HEADER HYDROLASE 23-JUN-11 3SKY TITLE 2.1A CRYSTAL STRUCTURE OF THE PHOSPHATE BOUND ATP BINDING DOMAIN OF TITLE 2 ARCHAEOGLOBUS FULGIDUS COPB COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER-EXPORTING P-TYPE ATPASE B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ATP BINDING DOMAIN (UNP RESIDUES 372-636); COMPND 5 EC: 3.6.3.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 224325; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: AF_0152, COPB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B(+) KEYWDS P1B-ATPASE, ATP BINDING DOMAIN, COPPER(II) TRANSPORTER, MEMBRANE KEYWDS 2 PROTEIN, AMPPNP, PHOSPHATE ION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.JAYAKANTHAN,S.A.ROBERTS,A.WEICHSEL,J.M.ARGUELLO,M.M.MCEVOY REVDAT 3 28-FEB-24 3SKY 1 REMARK SEQADV REVDAT 2 26-SEP-12 3SKY 1 JRNL REVDAT 1 20-JUN-12 3SKY 0 JRNL AUTH S.JAYAKANTHAN,S.A.ROBERTS,A.WEICHSEL,J.M.ARGUELLO,M.M.MCEVOY JRNL TITL CONFORMATIONS OF THE APO-, SUBSTRATE-BOUND AND JRNL TITL 2 PHOSPHATE-BOUND ATP-BINDING DOMAIN OF THE CU(II) ATPASE COPB JRNL TITL 3 ILLUSTRATE COUPLING OF DOMAIN MOVEMENT TO THE CATALYTIC JRNL TITL 4 CYCLE. JRNL REF BIOSCI.REP. V. 32 443 2012 JRNL REFN ISSN 0144-8463 JRNL PMID 22663904 JRNL DOI 10.1042/BSR20120048 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 106.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 13824 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 734 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 952 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1977 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.08000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : -2.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.160 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.918 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2065 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1409 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2794 ; 1.284 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3448 ; 0.830 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 270 ; 5.985 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;36.947 ;24.565 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 368 ;15.942 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;10.378 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 320 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2330 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 401 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1314 ; 0.650 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 545 ; 0.149 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2110 ; 1.173 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 751 ; 1.880 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 682 ; 3.114 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 375 A 410 REMARK 3 ORIGIN FOR THE GROUP (A): 43.2038 10.7277 70.7485 REMARK 3 T TENSOR REMARK 3 T11: 0.1617 T22: 0.0725 REMARK 3 T33: 0.0842 T12: 0.0117 REMARK 3 T13: -0.0039 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 3.0315 L22: 1.1736 REMARK 3 L33: 3.8786 L12: 0.6145 REMARK 3 L13: 2.3102 L23: 0.5703 REMARK 3 S TENSOR REMARK 3 S11: 0.2926 S12: 0.0196 S13: -0.3220 REMARK 3 S21: 0.0114 S22: -0.0590 S23: 0.0109 REMARK 3 S31: 0.2754 S32: -0.1576 S33: -0.2336 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 