HEADER RNA 22-JUN-11 3SKL TITLE CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO 2'- TITLE 2 DEOXYGUANOSINE, IRIDIUM HEXAMMINE SOAK COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (66-MER); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: DG RIBOSWITCH SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS THREE WAY JUNCTION, RIBOSWITCH, DEOXYGUANOSINE, RNA EXPDTA X-RAY DIFFRACTION AUTHOR O.PIKOVSKAYA,A.POLONSKAIA,D.J.PATEL,A.SERGANOV REVDAT 3 28-FEB-24 3SKL 1 REMARK LINK REVDAT 2 26-OCT-11 3SKL 1 JRNL REVDAT 1 17-AUG-11 3SKL 0 JRNL AUTH O.PIKOVSKAYA,A.POLONSKAIA,D.J.PATEL,A.SERGANOV JRNL TITL STRUCTURAL PRINCIPLES OF NUCLEOSIDE SELECTIVITY IN A JRNL TITL 2 2'-DEOXYGUANOSINE RIBOSWITCH. JRNL REF NAT.CHEM.BIOL. V. 7 748 2011 JRNL REFN ISSN 1552-4450 JRNL PMID 21841796 JRNL DOI 10.1038/NCHEMBIO.631 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 8178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 405 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 551 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.4760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 2826 REMARK 3 HETEROGEN ATOMS : 114 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.467 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.454 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3264 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5124 ; 1.008 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1382 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1255 ; 0.170 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1969 ; 0.280 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 99 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.011 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.225 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.00 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3SKL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066317. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1052 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8487 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M NA-HEPES, PH 7.5, ~40 % (V/V) REMARK 280 PENTAERYTHRITOL PROPOXYLATE, 0.2 M POTASSIUM CHLORIDE AND 0.0- REMARK 280 2.0 MM SPERMIDINE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.00100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.47750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.00100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.47750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG B 206 LIES ON A SPECIAL POSITION. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNG A 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNG B 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IRI A 411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SKR RELATED DB: PDB REMARK 900 RELATED ID: 3SKT RELATED DB: PDB REMARK 900 RELATED ID: 3SKW RELATED DB: PDB REMARK 900 RELATED ID: 3SKZ RELATED DB: PDB DBREF 3SKL A 22 87 PDB 3SKL 3SKL 22 87 DBREF 3SKL B 22 87 PDB 3SKL 3SKL 22 87 SEQRES 1 A 66 GTP G C U U A U A C A G G G SEQRES 2 A 66 U A G C A U A A U G G G C SEQRES 3 A 66 U A C U G A C C C C G C C SEQRES 4 A 66 U U C A A A C C U A U U U SEQRES 5 A 66 G G A G A C U A U A A G U SEQRES 6 A 66 CCC SEQRES 1 B 66 GTP G C U U A U A C A G G G SEQRES 2 B 66 U A G C A U A A U G G G C SEQRES 3 B 66 U A C U G A C C C C G C C SEQRES 4 B 66 U U C A A A C C U A U U U SEQRES 5 B 66 G G A G A C U A U A A G U