ASP GLN ILE ASP GLU GLU MET LEU ASN GLN HIS VAL CYS SEQRES 15 A 253 MET HIS GLU LEU ALA PRO VAL ASP LEU VAL ILE ARG THR SEQRES 16 A 253 GLY GLY GLU HIS ARG ILE SER ASN PHE LEU LEU TRP GLN SEQRES 17 A 253 ILE ALA TYR ALA GLU LEU TYR PHE THR ASP VAL LEU TRP SEQRES 18 A 253 PRO ASP PHE ASP GLU GLN ASP PHE GLU GLY ALA LEU ASN SEQRES 19 A 253 ALA PHE ALA ASN ARG GLU ARG ARG PHE GLY GLY THR GLU SEQRES 20 A 253 PRO GLY ASP GLU THR ALA HET 2BJ B5001 30 HET 2BJ B1001 30 HET 2BJ A2001 30 HET 2BJ A3001 30 HET 2BJ A4001 15 HETNAM 2BJ 2-{[3-(3,4-DIMETHYLPHENOXY)PHENYL]CARBAMOYL}-4- HETNAM 2 2BJ NITROBENZOIC ACID FORMUL 3 2BJ 5(C22 H18 N2 O6) FORMUL 8 HOH *350(H2 O) HELIX 1 1 GLY B 27 GLN B 35 1 9 HELIX 2 2 ILE B 38 ASN B 60 1 23 HELIX 3 3 VAL B 82 TRP B 91 1 10 HELIX 4 4 ALA B 92 HIS B 103 1 12 HELIX 5 5 ASP B 112 PHE B 116 5 5 HELIX 6 6 ASN B 117 ALA B 132 1 16 HELIX 7 7 GLY B 146 GLY B 165 1 20 HELIX 8 8 GLN B 168 ILE B 172 5 5 HELIX 9 9 ASP B 173 GLN B 179 1 7 HELIX 10 10 LEU B 206 ALA B 210 5 5 HELIX 11 11 LEU B 220 PHE B 224 5 5 HELIX 12 12 ASP B 225 GLU B 240 1 16 HELIX 13 13 GLY A 27 GLN A 35 1 9 HELIX 14 14 ILE A 38 ASN A 60 1 23 HELIX 15 15 SER A 71 ASN A 76 1 6 HELIX 16 16 PRO A 78 HIS A 103 1 26 HELIX 17 17 ASP A 112 PHE A 116 5 5 HELIX 18 18 ASN A 117 ALA A 132 1 16 HELIX 19 19 GLY A 146 GLN A 164 1 19 HELIX 20 20 GLN A 168 ILE A 172 5 5 HELIX 21 21 ASP A 173 GLN A 179 1 7 HELIX 22 22 LEU A 206 ALA A 210 5 5 HELIX 23 23 LEU A 220 PHE A 224 5 5 HELIX 24 24 ASP A 225 ASN A 238 1 14 SHEET 1 A 6 ARG B 106 ILE B 110 0 SHEET 2 A 6 THR B 138 ALA B 142 1 O LEU B 139 N ARG B 106 SHEET 3 A 6 ALA B 64 TYR B 68 1 N LEU B 67 O ALA B 142 SHEET 4 A 6 HIS B 20 MET B 25 1 N ILE B 23 O TYR B 68 SHEET 5 A 6 LEU B 191 THR B 195 1 O ILE B 193 N ILE B 24 SHEET 6 A 6 GLU B 213 PHE B 216 1 O TYR B 215 N VAL B 192 SHEET 1 B 6 ARG A 106 ILE A 110 0 SHEET 2 B 6 THR A 138 ALA A 142 1 O LEU A 139 N ARG A 106 SHEET 3 B 6 ALA A 64 TYR A 68 1 N LEU A 65 O ASN A 140 SHEET 4 B 6 HIS A 20 ILE A 24 1 N ILE A 23 O TYR A 68 SHEET 5 B 6 LEU A 191 ARG A 194 1 O ILE A 193 N ILE A 24 SHEET 6 B 6 GLU A 213 PHE A 216 1 O TYR A 215 N VAL A 192 SITE 1 AC1 19 ILE A 24 MET A 25 ASP A 26 GLY A 27 SITE 2 AC1 19 ASN A 28 GLY A 29 ARG A 39 HIS A 43 SITE 3 AC1 19 TYR A 68 ALA A 69 PHE A 70 SER A 71 SITE 4 AC1 19 GLU A 73 ASN A 74 ARG A 194 HOH A 286 SITE 5 AC1 19 HOH A 342 2BJ A3001 2BJ A4001 SITE 1 AC2 18 MET A 25 LEU A 67 ALA A 69 PHE A 70 SITE 2 AC2 18 TRP A 75 MET A 86 PHE A 89 GLU A 96 SITE 3 AC2 18 PHE A 116 ILE A 141 ALA A 142 ALA A 143 SITE 4 AC2 18 ASN A 144 HOH A 266 HOH A 274 HOH A 368 SITE 5 AC2 18 2BJ A2001 2BJ A4001 SITE 1 AC3 4 HIS A 43 TRP A 75 2BJ A2001 2BJ A3001 SITE 1 AC4 14 GLN A 163 HIS B 43 LYS B 44 ALA B 47 SITE 2 AC4 14 LYS B 48 VAL B 50 ARG B 51 LEU B 88 SITE 3 AC4 14 ALA B 92 GLU B 96 GLN B 168 HOH B 268 SITE 4 AC4 14 HOH B 371 2BJ B1001 SITE 1 AC5 13 MET B 25 ASP B 26 GLY B 27 ASN B 28 SITE 2 AC5 13 GLY B 29 HIS B 43 VAL B 50 ALA B 69 SITE 3 AC5 13 LEU B 85 PHE B 89 HOH B 284 HOH B 340 SITE 4 AC5 13 2BJ B5001 CRYST1 63.139 69.004 112.561 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015838 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008884 0.00000