HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 15-JUN-11 3SH2 TITLE STAPHYLOCOCCUS AUREUS DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND TITLE 2 6-ETHYL-5-(3-(4-METHOXYBIPHENYL-3-YL)PROP-1-YNYL)PYRIMIDINE-2,4- TITLE 3 DIAMINE (UCP120J) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DHFR; COMPND 5 EC: 1.5.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: DFRA, DFRB, FOLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET41 KEYWDS OXIDOREDUCTASE, NADP, NADPH, ONE-CARBON METABOLISM, OXIDOREDUCTASE- KEYWDS 2 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.M.FREY,A.C.ANDERSON REVDAT 4 03-APR-24 3SH2 1 REMARK REVDAT 3 28-FEB-24 3SH2 1 REMARK SEQADV REVDAT 2 20-NOV-13 3SH2 1 FORMUL HET HETATM HETNAM REVDAT 2 2 1 HETSYN SITE REVDAT 1 07-MAR-12 3SH2 0 JRNL AUTH K.VISWANATHAN,K.M.FREY,E.W.SCOCCHERA,B.D.MARTIN, JRNL AUTH 2 P.W.SWAIN III,J.B.ALVERSON,N.D.PRIESTLEY,A.C.ANDERSON, JRNL AUTH 3 D.L.WRIGHT JRNL TITL TOWARD NEW THERAPEUTICS FOR SKIN AND SOFT TISSUE INFECTIONS: JRNL TITL 2 PROPARGYL-LINKED ANTIFOLATES ARE POTENT INHIBITORS OF MRSA JRNL TITL 3 AND STREPTOCOCCUS PYOGENES. JRNL REF PLOS ONE V. 7 29434 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 22347365 JRNL DOI 10.1371/JOURNAL.PONE.0029434 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7931 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 418 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 614 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 32 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2544 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 150 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.432 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.326 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.034 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2774 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3782 ; 0.983 ; 2.016 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 312 ; 4.880 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;37.592 ;24.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 452 ;16.669 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.414 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 414 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2074 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1117 ; 0.155 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1840 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 100 ; 0.104 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.142 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.006 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1607 ; 0.223 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2564 ; 0.405 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1357 ; 0.252 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1218 ; 0.463 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 157 2 REMARK 3 1 B 1 B 157 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 628 ; 0.010 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 645 ; 0.320 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 628 ; 0.070 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 645 ; 0.100 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SH2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 77.2 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : DOUBLE SILICON(111) WITH REMARK 200 CRYOGENICALLY-COOLED FIRST REMARK 200 CRYSTAL AND SAGITTALLY-BENT REMARK 200 SECOND CRYSTAL HORIZONTALLY REMARK 200 FOCUSING AT 3.3:1 DEMAGNIFICATION REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7931 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.999 REMARK 200 RESOLUTION RANGE LOW (A) : 37.