HEADER METAL TRANSPORT 23-JUN-11 3SKQ TITLE MDM38 IS A 14-3-3-LIKE RECEPTOR AND ASSOCIATES WITH THE PROTEIN TITLE 2 SYNTHESIS MACHINERY AT THE INNER MITOCHONDRIAL MEMBRANE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL DISTRIBUTION AND MORPHOLOGY PROTEIN 38; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL FRAGMENT, UNP RESIDUES 160-408; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: MDM38, YOL027C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS R (DE3) -RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T3 KEYWDS 14-3-3-LIKE MEMBRANE PROTEIN, MITOCHONDRIAL RIBOSOME, RESPIRATORY KEYWDS 2 CHAIN BIOGENESIS, LETM1 HOMOLOG, 14-3-3 LIKE FOLD, RIBOSOME BINDING KEYWDS 3 RECEPTOR, RIBOSOMES, MITOCHONDRIAL INNER MEMBRANE, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR D.LUPO,I.TEWS,I.SINNING REVDAT 3 28-FEB-24 3SKQ 1 REMARK REVDAT 2 28-SEP-11 3SKQ 1 JRNL REVDAT 1 27-JUL-11 3SKQ 0 JRNL AUTH D.LUPO,C.VOLLMER,M.DECKERS,D.U.MICK,I.TEWS,I.SINNING, JRNL AUTH 2 P.REHLING JRNL TITL MDM38 IS A 14-3-3-LIKE RECEPTOR AND ASSOCIATES WITH THE JRNL TITL 2 PROTEIN SYNTHESIS MACHINERY AT THE INNER MITOCHONDRIAL JRNL TITL 3 MEMBRANE. JRNL REF TRAFFIC V. 12 1457 2011 JRNL REFN ISSN 1398-9219 JRNL PMID 21718401 JRNL DOI 10.1111/J.1600-0854.2011.01239.X REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 16560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 831 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8686 - 3.8152 0.96 2622 154 0.1713 0.1790 REMARK 3 2 3.8152 - 3.0285 0.99 2629 146 0.1787 0.2110 REMARK 3 3 3.0285 - 2.6458 0.98 2638 123 0.1961 0.2621 REMARK 3 4 2.6458 - 2.4039 0.99 2613 140 0.2301 0.2784 REMARK 3 5 2.4039 - 2.2316 0.98 2628 135 0.2295 0.2897 REMARK 3 6 2.2316 - 2.1000 0.98 2599 133 0.2671 0.3309 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 35.29 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.24770 REMARK 3 B22 (A**2) : 9.90260 REMARK 3 B33 (A**2) : -7.65490 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.96340 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1881 REMARK 3 ANGLE : 0.967 2526 REMARK 3 CHIRALITY : 0.071 279 REMARK 3 PLANARITY : 0.004 321 REMARK 3 DIHEDRAL : 13.263 731 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 182:200) REMARK 3 ORIGIN FOR THE GROUP (A): 47.2004 19.6851 20.1424 REMARK 3 T TENSOR REMARK 3 T11: 0.2833 T22: 0.1668 REMARK 3 T33: 0.2402 T12: -0.0077 REMARK 3 T13: -0.0541 T23: -0.1021 REMARK 3 L TENSOR REMARK 3 L11: 0.6390 L22: 1.4613 REMARK 3 L33: 1.7898 L12: -0.5080 REMARK 3 L13: 0.4731 L23: -0.9268 REMARK 3 S TENSOR REMARK 3 S11: -0.0931 S12: -0.2205 S13: 0.7949 REMARK 3 S21: 0.2603 S22: -0.2923 S23: -0.3176 REMARK 3 S31: -0.3213 S32: 0.4594 S33: -0.2655 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 201:227) REMARK 3 ORIGIN FOR THE GROUP (A): 53.3384 4.1719 -0.1542 REMARK 3 T TENSOR REMARK 3 T11: 0.2366 T22: 0.3813 