data_3SLQ # _entry.id 3SLQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SLQ pdb_00003slq 10.2210/pdb3slq/pdb NDB NA1200 ? ? RCSB RCSB066357 ? ? WWPDB D_1000066357 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-17 2 'Structure model' 1 1 2011-10-26 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3SLQ _pdbx_database_status.recvd_initial_deposition_date 2011-06-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SKZ . unspecified PDB 3SLM . unspecified PDB 3SKI . unspecified PDB 3SKW . unspecified PDB 3SKT . unspecified PDB 3SKL . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pikovskaya, O.' 1 'Polonskaia, A.' 2 'Patel, D.J.' 3 'Serganov, A.' 4 # _citation.id primary _citation.title ;Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch. ; _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 7 _citation.page_first 748 _citation.page_last 755 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21841796 _citation.pdbx_database_id_DOI 10.1038/nchembio.631 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pikovskaya, O.' 1 ? primary 'Polonskaia, A.' 2 ? primary 'Patel, D.J.' 3 ? primary 'Serganov, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (68-MER)' 22018.873 2 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-MONOPHOSPHATE" 363.221 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 7 ? ? ? ? 4 non-polymer syn 'SUCCINIC ACID' 118.088 1 ? ? ? ? 5 water nat water 18.015 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(GTP)GCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGU(CCC)' _entity_poly.pdbx_seq_one_letter_code_can GGCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGUC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-MONOPHOSPHATE" 5GP 3 'SULFATE ION' SO4 4 'SUCCINIC ACID' SIN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 C n 1 4 C n 1 5 U n 1 6 U n 1 7 A n 1 8 U n 1 9 A n 1 10 C n 1 11 A n 1 12 G n 1 13 G n 1 14 G n 1 15 U n 1 16 A n 1 17 G n 1 18 C n 1 19 A n 1 20 U n 1 21 A n 1 22 A n 1 23 U n 1 24 G n 1 25 G n 1 26 G n 1 27 C n 1 28 U n 1 29 A n 1 30 C n 1 31 U n 1 32 G n 1 33 A n 1 34 C n 1 35 C n 1 36 C n 1 37 C n 1 38 G n 1 39 C n 1 40 C n 1 41 U n 1 42 U n 1 43 C n 1 44 A n 1 45 A n 1 46 A n 1 47 C n 1 48 C n 1 49 U n 1 50 A n 1 51 U n 1 52 U n 1 53 U n 1 54 G n 1 55 G n 1 56 A n 1 57 G n 1 58 A n 1 59 C n 1 60 U n 1 61 A n 1 62 U n 1 63 A n 1 64 A n 1 65 G n 1 66 G n 1 67 U n 1 68 CCC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'in vitro transcribed RNA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5GP non-polymer . "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 22 22 GTP GTP A . n A 1 2 G 2 23 23 G G A . n A 1 3 C 3 24 24 C C A . n A 1 4 C 4 25 25 C C A . n A 1 5 U 5 26 26 U U A . n A 1 6 U 6 27 27 U U A . n A 1 7 A 7 28 28 A A A . n A 1 8 U 8 29 29 U U A . n A 1 9 A 9 30 30 A A A . n A 1 10 C 10 31 31 C C A . n A 1 11 A 11 32 32 A A A . n A 1 12 G 12 33 33 G G A . n A 1 13 G 13 34 34 G G A . n A 1 14 G 14 35 35 G G A . n A 1 15 U 15 36 36 U U A . n A 1 16 A 16 37 37 A A A . n A 1 17 G 17 38 38 G G A . n A 1 18 C 18 39 39 C C A . n A 1 19 A 19 40 40 A A A . n A 1 20 U 20 41 41 U U A . n A 1 21 A 21 42 42 A A A . n A 1 22 A 22 43 43 A A A . n A 1 23 U 23 44 44 U U A . n A 1 24 G 24 45 45 G G A . n A 1 25 G 25 46 46 G G A . n A 1 26 G 26 47 47 G G A . n A 1 27 C 27 48 48 C C A . n A 1 28 U 28 49 49 U U A . n A 1 29 A 29 50 50 A A A . n A 1 30 C 30 51 51 C C A . n A 1 31 U 31 52 52 U U A . n A 1 32 G 32 53 53 G G A . n A 1 33 A 33 54 54 A A A . n A 1 34 C 34 55 55 C C A . n A 1 35 C 35 56 56 C C A . n A 1 36 C 36 57 57 C C A . n A 1 37 C 37 58 58 C C A . n A 1 38 G 38 59 59 G G A . n A 1 39 C 39 60 60 C C A . n A 1 40 C 40 61 61 C C A . n A 1 41 U 41 62 62 U U A . n A 1 42 U 42 63 63 U U A . n A 1 43 C 43 64 64 C C A . n A 1 44 A 44 65 65 A A A . n A 1 45 A 45 66 66 A A A . n A 1 46 A 46 67 67 A A A . n A 1 47 C 47 68 68 C C A . n A 1 48 C 48 69 69 C C A . n A 1 49 U 49 70 70 U U A . n A 1 50 A 50 71 71 A A A . n A 1 51 U 51 72 72 U U A . n A 1 52 U 52 73 73 U U A . n A 1 53 U 53 74 74 U U A . n A 1 54 G 54 75 75 G G A . n A 1 55 G 55 76 76 G G A . n A 1 56 A 56 77 77 A A A . n A 1 57 G 57 78 78 G G A . n A 1 58 A 58 79 79 A A A . n A 1 59 C 59 80 80 C C A . n A 1 60 U 60 81 81 U U A . n A 1 61 A 61 82 82 A A A . n A 1 62 U 62 83 83 U U A . n A 1 63 A 63 84 84 A A A . n A 1 64 A 64 85 85 A A A . n A 1 65 G 65 86 86 G G A . n A 1 66 G 66 87 87 G G A . n A 1 67 U 67 88 88 U U A . n A 1 68 CCC 68 89 89 CCC CCC A . n B 1 1 GTP 1 22 22 GTP GTP B . n B 1 2 G 2 23 23 G G B . n B 1 3 C 3 24 24 C C B . n B 1 4 C 4 25 25 C C B . n B 1 5 U 5 26 26 U U B . n B 1 6 U 6 27 27 U U B . n B 1 7 A 7 28 28 A A B . n B 1 8 U 8 29 29 U U B . n B 1 9 A 9 30 30 A A B . n B 1 10 C 10 31 31 C C B . n B 1 11 A 11 32 32 A A B . n B 1 12 G 12 33 33 G G B . n B 1 13 G 13 34 34 G G B . n B 1 14 G 14 35 35 G G B . n B 1 15 U 15 36 36 U U B . n B 1 16 A 16 37 37 A A B . n B 1 17 G 17 38 38 G G B . n B 1 18 C 18 39 39 C C B . n B 1 19 A 19 40 40 A A B . n B 1 20 U 20 41 41 U U B . n B 1 21 A 21 42 42 A A B . n B 1 22 A 22 43 43 A A B . n B 1 23 U 23 44 44 U U B . n B 1 24 G 24 45 45 G G B . n B 1 25 G 25 46 46 G G B . n B 1 26 G 26 47 47 G G B . n B 1 27 C 27 48 48 C C B . n B 1 28 U 28 49 49 U U B . n B 1 29 A 29 50 50 A A B . n B 1 30 C 30 51 51 C C B . n B 1 31 U 31 52 52 U U B . n B 1 32 G 32 53 53 G G B . n B 1 33 A 33 54 54 A A B . n B 1 34 C 34 55 55 C C B . n B 1 35 C 35 56 56 C C B . n B 1 36 C 36 57 57 C C B . n B 1 37 C 37 58 58 C C B . n B 1 38 G 38 59 59 G G B . n B 1 39 C 39 60 60 C C B . n B 1 40 C 40 61 61 C C B . n B 1 41 U 41 62 62 U U B . n B 1 42 U 42 63 63 U U B . n B 1 43 C 43 64 64 C C B . n B 1 44 A 44 65 65 A A B . n B 1 45 A 45 66 66 A A B . n B 1 46 A 46 67 67 A A B . n B 1 47 C 47 68 68 C C B . n B 1 48 C 48 69 69 C C B . n B 1 49 U 49 70 70 U U B . n B 1 50 A 50 71 71 A A B . n B 1 51 U 51 72 72 U U B . n B 1 52 U 52 73 73 U U B . n B 1 53 U 53 74 74 U U B . n B 1 54 G 54 75 75 G G B . n B 1 55 G 55 76 76 G G B . n B 1 56 A 56 77 77 A A B . n B 1 57 G 57 78 78 G G B . n B 1 58 A 58 79 79 A A B . n B 1 59 C 59 80 80 C C B . n B 1 60 U 60 81 81 U U B . n B 1 61 A 61 82 82 A A B . n B 1 62 U 62 83 83 U U B . n B 1 63 A 63 84 84 A A B . n B 1 64 A 64 85 85 A A B . n B 1 65 G 65 86 86 G G B . n B 1 66 G 66 87 87 G G B . n B 1 67 U 67 88 88 U U B . n B 1 68 CCC 68 89 89 CCC CCC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5GP 1 120 120 5GP 5GP A . D 3 SO4 1 211 211 SO4 SO4 A . E 3 SO4 1 212 212 SO4 SO4 A . F 3 SO4 1 216 216 SO4 SO4 A . G 3 SO4 1 229 229 SO4 SO4 A . H 4 SIN 1 301 301 SIN SIN A . I 2 5GP 1 120 120 5GP 