HEADER ISOMERASE/ISOMERASE INHIBITOR 15-JUN-11 3SGW TITLE CRYSTAL STRUCTURE OF RIBOSE-5-PHOSPHATE ISOMERASE B RPIB FROM TITLE 2 COCCIDIOIDES IMMITIS SEMI-COVALENTLY BOUND TO MALONIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSE 5-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COCCIDIOIDES IMMITIS; SOURCE 3 ORGANISM_COMMON: VALLEY FEVER FUNGUS; SOURCE 4 ORGANISM_TAXID: 246410; SOURCE 5 STRAIN: RS; SOURCE 6 GENE: CIMG_07932; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PAVA0421 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, SSGCID, VALLEY FEVER, COCCIDIOIDOMYCOSIS KEYWDS 3 IMMITIS, PATHOGENIC FUNGUS, RPIB, DUST-BORNE PATHOGEN, IODOACETIC KEYWDS 4 ACID, COVALENT INHIBITOR, RIBULOSE-5-PHOSPHATE, RIBOSE-5-PHOSPHATE, KEYWDS 5 ISOMERASE, ISOMERASE-ISOMERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 13-SEP-23 3SGW 1 REMARK SEQADV LINK REVDAT 3 29-APR-15 3SGW 1 HETSYN REVDAT 2 26-OCT-11 3SGW 1 JRNL VERSN REVDAT 1 29-JUN-11 3SGW 0 JRNL AUTH T.E.EDWARDS,A.B.ABRAMOV,E.R.SMITH,R.O.BAYDO,J.T.LEONARD, JRNL AUTH 2 D.J.LEIBLY,K.B.THOMPKINS,M.C.CLIFTON,A.S.GARDBERG, JRNL AUTH 3 B.L.STAKER,W.C.VAN VOORHIS,P.J.MYLER,L.J.STEWART JRNL TITL STRUCTURAL CHARACTERIZATION OF A RIBOSE-5-PHOSPHATE JRNL TITL 2 ISOMERASE B FROM THE PATHOGENIC FUNGUS COCCIDIOIDES IMMITIS. JRNL REF BMC STRUCT.BIOL. V. 11 39 2011 JRNL REFN ESSN 1472-6807 JRNL PMID 21995815 JRNL DOI 10.1186/1472-6807-11-39 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 16509 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 832 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 968 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.1560 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.1890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1183 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : 0.68000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.092 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.235 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1240 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1683 ; 1.323 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 165 ; 5.100 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 48 ;36.788 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 209 ;10.199 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 6.074 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 202 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 917 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 797 ; 0.641 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1285 ; 1.119 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 443 ; 2.024 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 394 ; 3.535 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 43 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2517 9.3855 12.0686 REMARK 3 T TENSOR REMARK 3 T11: -0.0009 T22: 0.0293 REMARK 3 T33: 0.0501 T12: 0.0336 REMARK 3 T13: -0.0046 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.0962 L22: 2.8630 REMARK 3 L33: 1.0874 L12: 1.1510 REMARK 3 L13: -0.0283 L23: 0.4532 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: -0.0391 S13: -0.1466 REMARK 3 S21: 0.0141 S22: 0.0675 S23: -0.2126 REMARK 3 S31: 0.0748 S32: 0.2051 S33: -0.0538 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3015 17.5790 4.3904 REMARK 3 T TENSOR REMARK 3 T11: 0.0266 T22: 0.0197 REMARK 3 T33: 0.0152 T12: 0.0037 REMARK 3 T13: 0.0102 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.6714 L22: 0.6671 REMARK 3 L33: 0.6017 L12: 0.1969 REMARK 3 L13: 0.0526 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.0427 S13: -0.0174 REMARK 3 S21: -0.0392 S22: 0.0281 S23: -0.0273 REMARK 3 S31: -0.0162 S32: 0.0166 S33: -0.0363 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 21.7120 10.6651 15.2827 REMARK 3 T TENSOR REMARK 3 T11: 0.0361 T22: 0.0047 REMARK 3 T33: 0.0203 T12: 0.0034 REMARK 3 T13: -0.0004 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.4015 L22: 0.6029 REMARK 3 L33: 0.9976 L12: 0.0736 REMARK 3 L13: 0.3333 L23: 0.5660 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: 0.0038 S13: -0.0305 REMARK 3 S21: 0.0445 S22: 0.0157 S23: 0.0087 REMARK 3 S31: 0.0816 S32: -0.0068 S33: -0.0313 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8644 12.6784 -4.3764 REMARK 3 T TENSOR REMARK 3 T11: 0.0479 T22: 0.0485 REMARK 3 T33: 0.0475 T12: 0.0077 REMARK 3 T13: -0.0523 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 0.2639 L22: 1.3298 REMARK 3 L33: 2.8260 L12: 0.8747 REMARK 3 L13: -0.7872 L23: -1.6200 REMARK 3 S TENSOR REMARK 3 S11: 0.0440 S12: 0.1303 S13: -0.0855 REMARK 3 S21: -0.0744 S22: 0.0812 S23: 0.0716 REMARK 3 S31: 0.2082 S32: 0.0119 S33: -0.1252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3SGW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16561 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.25600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3SDW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN AT 66 MG/ML WITH 20 MM RIBOSE REMARK 280 -5-PHOSPHATE AND 12 MM MNCL2. RESERVOIR: 25% PEG 1500 AND 0.1 M REMARK 280 MIB (MALONIC ACID, IMIDAZOLE, BORIC ACID), WITH 25% ETHYLENE REMARK 280 GLYCOL AS CRYO-PROTECTION REAGENT, PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.21000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.08500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.21000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.08500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.21000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.08500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.21000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.08500 