REMARK 3 T33: 0.2136 T12: 0.1252 REMARK 3 T13: 0.0364 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.3900 L22: 0.9451 REMARK 3 L33: 0.9609 L12: -0.5418 REMARK 3 L13: 0.3370 L23: -0.1769 REMARK 3 S TENSOR REMARK 3 S11: 0.1220 S12: 0.6437 S13: 0.0754 REMARK 3 S21: -0.0000 S22: -0.0947 S23: -0.2433 REMARK 3 S31: 0.2197 S32: 0.6376 S33: -0.0291 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 228:276) REMARK 3 ORIGIN FOR THE GROUP (A): 45.7469 10.1853 11.1934 REMARK 3 T TENSOR REMARK 3 T11: 0.1605 T22: 0.1486 REMARK 3 T33: 0.1790 T12: 0.0313 REMARK 3 T13: 0.0017 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 1.4802 L22: 1.4046 REMARK 3 L33: 1.3672 L12: 0.0784 REMARK 3 L13: 0.6790 L23: -0.1783 REMARK 3 S TENSOR REMARK 3 S11: 0.0147 S12: -0.1706 S13: 0.0243 REMARK 3 S21: 0.1384 S22: -0.1554 S23: -0.1045 REMARK 3 S31: 0.0088 S32: 0.0824 S33: 0.0332 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 277:301) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2663 4.1207 17.9688 REMARK 3 T TENSOR REMARK 3 T11: 0.2073 T22: 0.2432 REMARK 3 T33: 0.2389 T12: -0.0297 REMARK 3 T13: 0.0315 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.0285 L22: 1.3567 REMARK 3 L33: 1.2456 L12: 0.0481 REMARK 3 L13: 0.0196 L23: -0.1612 REMARK 3 S TENSOR REMARK 3 S11: 0.2133 S12: -0.3213 S13: -0.3387 REMARK 3 S21: 0.2193 S22: 0.0023 S23: 0.3363 REMARK 3 S31: 0.1252 S32: -0.3789 S33: -0.0536 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 302:318) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1098 17.3265 15.3595 REMARK 3 T TENSOR REMARK 3 T11: 0.2172 T22: 0.4099 REMARK 3 T33: 0.3306 T12: 0.0915 REMARK 3 T13: 0.0780 T23: -0.0580 REMARK 3 L TENSOR REMARK 3 L11: 0.7021 L22: 0.4792 REMARK 3 L33: 0.2797 L12: -0.0024 REMARK 3 L13: 0.1845 L23: -0.0308 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: -0.1544 S13: 0.0864 REMARK 3 S21: 0.3219 S22: 0.0032 S23: 0.5384 REMARK 3 S31: -0.3091 S32: -0.3519 S33: 0.0503 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 319:342) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5687 18.4521 9.5037 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.1912 REMARK 3 T33: 0.2923 T12: 0.0643 REMARK 3 T13: 0.0002 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.6101 L22: 0.4253 REMARK 3 L33: 0.7527 L12: -0.1597 REMARK 3 L13: 0.0802 L23: -0.2574 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: -0.0659 S13: 0.2121 REMARK 3 S21: -0.1455 S22: 0.1375 S23: 0.0383 REMARK 3 S31: -0.3076 S32: -0.2394 S33: 0.0109 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 343:358) REMARK 3 ORIGIN FOR THE GROUP (A): 39.5275 11.3358 8.9213 REMARK 3 T TENSOR REMARK 3 T11: 0.1592 T22: 0.1389 REMARK 3 T33: 0.1815 T12: 0.0078 REMARK 3 T13: 0.0130 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.1080 L22: 0.2649 REMARK 3 L33: 0.7809 L12: -0.1865 REMARK 3 L13: 0.4392 L23: -0.4040 REMARK 