5GP B . J 3 SO4 1 214 214 SO4 SO4 B . K 3 SO4 1 217 217 SO4 SO4 B . L 3 SO4 1 219 219 SO4 SO4 B . M 5 HOH 1 90 69 HOH HOH A . M 5 HOH 2 171 171 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B A 54 ? "O4'" ? B A 33 "O4'" 2 1 Y 1 B A 54 ? "C2'" ? B A 33 "C2'" 3 1 Y 1 B A 54 ? "O2'" ? B A 33 "O2'" 4 1 Y 1 B A 54 ? "C1'" ? B A 33 "C1'" 5 1 Y 1 B A 54 ? N9 ? B A 33 N9 6 1 Y 1 B A 54 ? C8 ? B A 33 C8 7 1 Y 1 B A 54 ? N7 ? B A 33 N7 8 1 Y 1 B A 54 ? C5 ? B A 33 C5 9 1 Y 1 B A 54 ? C6 ? B A 33 C6 10 1 Y 1 B A 54 ? N6 ? B A 33 N6 11 1 Y 1 B A 54 ? N1 ? B A 33 N1 12 1 Y 1 B A 54 ? C2 ? B A 33 C2 13 1 Y 1 B A 54 ? N3 ? B A 33 N3 14 1 Y 1 B A 54 ? C4 ? B A 33 C4 15 1 Y 1 B C 55 ? "O4'" ? B C 34 "O4'" 16 1 Y 1 B C 55 ? "C2'" ? B C 34 "C2'" 17 1 Y 1 B C 55 ? "O2'" ? B C 34 "O2'" 18 1 Y 1 B C 55 ? "C1'" ? B C 34 "C1'" 19 1 Y 1 B C 55 ? N1 ? B C 34 N1 20 1 Y 1 B C 55 ? C2 ? B C 34 C2 21 1 Y 1 B C 55 ? O2 ? B C 34 O2 22 1 Y 1 B C 55 ? N3 ? B C 34 N3 23 1 Y 1 B C 55 ? C4 ? B C 34 C4 24 1 Y 1 B C 55 ? N4 ? B C 34 N4 25 1 Y 1 B C 55 ? C5 ? B C 34 C5 26 1 Y 1 B C 55 ? C6 ? B C 34 C6 27 1 Y 1 B C 56 ? "O4'" ? B C 35 "O4'" 28 1 Y 1 B C 56 ? "C2'" ? B C 35 "C2'" 29 1 Y 1 B C 56 ? "O2'" ? B C 35 "O2'" 30 1 Y 1 B C 56 ? "C1'" ? B C 35 "C1'" 31 1 Y 1 B C 56 ? N1 ? B C 35 N1 32 1 Y 1 B C 56 ? C2 ? B C 35 C2 33 1 Y 1 B C 56 ? O2 ? B C 35 O2 34 1 Y 1 B C 56 ? N3 ? B C 35 N3 35 1 Y 1 B C 56 ? C4 ? B C 35 C4 36 1 Y 1 B C 56 ? N4 ? B C 35 N4 37 1 Y 1 B C 56 ? C5 ? B C 35 C5 38 1 Y 1 B C 56 ? C6 ? B C 35 C6 39 1 N 1 A SIN 301 ? C4 ? H SIN 1 C4 40 1 N 1 A SIN 301 ? O3 ? H SIN 1 O3 41 1 N 1 A SIN 301 ? O4 ? H SIN 1 O4 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3SLQ _cell.length_a 34.876 _cell.length_b 48.390 _cell.length_c 228.630 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SLQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3SLQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.1 _exptl_crystal_grow.pdbx_details '0.05 M Na-succinate, ~3.0 M (NH4)2SO4, 0.5 mM spermine and 20 mM MgCl2., VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 5.1' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-04-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.075 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.075 # _reflns.entry_id 3SLQ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.5 _reflns.number_obs 13677 _reflns.number_all 14173 _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs 0.376 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.0 _reflns_shell.pdbx_redundancy 4.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1343 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3SLQ _refine.ls_number_reflns_obs 13571 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.880 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 95.98 _refine.ls_R_factor_obs 0.2419 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2371 _refine.ls_R_factor_R_free 0.2854 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.04 _refine.ls_number_reflns_R_free 1362 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -4.5895 _refine.aniso_B[2][2] 31.4568 _refine.aniso_B[3][3] -26.8672 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.345 _refine.solvent_model_param_bsol 40.196 _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.61 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct Molrep _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.46 _refine.pdbx_overall_phase_error 34.44 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2874 _refine_hist.pdbx_number_atoms_ligand 88 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 2964 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 19.880 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 3291 ? 'X-RAY DIFFRACTION' f_angle_d 1.058 ? ? 5114 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 24.363 ? ? 1645 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.062 ? ? 672 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 138 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.5003 2.5895 1148 0.4171 97.00 0.4939 . . 161 . . . . 'X-RAY DIFFRACTION' . 2.5895 2.6929 1247 0.3842 98.00 0.4281 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.6929 2.8152 1204 0.3580 98.00 0.3855 . . 125 . . . . 'X-RAY DIFFRACTION' . 2.8152 2.9632 1223 0.3192 98.00 0.4026 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.9632 3.1481 1218 0.2763 95.00 0.3045 . . 124 . . . . 'X-RAY DIFFRACTION' . 3.1481 3.3901 1173 0.2637 94.00 0.3406 . . 129 . . . . 'X-RAY DIFFRACTION' . 3.3901 3.7292 1193 0.2464 94.00 0.2822 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.7292 4.2642 1224 0.1934 95.00 0.2313 . . 126 . . . . 'X-RAY DIFFRACTION' . 4.2642 5.3550 1218 0.1764 95.00 0.2236 . . 151 . . . . 'X-RAY DIFFRACTION' . 5.3550 19.8802 1361 0.1765 96.00 0.2020 . . 125 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3SLQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3SLQ _struct.title ;Crystal structure of the 2'- Deoxyguanosine riboswitch bound to guanosine-5'-monophosphate ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SLQ _struct_keywords.pdbx_keywords RNA _struct_keywords.text ;three-way junction, riboswitch, 2'-deoxy guanosine, RNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3SLQ _struct_ref.pdbx_db_accession 3SLQ _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code GGCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGUC _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SLQ A 1 ? 68 ? 3SLQ 22 ? 89 ? 22 89 2 1 3SLQ B 1 ? 68 ? 3SLQ 22 ? 89 ? 22 89 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,M 2 1 B,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GTP 22 A G 23 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale2 covale both ? A U 67 "O3'" ? ? ? 1_555 A CCC 68 P ? ? A U 88 A CCC 89 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? B GTP 22 B G 23 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale4 covale both ? B U 67 "O3'" ? ? ? 1_555 B CCC 68 P ? ? B U 88 B CCC 89 1_555 ? ? ? ? ? ? ? 1.599 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A CCC 68 N3 ? ? A GTP 22 A CCC 89 1_555 ? ? ? ? ? ? 