HEADER HYDROLASE/LIGASE/HYDROLASE 20-JUN-11 3SIP TITLE CRYSTAL STRUCTURE OF DRICE AND DIAP1-BIR1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASPASE; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 78-230; COMPND 5 SYNONYM: DRICE LARGE SUBUNIT, DRICE, CASPASE SUBUNIT P21, CASPASE COMPND 6 SUBUNIT P12; COMPND 7 EC: 3.4.22.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: APOPTOSIS 1 INHIBITOR; COMPND 11 CHAIN: E, F; COMPND 12 FRAGMENT: UNP RESIDUES 31-145; COMPND 13 SYNONYM: DIAP1-BIR1, E3 UBIQUITIN-PROTEIN LIGASE TH, INHIBITOR OF COMPND 14 APOPTOSIS 1, DIAP1, PROTEIN THREAD; COMPND 15 EC: 6.3.2.-; COMPND 16 ENGINEERED: YES; COMPND 17 MUTATION: YES; COMPND 18 MOL_ID: 3; COMPND 19 MOLECULE: CASPASE; COMPND 20 CHAIN: B, D; COMPND 21 FRAGMENT: UNP RESIDUES 231-339; COMPND 22 SYNONYM: DRICE SMALL SUBUNIT, DRICE, CASPASE SUBUNIT P21, CASPASE COMPND 23 SUBUNIT P12; COMPND 24 EC: 3.4.22.-; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 9 ORGANISM_COMMON: FRUIT FLY; SOURCE 10 ORGANISM_TAXID: 7227; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 15 ORGANISM_COMMON: FRUIT FLY; SOURCE 16 ORGANISM_TAXID: 7227; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CASPASE, BIR DOMAIN, HYDROLASE-LIGASE-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.LI,J.WANG,Y.SHI REVDAT 4 01-NOV-23 3SIP 1 REMARK SEQADV LINK REVDAT 3 25-JUL-18 3SIP 1 COMPND SOURCE REVDAT 2 10-JUL-13 3SIP 1 JRNL REVDAT 1 10-AUG-11 3SIP 0 JRNL AUTH X.LI,J.WANG,Y.SHI JRNL TITL STRUCTURAL MECHANISMS OF DIAP1 AUTO-INHIBITION AND JRNL TITL 2 DIAP1-MEDIATED INHIBITION OF DRICE. JRNL REF NAT COMMUN V. 2 408 2011 JRNL REFN ESSN 2041-1723 JRNL PMID 21811237 JRNL DOI 10.1038/NCOMMS1418 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.3_473) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 13710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.250 REMARK 3 FREE R VALUE TEST SET COUNT : 720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0949 - 5.9740 1.00 2776 97 0.2149 0.2328 REMARK 3 2 5.9740 - 4.7432 1.00 2619 153 0.1900 0.2809 REMARK 3 3 4.7432 - 4.1440 1.00 2505 213 0.1684 0.2086 REMARK 3 4 4.1440 - 3.7653 0.99 2560 140 0.2334 0.3267 REMARK 3 5 3.7653 - 3.4955 0.97 2530 117 0.2742 0.3261 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 64.61 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 19.95550 REMARK 3 B22 (A**2) : -4.43320 REMARK 3 B33 (A**2) : -15.52230 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.042 6053 REMARK 3 ANGLE : 1.405 8135 REMARK 3 CHIRALITY : 0.066 867 REMARK 3 PLANARITY : 0.003 1027 REMARK 3 DIHEDRAL : 23.082 3560 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 1:149 ) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 1:152 ) REMARK 3 ATOM PAIRS NUMBER : 1188 REMARK 3 RMSD : 0.021 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B AND (RESSEQ 162:264 ) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 164:263 ) REMARK 3 ATOM PAIRS NUMBER : 800 REMARK 3 RMSD : 0.025 REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN E AND (RESSEQ 1:1 OR RESSEQ 40:139 REMARK 3 ) REMARK 3 SELECTION : CHAIN F AND (RESSEQ 1:1 OR RESSEQ 38:145 REMARK 3 ) REMARK 3 ATOM PAIRS NUMBER : 821 REMARK 3 RMSD : 0.016 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.25627 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13767 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.496 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1I3O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH7.0, 0.3M(NH4)2SO4, 20% REMARK 280 (WT/VOL) POLYETHYLENE GLYCOL 3350 , VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.67500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.36900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.05750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.36900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.67500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 74.05750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.67500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.05750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 78.36900 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.05750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.67500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.36900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 43390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -258.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 78.36900 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 150 REMARK 465 ARG A 151 REMARK 465 SER A 152 REMARK 465 GLN A 153 REMARK 465 THR A 154 REMARK 465 GLU A 155 REMARK 465 THR A 156 REMARK 465 ASP A 157 REMARK 465 GLN C 153 REMARK 465 THR C 154 REMARK 465 GLU C 155 REMARK 465 THR C 156 REMARK 465 ASP C 157 REMARK 465 ASN E 31 REMARK 465 ASN E 32 REMARK 465 ILE E 33 REMARK 465 ASN E 34 REMARK 465 LYS E 35 REMARK 465 THR E 36 REMARK 465 ARG E 37 REMARK 465 MET E 38 REMARK 465 ASN E 39 REMARK 465 ASN E 140 REMARK 465 ASP E 141 REMARK 465 SER E 142 REMARK 465 THR E 143 REMARK 465 LEU E 144 REMARK 465 GLU E 145 REMARK 465 ASN F 31 REMARK 465 ASN F 32 REMARK 465 ILE F 33 REMARK 465 ASN F 34 REMARK 465 LYS F 35 REMARK 465 THR F 36 REMARK 465 ARG F 37 REMARK 465 GLY B 158 REMARK 465 ASP B 159 REMARK 465 SER B 160 REMARK 465 SER B 161 REMARK 465 ARG B 265 REMARK 465 VAL B 266 REMARK 465 GLY D 158 REMARK 465 ASP D 159 REMARK 465 SER D 160 REMARK 465 SER D 161 REMARK 