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : 0.17300 REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : 0.49000 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: COOT REMARK 200 STARTING MODEL: SA DHFR BOUND TO FOLATE AND NADPH (DALE ET AL. REMARK 200 1997) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % PEG 10000, 150 MM SODIUM ACETATE, REMARK 280 100 MM MES PH 6.5, 5 % BUTYRLACTONE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.41333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.82667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.62000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 86.03333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.20667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 158 REMARK 465 GLU A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 HIS A 167 REMARK 465 LEU B 158 REMARK 465 GLU B 159 REMARK 465 HIS B 160 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 HIS B 165 REMARK 465 HIS B 166 REMARK 465 HIS B 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 38 -156.21 -130.25 REMARK 500 GLN A 84 43.92 -91.35 REMARK 500 ASP A 142 -165.40 -124.15 REMARK 500 HIS B 38 -156.12 -130.52 REMARK 500 GLN B 84 42.88 -91.41 REMARK 500 ASP B 142 -164.88 -124.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5DR A 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5DR B 168 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F0S RELATED DB: PDB REMARK 900 RELATED ID: 3F0Q RELATED DB: PDB REMARK 900 RELATED ID: 3F0B RELATED DB: PDB REMARK 900 RELATED ID: 3SGY RELATED DB: PDB DBREF 3SH2 A 1 157 UNP P0A017 DYR_STAAU 2 158 DBREF 3SH2 B 1 157 UNP P0A017 DYR_STAAU 2 158 SEQADV 3SH2 LEU A 158 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 GLU A 159 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 160 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 161 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 162 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 163 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 164 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 165 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 166 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS A 167 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 LEU B 158 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 GLU B 159 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 160 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 161 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 162 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 163 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 164 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 165 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 166 UNP P0A017 EXPRESSION TAG SEQADV 3SH2 HIS B 167 UNP P0A017 EXPRESSION TAG SEQRES 1 A 167 THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG VAL SEQRES 2 A 167 ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO ASN SEQRES 3 A 167 ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS THR SEQRES 4 A 167 LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY LYS SEQRES 5 A 167 PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER ASP SEQRES 6 A 167 THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SER SEQRES 7 A 167 ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE ILE SEQRES 8 A 167 PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP LYS SEQRES 9 A 167 VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS PHE SEQRES 10 A 167 ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU ASP SEQRES 11 A 167 TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP GLU SEQRES 12 A 167 LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE ARG SEQRES 13 A 167 LYS LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 167 THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG VAL SEQRES 2 B 167 ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO ASN SEQRES 3 B 167 ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS THR SEQRES 4 B 167 LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY LYS SEQRES 5 B 167 PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER ASP SEQRES 6 B 167 THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SER SEQRES 7 B 167 ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE ILE SEQRES 8 B 167 PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP LYS SEQRES 9 B 167 VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS PHE SEQRES 10 B 167 ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU ASP SEQRES 11 B 167 TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP GLU SEQRES 12 B 167 LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE ARG SEQRES 13 B 167 LYS LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS HET NDP A 207 48 HET 5DR A 168 27 HET NDP B 207 48 HET 5DR B 168 27 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM 5DR 6-ETHYL-5-[3-(4-METHOXYBIPHENYL-3-YL)PROP-1-YN-1- HETNAM 2 5DR YL]PYRIMIDINE-2,4-DIAMINE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 5DR 2(C22 H22 N4 O) HELIX 1 1 LEU A 24 THR A 36 1 13 HELIX 2 2 ARG A 44 GLY A 51 1 8 HELIX 3 3 ILE A 79 LEU A 85 5 7 HELIX 4 4 GLY A 94 ILE A 102 1 9 HELIX 5 5 LEU B 24 THR B 36 1 13 HELIX 6 6 ARG B 44 GLY B 51 1 8 HELIX 7 7 SER B 78 LEU B 85 5 8 HELIX 8 8 GLY B 94 ILE B 102 1 9 SHEET 1 A 8 ASP A 74 ILE A 76 0 SHEET 2 A 8 ARG A 58 LEU A 62 1 N VAL A 61 O ASP A 74 SHEET 3 A 8 THR A 39 GLY A 43 1 N LEU A 40 O VAL A 60 SHEET 4 A 8 VAL A 89 GLY A 93 1 O GLY A 93 N GLY A 43 SHEET 5 A 8 LEU A 2 ASP A 9 1 N SER A 3 O ILE A 91 SHEET 6 A 8 ASP A 107 ILE A 113 1 O TYR A 109 N ILE A 4 SHEET 7 A 8 HIS A 149 ARG A 156 -1 O LEU A 152 N ILE A 110 SHEET 8 A 8 TRP A 131 GLU A 138 -1 N VAL A 137 O PHE A 151 SHEET 1 B 2 VAL A 13 GLY A 15 0 SHEET 2 B 2 THR A 121 PHE A 122 -1 O THR A 121 N ILE A 14 SHEET 1 C 8 ASP B 74 ILE B 76 0 SHEET 2 C 8 ARG B 58 LEU B 62 1 N VAL B 61 O ASP B 74 SHEET 3 C 8 THR B 39 GLY B 43 1 N LEU B 40 O VAL B 60 SHEET 4 C 8 VAL B 89 GLY B 93 1 O PHE B 92 N VAL B 41 SHEET 5 C 8 LEU B 2 ASP B 9 1 N SER B 3 O ILE B 91 SHEET 6 C 8 ASP B 107 ILE B 113 1 O TYR B 109 N ILE B 4 SHEET 7 C 8 HIS B 149 ARG B 156 -1 O LEU B 152 N ILE B 110 SHEET 8 C 8 TRP B 131 GLU B 138 -1 N VAL B 137 O PHE B 151 SHEET 1 D 2 VAL B 13 GLY B 15 0 SHEET 2 D 2 THR B 121 PHE B 122 -1 O THR B 121 N ILE B 14 CISPEP 1 GLY A 93 GLY A 94 0 0.01 CISPEP 2 GLY B 93 GLY B 94 0 0.24 SITE 1 AC1 23 VAL A 6 ALA A 7 ILE A 14 GLY A 15 SITE 2 AC1 23 ASN A 18 GLN A 19 LEU A 20 GLY A 43 SITE 3 AC1 23 ARG A 44 LYS A 45 THR A 46 LEU A 62 SITE 4 AC1 23 THR A 63 SER A 64 HIS A 77 PHE A 92 SITE 5 AC1 23 GLY A 94 GLN A 95 THR A 96 LEU A 97 SITE 6 AC1 23 GLU A 100 THR A 121 5DR A 168 SITE 1 AC2 23 VAL B 6 ALA B 7 ILE B 14 GLY B 15 SITE 2 AC2 23 ASN B 18 GLN B 19 LEU B 20 GLY B 43 SITE 3 AC2 23 ARG B 44 LYS B 45 THR B 46 LEU B 62 SITE 4 AC2 23 THR B 63 SER B 64 HIS B 77 PHE B 92 SITE 5 AC2 23 GLY B 94 GLN B 95 THR B 96 LEU B 97 SITE 6 AC2 23 GLU B 100 THR B 121 5DR B 168 SITE 1 AC3 12 LEU A 5 VAL A 6 ALA A 7 LEU A 20 SITE 2 AC3 12 ASP A 27 LEU A 28 VAL A 31 SER A 49 SITE 3 AC3 12 ILE A 50 PHE A 92 THR A 111 NDP A 207 SITE 1 AC4 10 LEU B 5 VAL B 6 ALA B 7 ASP B 27 SITE 2 AC4 10 LEU B 28 VAL B 31 ILE B 50 PHE B 92 SITE 3 AC4 10 THR B 111 NDP B 207 CRYST1 