'GTP-CCC PAIR' ? ? ? hydrog2 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 67 O2 ? ? A G 23 A U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 67 N3 ? ? A G 23 A U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 24 A G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 24 A G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 24 A G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 65 N1 ? ? A C 25 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 65 O6 ? ? A C 25 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 65 N2 ? ? A C 25 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 64 N1 ? ? A U 26 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 64 N6 ? ? A U 26 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 63 N1 ? ? A U 27 A A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 63 N6 ? ? A U 27 A A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 62 N3 ? ? A A 28 A U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 62 O4 ? ? A A 28 A U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 61 N1 ? ? A U 29 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 61 N6 ? ? A U 29 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 9 N1 ? ? ? 1_555 A U 60 N3 ? ? A A 30 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 9 N6 ? ? ? 1_555 A U 60 O4 ? ? A A 30 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 38 N1 ? ? A C 31 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 38 O6 ? ? A C 31 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 38 N2 ? ? A C 31 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 11 N3 ? ? ? 1_555 A G 32 N2 ? ? A A 32 A G 53 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 12 N2 ? ? ? 1_555 A G 13 O6 ? ? A G 33 A G 34 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog25 hydrog ? ? A G 12 N2 ? ? ? 1_555 A U 31 O4 ? ? A G 33 A U 52 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog26 hydrog ? ? A G 13 N1 ? ? ? 1_555 A U 31 O2 ? ? A G 34 A U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? A G 13 O6 ? ? ? 1_555 A U 31 N3 ? ? A G 34 A U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 35 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 35 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 35 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 29 N1 ? ? A U 36 A A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 29 N6 ? ? A U 36 A A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 28 N3 ? ? A A 37 A U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 28 O4 ? ? A A 37 A U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 27 N3 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 27 O2 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 27 N4 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 39 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 39 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 39 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A A 21 N1 ? ? ? 1_555 A G 24 N2 ? ? A A 42 A G 45 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog42 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 45 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 45 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 45 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 46 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 46 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 46 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 39 N3 ? ? A G 53 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 39 O2 ? ? A G 53 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 39 N4 ? ? A G 53 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 36 N4 ? ? ? 1_555 A U 60 O2 ? ? A C 57 A U 81 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog52 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 57 N1 ? ? A C 61 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 57 O6 ? ? A C 61 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 57 N2 ? ? A C 61 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A U 41 N3 ? ? ? 1_555 A A 56 N1 ? ? A U 62 A A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A U 41 O4 ? ? ? 1_555 A A 56 N6 ? ? A U 62 A A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A U 42 N3 ? ? ? 1_555 A G 55 O6 ? ? A U 63 A G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog58 hydrog ? ? A U 42 O2 ? ? ? 1_555 A G 55 N1 ? ? A U 63 A G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog59 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 64 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 64 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 64 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A A 44 N1 ? ? ? 1_555 A U 53 N3 ? ? A A 65 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A A 44 N6 ? ? ? 1_555 A U 53 O4 ? ? A A 65 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 52 N3 ? ? A A 66 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 52 O4 ? ? A A 66 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 46 N1 ? ? ? 1_555 A U 51 N3 ? ? A A 67 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A A 46 N6 ? ? ? 1_555 A U 51 O4 ? ? A A 67 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B CCC 68 N3 ? ? B GTP 22 B CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B CCC 68 O2 ? ? B GTP 22 B CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B CCC 68 N4 ? ? B GTP 22 B CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 67 O2 ? ? B G 23 B U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 67 N3 ? ? B G 23 B U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog73 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 66 N1 ? ? B C 24 B G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 66 O6 ? ? B C 24 B G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 66 N2 ? ? B C 24 B G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 65 N1 ? ? B C 25 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 65 O6 ? ? B C 25 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 65 N2 ? ? B C 25 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 64 N1 ? ? B U 26 B A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 64 N6 ? ? B U 26 B A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 63 N1 ? ? B U 27 B A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 63 N6 ? ? B U 27 B A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B A 7 N1 ? ? ? 1_555 B U 62 N3 ? ? B A 28 B U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B A 7 N6 ? ? ? 1_555 B U 62 O4 ? ? B A 28 B U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 61 N1 ? ? B U 29 B A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B U 8 O4 ? ? ? 1_555 B A 61 N6 ? ? B U 29 B A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B A 9 N1 ? ? ? 1_555 B U 60 N3 ? ? B A 30 B U 81 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog88 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 38 N1 ? ? B C 31 B G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 38 O6 ? ? B C 31 B G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 38 N2 ? ? B C 31 B G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B A 11 N1 ? ? ? 