HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 15-JUN-11 3SGY TITLE STAPHYLOCOCCUS AUREUS DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND TITLE 2 6-ETHYL-5-[(3S)-3-[3-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1- TITLE 3 YL]PYRIMIDINE-2,4-DIAMINE (UCP1006) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DHFR; COMPND 5 EC: 1.5.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: DFRA, DFRB, FOLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET41 KEYWDS OXIDOREDUCTASE, NADP, NADPH, ONE-CARBON METABOLISM, OXIDOREDUCTASE- KEYWDS 2 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.M.FREY,A.C.ANDERSON REVDAT 4 03-APR-24 3SGY 1 REMARK REVDAT 3 28-FEB-24 3SGY 1 REMARK SEQADV REVDAT 2 20-NOV-13 3SGY 1 FORMUL HET HETATM HETNAM REVDAT 2 2 1 HETSYN SITE REVDAT 1 07-MAR-12 3SGY 0 JRNL AUTH K.VISWANATHAN,K.M.FREY,E.W.SCOCCHERA,B.D.MARTIN, JRNL AUTH 2 P.W.SWAIN III,J.B.ALVERSON,N.D.PRIESTLEY,A.C.ANDERSON, JRNL AUTH 3 D.L.WRIGHT JRNL TITL TOWARD NEW THERAPEUTICS FOR SKIN AND SOFT TISSUE INFECTIONS: JRNL TITL 2 PROPARGYL-LINKED ANTIFOLATES ARE POTENT INHIBITORS OF MRSA JRNL TITL 3 AND STREPTOCOCCUS PYOGENES. JRNL REF PLOS ONE V. 7 29434 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 22347365 JRNL DOI 10.1371/JOURNAL.PONE.0029434 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 11379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 544 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 819 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.4820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2544 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 152 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 5.706 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.355 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.251 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.572 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2776 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3786 ; 1.246 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 312 ; 6.216 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;38.320 ;24.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 452 ;17.032 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.739 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 416 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2074 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1183 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1873 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 104 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.172 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.177 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1591 ; 0.497 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2564 ; 0.908 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1360 ; 1.088 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1222 ; 1.700 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 157 2 REMARK 3 1 B 1 B 157 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 628 ; 0.010 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 645 ; 0.330 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 628 ; 0.020 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 645 ; 0.190 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SGY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066188. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 77.2 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : DOUBLE SILICON(111) WITH REMARK 200 CRYOGENICALLY-COOLED FIRST REMARK 200 CRYSTAL AND SAGITTALLY-BENT REMARK 200 SECOND CRYSTAL HORIZONTALLY- REMARK 200 FOCUSING AT 3.3:1 DEMAGNIFICATION REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11379 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.598 REMARK 200 RESOLUTION RANGE LOW (A) : 42.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 31.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.29100 REMARK 200 R SYM FOR SHELL (I) : 0.29100 REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: COOT REMARK 200 STARTING MODEL: SA DHFR BOUND TO FOLATE AND NADPH (DALE ET AL. REMARK 200 1997) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % PEG 10000, 150 MM SODIUM ACETATE, REMARK 280 100 MM MES PH 6.5, 5 % BUTYRLACTONE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.75900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.51800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.63850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.39750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.87950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 158 REMARK 465 GLU A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 HIS A 167 REMARK 465 LEU B 158 REMARK 465 GLU B 159 REMARK 465 HIS B 160 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 HIS B 165 REMARK 465 HIS B 166 REMARK 465 HIS B 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 38 -159.99 -113.83 REMARK 500 ASN A 56 32.07 78.88 REMARK 500 ASN A 69 77.39 -159.60 REMARK 500 HIS B 38 -160.08 -114.58 REMARK 500 ASN B 56 31.24 77.80 REMARK 500 ASN B 69 78.33 -158.