465 MET D 162 REMARK 465 SER D 163 REMARK 465 GLY D 264 REMARK 465 ARG D 265 REMARK 465 VAL D 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET F 38 CG SD CE REMARK 470 GLU F 145 CG CD OE1 OE2 REMARK 470 MET B 162 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 7 -13.64 66.59 REMARK 500 HIS A 9 33.43 -88.93 REMARK 500 GLU A 29 -30.52 -136.78 REMARK 500 THR A 35 -15.36 62.91 REMARK 500 ARG A 51 -72.87 -41.90 REMARK 500 ASP A 65 95.00 -36.60 REMARK 500 CYS A 88 -159.25 -179.28 REMARK 500 SER A 95 -171.44 176.98 REMARK 500 CYS A 123 71.88 -171.18 REMARK 500 GLN A 136 73.15 -118.06 REMARK 500 CYS A 138 12.24 -59.67 REMARK 500 ASP A 141 -27.06 -162.79 REMARK 500 ASP C 7 -14.48 68.11 REMARK 500 HIS C 9 34.06 -89.72 REMARK 500 GLU C 29 -31.41 -136.89 REMARK 500 THR C 35 -15.20 61.91 REMARK 500 ARG C 51 -73.77 -40.12 REMARK 500 ASP C 65 95.06 -36.91 REMARK 500 CYS C 88 -161.52 178.88 REMARK 500 SER C 95 -170.98 177.46 REMARK 500 CYS C 123 71.31 -170.80 REMARK 500 GLN C 136 74.01 -119.56 REMARK 500 CYS C 138 13.32 -59.83 REMARK 500 ASP C 141 -26.28 -161.75 REMARK 500 ARG C 151 155.21 -35.58 REMARK 500 PRO E 55 -159.19 -65.96 REMARK 500 LEU E 56 74.76 45.31 REMARK 500 ASP E 60 89.64 -63.15 REMARK 500 THR E 67 35.11 -93.43 REMARK 500 ALA E 74 103.92 -168.50 REMARK 500 CYS E 83 -3.62 -163.45 REMARK 500 SER E 89 81.57 56.32 REMARK 500 GLN E 92 25.64 -65.69 REMARK 500 GLU E 93 -10.32 -152.12 REMARK 500 CYS E 107 112.11 -27.21 REMARK 500 ARG E 112 34.61 80.62 REMARK 500 ASN E 116 6.37 -59.65 REMARK 500 PRO E 131 -100.82 -57.18 REMARK 500 CYS E 137 17.80 -161.98 REMARK 500 ASN F 39 101.82 -36.01 REMARK 500 ASP F 40 -161.26 -70.62 REMARK 500 PRO F 55 -159.27 -66.01 REMARK 500 LEU F 56 74.76 45.29 REMARK 500 ASP F 60 90.00 -63.56 REMARK 500 THR F 67 34.67 -93.59 REMARK 500 ALA F 74 103.84 -169.12 REMARK 500 CYS F 83 -3.58 -163.12 REMARK 500 SER F 89 80.65 57.72 REMARK 500 GLN F 92 25.55 -66.40 REMARK 500 GLU F 93 -10.68 -151.89 REMARK 500 REMARK 500 THIS ENTRY HAS 86 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN F 39 ASP F 40 -147.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 80 SG REMARK 620 2 CYS E 83 SG 101.4 REMARK 620 3 HIS E 100 NE2 100.3 114.7 REMARK 620 4 CYS E 107 SG 120.2 112.6 107.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 80 SG REMARK 620 2 CYS F 83 SG 100.4 REMARK 620 3 HIS F 100 NE2 100.8 116.1 REMARK 620 4 CYS F 107 SG 119.3 111.8 108.