1_555 B G 32 N2 ? ? B A 32 B G 53 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog92 hydrog ? ? B G 12 N2 ? ? ? 1_555 B G 13 O6 ? ? B G 33 B G 34 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog93 hydrog ? ? B G 12 N2 ? ? ? 1_555 B U 31 O4 ? ? B G 33 B U 52 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog94 hydrog ? ? B G 13 N1 ? ? ? 1_555 B U 31 O2 ? ? B G 34 B U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog95 hydrog ? ? B G 13 O6 ? ? ? 1_555 B U 31 N3 ? ? B G 34 B U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog96 hydrog ? ? B G 14 O6 ? ? ? 1_555 B A 29 N6 ? ? B G 35 B A 50 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog97 hydrog ? ? B G 14 N1 ? ? ? 1_555 B C 30 N3 ? ? B G 35 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B G 14 N2 ? ? ? 1_555 B C 30 O2 ? ? B G 35 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B G 14 O6 ? ? ? 1_555 B C 30 N4 ? ? B G 35 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B U 15 N3 ? ? ? 1_555 B A 29 N1 ? ? B U 36 B A 50 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog101 hydrog ? ? B A 16 N1 ? ? ? 1_555 B U 28 N3 ? ? B A 37 B U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B A 16 N6 ? ? ? 1_555 B U 28 O4 ? ? B A 37 B U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 27 N3 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 27 O2 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 27 N4 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 39 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 39 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 39 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B A 21 N1 ? ? ? 1_555 B G 24 N2 ? ? B A 42 B G 45 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog110 hydrog ? ? B G 24 N1 ? ? ? 1_555 B C 48 N3 ? ? B G 45 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B G 24 N2 ? ? ? 1_555 B C 48 O2 ? ? B G 45 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 24 O6 ? ? ? 1_555 B C 48 N4 ? ? B G 45 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B G 25 N1 ? ? ? 1_555 B C 47 N3 ? ? B G 46 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B G 25 N2 ? ? ? 1_555 B C 47 O2 ? ? B G 46 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B G 25 O6 ? ? ? 1_555 B C 47 N4 ? ? B G 46 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 39 N3 ? ? B G 53 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 39 O2 ? ? B G 53 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 39 N4 ? ? B G 53 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B C 36 N4 ? ? ? 1_555 B U 60 O2 ? ? B C 57 B U 81 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog120 hydrog ? ? B C 40 N3 ? ? ? 1_555 B G 57 N1 ? ? B C 61 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B C 40 N4 ? ? ? 1_555 B G 57 O6 ? ? B C 61 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B C 40 O2 ? ? ? 1_555 B G 57 N2 ? ? B C 61 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B U 41 N3 ? ? ? 1_555 B A 56 N1 ? ? B U 62 B A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B U 41 O4 ? ? ? 1_555 B A 56 N6 ? ? B U 62 B A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B U 42 N3 ? ? ? 1_555 B G 55 O6 ? ? B U 63 B G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog126 hydrog ? ? B U 42 O2 ? ? ? 1_555 B G 55 N1 ? ? B U 63 B G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog127 hydrog ? ? B C 43 N3 ? ? ? 1_555 B G 54 N1 ? ? B C 64 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 43 N4 ? ? ? 1_555 B G 54 O6 ? ? B C 64 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 43 O2 ? ? ? 1_555 B G 54 N2 ? ? B C 64 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B A 44 N1 ? ? ? 1_555 B U 53 N3 ? ? B A 65 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B A 44 N6 ? ? ? 1_555 B U 53 O4 ? ? B A 65 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B A 45 N1 ? ? ? 1_555 B U 52 N3 ? ? B A 66 B U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B A 45 N6 ? ? ? 1_555 B U 52 O4 ? ? B A 66 B U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B A 46 N1 ? ? ? 1_555 B U 51 N3 ? ? B A 67 B U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B A 46 N6 ? ? ? 1_555 B U 51 O4 ? ? B A 67 B U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 5GP 120 ? 10 'BINDING SITE FOR RESIDUE 5GP A 120' AC2 Software B 5GP 120 ? 9 'BINDING SITE FOR RESIDUE 5GP B 120' AC3 Software A SO4 211 ? 1 'BINDING SITE FOR RESIDUE SO4 A 211' AC4 Software A SO4 212 ? 2 'BINDING SITE FOR RESIDUE SO4 A 212' AC5 Software B SO4 214 ? 2 'BINDING SITE FOR RESIDUE SO4 B 214' AC6 Software A SO4 216 ? 2 'BINDING SITE FOR RESIDUE SO4 A 216' AC7 Software B SO4 217 ? 2 'BINDING SITE FOR RESIDUE SO4 B 217' AC8 Software B SO4 219 ? 3 'BINDING SITE FOR RESIDUE SO4 B 219' AC9 Software A SO4 229 ? 1 'BINDING SITE FOR RESIDUE SO4 A 229' BC1 Software A SIN 301 ? 2 'BINDING SITE FOR RESIDUE SIN A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 A A 9 ? A A 30 . ? 1_555 ? 2 AC1 10 C A 10 ? C A 31 . ? 1_555 ? 3 AC1 10 C A 34 ? C A 55 . ? 1_555 ? 4 AC1 10 C A 36 ? C A 57 . ? 1_555 ? 5 AC1 10 C A 37 ? C A 58 . ? 1_555 ? 6 AC1 10 G A 38 ? G A 59 . ? 1_555 ? 7 AC1 10 C A 59 ? C A 80 . ? 1_555 ? 8 AC1 10 U A 60 ? U A 81 . ? 1_555 ? 9 AC1 10 A A 61 ? A A 82 . ? 1_555 ? 10 AC1 10 U A 62 ? U A 83 . ? 1_555 ? 11 AC2 9 A B 9 ? A B 30 . ? 1_555 ? 12 AC2 9 C B 10 ? C B 31 . ? 1_555 ? 13 AC2 9 C B 36 ? C B 57 . ? 1_555 ? 14 AC2 9 C B 37 ? C B 58 . ? 1_555 ? 15 AC2 9 G B 38 ? G B 59 . ? 1_555 ? 16 AC2 9 C B 59 ? C B 80 . ? 1_555 ? 17 AC2 9 U B 60 ? U B 81 . ? 1_555 ? 18 AC2 9 A B 61 ? A B 82 . ? 1_555 ? 19 AC2 9 U B 62 ? U B 83 . ? 1_555 ? 20 AC3 1 C A 4 ? C A 25 . ? 1_555 ? 21 AC4 2 C A 43 ? C A 64 . ? 1_555 ? 22 AC4 2 A A 44 ? A A 65 . ? 1_555 ? 23 AC5 2 C B 3 ? C B 24 . ? 1_555 ? 24 AC5 2 C B 4 ? C B 25 . ? 1_555 ? 25 AC6 2 C A 18 ? C A 39 . ? 1_555 ? 26 AC6 2 A A 19 ? A A 40 . ? 1_555 ? 27 AC7 2 C B 43 ? C B 64 . ? 1_555 ? 28 AC7 2 A B 44 ? A B 65 . ? 1_555 ? 29 AC8 3 C B 18 ? C B 39 . ? 1_555 ? 30 AC8 3 A B 19 ? A B 40 . ? 1_555 ? 31 AC8 3 U B 20 ? U B 41 . ? 1_555 ? 32 AC9 1 C A 47 ? C A 68 . ? 1_555 ? 33 BC1 2 C A 36 ? C A 57 . ? 1_555 ? 34 BC1 2 C A 37 ? C A 58 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A GTP 22 ? ? "O3'" A GTP 22 ? ? P A G 23 ? ? 129.02 119.70 9.32 1.20 Y 2 1 "O3'" A GTP 22 ? ? P A G 23 ? ? OP2 A G 23 ? ? 132.61 110.50 22.11 1.10 Y 3 1 "O3'" A GTP 22 ? ? P A G 23 ? ? OP1 A G 23 ? ? 84.47 105.20 -20.73 2.20 Y # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GTP 1 A GTP 22 ? G "GUANOSINE-5'-TRIPHOSPHATE" 2 A CCC 68 A CCC 89 ? C ? 