411 A 441 REMARK 3 ORIGIN FOR THE GROUP (A): 56.2673 4.8043 89.3959 REMARK 3 T TENSOR REMARK 3 T11: 0.2711 T22: 0.0664 REMARK 3 T33: 0.0988 T12: -0.0728 REMARK 3 T13: -0.0546 T23: 0.0586 REMARK 3 L TENSOR REMARK 3 L11: 4.2808 L22: 6.6615 REMARK 3 L33: 4.5601 L12: -1.4225 REMARK 3 L13: 0.6342 L23: 1.3717 REMARK 3 S TENSOR REMARK 3 S11: 0.3019 S12: -0.1980 S13: -0.1562 REMARK 3 S21: 0.6237 S22: -0.0758 S23: 0.0807 REMARK 3 S31: 0.5678 S32: -0.2181 S33: -0.2261 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 442 A 473 REMARK 3 ORIGIN FOR THE GROUP (A): 58.7097 8.7330 99.5714 REMARK 3 T TENSOR REMARK 3 T11: 0.3793 T22: 0.4268 REMARK 3 T33: 0.1623 T12: -0.0770 REMARK 3 T13: -0.0338 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 0.4314 L22: 5.8964 REMARK 3 L33: 9.6228 L12: 1.9610 REMARK 3 L13: 0.2190 L23: -0.0272 REMARK 3 S TENSOR REMARK 3 S11: 0.3332 S12: -0.1713 S13: -0.0598 REMARK 3 S21: 0.9506 S22: -0.0334 S23: -0.0856 REMARK 3 S31: 0.2835 S32: -0.1567 S33: -0.2998 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 474 A 486 REMARK 3 ORIGIN FOR THE GROUP (A): 57.1475 24.9816 93.5559 REMARK 3 T TENSOR REMARK 3 T11: 0.4928 T22: 0.7619 REMARK 3 T33: 1.2744 T12: -0.0117 REMARK 3 T13: 0.0381 T23: -0.8150 REMARK 3 L TENSOR REMARK 3 L11: 18.2029 L22: 6.2085 REMARK 3 L33: 19.4150 L12: -4.5171 REMARK 3 L13: -4.7389 L23: -6.4787 REMARK 3 S TENSOR REMARK 3 S11: 0.5200 S12: -3.4008 S13: 5.1239 REMARK 3 S21: 0.9252 S22: 1.2281 S23: -1.3894 REMARK 3 S31: -2.2708 S32: 0.6317 S33: -1.7481 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 487 A 505 REMARK 3 ORIGIN FOR THE GROUP (A): 56.8244 19.3304 88.0155 REMARK 3 T TENSOR REMARK 3 T11: 0.1922 T22: 0.1239 REMARK 3 T33: 0.1555 T12: -0.0133 REMARK 3 T13: 0.0005 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 5.6798 L22: 2.3898 REMARK 3 L33: 9.1354 L12: -2.2842 REMARK 3 L13: 6.0514 L23: -3.8417 REMARK 3 S TENSOR REMARK 3 S11: -0.1168 S12: -0.2315 S13: 0.5894 REMARK 3 S21: 0.2708 S22: -0.1518 S23: 0.0469 REMARK 3 S31: -0.2649 S32: -0.1574 S33: 0.2686 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 506 A 519 REMARK 3 ORIGIN FOR THE GROUP (A): 51.3084 10.6842 78.2584 REMARK 3 T TENSOR REMARK 3 T11: 0.3697 T22: 0.2833 REMARK 3 T33: 0.3130 T12: 0.0845 REMARK 3 T13: -0.0930 T23: -0.0392 REMARK 3 L TENSOR REMARK 3 L11: 1.0075 L22: 1.0162 REMARK 3 L33: 6.3277 L12: 1.2651 REMARK 3 L13: 2.9292 L23: 2.6746 REMARK 3 S TENSOR REMARK 3 S11: 0.3148 S12: 0.2612 S13: -0.3189 REMARK 3 S21: 0.2631 S22: 0.2062 S23: -0.2666 REMARK 3 S31: 0.4219 S32: 0.4185 S33: -0.5211 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 520 A 548 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2568 17.0587 66.5330 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.0908 REMARK 3 T33: 0.0427 T12: -0.0124 REMARK 3 T13: 0.0121 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.9670 L22: 2.3818 REMARK 3 L33: 5.9962 L12: 0.4122 REMARK 3 L13: 1.0599 L23: 1.9004 REMARK 3 S TENSOR REMARK 3 S11: -0.1007 S12: 0.1513 S13: 0.0308 REMARK 3 S21: -0.1034 S22: 0.0903 S23: -0.1700 REMARK 3 S31: -0.0924 S32: 0.3676 S33: 0.0104 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 549 A 585 REMARK 3 ORIGIN FOR THE GROUP (A): 32.3748 19.1642 68.1287 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.1426 REMARK 3 T33: 0.0823 T12: 0.0323 REMARK 3 T13: -0.0216 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.5665 L22: 3.6757 REMARK 3 L33: 3.8198 L12: 0.3325 REMARK 3 L13: -0.7539 L23: 1.2483 REMARK 3 S TENSOR REMARK 3 S11: 0.0464 S12: 0.0660 S13: 0.1590 REMARK 3 S21: -0.0998 S22: -0.1100 S23: 0.3069 REMARK 3 S31: -0.4304 S32: -0.3003 S33: 0.0637 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 586 A 613 REMARK 3 ORIGIN FOR THE GROUP (A): 27.1458 4.8748 67.8916 REMARK 3 T TENSOR REMARK 3 T11: 0.1406 T22: 0.2836 REMARK 3 T33: 0.1746 T12: -0.1246 REMARK 3 T13: 0.0628 T23: -0.0512 REMARK 3 L TENSOR REMARK 3 L11: 5.7427 L22: 12.8433 REMARK 3 L33: 5.3773 L12: -1.8464 REMARK 3 L13: 2.2174 L23: -1.2717 REMARK 3 S TENSOR REMARK 3 S11: -0.0430 S12: -0.4387 S13: -0.4610 REMARK 3 S21: 0.4081 S22: 0.0016 S23: 0.8021 REMARK 3 S31: 0.5001 S32: -0.8421 S33: 0.0414 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 614 A 635 REMARK 3 ORIGIN FOR THE GROUP (A): 35.5548 3.4418 56.5374 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.1565 REMARK 3 T33: 0.0857 T12: -0.0148 REMARK 3 T13: 0.0201 T23: -0.0470 REMARK 3 L TENSOR REMARK 3 L11: 0.5620 L22: 3.8843 REMARK 3 L33: 3.0187 L12: -0.6740 REMARK 3 L13: 0.1496 L23: 2.2895 REMARK 3 S TENSOR REMARK 3 S11: 0.1266 S12: 0.0066 S13: -0.0637 REMARK 3 S21: -0.1296 S22: -0.1600 S23: 0.0410 REMARK 3 S31: 0.3090 S32: 0.0478 S33: 0.0335 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3SKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14659 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 106.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.810 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.69 REMARK 200 R MERGE FOR SHELL (I) : 0.26900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAR325 REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: STARTING MODEL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CH3COONH4, 0.1 M TRIS PH 8.5, 25 REMARK 280 % W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.45450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.26950 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.45450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.26950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 371 REMARK 465 ARG A 372 REMARK 465 ASP A 373 REMARK 465 ARG A 374 REMARK 465 LYS A 636 REMARK 465 LEU A 637 REMARK 465 GLU A 638 REMARK 465 HIS A 639 REMARK 465 HIS A 640 REMARK 465 HIS A 641 REMARK 465 HIS A 642 REMARK 465 HIS A 643 REMARK 465 HIS A 644 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 413 CG CD OE1 OE2 REMARK 470 GLU A 448 CG CD OE1 OE2 REMARK 470 LYS A 456 CB CG CD CE NZ REMARK 470 LEU A 478 CD1 CD2 REMARK 470 THR A 610 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 390 OD2 ASP A 539 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 424 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 393 -65.91 -100.91 REMARK 500 HIS A 409 136.21 -170.83 REMARK 500 LYS A 456 -68.71 -131.02 REMARK 500 ASP A 605 -68.03 -94.39 REMARK 500 ASN A 618 74.97 -107.16 REMARK 500 ASN A 618 74.97 -106.