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN F 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SIQ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 ALGS IS A COVALENT PEPTIDE FOR BINDING OF BIR1 MOLECULAR DBREF 3SIP A 5 157 UNP O01382 ICE_DROME 78 230 DBREF 3SIP C 5 157 UNP O01382 ICE_DROME 78 230 DBREF 3SIP E 31 145 UNP Q24306 IAP1_DROME 31 145 DBREF 3SIP F 31 145 UNP Q24306 IAP1_DROME 31 145 DBREF 3SIP B 158 266 UNP O01382 ICE_DROME 231 339 DBREF 3SIP D 158 266 UNP O01382 ICE_DROME 231 339 SEQADV 3SIP ALA A 1 UNP O01382 SEE REMARK 999 SEQADV 3SIP LEU A 2 UNP O01382 SEE REMARK 999 SEQADV 3SIP GLY A 3 UNP O01382 SEE REMARK 999 SEQADV 3SIP SER A 4 UNP O01382 SEE REMARK 999 SEQADV 3SIP ALA C 1 UNP O01382 SEE REMARK 999 SEQADV 3SIP LEU C 2 UNP O01382 SEE REMARK 999 SEQADV 3SIP GLY C 3 UNP O01382 SEE REMARK 999 SEQADV 3SIP SER C 4 UNP O01382 SEE REMARK 999 SEQADV 3SIP SER E 89 UNP Q24306 CYS 89 ENGINEERED MUTATION SEQADV 3SIP SER F 89 UNP Q24306 CYS 89 ENGINEERED MUTATION SEQRES 1 A 157 ALA LEU GLY SER VAL THR ASP ARG HIS ALA ALA GLU TYR SEQRES 2 A 157 ASN MET ARG HIS LYS ASN ARG GLY MET ALA LEU ILE PHE SEQRES 3 A 157 ASN HIS GLU HIS PHE GLU VAL PRO THR LEU LYS SER ARG SEQRES 4 A 157 ALA GLY THR ASN VAL ASP CYS GLU ASN LEU THR ARG VAL SEQRES 5 A 157 LEU LYS GLN LEU ASP PHE GLU VAL THR VAL TYR LYS ASP SEQRES 6 A 157 CYS ARG TYR LYS ASP ILE LEU ARG THR ILE GLU TYR ALA SEQRES 7 A 157 ALA SER GLN ASN HIS SER ASP SER ASP CYS ILE LEU VAL SEQRES 8 A 157 ALA ILE LEU SER HIS GLY GLU MET GLY TYR ILE TYR ALA SEQRES 9 A 157 LYS ASP THR GLN TYR LYS LEU ASP ASN ILE TRP SER PHE SEQRES 10 A 157 PHE THR ALA ASN HIS CYS PRO SER LEU ALA GLY LYS PRO SEQRES 11 A 157 LYS LEU PHE PHE ILE GLN ALA CYS GLN GLY ASP ARG LEU SEQRES 12 A 157 ASP GLY GLY VAL THR MET GLN ARG SER GLN THR GLU THR SEQRES 13 A 157 ASP SEQRES 1 C 157 ALA LEU GLY SER VAL THR ASP ARG HIS ALA ALA GLU TYR SEQRES 2 C 157 ASN MET ARG HIS LYS ASN ARG GLY MET ALA LEU ILE PHE SEQRES 3 C 157 ASN HIS GLU HIS PHE GLU VAL PRO THR LEU LYS SER ARG SEQRES 4 C 157 ALA GLY THR ASN VAL ASP CYS GLU ASN LEU THR ARG VAL SEQRES 5 C 157 LEU LYS GLN LEU ASP PHE GLU VAL THR VAL TYR LYS ASP SEQRES 6 C 157 CYS ARG TYR LYS ASP ILE LEU ARG THR ILE GLU TYR ALA SEQRES 7 C 157 ALA SER GLN ASN HIS SER ASP SER ASP CYS ILE LEU VAL SEQRES 8 C 157 ALA ILE LEU SER HIS GLY GLU MET GLY TYR ILE TYR ALA SEQRES 9 C 157 LYS ASP THR GLN TYR LYS LEU ASP ASN ILE TRP SER PHE SEQRES 10 C 157 PHE THR ALA ASN HIS CYS PRO SER LEU ALA GLY LYS PRO SEQRES 11 C 157 LYS LEU PHE PHE ILE GLN ALA CYS GLN GLY ASP ARG LEU SEQRES 12 C 157 ASP GLY GLY VAL THR MET GLN ARG SER GLN THR GLU THR SEQRES 13 C 157 ASP SEQRES 1 E 115 ASN ASN ILE ASN LYS THR ARG MET ASN ASP LEU ASN ARG SEQRES 2 E 115 GLU GLU THR ARG LEU LYS THR PHE THR ASP TRP PRO LEU SEQRES 3 E 115 ASP TRP LEU ASP LYS ARG GLN LEU ALA GLN THR GLY MET SEQRES 4 E 115 TYR PHE THR HIS ALA GLY ASP LYS VAL LYS CYS PHE PHE SEQRES 5 E 115 CYS GLY VAL GLU ILE GLY SER TRP GLU GLN GLU ASP GLN SEQRES 6 E 115 