3 B GTP 1 B GTP 22 ? G "GUANOSINE-5'-TRIPHOSPHATE" 4 B CCC 68 B CCC 89 ? C ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5GP P P N N 1 5GP O1P O N N 2 5GP O2P O N N 3 5GP O3P O N N 4 5GP "O5'" O N N 5 5GP "C5'" C N N 6 5GP "C4'" C N R 7 5GP "O4'" O N N 8 5GP "C3'" C N S 9 5GP "O3'" O N N 10 5GP "C2'" C N R 11 5GP "O2'" O N N 12 5GP "C1'" C N R 13 5GP N9 N Y N 14 5GP C8 C Y N 15 5GP N7 N Y N 16 5GP C5 C Y N 17 5GP C6 C N N 18 5GP O6 O N N 19 5GP N1 N N N 20 5GP C2 C N N 21 5GP N2 N N N 22 5GP N3 N N N 23 5GP C4 C Y N 24 5GP HOP2 H N N 25 5GP HOP3 H N N 26 5GP "H5'1" H N N 27 5GP "H5'2" H N N 28 5GP "H4'" H N N 29 5GP "H3'" H N N 30 5GP "HO3'" H N N 31 5GP "H2'" H N N 32 5GP "HO2'" H N N 33 5GP "H1'" H N N 34 5GP H8 H N N 35 5GP HN1 H N N 36 5GP HN21 H N N 37 5GP HN22 H N N 38 A OP3 O N N 39 A P P N N 40 A OP1 O N N 41 A OP2 O N N 42 A "O5'" O N N 43 A "C5'" C N N 44 A "C4'" C N R 45 A "O4'" O N N 46 A "C3'" C N S 47 A "O3'" O N N 48 A "C2'" C N R 49 A "O2'" O N N 50 A "C1'" C N R 51 A N9 N Y N 52 A C8 C Y N 53 A N7 N Y N 54 A C5 C Y N 55 A C6 C Y N 56 A N6 N N N 57 A N1 N Y N 58 A C2 C Y N 59 A N3 N Y N 60 A C4 C Y N 61 A HOP3 H N N 62 A HOP2 H N N 63 A "H5'" H N N 64 A "H5''" H N N 65 A "H4'" H N N 66 A "H3'" H N N 67 A "HO3'" H N N 68 A "H2'" H N N 69 A "HO2'" H N N 70 A "H1'" H N N 71 A H8 H N N 72 A H61 H N N 73 A H62 H N N 74 A H2 H N N 75 C OP3 O N N 76 C P P N N 77 C OP1 O N N 78 C OP2 O N N 79 C "O5'" O N N 80 C "C5'" C N N 81 C "C4'" C N R 82 C "O4'" O N N 83 C "C3'" C N S 84 C "O3'" O N N 85 C "C2'" C N R 86 C "O2'" O N N 87 C "C1'" C N R 88 C N1 N N N 89 C C2 C N N 90 C O2 O N N 91 C N3 N N N 92 C C4 C N N 93 C N4 N N N 94 C C5 C N N 95 C C6 C N N 96 C HOP3 H N N 97 C HOP2 H N N 98 C "H5'" H N N 99 C "H5''" H N N 100 C "H4'" H N N 101 C "H3'" H N N 102 C "HO3'" H N N 103 C "H2'" H N N 104 C "HO2'" H N N 105 C "H1'" H N N 106 C H41 H N N 107 C H42 H N N 108 C H5 H N N 109 C H6 H N N 110 CCC PC P N S 111 CCC O1C O N N 112 CCC O2C O N N 113 CCC P P N N 114 CCC OP1 O N N 115 CCC OP2 O N N 116 CCC OP3 O N N 117 CCC "O5'" O N N 118 CCC "C5'" C N N 119 CCC "C4'" C N R 120 CCC "O4'" O N N 121 CCC "C3'" C N R 122 CCC "O3'" O N N 123 CCC "C2'" C N R 124 CCC "O2'" O N N 125 CCC "C1'" C N R 126 CCC N1 N N N 127 CCC C2 C N N 128 CCC O2 O N N 129 CCC N3 N N N 130 CCC C4 C N N 131 CCC N4 N N N 132 CCC C5 C N N 133 CCC C6 C N N 134 CCC HOC2 H N N 135 CCC HOP2 H N N 136 CCC HOP3 H N N 137 CCC "H5'" H N N 138 CCC "H5''" H N N 139 CCC "H4'" H N N 140 CCC "H3'" H N N 141 CCC "H2'" H N N 142 CCC "H1'" H N N 143 CCC H41 H N N 144 CCC H42 H N N 145 CCC H5 H N N 146 CCC H6 H N N 147 G OP3 O N N 148 G P P N N 149 G OP1 O N N 150 G OP2 O N N 151 G "O5'" O N N 152 G "C5'" C N N 153 G "C4'" C N R 154 G "O4'" O N N 155 G "C3'" C N S 156 G "O3'" O N N 157 G "C2'" C N R 158 G "O2'" O N N 159 G "C1'" C N R 160 G N9 N Y N 161 G C8 C Y N 162 G N7 N Y N 163 G C5 C Y N 164 G C6 C N N 165 G O6 O N N 166 G N1 N N N 167 G C2 C N N 168 G N2 N N N 169 G N3 N N N 170 G C4 C Y N 171 G HOP3 H N N 172 G HOP2 H N N 173 G "H5'" H N N 174 G "H5''" H N N 175 G "H4'" H N N 176 G "H3'" H N N 177 G "HO3'" H N N 178 G "H2'" H N N 179 G "HO2'" H N N 180 G "H1'" H N N 181 G H8 H N N 182 G H1 H N N 183 G H21 H N N 184 G H22 H N N 185 GTP PG P N N 186 GTP O1G O N N 187 GTP O2G O N N 188 GTP O3G O N N 189 GTP O3B O N N 190 GTP PB P N N 191 GTP O1B O N N 192 GTP O2B O N N 193 GTP O3A O N N 194 GTP PA P N N 195 GTP O1A O N N 196 GTP O2A O N N 197 GTP "O5'" O N N 198 GTP "C5'" C N N 199 GTP "C4'" C N R 200 GTP "O4'" O N N 201 GTP "C3'" C N S 202 GTP "O3'" O N N 203 GTP "C2'" C N R 204 GTP "O2'" O N N 205 GTP "C1'" C N R 206 GTP N9 N Y N 207 GTP C8 C Y N 208 GTP N7 N Y N 209 GTP C5 C Y N 210 GTP C6 C N N 211 GTP O6 O N N 212 GTP N1 N N N 213 GTP C2 C N N 214 GTP N2 N N N 215 GTP N3 N N N 216 GTP C4 C Y N 217 GTP HOG2 H N N 218 GTP HOG3 H N N 219 GTP HOB2 H N N 220 GTP HOA2 H N N 221 GTP "H5'" H N N 222 GTP "H5''" H N N 223 GTP "H4'" H N N 224 GTP "H3'" H N N 225 GTP "HO3'" H N N 226 GTP "H2'" H N N 227 GTP "HO2'" H N N 228 GTP "H1'" H N N 229 GTP H8 H N N 230 GTP HN1 H N N 231 GTP HN21 H N N 232 GTP HN22 H N N 233 HOH O O N N 234 HOH H1 H N N 235 HOH H2 H N N 236 SIN C1 C N N 237 SIN O1 O N N 238 SIN O2 O N N 239 SIN C2 C N N 240 SIN C3 C N N 241 SIN C4 C N N 242 SIN O3 O N N 243 SIN O4 O N N 244 SIN HO2 H N N 245 SIN H21 H N N 246 SIN H22 H N N 247 SIN H31 H N N 248 SIN H32 H N N 249 SIN HO4 H N N 250 SO4 S S N N 251 SO4 O1 O N N 252 SO4 O2 O N N 253 SO4 O3 O N N 254 SO4 O4 O N N 255 U OP3 O N N 256 U P P N N 257 U OP1 O N N 258 U OP2 O N N 259 U "O5'" O N N 260 U "C5'" C N N 261 U "C4'" C N R 262 U "O4'" O N N 263 U "C3'" C N S 264 U "O3'" O N N 265 U "C2'" C N R 266 U "O2'" O N N 267 U "C1'" C N R 268 U N1 N N N 269 U C2 C N N 270 U O2 O N N 271 U N3 N N N 272 U C4 C N N 273 U O4 O N N 274 U C5 C N N 275 U C6 C N N 276 U HOP3 H N N 277 U HOP2 H N N 278 U "H5'" H N N 279 U "H5''" H N N 280 U "H4'" H N N 281 U "H3'" H N N 282 U "HO3'" H N N 283 U "H2'" H N N 284 U "HO2'" H N N 285 U "H1'" H N N 286 U H3 H N N 287 U H5 H N N 288 U H6 H N N 289 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5GP P O1P doub N N 1 5GP P O2P sing N N 2 5GP P O3P sing N N 3 5GP P "O5'" sing N N 4 5GP O2P HOP2 sing N N 5 5GP O3P HOP3 sing N N 6 5GP "O5'" "C5'" sing N N 7 5GP "C5'" "C4'" sing N N 8 5GP "C5'" "H5'1" sing N N 9 5GP "C5'" "H5'2" sing N N 10 5GP "C4'" "O4'" sing N N 11 5GP "C4'" "C3'" sing N N 12 5GP "C4'" "H4'" sing N N 13 5GP "O4'" "C1'" sing N N 14 5GP "C3'" "O3'" sing N N 15 5GP "C3'" "C2'" sing N N 16 5GP "C3'" "H3'" sing N N 17 5GP "O3'" "HO3'" sing N N 18 5GP "C2'" "O2'" sing N N 19 5GP "C2'" "C1'" sing N N 20 5GP "C2'" "H2'" sing N N 21 5GP "O2'" "HO2'" sing N N 22 5GP "C1'" N9 sing N N 23 5GP "C1'" "H1'" sing N N 24 5GP N9 C8 sing Y N 25 5GP N9 C4 sing Y N 26 5GP C8 N7 doub Y N 27 5GP C8 H8 sing N N 28 5GP N7 C5 sing Y N 29 5GP C5 C6 sing N N 30 5GP C5 C4 doub Y N 31 5GP C6 O6 doub N N 32 5GP C6 N1 sing N N 33 5GP N1 C2 sing N N 34 5GP N1 HN1 sing N N 35 5GP C2 N2 sing N N 36 5GP C2 N3 doub N N 37 5GP N2 HN21 sing N N 38 5GP N2 HN22 sing N N 39 5GP N3 C4 sing N N 40 A OP3 P sing N N 41 A OP3 HOP3 sing N N 42 A P OP1 doub N N 43 A P OP2 sing N N 44 A P "O5'" sing N N 45 A OP2 HOP2 sing N N 46 A "O5'" "C5'" sing N N 47 A "C5'" "C4'" sing N N 48 A "C5'" "H5'" sing N N 49 A "C5'" "H5''" sing N N 50 A "C4'" "O4'" sing N N 51 A "C4'" "C3'" sing N N 52 A "C4'" "H4'" sing N N 53 A "O4'" "C1'" sing N N 54 A "C3'" "O3'" sing N N 55 A "C3'" "C2'" sing N N 56 A "C3'" "H3'" sing N N 57 A "O3'" "HO3'" sing N N 58 A "C2'" "O2'" sing N N 59 A "C2'" "C1'" sing N N 60 A "C2'" "H2'" sing N N 61 A "O2'" "HO2'" sing N N 62 A "C1'" N9 sing N N 