SEQRES 6 B 66 CCC MODRES 3SKL GTP A 22 G GUANOSINE-5'-TRIPHOSPHATE MODRES 3SKL CCC A 87 C MODRES 3SKL GTP B 22 G GUANOSINE-5'-TRIPHOSPHATE MODRES 3SKL CCC B 87 C HET GTP A 22 32 HET CCC A 87 23 HET GTP B 22 32 HET CCC B 87 23 HET GNG A 120 19 HET MG A 201 1 HET IRI A 402 7 HET IRI A 403 7 HET IRI A 405 7 HET IRI A 409 7 HET IRI A 411 7 HET GNG B 120 19 HET MG B 202 1 HET MG B 203 1 HET MG B 204 1 HET MG B 205 1 HET MG B 206 1 HET IRI B 404 7 HET IRI B 406 7 HET IRI B 407 7 HET IRI B 408 7 HET IRI B 410 7 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE HETNAM GNG 2'-DEOXY-GUANOSINE HETNAM MG MAGNESIUM ION HETNAM IRI IRIDIUM HEXAMMINE ION FORMUL 1 GTP 2(C10 H16 N5 O14 P3) FORMUL 1 CCC 2(C9 H13 N3 O10 P2) FORMUL 3 GNG 2(C10 H13 N5 O4) FORMUL 4 MG 6(MG 2+) FORMUL 5 IRI 10(H18 IR N6 3+) FORMUL 21 HOH *5(H2 O) LINK O3' GTP A 22 P G A 23 1555 1555 1.59 LINK O3' U A 86 P CCC A 87 1555 1555 1.60 LINK O3' GTP B 22 P G B 23 1555 1555 1.59 LINK O3' U B 86 P CCC B 87 1555 1555 1.60 SITE 1 AC1 8 A A 29 C A 30 C A 55 C A 56 SITE 2 AC1 8 C A 57 G A 58 C A 79 U A 80 SITE 1 AC2 9 A B 29 C B 30 C B 55 C B 56 SITE 2 AC2 9 C B 57 G B 58 C B 79 U B 80 SITE 3 AC2 9 MG B 202 SITE 1 AC3 1 GTP A 22 SITE 1 AC4 3 C B 30 A B 31 GNG B 120 SITE 1 AC5 5 GTP B 22 G B 23 C B 24 G B 85 SITE 2 AC5 5 U B 86 SITE 1 AC6 3 G B 32 G B 33 G B 34 SITE 1 AC7 2 C B 68 U B 69 SITE 1 AC8 2 G A 44 G A 45 SITE 1 AC9 8 A A 31 G A 32 U A 61 U A 62 SITE 2 AC9 8 C A 63 U A 73 G A 74 G A 75 SITE 1 BC1 4 U B 51 G B 52 C B 54 C B 56 SITE 1 BC2 5 G A 32 C A 47 U A 48 C A 59 SITE 2 BC2 5 C A 60 SITE 1 BC3 4 G B 58 C B 59 C B 60 C B 63 SITE 1 BC4 2 G B 44 G B 45 SITE 1 BC5 3 A B 31 A B 76 G B 77 SITE 1 BC6 5 U A 51 G A 52 C A 54 C A 55 SITE 2 BC6 5 C A 56 SITE 1 BC7 5 G B 32 C B 47 U B 48 C B 59 SITE 2 BC7 5 C B 60 SITE 1 BC8 3 G A 34 U A 35 U A 72 CRYST1 98.002 34.955 111.057 90.00 92.45 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010204 0.000000 0.000436 0.00000 SCALE2 0.000000 0.028608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009013 0.00000 CONECT 1 2 3 4 5 CONECT 2 1 CONECT 3 1 CONECT 4 1 CONECT 5 1 6 CONECT 6 5 7 8 9 CONECT 7 6 CONECT 8 6 CONECT 9 6 10 CONECT 10 9 11 12 13 CONECT 11 10 CONECT 12 10 CONECT 13 10 14 CONECT 14 13 15 CONECT 15 14 16 17 CONECT 16 15 21 CONECT 17 15 18 19 CONECT 18 17 33 CONECT 19 17 20 21 CONECT 20 19 CONECT 21 16 19 22 CONECT 22 21 23 32 CONECT 23 22 24 CONECT 24 23 25 CONECT 25 24 26 32 CONECT 26 25 27 28 CONECT 27 26 CONECT 28 26 29 CONECT 29 28 30 31 CONECT 30 29 CONECT 31 29 32 CONECT 32 22 25 31 CONECT 33 18 CONECT 1379 1394 CONECT 1391 1392 1393 1402 1404 CONECT 1392 1391 CONECT 1393 1391 CONECT 1394 1379 1395 1396 1397 CONECT 1395 1394 CONECT 1396 1394 CONECT 1397 1394 1398 CONECT 1398 1397 1399 CONECT 1399 1398 1400 1401 CONECT 1400 1399 1405 CONECT 1401 1399 1402 1403 CONECT 1402 1391 1401 CONECT 1403 1401 1404 1405 CONECT 1404 1391 1403 CONECT 1405 1400 1403 1406 CONECT 1406 1405 1407 1413 CONECT 1407 1406 1408 1409 CONECT 1408 1407 CONECT 1409 1407 1410 CONECT 1410 1409 1411 1412 CONECT 1411 1410 CONECT 1412 1410 1413 CONECT 1413 1406 1412 CONECT 1415 1416 1417 1418 1419 CONECT 1416 1415 CONECT 1417 1415 CONECT 1418 1415 CONECT 1419 1415 1420 CONECT 1420 1419 1421 1422 1423 CONECT 1421 1420 CONECT 1422 1420 CONECT 1423 1420 1424 CONECT 1424 1423 1425 1426 1427 CONECT 1425 1424 CONECT 1426 1424 CONECT 1427 1424 1428 CONECT 1428 1427 1429 CONECT 1429 1428 1430 1431 CONECT 