86.163 86.163 103.240 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011606 0.006701 0.000000 0.00000 SCALE2 0.000000 0.013401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009686 0.00000 CONECT 2547 2548 2549 2550 2569 CONECT 2548 2547 CONECT 2549 2547 CONECT 2550 2547 2551 CONECT 2551 2550 2552 CONECT 2552 2551 2553 2554 CONECT 2553 2552 2558 CONECT 2554 2552 2555 2556 CONECT 2555 2554 CONECT 2556 2554 2557 2558 CONECT 2557 2556 2591 CONECT 2558 2553 2556 2559 CONECT 2559 2558 2560 2568 CONECT 2560 2559 2561 CONECT 2561 2560 2562 CONECT 2562 2561 2563 2568 CONECT 2563 2562 2564 2565 CONECT 2564 2563 CONECT 2565 2563 2566 CONECT 2566 2565 2567 CONECT 2567 2566 2568 CONECT 2568 2559 2562 2567 CONECT 2569 2547 2570 CONECT 2570 2569 2571 2572 2573 CONECT 2571 2570 CONECT 2572 2570 CONECT 2573 2570 2574 CONECT 2574 2573 2575 CONECT 2575 2574 2576 2577 CONECT 2576 2575 2581 CONECT 2577 2575 2578 2579 CONECT 2578 2577 CONECT 2579 2577 2580 2581 CONECT 2580 2579 CONECT 2581 2576 2579 2582 CONECT 2582 2581 2583 2590 CONECT 2583 2582 2584 CONECT 2584 2583 2585 2588 CONECT 2585 2584 2586 2587 CONECT 2586 2585 CONECT 2587 2585 CONECT 2588 2584 2589 CONECT 2589 2588 2590 CONECT 2590 2582 2589 CONECT 2591 2557 2592 2593 2594 CONECT 2592 2591 CONECT 2593 2591 CONECT 2594 2591 CONECT 2595 2596 2600 CONECT 2596 2595 2597 2603 CONECT 2597 2596 2598 CONECT 2598 2597 2599 2615 CONECT 2599 2598 2600 2606 CONECT 2600 2595 2599 2604 CONECT 2601 2615 CONECT 2602 2617 CONECT 2603 2596 CONECT 2604 2600 CONECT 2605 2606 2616 CONECT 2606 2599 2605 CONECT 2607 2608 2609 CONECT 2608 2607 2610 CONECT 2609 2607 2611 CONECT 2610 2608 2618 CONECT 2611 2609 2618 CONECT 2612 2613 2619 CONECT 2613 2612 2621 CONECT 2614 2619 2620 CONECT 2615 2598 2601 CONECT 2616 2605 2620 CONECT 2617 2602 2621 CONECT 2618 2610 2611 2619 CONECT 2619 2612 2614 2618 CONECT 2620 2614 2616 2621 CONECT 2621 2613 2617 2620 CONECT 2622 2623 2624 2625 2644 CONECT 2623 2622 CONECT 2624 2622 CONECT 2625 2622 2626 CONECT 2626 2625 2627 CONECT 2627 2626 2628 2629 CONECT 2628 2627 2633 CONECT 2629 2627 2630 2631 CONECT 2630 2629 CONECT 2631 2629 2632 2633 CONECT 2632 2631 2666 CONECT 2633 2628 2631 2634 CONECT 2634 2633 2635 2643 CONECT 2635 2634 2636 CONECT 2636 2635 2637 CONECT 2637 2636 2638 2643 CONECT 2638 2637 2639 2640 CONECT 2639 2638 CONECT 2640 2638 2641 CONECT 2641 2640 2642 CONECT 2642 2641 2643 CONECT 2643 2634 2637 2642 CONECT 2644 2622 2645 CONECT 2645 2644 2646 2647 2648 CONECT 2646 2645 CONECT 2647 2645 CONECT 2648 2645 2649 CONECT 2649 2648 2650 CONECT 2650 2649 2651 2652 CONECT 2651 2650 2656 CONECT 2652 2650 2653 2654 CONECT 2653 2652 CONECT 2654 2652 2655 2656 CONECT 2655 2654 CONECT 2656 2651 2654 2657 CONECT 2657 2656 2658 2665 CONECT 2658 2657 2659 CONECT 2659 2658 2660 2663 CONECT 2660 2659 2661 2662 CONECT 2661 2660 CONECT 2662 2660 CONECT 2663 2659 2664 CONECT 2664 2663 2665 CONECT 2665 2657 2664 CONECT 2666 2632 2667 2668 2669 CONECT 2667 2666 CONECT 2668 2666 CONECT 2669 2666 CONECT 2670 2671 2675 CONECT 2671 2670 2672 2678 CONECT 2672 2671 2673 CONECT 2673 2672 2674 2690 CONECT 2674 2673 2675 2681 CONECT 2675 2670 2674 2679 CONECT 2676 2690 CONECT 2677 2692 CONECT 2678 2671 CONECT 2679 2675 CONECT 2680 2681 2691 CONECT 2681 2674 2680 CONECT 2682 2683 2684 CONECT 2683 2682 2685 CONECT 2684 2682 2686 CONECT 2685 2683 2693 CONECT 2686 2684 2693 CONECT 2687 2688 2694 CONECT 2688 2687 2696 CONECT 2689 2694 2695 CONECT 2690 2673 2676 CONECT 2691 2680 2695 CONECT 2692 2677 2696 CONECT 2693 2685 2686 2694 CONECT 2694 2687 2689 2693 CONECT 2695 2689 2691 2696 CONECT 2696 2688 2692 2695 MASTER 344 0 4 8 20 0 18 6 2694 2 150 26 END