63 A "C1'" "H1'" sing N N 64 A N9 C8 sing Y N 65 A N9 C4 sing Y N 66 A C8 N7 doub Y N 67 A C8 H8 sing N N 68 A N7 C5 sing Y N 69 A C5 C6 sing Y N 70 A C5 C4 doub Y N 71 A C6 N6 sing N N 72 A C6 N1 doub Y N 73 A N6 H61 sing N N 74 A N6 H62 sing N N 75 A N1 C2 sing Y N 76 A C2 N3 doub Y N 77 A C2 H2 sing N N 78 A N3 C4 sing Y N 79 C OP3 P sing N N 80 C OP3 HOP3 sing N N 81 C P OP1 doub N N 82 C P OP2 sing N N 83 C P "O5'" sing N N 84 C OP2 HOP2 sing N N 85 C "O5'" "C5'" sing N N 86 C "C5'" "C4'" sing N N 87 C "C5'" "H5'" sing N N 88 C "C5'" "H5''" sing N N 89 C "C4'" "O4'" sing N N 90 C "C4'" "C3'" sing N N 91 C "C4'" "H4'" sing N N 92 C "O4'" "C1'" sing N N 93 C "C3'" "O3'" sing N N 94 C "C3'" "C2'" sing N N 95 C "C3'" "H3'" sing N N 96 C "O3'" "HO3'" sing N N 97 C "C2'" "O2'" sing N N 98 C "C2'" "C1'" sing N N 99 C "C2'" "H2'" sing N N 100 C "O2'" "HO2'" sing N N 101 C "C1'" N1 sing N N 102 C "C1'" "H1'" sing N N 103 C N1 C2 sing N N 104 C N1 C6 sing N N 105 C C2 O2 doub N N 106 C C2 N3 sing N N 107 C N3 C4 doub N N 108 C C4 N4 sing N N 109 C C4 C5 sing N N 110 C N4 H41 sing N N 111 C N4 H42 sing N N 112 C C5 C6 doub N N 113 C C5 H5 sing N N 114 C C6 H6 sing N N 115 CCC PC O1C doub N N 116 CCC PC O2C sing N N 117 CCC PC "O3'" sing N N 118 CCC PC "O2'" sing N N 119 CCC O2C HOC2 sing N N 120 CCC P OP1 doub N N 121 CCC P OP2 sing N N 122 CCC P OP3 sing N N 123 CCC P "O5'" sing N N 124 CCC OP2 HOP2 sing N N 125 CCC OP3 HOP3 sing N N 126 CCC "O5'" "C5'" sing N N 127 CCC "C5'" "C4'" sing N N 128 CCC "C5'" "H5'" sing N N 129 CCC "C5'" "H5''" sing N N 130 CCC "C4'" "O4'" sing N N 131 CCC "C4'" "C3'" sing N N 132 CCC "C4'" "H4'" sing N N 133 CCC "O4'" "C1'" sing N N 134 CCC "C3'" "O3'" sing N N 135 CCC "C3'" "C2'" sing N N 136 CCC "C3'" "H3'" sing N N 137 CCC "C2'" "O2'" sing N N 138 CCC "C2'" "C1'" sing N N 139 CCC "C2'" "H2'" sing N N 140 CCC "C1'" N1 sing N N 141 CCC "C1'" "H1'" sing N N 142 CCC N1 C2 sing N N 143 CCC N1 C6 sing N N 144 CCC C2 O2 doub N N 145 CCC C2 N3 sing N N 146 CCC N3 C4 doub N N 147 CCC C4 N4 sing N N 148 CCC C4 C5 sing N N 149 CCC N4 H41 sing N N 150 CCC N4 H42 sing N N 151 CCC C5 C6 doub N N 152 CCC C5 H5 sing N N 153 CCC C6 H6 sing N N 154 G OP3 P sing N N 155 G OP3 HOP3 sing N N 156 G P OP1 doub N N 157 G P OP2 sing N N 158 G P "O5'" sing N N 159 G OP2 HOP2 sing N N 160 G "O5'" "C5'" sing N N 161 G "C5'" "C4'" sing N N 162 G "C5'" "H5'" sing N N 163 G "C5'" "H5''" sing N N 164 G "C4'" "O4'" sing N N 165 G "C4'" "C3'" sing N N 166 G "C4'" "H4'" sing N N 167 G "O4'" "C1'" sing N N 168 G "C3'" "O3'" sing N N 169 G "C3'" "C2'" sing N N 170 G "C3'" "H3'" sing N N 171 G "O3'" "HO3'" sing N N 172 G "C2'" "O2'" sing N N 173 G "C2'" "C1'" sing N N 174 G "C2'" "H2'" sing N N 175 G "O2'" "HO2'" sing N N 176 G "C1'" N9 sing N N 177 G "C1'" "H1'" sing N N 178 G N9 C8 sing Y N 179 G N9 C4 sing Y N 180 G C8 N7 doub Y N 181 G C8 H8 sing N N 182 G N7 C5 sing Y N 183 G C5 C6 sing N N 184 G C5 C4 doub Y N 185 G C6 O6 doub N N 186 G C6 N1 sing N N 187 G N1 C2 sing N N 188 G N1 H1 sing N N 189 G C2 N2 sing N N 190 G C2 N3 doub N N 191 G N2 H21 sing N N 192 G N2 H22 sing N N 193 G N3 C4 sing N N 194 GTP PG O1G doub N N 195 GTP PG O2G sing N N 196 GTP PG O3G sing N N 197 GTP PG O3B sing N N 198 GTP O2G HOG2 sing N N 199 GTP O3G HOG3 sing N N 200 GTP O3B PB sing N N 201 GTP PB O1B doub N N 202 GTP PB O2B sing N N 203 GTP PB O3A sing N N 204 GTP O2B HOB2 sing N N 205 GTP O3A PA sing N N 206 GTP PA O1A doub N N 207 GTP PA O2A sing N N 208 GTP PA "O5'" sing N N 209 GTP O2A HOA2 sing N N 210 GTP "O5'" "C5'" sing N N 211 GTP "C5'" "C4'" sing N N 212 GTP "C5'" "H5'" sing N N 213 GTP "C5'" "H5''" sing N N 214 GTP "C4'" "O4'" sing N N 215 GTP "C4'" "C3'" sing N N 216 GTP "C4'" "H4'" sing N N 217 GTP "O4'" "C1'" sing N N 218 GTP "C3'" "O3'" sing N N 219 GTP "C3'" "C2'" sing N N 220 GTP "C3'" "H3'" sing N N 221 GTP "O3'" "HO3'" sing N N 222 GTP "C2'" "O2'" sing N N 223 GTP "C2'" "C1'" sing N N 224 GTP "C2'" "H2'" sing N N 225 GTP "O2'" "HO2'" sing N N 226 GTP "C1'" N9 sing N N 227 GTP "C1'" "H1'" sing N N 228 GTP N9 C8 sing Y N 229 GTP N9 C4 sing Y N 230 GTP C8 N7 doub Y N 231 GTP C8 H8 sing N N 232 GTP N7 C5 sing Y N 233 GTP C5 C6 sing N N 234 GTP C5 C4 doub Y N 235 GTP C6 O6 doub N N 236 GTP C6 N1 sing N N 237 GTP N1 C2 sing N N 238 GTP N1 HN1 sing N N 239 GTP C2 N2 sing N N 240 GTP C2 N3 doub N N 241 GTP N2 HN21 sing N N 242 GTP N2 HN22 sing N N 243 GTP N3 C4 sing N N 244 HOH O H1 sing N N 245 HOH O H2 sing N N 246 SIN C1 O1 doub N N 247 SIN C1 O2 sing N N 248 SIN C1 C2 sing N N 249 SIN O2 HO2 sing N N 250 SIN C2 C3 sing N N 251 SIN C2 H21 sing N N 252 SIN C2 H22 sing N N 253 SIN C3 C4 sing N N 254 SIN C3 H31 sing N N 255 SIN C3 H32 sing N N 256 SIN C4 O3 doub N N 257 SIN C4 O4 sing N N 258 SIN O4 HO4 sing N N 259 SO4 S O1 doub N N 260 SO4 S O2 doub N N 261 SO4 S O3 sing N N 262 SO4 S O4 sing N N 263 U OP3 P sing N N 264 U OP3 HOP3 sing N N 265 U P OP1 doub N N 266 U P OP2 sing N N 267 U P "O5'" sing N N 268 U OP2 HOP2 sing N N 269 U "O5'" "C5'" sing N N 270 U "C5'" "C4'" sing N N 271 U "C5'" "H5'" sing N N 272 U "C5'" "H5''" sing N N 273 U "C4'" "O4'" sing N N 274 U "C4'" "C3'" sing N N 275 U "C4'" "H4'" sing N N 276 U "O4'" "C1'" sing N N 277 U "C3'" "O3'" sing N N 278 U "C3'" "C2'" sing N N 279 U "C3'" "H3'" sing N N 280 U "O3'" "HO3'" sing N N 281 U "C2'" "O2'" sing N N 282 U "C2'" "C1'" sing N N 283 U "C2'" "H2'" sing N N 284 U "O2'" "HO2'" sing N N 285 U "C1'" N1 sing N N 286 U "C1'" "H1'" sing N N 287 U N1 C2 sing N N 288 U N1 C6 sing N N 289 U C2 O2 doub N N 290 U C2 N3 sing N N 291 U N3 C4 sing N N 292 U N3 H3 sing N N 293 U C4 O4 doub N N 294 U C4 C5 sing N N 295 U C5 C6 doub N N 296 U C5 H5 sing N N 297 U C6 H6 sing N N 298 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3SLQ 'double helix' 3SLQ 'a-form double helix' 3SLQ 'mismatched base pair' 3SLQ 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A CCC 68 1_555 -0.672 0.150 -0.306 -12.964 0.652 8.061 1 A_GTP22:CCC89_A A 22 ? A 89 ? ? 1 1 A G 2 1_555 A U 67 1_555 -2.304 -0.403 0.246 10.162 -11.782 4.770 2 A_G23:U88_A A 23 ? A 88 ? 28 1 1 A C 3 1_555 A G 66 1_555 -0.609 -0.434 0.082 9.683 -11.921 -0.713 3 A_C24:G87_A A 24 ? A 87 ? 19 1 1 A C 4 1_555 A G 65 1_555 0.267 -0.293 0.161 -1.421 -12.702 3.028 4 A_C25:G86_A A 25 ? A 86 ? 19 1 1 A U 5 1_555 A A 64 1_555 -0.649 -0.211 0.321 0.019 -7.472 -0.111 5 A_U26:A85_A A 26 ? A 85 ? 20 1 1 A U 6 1_555 A A 63 1_555 0.189 -0.023 0.066 3.488 -15.217 -3.561 6 A_U27:A84_A A 27 ? A 84 ? 20 1 1 A A 7 1_555 A U 62 1_555 -0.532 0.087 -0.461 -10.914 -24.644 5.648 7 A_A28:U83_A A 28 ? A 83 ? 