3 S TENSOR REMARK 3 S11: 0.0456 S12: 0.2727 S13: 0.0989 REMARK 3 S21: -0.0147 S22: 0.0974 S23: 0.0985 REMARK 3 S31: 0.0175 S32: -0.0321 S33: 0.0172 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 359:367) REMARK 3 ORIGIN FOR THE GROUP (A): 49.8101 24.2831 7.5491 REMARK 3 T TENSOR REMARK 3 T11: 0.4850 T22: 0.4512 REMARK 3 T33: 0.4226 T12: -0.1054 REMARK 3 T13: 0.0931 T23: 0.0823 REMARK 3 L TENSOR REMARK 3 L11: 1.2546 L22: 0.6581 REMARK 3 L33: 0.9672 L12: 0.4253 REMARK 3 L13: 0.1145 L23: -0.6430 REMARK 3 S TENSOR REMARK 3 S11: 0.0726 S12: 0.1457 S13: 0.2683 REMARK 3 S21: 0.2809 S22: 0.2784 S23: -0.0075 REMARK 3 S31: -0.4762 S32: 0.1898 S33: 0.1167 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 368:382) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5500 20.9110 -8.3317 REMARK 3 T TENSOR REMARK 3 T11: 0.1770 T22: 0.2298 REMARK 3 T33: 0.2004 T12: 0.0485 REMARK 3 T13: -0.0224 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.1858 L22: 0.9655 REMARK 3 L33: 1.3800 L12: -0.0946 REMARK 3 L13: 0.9597 L23: -0.5122 REMARK 3 S TENSOR REMARK 3 S11: -0.0567 S12: 0.3391 S13: 0.1916 REMARK 3 S21: -0.2143 S22: -0.2108 S23: 0.0910 REMARK 3 S31: -0.2351 S32: 0.2164 S33: 0.0730 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 383:408) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3645 15.3593 3.6501 REMARK 3 T TENSOR REMARK 3 T11: 0.1903 T22: 0.1632 REMARK 3 T33: 0.1862 T12: 0.0045 REMARK 3 T13: 0.0251 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.3590 L22: 1.1140 REMARK 3 L33: 1.4207 L12: 0.6394 REMARK 3 L13: 0.0078 L23: -0.0930 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: -0.1831 S13: 0.2992 REMARK 3 S21: -0.1053 S22: -0.0469 S23: -0.1664 REMARK 3 S31: -0.0553 S32: 0.1585 S33: 0.0520 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93340 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16561 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.76200 REMARK 200 R SYM FOR SHELL (I) : 0.40500 REMARK 200 FOR SHELL : 3.110 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25M KI AND 21% PEG3350, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.26350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.01650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.26350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.01650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 160 REMARK 465 LEU A 161 REMARK 465 PHE A 162 REMARK 465 PRO A 163 REMARK 465 ASN A 164 REMARK 465 LEU A 165 REMARK 465 LEU A 166 REMARK 465 PRO A 167 REMARK 465 SER A 168 REMARK 465 THR A 169 REMARK 465 TYR A 170 REMARK 465 GLU A 171 REMARK 465 SER A 172 REMARK 465 GLY A 173 REMARK 465 LYS A 174 REMARK 465 ASP A 175 REMARK 465 LYS A 176 REMARK 465 GLN A 177 REMARK 465 ALA A 178 REMARK 465 LYS A 179 REMARK 465 ARG A 180 REMARK 465 ASN A 181 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 226 O HOH A 19 2.03 REMARK 500 O HOH A 57 O HOH A 72 2.07 REMARK 500 O HOH A 130 O HOH A 132 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 232 55.89 -165.16 REMARK 500 LYS A 321 -83.33 -50.51 REMARK 500 ALA A 322 -40.06 83.