1430 1429 1435 CONECT 1431 1429 1432 1433 CONECT 1432 1431 1447 CONECT 1433 1431 1434 1435 CONECT 1434 1433 CONECT 1435 1430 1433 1436 CONECT 1436 1435 1437 1446 CONECT 1437 1436 1438 CONECT 1438 1437 1439 CONECT 1439 1438 1440 1446 CONECT 1440 1439 1441 1442 CONECT 1441 1440 CONECT 1442 1440 1443 CONECT 1443 1442 1444 1445 CONECT 1444 1443 CONECT 1445 1443 1446 CONECT 1446 1436 1439 1445 CONECT 1447 1432 CONECT 2793 2808 CONECT 2805 2806 2807 2816 2818 CONECT 2806 2805 CONECT 2807 2805 CONECT 2808 2793 2809 2810 2811 CONECT 2809 2808 CONECT 2810 2808 CONECT 2811 2808 2812 CONECT 2812 2811 2813 CONECT 2813 2812 2814 2815 CONECT 2814 2813 2819 CONECT 2815 2813 2816 2817 CONECT 2816 2805 2815 CONECT 2817 2815 2818 2819 CONECT 2818 2805 2817 CONECT 2819 2814 2817 2820 CONECT 2820 2819 2821 2827 CONECT 2821 2820 2822 2823 CONECT 2822 2821 CONECT 2823 2821 2824 CONECT 2824 2823 2825 2826 CONECT 2825 2824 CONECT 2826 2824 2827 CONECT 2827 2820 2826 CONECT 2829 2830 CONECT 2830 2829 2831 CONECT 2831 2830 2832 2846 CONECT 2832 2831 2833 CONECT 2833 2832 2834 2845 CONECT 2834 2833 2835 2838 CONECT 2835 2834 2836 CONECT 2836 2835 2837 CONECT 2837 2836 2838 2842 CONECT 2838 2834 2837 2839 CONECT 2839 2838 2840 CONECT 2840 2839 2841 2844 CONECT 2841 2840 2842 CONECT 2842 2837 2841 2843 CONECT 2843 2842 CONECT 2844 2840 CONECT 2845 2833 2846 CONECT 2846 2831 2845 2847 CONECT 2847 2846 CONECT 2849 2850 2851 2852 2853 CONECT 2849 2854 2855 CONECT 2850 2849 CONECT 2851 2849 CONECT 2852 2849 CONECT 2853 2849 CONECT 2854 2849 CONECT 2855 2849 CONECT 2856 2857 2858 2859 2860 CONECT 2856 2861 2862 CONECT 2857 2856 CONECT 2858 2856 CONECT 2859 2856 CONECT 2860 2856 CONECT 2861 2856 CONECT 2862 2856 CONECT 2863 2864 2865 2866 2867 CONECT 2863 2868 2869 CONECT 2864 2863 CONECT 2865 2863 CONECT 2866 2863 CONECT 2867 2863 CONECT 2868 2863 CONECT 2869 2863 CONECT 2870 2871 2872 2873 2874 CONECT 2870 2875 2876 CONECT 2871 2870 CONECT 2872 2870 CONECT 2873 2870 CONECT 2874 2870 CONECT 2875 2870 CONECT 2876 2870 CONECT 2877 2878 2879 2880 2881 CONECT 2877 2882 2883 CONECT 2878 2877 CONECT 2879 2877 CONECT 2880 2877 CONECT 2881 2877 CONECT 2882 2877 CONECT 2883 2877 CONECT 2884 2885 CONECT 2885 2884 2886 CONECT 2886 2885 2887 2901 CONECT 2887 2886 2888 CONECT 2888 2887 2889 2900 CONECT 2889 2888 2890 2893 CONECT 2890 2889 2891 CONECT 2891 2890 2892 CONECT 2892 2891 2893 2897 CONECT 2893 2889 2892 2894 CONECT 2894 2893 2895 CONECT 2895 2894 2896 2899 CONECT 2896 2895 2897 CONECT 2897 2892 2896 2898 CONECT 2898 2897 CONECT 2899 2895 CONECT 2900 2888 2901 CONECT 2901 2886 2900 2902 CONECT 2902 2901 CONECT 2908 2909 2910 2911 2912 CONECT 2908 2913 2914 CONECT 2909 2908 CONECT 2910 2908 CONECT 2911 2908 CONECT 2912 2908 CONECT 2913 2908 CONECT 2914 2908 CONECT 2915 2916 2917 2918 2919 CONECT 2915 2920 2921 CONECT 2916 2915 CONECT 2917 2915 CONECT 2918 2915 CONECT 2919 2915 CONECT 2920 2915 CONECT 2921 2915 CONECT 2922 2923 2924 2925 2926 CONECT 2922 2927 2928 CONECT 2923 2922 CONECT 2924 2922 CONECT 2925 2922 CONECT 2926 2922 CONECT 2927 2922 CONECT 2928 2922 CONECT 2929 2930 2931 2932 2933 CONECT 2929 2934 2935 CONECT 2930 2929 CONECT 2931 2929 CONECT 2932 2929 CONECT 2933 2929 CONECT 2934 2929 CONECT 2935 2929 CONECT 2936 2937 2938 2939 2940 CONECT 2936 2941 2942 CONECT 2937 2936 CONECT 2938 2936 CONECT 2939 2936 CONECT 2940 2936 CONECT 2941 2936 CONECT 2942 2936 MASTER 326 0 22 0 0 0 25 6 2945 2 232 12 END