20 1 1 A U 8 1_555 A A 61 1_555 0.033 -0.122 0.597 -7.014 -11.853 2.274 8 A_U29:A82_A A 29 ? A 82 ? 20 1 1 A A 9 1_555 A U 60 1_555 -0.298 0.245 0.250 10.494 0.751 -2.071 9 A_A30:U81_A A 30 ? A 81 ? 20 1 1 A G 26 1_555 A C 18 1_555 -0.512 -0.166 0.546 -5.361 -5.189 5.546 10 A_G47:C39_A A 47 ? A 39 ? 19 1 1 A C 27 1_555 A G 17 1_555 0.340 -0.224 0.022 7.728 -12.865 -0.551 11 A_C48:G38_A A 48 ? A 38 ? 19 1 1 A U 28 1_555 A A 16 1_555 0.068 -0.146 0.464 3.430 -6.933 0.438 12 A_U49:A37_A A 49 ? A 37 ? 20 1 1 A A 29 1_555 A U 15 1_555 -0.304 -0.073 0.115 3.225 -8.464 8.682 13 A_A50:U36_A A 50 ? A 36 ? 20 1 1 A C 30 1_555 A G 14 1_555 0.574 -0.123 0.344 1.703 -13.313 5.203 14 A_C51:G35_A A 51 ? A 35 ? 19 1 1 A U 31 1_555 A G 13 1_555 2.342 -0.546 -0.070 -10.362 -19.504 5.155 15 A_U52:G34_A A 52 ? A 34 ? 28 1 1 A G 32 1_555 A C 39 1_555 -0.319 -0.203 0.138 6.376 -16.744 -4.698 16 A_G53:C60_A A 53 ? A 60 ? 19 1 1 A C 10 1_555 A G 38 1_555 0.222 -0.071 0.134 7.454 -13.033 1.968 17 A_C31:G59_A A 31 ? A 59 ? 19 1 1 A G 24 1_555 A C 48 1_555 -0.819 -0.044 0.196 -6.408 -2.367 1.241 18 A_G45:C69_A A 45 ? A 69 ? 19 1 1 A G 25 1_555 A C 47 1_555 0.064 0.004 -0.566 -18.065 -20.040 5.844 19 A_G46:C68_A A 46 ? A 68 ? 19 1 1 A U 51 1_555 A A 46 1_555 0.339 -0.008 0.139 -3.059 -6.073 7.329 20 A_U72:A67_A A 72 ? A 67 ? 20 1 1 A U 52 1_555 A A 45 1_555 -0.446 0.154 -0.203 4.414 -11.307 4.173 21 A_U73:A66_A A 73 ? A 66 ? 20 1 1 A U 53 1_555 A A 44 1_555 -0.659 -0.310 -0.348 8.660 -15.161 -0.029 22 A_U74:A65_A A 74 ? A 65 ? 20 1 1 A G 54 1_555 A C 43 1_555 -0.415 -0.572 -0.155 -4.676 -15.152 -4.744 23 A_G75:C64_A A 75 ? A 64 ? 19 1 1 A G 55 1_555 A U 42 1_555 -1.805 -0.500 0.322 -4.309 2.550 -1.093 24 A_G76:U63_A A 76 ? A 63 ? 28 1 1 A A 56 1_555 A U 41 1_555 0.331 0.168 -0.407 1.614 -11.105 3.280 25 A_A77:U62_A A 77 ? A 62 ? 20 1 1 A G 57 1_555 A C 40 1_555 0.364 0.119 -0.221 -2.732 -2.805 4.544 26 A_G78:C61_A A 78 ? A 61 ? 19 1 1 B GTP 1 1_555 B CCC 68 1_555 -0.190 -0.226 -0.259 -9.278 -1.945 -1.155 27 B_GTP22:CCC89_B B 22 ? B 89 ? 19 1 1 B G 2 1_555 B U 67 1_555 -1.900 -0.088 0.536 10.352 -13.189 9.075 28 B_G23:U88_B B 23 ? B 88 ? 28 1 1 B C 3 1_555 B G 66 1_555 0.339 -0.191 0.285 5.423 -21.392 -5.345 29 B_C24:G87_B B 24 ? B 87 ? 19 1 1 B C 4 1_555 B G 65 1_555 0.524 0.026 0.490 -0.921 -14.474 6.551 30 B_C25:G86_B B 25 ? B 86 ? 19 1 1 B U 5 1_555 B A 64 1_555 0.402 -0.230 -0.274 9.679 -17.495 -2.171 31 B_U26:A85_B B 26 ? B 85 ? 20 1 1 B U 6 1_555 B A 63 1_555 0.131 -0.036 -0.086 4.763 -14.178 2.688 32 B_U27:A84_B B 27 ? B 84 ? 20 1 1 B A 7 1_555 B U 62 1_555 -0.537 0.087 -0.175 -8.974 -25.573 4.369 33 B_A28:U83_B B 28 ? B 83 ? 20 1 1 B U 8 1_555 B A 61 1_555 -0.583 -0.225 -0.432 1.300 -19.893 -6.645 34 B_U29:A82_B B 29 ? B 82 ? 20 1 1 B A 9 1_555 B U 60 1_555 0.148 0.505 0.280 2.076 -5.147 7.169 35 B_A30:U81_B B 30 ? B 81 ? ? ? 1 B G 26 1_555 B C 18 1_555 -0.354 0.002 0.127 -5.492 -6.185 6.401 36 B_G47:C39_B B 47 ? B 39 ? 19 1 1 B C 27 1_555 B G 17 1_555 0.120 -0.062 0.222 4.537 -7.207 3.243 37 B_C48:G38_B B 48 ? B 38 ? 19 1 1 B U 28 1_555 B A 16 1_555 -0.340 0.292 -0.107 3.361 -0.452 3.617 38 B_U49:A37_B B 49 ? B 37 ? 20 1 1 B A 29 1_555 B U 15 1_555 -0.777 0.140 0.011 -12.274 -6.891 13.022 39 B_A50:U36_B B 50 ? B 36 ? ? 1 1 B C 30 1_555 B G 14 1_555 1.056 -0.328 0.800 3.287 -6.447 5.119 40 B_C51:G35_B B 51 ? B 35 ? 19 1 1 B U 31 1_555 B G 13 1_555 3.111 -0.613 0.633 -13.161 -11.078 6.643 41 B_U52:G34_B B 52 ? B 34 ? 28 1 1 B G 32 1_555 B C 39 1_555 -0.819 -0.307 1.069 9.300 -16.397 4.824 42 B_G53:C60_B B 53 ? B 60 ? 19 1 1 B C 10 1_555 B G 38 1_555 -0.571 0.312 0.047 11.096 -14.898 -3.788 43 B_C31:G59_B B 31 ? B 59 ? 19 1 1 B G 24 1_555 B C 48 1_555 -0.341 -0.139 -0.059 -9.650 -3.896 5.677 44 B_G45:C69_B B 45 ? B 69 ? 19 1 1 B G 25 1_555 B C 47 1_555 -0.607 -0.178 -0.097 -8.732 -12.787 2.622 45 B_G46:C68_B B 46 ? B 68 ? 19 1 1 B U 51 1_555 B A 46 1_555 -0.399 0.120 0.117 -9.646 -9.900 12.371 46 B_U72:A67_B B 72 ? B 67 ? 20 1 1 B U 52 1_555 B A 45 1_555 -0.209 -0.012 -0.164 7.681 -2.802 4.392 47 B_U73:A66_B B 73 ? B 66 ? 20 1 1 B U 53 1_555 B A 44 1_555 -0.089 -0.307 -0.234 6.488 -7.867 6.683 48 B_U74:A65_B B 74 ? B 65 ? 20 1 1 B G 54 1_555 B C 43 1_555 -0.537 -0.150 -0.544 -15.658 -23.580 12.313 49 B_G75:C64_B B 75 ? B 64 ? 19 1 1 B G 55 1_555 B U 42 1_555 -1.838 -0.405 -0.099 -9.923 -6.842 8.681 50 B_G76:U63_B B 76 ? B 63 ? 28 1 1 B A 56 1_555 B U 41 1_555 0.876 0.039 0.015 -5.774 -4.448 5.171 51 B_A77:U62_B B 77 ? B 62 ? 20 1 1 B G 57 1_555 B C 40 1_555 0.096 -0.273 0.432 6.066 -7.269 -7.314 52 B_G78:C61_B B 78 ? B 61 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A CCC 68 1_555 A G 2 1_555 A U 67 1_555 -0.202 -1.984 2.541 -4.947 6.442 22.535 -6.251 -0.640 1.908 15.839 12.164 23.936 1 AA_GTP22G23:U88CCC89_AA A 22 ? A 89 ? A 23 ? A 88 ? 1 A G 2 1_555 A U 67 1_555 A C 3 1_555 A G 66 1_555 -0.151 -1.436 3.191 -2.468 6.404 34.230 -3.306 -0.098 2.887 10.747 4.141 34.891 2 AA_G23C24:G87U88_AA A 23 ? A 88 ? A 24 ? A 87 ? 1 A C 3 1_555 A G 66 1_555 A C 4 1_555 A G 65 1_555 0.257 -1.852 3.323 0.564 12.026 40.713 -3.715 -0.302 2.698 16.846 -0.790 42.384 3 AA_C24C25:G86G87_AA A 24 ? A 87 ? A 25 ? A 86 ? 1 A C 4 1_555 A G 65 1_555 A U 5 1_555 A A 64 1_555 -0.164 -1.787 3.114 -1.319 5.691 20.625 -6.841 -0.029 2.539 15.499 3.591 21.428 4 AA_C25U26:A85G86_AA A 25 ? A 86 ? A 26 ? A 85 ? 1 A U 5 1_555 A A 64 1_555 A U 6 1_555 A A 63 1_555 0.013 -1.511 3.189 2.963 5.634 38.781 -2.881 0.313 2.943 8.416 -4.426 39.280 5 AA_U26U27:A84A85_AA A 26 ? A 85 ? A 27 ? A 84 ? 1 A U 6 1_555 A A 63 1_555 A A 7 1_555 A U 62 1_555 0.326 -1.416 3.488 4.844 15.146 26.407 -5.541 0.304 2.370 29.951 -9.579 30.752 6 AA_U27A28:U83A84_AA A 27 ? A 84 ? A 28 ? A 83 ? 1 A A 7 1_555 A U 62 1_555 A U 8 1_555 A A 61 1_555 0.429 -0.990 3.060 -7.735 7.959 33.513 -2.686 -1.730 2.605 13.355 12.979 35.253 7 AA_A28U29:A82U83_AA A 28 ? A 83 ? A 29 ? A 82 ? 1 A U 8 1_555 A A 61 1_555 A A 9 1_555 A U 60 1_555 -0.174 -1.276 2.751 3.866 10.133 28.672 -3.967 0.921 2.146 19.597 -7.478 30.614 8 AA_U29A30:U81A82_AA A 29 ? A 82 ? A 30 ? A 81 ? 1 A G 26 1_555 A C 18 1_555 A C 27 1_555 A G 17 1_555 -0.669 -1.668 2.872 5.134 4.189 33.534 -3.391 1.816 2.524 7.173 -8.791 34.164 9 AA_G47C48:G38C39_AA A 47 ? A 39 ? A 48 ? A 38 ? 1 A C 27 1_555 A G 17 1_555 A U 28 1_555 A A 16 1_555 0.219 -1.471 3.392 -3.311 3.834 30.314 -3.533 -1.068 3.145 7.268 6.276 30.724 10 AA_C48U49:A37G38_AA A 48 ? A 38 ? A 49 ? A 37 ? 1 A U 28 1_555 A A 16 1_555 A A 29 1_555 A U 15 1_555 0.085 -1.257 2.953 2.599 12.713 32.908 -3.648 0.182 2.324 21.432 -4.381 35.308 11 AA_U49A50:U36A37_AA A 49 ? A 37 ? A 50 ? A 36 ? 