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 10 DBREF 3SKQ A 160 408 UNP Q08179 MDM38_YEAST 160 408 SEQRES 1 A 249 LYS LEU PHE PRO ASN LEU LEU PRO SER THR TYR GLU SER SEQRES 2 A 249 GLY LYS ASP LYS GLN ALA LYS ARG ASN LYS LEU ILE GLU SEQRES 3 A 249 ILE ARG LYS LYS THR SER GLU PHE LEU HIS GLU THR LEU SEQRES 4 A 249 GLU GLU SER ASN LEU ILE THR TYR ASN THR ILE GLU ASN SEQRES 5 A 249 ALA GLU LYS LYS GLN LYS PHE LEU ASN PHE PHE ARG LYS SEQRES 6 A 249 LEU TYR SER ALA LYS GLU GLY LYS ILE MET THR PHE GLN SEQRES 7 A 249 HIS ASP GLU ILE SER ALA ILE ALA GLN MET PHE LYS ASN SEQRES 8 A 249 ASP SER VAL LEU ASP ASN LEU SER ARG PRO GLN LEU ALA SEQRES 9 A 249 ALA MET SER LYS PHE MET SER LEU ARG PRO PHE GLY ASN SEQRES 10 A 249 ASP ASN MET LEU ARG TYR GLN ILE ARG SER LYS LEU LYS SEQRES 11 A 249 ASP ILE MET ASN ASP ASP LYS THR ILE ASP TYR GLU GLY SEQRES 12 A 249 VAL GLU SER LEU SER GLN GLU GLU LEU TYR GLN ALA CYS SEQRES 13 A 249 VAL SER ARG GLY MET LYS ALA TYR GLY VAL SER LYS GLU SEQRES 14 A 249 ASP LEU VAL ASP ASN LEU LYS VAL TRP LEU GLU LEU ARG SEQRES 15 A 249 LEU ARG GLN LYS ILE PRO SER VAL LEU MET VAL LEU SER SEQRES 16 A 249 SER THR PHE THR PHE GLY GLY LEU PRO LYS GLU ASN TYR SEQRES 17 A 249 SER LYS ALA PHE SER PRO LEU ALA GLU LYS LYS GLU THR SEQRES 18 A 249 LYS SER LYS TYR ASP ASP LEU LEU ASP LEU TYR TYR ASP SEQRES 19 A 249 GLY ILE LEU GLN VAL LEU SER SER ILE PRO ASP PRO VAL SEQRES 20 A 249 TYR ASN HET IOD A 1 1 HET IOD A 2 1 HET IOD A 3 1 HET IOD A 4 1 HET IOD A 5 1 HET IOD A 7 1 HET IOD A 8 1 HET IOD A 9 1 HET K A 10 1 HETNAM IOD IODIDE ION HETNAM K POTASSIUM ION FORMUL 2 IOD 8(I 1-) FORMUL 10 K K 1+ FORMUL 11 HOH *149(H2 O) HELIX 1 1 LYS A 182 GLU A 199 1 18 HELIX 2 2 THR A 205 ILE A 209 5 5 HELIX 3 3 ASN A 211 SER A 227 1 17 HELIX 4 4 HIS A 238 GLN A 246 1 9 HELIX 5 5 LYS A 249 LEU A 257 1 9 HELIX 6 6 SER A 258 MET A 269 1 12 HELIX 7 7 ASN A 276 GLY A 302 1 27 HELIX 8 8 VAL A 303 LEU A 306 5 4 HELIX 9 9 SER A 307 ARG A 318 1 12 HELIX 10 10 SER A 326 ARG A 343 1 18 HELIX 11 11 PRO A 347 THR A 356 1 10 HELIX 12 12 PHE A 357 PHE A 359 5 3 HELIX 13 13 SER A 372 LYS A 377 1 6 HELIX 14 14 SER A 382 ILE A 402 1 21 SHEET 1 A 2 MET A 234 GLN A 237 0 SHEET 2 A 2 SER A 368 PHE A 371 1 O LYS A 369 N PHE A 236 CISPEP 1 GLY A 360 GLY A 361 0 0.48 SITE 1 AC1 1 HOH A 136 SITE 1 AC2 2 HOH A 53 ASN A 250 SITE 1 AC3 1 SER A 258 SITE 1 AC4 1 HOH A 116 SITE 1 AC5 3 ARG A 187 LYS A 321 TYR A 323 SITE 1 AC6 2 ASP A 239 PRO A 373 CRYST1 124.527 52.033 47.232 90.00 108.65 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008030 0.000000 0.002711 0.00000 SCALE2 0.000000 0.019219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022346 0.00000