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPO A 645 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SKX RELATED DB: PDB DBREF 3SKY A 372 636 UNP O30085 COPB_ARCFU 372 636 SEQADV 3SKY MET A 371 UNP O30085 INITIATING METHIONINE SEQADV 3SKY LEU A 637 UNP O30085 EXPRESSION TAG SEQADV 3SKY GLU A 638 UNP O30085 EXPRESSION TAG SEQADV 3SKY HIS A 639 UNP O30085 EXPRESSION TAG SEQADV 3SKY HIS A 640 UNP O30085 EXPRESSION TAG SEQADV 3SKY HIS A 641 UNP O30085 EXPRESSION TAG SEQADV 3SKY HIS A 642 UNP O30085 EXPRESSION TAG SEQADV 3SKY HIS A 643 UNP O30085 EXPRESSION TAG SEQADV 3SKY HIS A 644 UNP O30085 EXPRESSION TAG SEQRES 1 A 274 MET ARG ASP ARG GLN ALA PHE GLU ARG ALA LYS ASP LEU SEQRES 2 A 274 GLN ALA VAL ILE PHE ASP LYS THR GLY THR LEU THR GLU SEQRES 3 A 274 GLY ARG PHE GLY VAL THR ASP ILE VAL GLY PHE ASN HIS SEQRES 4 A 274 SER GLU ASP GLU LEU LEU GLN ILE ALA ALA SER LEU GLU SEQRES 5 A 274 ALA ARG SER GLU HIS PRO ILE ALA ALA ALA ILE VAL GLU SEQRES 6 A 274 GLU ALA GLU LYS ARG GLY PHE GLY LEU THR GLU VAL GLU SEQRES 7 A 274 GLU PHE ARG ALA ILE PRO GLY LYS GLY VAL GLU GLY ILE SEQRES 8 A 274 VAL ASN GLY ARG ARG TYR MET VAL VAL SER PRO GLY TYR SEQRES 9 A 274 ILE ARG GLU LEU GLY ILE LYS THR ASP GLU SER VAL GLU SEQRES 10 A 274 LYS LEU LYS GLN GLN GLY LYS THR VAL VAL PHE ILE LEU SEQRES 11 A 274 LYS ASN GLY GLU VAL SER GLY VAL ILE ALA LEU ALA ASP SEQRES 12 A 274 ARG ILE ARG PRO GLU SER ARG GLU ALA ILE SER LYS LEU SEQRES 13 A 274 LYS ALA ILE GLY ILE LYS CYS MET MET LEU THR GLY ASP SEQRES 14 A 274 ASN ARG PHE VAL ALA LYS TRP VAL ALA GLU GLU LEU GLY SEQRES 15 A 274 LEU ASP ASP TYR PHE ALA GLU VAL LEU PRO HIS GLU LYS SEQRES 16 A 274 ALA GLU LYS VAL LYS GLU VAL GLN GLN LYS TYR VAL THR SEQRES 17 A 274 ALA MET VAL GLY ASP GLY VAL ASN ASP ALA PRO ALA LEU SEQRES 18 A 274 ALA GLN ALA ASP VAL GLY ILE ALA ILE GLY ALA GLY THR SEQRES 19 A 274 ASP VAL ALA VAL GLU THR ALA ASP ILE VAL LEU VAL ARG SEQRES 20 A 274 ASN ASP PRO ARG ASP VAL ALA ALA ILE VAL GLU LEU SER SEQRES 21 A 274 ARG LYS THR TYR SER LYS LEU GLU HIS HIS HIS HIS HIS SEQRES 22 A 274 HIS HET PO4 A 1 5 HET MPO A 645 13 HETNAM PO4 PHOSPHATE ION HETNAM MPO 3[N-MORPHOLINO]PROPANE SULFONIC ACID FORMUL 2 PO4 O4 P 3- FORMUL 3 MPO C7 H15 N O4 S FORMUL 4 HOH *92(H2 O) HELIX 1 1 GLN A 375 ALA A 380 1 6 HELIX 2 2 LYS A 381 LEU A 383 5 3 HELIX 3 3 SER A 410 ALA A 423 1 14 HELIX 4 4 HIS A 427 ARG A 440 1 14 HELIX 5 5 SER A 471 GLY A 479 1 9 HELIX 6 6 SER A 485 GLN A 492 1 8 HELIX 7 7 GLU A 518 ILE A 529 1 12 HELIX 8 8 ASN A 540 GLY A 552 1 13 HELIX 9 9 LEU A 561 HIS A 563 5 3 HELIX 10 10 GLU A 564 GLN A 574 1 11 HELIX 11 11 ASP A 587 ALA A 594 1 8 HELIX 12 12 ARG A 621 LYS A 632 1 12 SHEET 1 A 6 ASP A 555 PHE A 557 0 SHEET 2 A 6 LYS A 532 LEU A 536 1 N MET A 535 O PHE A 557 SHEET 3 A 6 ALA A 385 ASP A 389 1 N VAL A 386 O LYS A 532 SHEET 4 A 6 THR A 578 GLY A 582 1 O ALA A 579 N ILE A 387 SHEET 5 A 6 VAL A 596 ALA A 599 1 O ILE A 598 N MET A 580 SHEET 6 A 6 ILE A 613 VAL A 614 1 O ILE A 613 N ALA A 599 SHEET 1 B 6 THR A 395 GLY A 406 0 SHEET 2 B 6 GLU A 504 ILE A 515 -1 O ARG A 514 N GLU A 396 SHEET 3 B 6 THR A 495 LYS A 501 -1 N ILE A 499 O SER A 506 SHEET 4 B 6 ARG A 465 VAL A 470 -1 N VAL A 470 O PHE A 498 SHEET 5 B 6 GLY A 457 VAL A 462 -1 N VAL A 458 O VAL A 469 SHEET 6 B 6 GLU A 448 ILE A 453 -1 N GLU A 448 O ILE A 461 SITE 1 AC1 7 HOH A 41 ASP A 389 LYS A 390 THR A 391 SITE 2 AC1 7 THR A 537 GLY A 538 LYS A 565 SITE 1 AC2 4 ASP A 555 TYR A 556 PHE A 557 ALA A 558 CRYST1 35.761 62.909 106.539 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027963 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015896 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009386 0.00000