PRO VAL PRO GLU HIS GLN ARG TRP SER PRO ASN CYS PRO SEQRES 7 E 115 LEU LEU ARG ARG ARG THR THR ASN ASN VAL PRO ILE ASN SEQRES 8 E 115 ALA GLU ALA LEU ASP ARG ILE LEU PRO PRO ILE SER TYR SEQRES 9 E 115 ASP ILE CYS GLY ALA ASN ASP SER THR LEU GLU SEQRES 1 F 115 ASN ASN ILE ASN LYS THR ARG MET ASN ASP LEU ASN ARG SEQRES 2 F 115 GLU GLU THR ARG LEU LYS THR PHE THR ASP TRP PRO LEU SEQRES 3 F 115 ASP TRP LEU ASP LYS ARG GLN LEU ALA GLN THR GLY MET SEQRES 4 F 115 TYR PHE THR HIS ALA GLY ASP LYS VAL LYS CYS PHE PHE SEQRES 5 F 115 CYS GLY VAL GLU ILE GLY SER TRP GLU GLN GLU ASP GLN SEQRES 6 F 115 PRO VAL PRO GLU HIS GLN ARG TRP SER PRO ASN CYS PRO SEQRES 7 F 115 LEU LEU ARG ARG ARG THR THR ASN ASN VAL PRO ILE ASN SEQRES 8 F 115 ALA GLU ALA LEU ASP ARG ILE LEU PRO PRO ILE SER TYR SEQRES 9 F 115 ASP ILE CYS GLY ALA ASN ASP SER THR LEU GLU SEQRES 1 B 109 GLY ASP SER SER MET SER TYR LYS ILE PRO VAL HIS ALA SEQRES 2 B 109 ASP PHE LEU ILE ALA TYR SER THR VAL PRO GLY PHE TYR SEQRES 3 B 109 SER TRP ARG ASN THR THR ARG GLY SER TRP PHE MET GLN SEQRES 4 B 109 SER LEU CYS ALA GLU LEU ALA ALA ASN GLY LYS ARG LEU SEQRES 5 B 109 ASP ILE LEU THR LEU LEU THR PHE VAL CYS GLN ARG VAL SEQRES 6 B 109 ALA VAL ASP PHE GLU SER CYS THR PRO ASP THR PRO GLU SEQRES 7 B 109 MET HIS GLN GLN LYS GLN ILE PRO CYS ILE THR THR MET SEQRES 8 B 109 LEU THR ARG ILE LEU ARG PHE SER ASP LYS GLN LEU ALA SEQRES 9 B 109 PRO ALA GLY ARG VAL SEQRES 1 D 109 GLY ASP SER SER MET SER TYR LYS ILE PRO VAL HIS ALA SEQRES 2 D 109 ASP PHE LEU ILE ALA TYR SER THR VAL PRO GLY PHE TYR SEQRES 3 D 109 SER TRP ARG ASN THR THR ARG GLY SER TRP PHE MET GLN SEQRES 4 D 109 SER LEU CYS ALA GLU LEU ALA ALA ASN GLY LYS ARG LEU SEQRES 5 D 109 ASP ILE LEU THR LEU LEU THR PHE VAL CYS GLN ARG VAL SEQRES 6 D 109 ALA VAL ASP PHE GLU SER CYS THR PRO ASP THR PRO GLU SEQRES 7 D 109 MET HIS GLN GLN LYS GLN ILE PRO CYS ILE THR THR MET SEQRES 8 D 109 LEU THR ARG ILE LEU ARG PHE SER ASP LYS GLN LEU ALA SEQRES 9 D 109 PRO ALA GLY ARG VAL HET ZN E 1 1 HET ZN F 1 1 HETNAM ZN ZINC ION FORMUL 7 ZN 2(ZN 2+) HELIX 1 1 GLY A 41 LEU A 56 1 16 HELIX 2 2 ARG A 67 SER A 80 1 14 HELIX 3 3 ASN A 82 SER A 84 5 3 HELIX 4 4 LEU A 111 SER A 116 1 6 HELIX 5 5 PHE A 117 PHE A 118 5 2 HELIX 6 6 THR A 119 ALA A 127 5 9 HELIX 7 7 GLY C 41 LEU C 56 1 16 HELIX 8 8 ARG C 67 SER C 80 1 14 HELIX 9 9 ASN C 82 SER C 84 5 3 HELIX 10 10 LEU C 111 SER C 116 1 6 HELIX 11 11 PHE C 117 PHE C 118 5 2 HELIX 12 12 THR C 119 ALA C 127 5 9 HELIX 13 13 ARG E 43 LYS E 49 1 7 HELIX 14 14 THR E 50 THR E 52 5 3 HELIX 15 15 ASP E 60 THR E 67 1 8 HELIX 16 16 GLN E 95 SER E 104 1 10 HELIX 17 17 ASN E 121 LEU E 129 1 9 HELIX 18 18 ARG F 43 LYS F 49 1 7 HELIX 19 19 THR F 50 THR F 52 5 3 HELIX 20 20 ASP