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 06W A 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 06W B 168 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F0S RELATED DB: PDB REMARK 900 RELATED ID: 3F0Q RELATED DB: PDB REMARK 900 RELATED ID: 3F0B RELATED DB: PDB REMARK 900 RELATED ID: 3SH2 RELATED DB: PDB DBREF 3SGY A 1 157 UNP P0A017 DYR_STAAU 2 158 DBREF 3SGY B 1 157 UNP P0A017 DYR_STAAU 2 158 SEQADV 3SGY LEU A 158 UNP P0A017 EXPRESSION TAG SEQADV 3SGY GLU A 159 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 160 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 161 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 162 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 163 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 164 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 165 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 166 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS A 167 UNP P0A017 EXPRESSION TAG SEQADV 3SGY LEU B 158 UNP P0A017 EXPRESSION TAG SEQADV 3SGY GLU B 159 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 160 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 161 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 162 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 163 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 164 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 165 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 166 UNP P0A017 EXPRESSION TAG SEQADV 3SGY HIS B 167 UNP P0A017 EXPRESSION TAG SEQRES 1 A 167 THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG VAL SEQRES 2 A 167 ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO ASN SEQRES 3 A 167 ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS THR SEQRES 4 A 167 LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY LYS SEQRES 5 A 167 PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER ASP SEQRES 6 A 167 THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SER SEQRES 7 A 167 ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE ILE SEQRES 8 A 167 PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP LYS SEQRES 9 A 167 VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS PHE SEQRES 10 A 167 ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU ASP SEQRES 11 A 167 TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP GLU SEQRES 12 A 167 LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE ARG SEQRES 13 A 167 LYS LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 167 THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG VAL SEQRES 2 B 167 ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO ASN SEQRES 3 B 167 ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS THR SEQRES 4 B 167 LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY LYS SEQRES 5 B 167 PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER ASP SEQRES 6 B 167 THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SER SEQRES 7 B 167 ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE ILE SEQRES 8 B 167 PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP LYS SEQRES 9 B 167 VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS PHE SEQRES 10 B 167 ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU ASP SEQRES 11 B 167 TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP GLU SEQRES 12 B 167 LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE ARG SEQRES 13 B 167 LYS LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS HET NDP A 207 48 HET 06W A 168 28 HET NDP B 207 48 HET 06W B 168 28 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM 06W 6-ETHYL-5-{(3S)-3-[3-METHOXY-5-(PYRIDIN-4-YL) HETNAM 2 06W PHENYL]BUT-1-YN-1-YL}PYRIMIDINE-2,4-DIAMINE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 06W 2(C22 H23 N5 O) FORMUL 7 HOH *4(H2 O) HELIX 1 1 LEU A 24 THR A 36 1 13 HELIX 2 2 ARG A 44 SER A 49 1 6 HELIX 3 3 SER A 78 LEU A 85 5 8 HELIX 4 4 GLY A 94 ILE A 102 1 9 HELIX 5 5 THR A 127 GLU A 129 5 3 HELIX 6 6 LEU B 24 THR B 36 1 13 HELIX 7 7 ARG B 44 SER B 49 1 6 HELIX 8 8 SER B 78 LEU B 85 5 8 HELIX 9 9 GLY B 94 ILE B 102 1 9 HELIX 10 10 THR B 127 GLU B 129 5 3 SHEET 1 A 8 VAL A 73 ILE A 76 0 SHEET 2 A 8 ARG A 58 LEU A 62 1 N ASN A 59 O ASP A 74 SHEET 3 A 8 THR A 39 GLY A 43 1 N LEU A 40 O ARG A 58 SHEET 4 A 8 VAL A 89 GLY A 93 1 O PHE A 92 N VAL A 41 SHEET 5 A 8 LEU A 2 HIS A 8 1 N SER A 3 O ILE A 91 SHEET 6 A 8 ASP A 107 ILE A 113 1 O THR A 111 N VAL A 6 SHEET 7 A 8 HIS A 149 ARG A 156 -1 O LEU A 152 N ILE A 110 SHEET 8 A 8 TRP A 131 GLU A 138 -1 N GLU A 132 O ILE A 155 SHEET 1 B 2 VAL A 13 GLY A 15 0 SHEET 2 B 2 THR A 121 PHE A 122 -1 O THR A 121 N ILE A 14 SHEET 1 C 8 VAL B 73 ILE B 76 0 SHEET 2 C 8 ARG B 58 LEU B 62 1 N ASN B 59 O ASP B 74 SHEET 3 C 8 THR B 39 GLY B 43 1 N LEU B 40 O ARG B 58 SHEET 4 C 8 VAL B 89 GLY B 93 1 O PHE B 92 N VAL B 41 SHEET 5 C 8 LEU B 2 HIS B 8 1 N SER B 3 O ILE B 91 SHEET 6 C 8 ASP B 107 ILE B 113 1 O THR B 111 N VAL B 6 SHEET 7 C 8 HIS B 149 ARG B 156 -1 O LEU B 152 N ILE B 110 SHEET 8 C 8 TRP B 131 GLU B 138 -1 N GLU B 132 O ILE B 155 SHEET 1 D 2 VAL B 13 GLY B 15 0 SHEET 2 D 2 THR B 121 PHE B 122 -1 O THR B 121 N ILE B 14 CISPEP 1 GLY A 93 GLY A 94 0 -0.83 CISPEP 2 GLY B 93 GLY B 94 0 -0.42 SITE 1 AC1 24 VAL A 6 ALA A 7 ILE A 14 ASN A 18 SITE 2 AC1 24 GLN A 19 LEU A 20 GLY A 43 ARG A 44 SITE 3 AC1 24 LYS A 45 THR A 46 LEU A 62 THR A 63 SITE 4 AC1 24 SER A 64 HIS A 77 ILE A 79 PHE A 92 SITE 5 AC1 24 GLY A 93 GLY A 94 GLN A 95 THR A 96 SITE 6 AC1 24 LEU A 97 GLU A 100 THR A 121 06W A 168 SITE 1 AC2 13 LEU A 5 VAL A 6 ALA A 7 ASP A 27 SITE 2 AC2 13 LEU A 28 VAL A 31 ILE A 50 LEU A 54 SITE 3 AC2 13 ASN A 59 PHE A 92 THR A 111 HOH A 169 SITE 4 AC2 13 NDP A 207 SITE 1 AC3 25 VAL B 6 ALA B 7 ILE B 14 GLY B 15 SITE 2 AC3 25 ASN B 18 GLN B 19 LEU B 20 GLY B 43 SITE 3 AC3 25 ARG B 44 LYS B 45 THR B 46 LEU B 62 SITE 4 AC3 25 THR B 63 SER B 64 HIS B 77 ILE B 79 SITE 5 AC3 25 PHE B 92 GLY B 93 GLY B 94 GLN B 95 SITE 6 AC3 25 THR B 96 LEU B 97 GLU B 100 THR B 121 SITE 7 AC3 25 06W B 168 SITE 1 AC4 14 LEU B 5 VAL B 6 ALA B 7 ASP B 27 SITE 2 AC4 14 LEU B 28 VAL B 31 MET B 42 ILE B 50 SITE 3 AC4 14 LEU B 54 ASN B 59 PHE B 92 THR B 111 SITE 4 AC4 14 HOH B 169 NDP B 207 CRYST1 78.826 78.826 107.277 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012686 0.007324 0.000000 0.00000 SCALE2 0.000000 0.014649 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009322 0.00000