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 48.08500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 48.08500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 48.08500 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 48.08500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 42.21000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 42.21000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 42.21000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 38.73000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 42.21000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 38.73000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 42.21000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -143.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 42.21000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.08500 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 38.73000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 48.08500 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 38.73000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 42.21000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 167 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 186 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 317 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 32 CG OD1 OD2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 167 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 168 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QD5 RELATED DB: PDB REMARK 900 C. IMMITIS RPIB IODIDE PHASED REMARK 900 RELATED ID: 3SDW RELATED DB: PDB REMARK 900 C. IMMITIS RPIB PHOSPHATE BOUND REMARK 900 RELATED ID: 3S5P RELATED DB: PDB REMARK 900 GIARDIA LAMBLIA RPIB REMARK 900 RELATED ID: COIMA.00584.A RELATED DB: TARGETDB DBREF 3SGW A 1 163 UNP P0CL19 RPIB_COCIM 1 163 SEQADV 3SGW MET A -20 UNP P0CL19 INITIATING METHIONINE SEQADV 3SGW ALA A -19 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW HIS A -18 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW HIS A -17 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW HIS A -16 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW HIS A -15 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW HIS A -14 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW HIS A -13 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW MET A -12 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW GLY A -11 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW THR A -10 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW LEU A -9 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW GLU A -8 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW ALA A -7 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW GLN A -6 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW THR A -5 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW GLN A -4 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW GLY A -3 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW PRO A -2 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW GLY A -1 UNP P0CL19 EXPRESSION TAG SEQADV 3SGW SER A 0 UNP P0CL19 EXPRESSION TAG SEQRES 1 A 184 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 184 ALA GLN THR GLN GLY PRO GLY SER MET ALA ALA THR PRO SEQRES 3 A 184 LEU PRO PRO LEU ARG LEU ALA ILE ALA CYS ASP ASP ALA SEQRES 4 A 184 GLY VAL SER TYR LYS GLU ALA LEU LYS ALA HIS LEU SER SEQRES 5 A 184 ASP ASN PRO LEU VAL SER SER ILE THR ASP VAL GLY VAL SEQRES 6 A 184 THR SER THR THR ASP LYS THR ALA TYR PRO HIS VAL ALA SEQRES 7 A 184 ILE GLN ALA ALA GLN LEU ILE LYS ASP GLY LYS VAL ASP SEQRES 8 A 184 ARG ALA LEU MET ILE CYS GLY THR GLY LEU GLY VAL ALA SEQRES 9 A 184 ILE SER ALA ASN LYS VAL PRO GLY ILE ARG ALA VAL THR SEQRES 10 A 184 ALA HIS ASP THR PHE SER VAL GLU ARG ALA ILE LEU SER SEQRES 11 A 184 ASN ASP ALA GLN VAL LEU CYS PHE GLY GLN ARG VAL ILE SEQRES 12 A 184 GLY ILE GLU LEU ALA LYS ARG LEU ALA GLY GLU TRP LEU SEQRES 13 A 184 THR TYR ARG PHE ASP GLN LYS SER ALA SER ALA GLN LYS SEQRES 14 A 184 VAL GLN ALA ILE SER ASP TYR GLU LYS LYS PHE VAL GLU SEQRES 15 A 184 VAL ASN HET MLA A 164 7 HET EDO A 165 4 HET EDO A 166 8 HET CL A 167 1 HET CL A 168 1 HETNAM MLA MALONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MLA C3 H4 O4 FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *168(H2 O) HELIX 1 1 GLY A 19 SER A 31 1 13 HELIX 2 2 ALA A 52 ASP A 66 1 15 HELIX 3 3 GLY A 79 LYS A 88 1 10 HELIX 4 4 ASP A 99 SER A 109 1 11 HELIX 5 5 GLY A 123 LEU A 135 1 13 HELIX 6 6 SER A 143 LYS A 157 1 15 SHEET 1 A 5 VAL A 36 ASP A 41 0 SHEET 2 A 5 LEU A 9 CYS A 15 1 N LEU A 11 O SER A 38 SHEET 3 A 5 ARG A 71 CYS A 76 1 O ILE A 75 N ALA A 14 SHEET 4 A 5 VAL A 114 GLY A 118 1 O LEU A 115 N MET A 74 SHEET 5 A 5 ALA A 94 THR A 96 1 N VAL A 95 O CYS A 116 LINK SG CYS A 76 C2 MLA A 164 1555 1555 2.18 CISPEP 1 GLY A 43 VAL A 44 0 -3.79 SITE 1 AC1 14 ASP A 16 TYR A 53 CYS A 76 GLY A 77 SITE 2 AC1 14 THR A 78 GLY A 79 LEU A 80 GLY A 81 SITE 3 AC1 14 VAL A 82 ASN A 110 CL A 168 HOH A 308 SITE 4 AC1 14 HOH A 312 HOH A 313 SITE 1 AC2 5 ARG A 71 ASP A 111 ALA A 112 HOH A 183 SITE 2 AC2 5 HOH A 238 SITE 1 AC3 3 LYS A 88 PHE A 159 HOH A 199 SITE 1 AC4 2 ASP A 99 THR A 100 SITE 1 AC5 4 ARG A 120 MLA A 164 HOH A 311 HOH A 313 CRYST1 77.460 84.420 96.170 90.00 90.00 90.00 F 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010398 0.00000