F 60 THR F 67 1 8 HELIX 21 21 GLN F 95 SER F 104 1 10 HELIX 22 22 ASN F 121 LEU F 129 1 9 HELIX 23 23 TRP B 193 GLY B 206 1 14 HELIX 24 24 ASP B 210 ASP B 225 1 16 HELIX 25 25 THR B 233 HIS B 237 5 5 HELIX 26 26 TRP D 193 GLY D 206 1 14 HELIX 27 27 ASP D 210 ASP D 225 1 16 HELIX 28 28 THR D 233 HIS D 237 5 5 SHEET 1 A 4 LEU A 2 GLY A 3 0 SHEET 2 A 4 GLU E 86 GLY E 88 -1 O GLY E 88 N LEU A 2 SHEET 3 A 4 VAL E 78 CYS E 80 -1 N VAL E 78 O ILE E 87 SHEET 4 A 4 MET E 69 PHE E 71 -1 N TYR E 70 O LYS E 79 SHEET 1 B12 GLU A 59 TYR A 63 0 SHEET 2 B12 ASN A 19 ASN A 27 1 N ILE A 25 O THR A 61 SHEET 3 B12 SER A 86 SER A 95 1 O LEU A 94 N PHE A 26 SHEET 4 B12 LYS A 131 ALA A 137 1 O LEU A 132 N VAL A 91 SHEET 5 B12 PHE B 172 TYR B 176 1 O LEU B 173 N PHE A 133 SHEET 6 B12 CYS B 244 THR B 247 -1 O THR B 246 N ILE B 174 SHEET 7 B12 CYS D 244 THR D 247 -1 O THR D 247 N ILE B 245 SHEET 8 B12 PHE D 172 TYR D 176 -1 N ILE D 174 O THR D 246 SHEET 9 B12 LYS C 131 ALA C 137 1 N PHE C 133 O LEU D 173 SHEET 10 B12 SER C 86 SER C 95 1 N VAL C 91 O LEU C 132 SHEET 11 B12 ASN C 19 ASN C 27 1 N PHE C 26 O LEU C 94 SHEET 12 B12 GLU C 59 TYR C 63 1 O THR C 61 N ILE C 25 SHEET 1 C 2 ILE A 102 TYR A 103 0 SHEET 2 C 2 GLN A 108 TYR A 109 -1 O TYR A 109 N ILE A 102 SHEET 1 D 2 VAL A 147 THR A 148 0 SHEET 2 D 2 LYS D 165 ILE D 166 -1 O ILE D 166 N VAL A 147 SHEET 1 E 4 LEU C 2 GLY C 3 0 SHEET 2 E 4 GLU F 86 GLY F 88 -1 O GLY F 88 N LEU C 2 SHEET 3 E 4 VAL F 78 CYS F 80 -1 N VAL F 78 O ILE F 87 SHEET 4 E 4 MET F 69 PHE F 71 -1 N TYR F 70 O LYS F 79 SHEET 1 F 2 ILE C 102 TYR C 103 0 SHEET 2 F 2 GLN C 108 TYR C 109 -1 O TYR C 109 N ILE C 102 SHEET 1 G 2 VAL C 147 THR C 148 0 SHEET 2 G 2 LYS B 165 ILE B 166 -1 O ILE B 166 N VAL C 147 SHEET 1 H 3 ASP E 135 ILE E 136 0 SHEET 2 H 3 ARG D 186 ASN D 187 -1 O ARG D 186 N ILE E 136 SHEET 3 H 3 GLY D 191 SER D 192 -1 O GLY D 191 N ASN D 187 SHEET 1 I 3 ASP F 135 ILE F 136 0 SHEET 2 I 3 ARG B 186 ASN B 187 -1 O ARG B 186 N ILE F 136 SHEET 3 I 3 GLY B 191 SER B 192 -1 O GLY B 191 N ASN B 187 LINK ZN ZN E 1 SG CYS E 80 1555 1555 2.35 LINK ZN ZN E 1 SG CYS E 83 1555 1555 2.30 LINK ZN ZN E 1 NE2 HIS E 100 1555 1555 2.12 LINK ZN ZN E 1 SG CYS E 107 1555 1555 2.33 LINK ZN ZN F 1 SG CYS F 80 1555 1555 2.34 LINK ZN ZN F 1 SG CYS F 83 1555 1555 2.29 LINK ZN ZN F 1 NE2 HIS F 100 1555 1555 2.08 LINK ZN ZN F 1 SG CYS F 107 1555 1555 2.36 SITE 1 AC1 4 CYS E 80 CYS E 83 HIS E 100 CYS E 107 SITE 1 AC2 4 CYS F 80 CYS F 83 HIS F 100 CYS F 107 CRYST1 91.350 148.115 156.738 90.00 90.00 90.00 I 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010947 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006752 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006380 0.00000