1 A A 29 1_555 A U 15 1_555 A C 30 1_555 A G 14 1_555 0.092 -1.274 3.223 -3.874 5.145 35.073 -2.796 -0.688 2.986 8.450 6.363 35.641 12 AA_A50C51:G35U36_AA A 50 ? A 36 ? A 51 ? A 35 ? 1 A C 30 1_555 A G 14 1_555 A U 31 1_555 A G 13 1_555 0.461 -1.464 3.466 7.941 6.402 42.072 -2.640 0.184 3.251 8.764 -10.870 43.236 13 AA_C51U52:G34G35_AA A 51 ? A 35 ? A 52 ? A 34 ? 1 A U 31 1_555 A G 13 1_555 A G 32 1_555 A C 39 1_555 2.884 -1.830 2.797 -2.715 9.734 46.277 -2.895 -3.765 2.228 12.215 3.406 47.308 14 AA_U52G53:C60G34_AA A 52 ? A 34 ? A 53 ? A 60 ? 1 A G 32 1_555 A C 39 1_555 A C 10 1_555 A G 38 1_555 -2.051 -0.795 2.957 -7.324 3.946 58.355 -0.999 1.734 3.116 4.025 7.469 58.893 15 AA_G53C31:G59C60_AA A 53 ? A 60 ? A 31 ? A 59 ? 1 A G 24 1_555 A C 48 1_555 A G 25 1_555 A C 47 1_555 0.127 -2.102 3.559 8.411 12.736 32.233 -5.260 0.995 2.531 21.499 -14.199 35.577 16 AA_G45G46:C68C69_AA A 45 ? A 69 ? A 46 ? A 68 ? 1 A G 25 1_555 A C 47 1_555 A U 51 1_555 A A 46 1_555 -1.091 -2.480 2.857 -7.133 2.307 27.811 -5.446 0.782 2.833 4.692 14.509 28.785 17 AA_G46U72:A67C68_AA A 46 ? A 68 ? A 72 ? A 67 ? 1 A U 51 1_555 A A 46 1_555 A U 52 1_555 A A 45 1_555 -1.187 -0.765 2.867 -3.096 2.064 30.202 -1.823 1.713 2.914 3.943 5.913 30.425 18 AA_U72U73:A66A67_AA A 72 ? A 67 ? A 73 ? A 66 ? 1 A U 52 1_555 A A 45 1_555 A U 53 1_555 A A 44 1_555 0.573 -1.696 3.224 0.464 5.993 26.303 -5.061 -1.119 2.785 12.956 -1.003 26.969 19 AA_U73U74:A65A66_AA A 73 ? A 66 ? A 74 ? A 65 ? 1 A U 53 1_555 A A 44 1_555 A G 54 1_555 A C 43 1_555 -0.383 -1.655 3.553 -2.656 14.908 34.075 -4.565 0.250 2.647 24.024 4.280 37.197 20 AA_U74G75:C64A65_AA A 74 ? A 65 ? A 75 ? A 64 ? 1 A G 54 1_555 A C 43 1_555 A G 55 1_555 A U 42 1_555 0.053 -2.220 3.067 -6.014 4.132 26.911 -5.486 -1.384 2.629 8.678 12.630 27.866 21 AA_G75G76:U63C64_AA A 75 ? A 64 ? A 76 ? A 63 ? 1 A G 55 1_555 A U 42 1_555 A A 56 1_555 A U 41 1_555 0.199 -1.319 3.285 8.146 1.400 37.082 -2.208 0.739 3.206 2.168 -12.618 37.961 22 AA_G76A77:U62U63_AA A 76 ? A 63 ? A 77 ? A 62 ? 1 A A 56 1_555 A U 41 1_555 A G 57 1_555 A C 40 1_555 0.849 -2.136 3.229 0.795 13.333 28.936 -5.978 -1.426 2.089 25.066 -1.494 31.810 23 AA_A77G78:C61U62_AA A 77 ? A 62 ? A 78 ? A 61 ? 1 B GTP 1 1_555 B CCC 68 1_555 B G 2 1_555 B U 67 1_555 0.109 -1.975 2.557 -5.964 5.207 23.653 -5.690 -1.528 1.996 12.270 14.053 24.925 24 BB_GTP22G23:U88CCC89_BB B 22 ? B 89 ? B 23 ? B 88 ? 1 B G 2 1_555 B U 67 1_555 B C 3 1_555 B G 66 1_555 -0.244 -1.598 3.249 0.248 7.237 39.538 -3.110 0.383 2.922 10.590 -0.363 40.169 25 BB_G23C24:G87U88_BB B 23 ? B 88 ? B 24 ? B 87 ? 1 B C 3 1_555 B G 66 1_555 B C 4 1_555 B G 65 1_555 0.444 -1.952 3.211 -0.589 7.199 32.718 -4.478 -0.860 2.723 12.590 1.031 33.484 26 BB_C24C25:G86G87_BB B 24 ? B 87 ? B 25 ? B 86 ? 1 B C 4 1_555 B G 65 1_555 B U 5 1_555 B A 64 1_555 -0.868 -1.518 2.861 5.974 6.846 27.702 -4.206 2.763 2.199 13.835 -12.072 29.126 27 BB_C25U26:A85G86_BB B 25 ? B 86 ? B 26 ? B 85 ? 1 B U 5 1_555 B A 64 1_555 B U 6 1_555 B A 63 1_555 0.348 -1.236 3.417 -1.001 7.661 31.265 -3.598 -0.807 3.025 13.950 1.824 32.183 28 BB_U26U27:A84A85_BB B 26 ? B 85 ? B 27 ? B 84 ? 1 B U 6 1_555 B A 63 1_555 B A 7 1_555 B U 62 1_555 0.409 -1.112 3.389 3.734 18.220 33.310 -3.946 -0.169 2.503 29.134 -5.970 38.022 29 BB_U27A28:U83A84_BB B 27 ? B 84 ? B 28 ? B 83 ? 1 B A 7 1_555 B U 62 1_555 B U 8 1_555 B A 61 1_555 -0.248 -1.056 3.102 2.562 7.583 29.362 -3.389 0.937 2.719 14.621 -4.939 30.410 30 BB_A28U29:A82U83_BB B 28 ? B 83 ? B 29 ? B 82 ? 1 B U 8 1_555 B A 61 1_555 B A 9 1_555 B U 60 1_555 0.872 -1.282 3.368 -1.241 13.425 30.803 -4.310 -1.703 2.567 23.889 2.209 33.559 31 BB_U29A30:U81A82_BB B 29 ? B 82 ? B 30 ? B 81 ? 1 B G 26 1_555 B C 18 1_555 B C 27 1_555 B G 17 1_555 -0.495 -1.744 2.949 -0.760 3.900 31.677 -3.789 0.779 2.731 7.110 1.385 31.919 32 BB_G47C48:G38C39_BB B 47 ? B 39 ? B 48 ? B 38 ? 1 B C 27 1_555 B G 17 1_555 B U 28 1_555 B A 16 1_555 0.211 -1.608 3.181 2.441 3.902 31.065 -3.664 0.042 2.969 7.235 -4.526 31.396 33 BB_C48U49:A37G38_BB B 48 ? B 38 ? B 49 ? B 37 ? 1 B U 28 1_555 B A 16 1_555 B A 29 1_555 B U 15 1_555 0.189 -1.409 3.322 -0.520 15.573 31.825 -4.443 -0.381 2.392 26.507 0.885 35.346 34 BB_U49A50:U36A37_BB B 49 ? B 37 ? B 50 ? B 36 ? 1 B A 29 1_555 B U 15 1_555 B C 30 1_555 B G 14 1_555 0.298 -1.167 2.915 -7.871 1.681 37.995 -1.936 -1.290 2.750 2.547 11.927 38.807 35 BB_A50C51:G35U36_BB B 50 ? B 36 ? B 51 ? B 35 ? 1 B C 30 1_555 B G 14 1_555 B U 31 1_555 B G 13 1_555 0.234 -1.593 3.344 7.101 7.380 45.130 -2.653 0.303 3.062 9.472 -9.114 46.218 36 BB_C51U52:G34G35_BB B 51 ? B 35 ? B 52 ? B 34 ? 1 B U 31 1_555 B G 13 1_555 B G 32 1_555 B C 39 1_555 3.028 -1.812 2.657 -6.228 -0.928 44.277 -2.318 -4.412 2.268 -1.223 8.214 44.700 37 BB_U52G53:C60G34_BB B 52 ? B 34 ? B 53 ? B 60 ? 1 B G 32 1_555 B C 39 1_555 B C 10 1_555 B G 38 1_555 -2.684 -0.705 3.049 -1.536 2.493 51.840 -0.962 2.970 3.087 2.849 1.755 51.917 38 BB_G53C31:G59C60_BB B 53 ? B 60 ? B 31 ? B 59 ? 1 B G 24 1_555 B C 48 1_555 B G 25 1_555 B C 47 1_555 0.033 -2.215 3.241 1.489 8.439 29.413 -5.695 0.203 2.521 16.192 -2.857 30.610 39 BB_G45G46:C68C69_BB B 45 ? B 69 ? B 46 ? B 68 ? 1 B G 25 1_555 B C 47 1_555 B U 51 1_555 B A 46 1_555 -0.901 -2.620 3.311 -3.425 3.663 27.141 -6.367 1.074 3.026 7.722 7.219 27.591 40 BB_G46U72:A67C68_BB B 46 ? B 68 ? B 72 ? B 67 ? 1 B U 51 1_555 B A 46 1_555 B U 52 1_555 B A 45 1_555 -0.927 -0.924 2.758 -4.614 -1.024 31.364 -1.528 0.960 2.889 -1.881 8.474 31.709 41 BB_U72U73:A66A67_BB B 72 ? B 67 ? B 73 ? B 66 ? 1 B U 52 1_555 B A 45 1_555 B U 53 1_555 B A 44 1_555 0.440 -1.710 3.162 0.311 6.066 33.663 -3.792 -0.703 2.823 10.370 -0.531 34.191 42 BB_U73U74:A65A66_BB B 73 ? B 66 ? B 74 ? B 65 ? 1 B U 53 1_555 B A 44 1_555 B G 54 1_555 B C 43 1_555 -0.371 -1.712 3.925 5.638 11.203 28.236 -5.609 1.901 2.924 21.662 -10.902 30.845 43 BB_U74G75:C64A65_BB B 74 ? B 65 ? B 75 ? B 64 ? 1 B G 54 1_555 B C 43 1_555 B G 55 1_555 B U 42 1_555 0.155 -1.324 2.978 -7.072 9.774 25.587 -4.610 -1.692 2.214 20.667 14.955 28.245 44 BB_G75G76:U63C64_BB B 75 ? B 64 ? B 76 ? B 63 ? 1 B G 55 1_555 B U 42 1_555 B A 56 1_555 B U 41 1_555 0.104 -1.511 3.278 0.297 1.931 40.160 -2.416 -0.117 3.206 2.811 -0.432 40.206 45 BB_G76A77:U62U63_BB B 76 ? B 63 ? B 77 ? B 62 ? 1 B A 56 1_555 B U 41 1_555 B G 57 1_555 B C 40 1_555 0.805 -2.145 2.539 1.685 5.729 28.424 -5.186 -1.338 2.118 11.507 -3.384 29.031 46 BB_A77G78:C61U62_BB B 77 ? B 62 ? B 78 ? B 61 ? # _atom_sites.entry_id 3SLQ _atom_sites.fract_transf_matrix[1][1] 0.028673 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020665 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004374 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_