HEADER PROTEIN BINDING 04-JUL-11 3SPW TITLE STRUCTURE OF OSH4P/KES1P IN COMPLEX WITH PHOSPHATIDYLINOSITOL 4- TITLE 2 PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN KES1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OXYSTEROL-BINDING PROTEIN HOMOLOG 4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: KES1, LPI3C, OSH4, P2614, YPL145C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-DE3; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-3 KEYWDS LIPID BINDING PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR V.DELFOSSE,M.DE SAINT-JEAN,D.DOUGUET,B.ANTONNY,G.DRIN,W.BOURGUET REVDAT 3 13-SEP-23 3SPW 1 REMARK SEQADV REVDAT 2 21-DEC-11 3SPW 1 JRNL REVDAT 1 23-NOV-11 3SPW 0 JRNL AUTH M.DE SAINT-JEAN,V.DELFOSSE,D.DOUGUET,G.CHICANNE,B.PAYRASTRE, JRNL AUTH 2 W.BOURGUET,B.ANTONNY,G.DRIN JRNL TITL OSH4P EXCHANGES STEROLS FOR PHOSPHATIDYLINOSITOL 4-PHOSPHATE JRNL TITL 2 BETWEEN LIPID BILAYERS. JRNL REF J.CELL BIOL. V. 195 965 2011 JRNL REFN ISSN 0021-9525 JRNL PMID 22162133 JRNL DOI 10.1083/JCB.201104062 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 30173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1508 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3056 - 5.7788 1.00 2709 143 0.2254 0.2290 REMARK 3 2 5.7788 - 4.5880 1.00 2617 138 0.2019 0.2535 REMARK 3 3 4.5880 - 4.0084 1.00 2627 138 0.1871 0.2225 REMARK 3 4 4.0084 - 3.6421 1.00 2585 136 0.2095 0.2816 REMARK 3 5 3.6421 - 3.3811 1.00 2615 138 0.2293 0.2552 REMARK 3 6 3.3811 - 3.1818 1.00 2612 137 0.2357 0.3012 REMARK 3 7 3.1818 - 3.0225 1.00 2589 137 0.2466 0.3177 REMARK 3 8 3.0225 - 2.8909 1.00 2588 136 0.2643 0.3075 REMARK 3 9 2.8909 - 2.7797 1.00 2561 134 0.2797 0.3149 REMARK 3 10 2.7797 - 2.6838 1.00 2612 137 0.2850 0.3205 REMARK 3 11 2.6838 - 2.5999 1.00 2550 134 0.2899 0.3193 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 40.60 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.21880 REMARK 3 B22 (A**2) : -7.51760 REMARK 3 B33 (A**2) : 9.73640 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.99410 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6321 REMARK 3 ANGLE : 0.596 8583 REMARK 3 CHIRALITY : 0.040 949 REMARK 3 PLANARITY : 0.002 1100 REMARK 3 DIHEDRAL : 12.597 2275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SPW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066505. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9334 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30180 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14600 REMARK 200 FOR THE DATA SET : 6.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.49000 REMARK 200 FOR SHELL : 2.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1ZHW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 250 MM CACL2, 100 MM MES, 16% PEG 20K, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.38000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 TYR A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 TRP A 10 REMARK 465 THR A 11 REMARK 465 SER A 12 REMARK 465 SER A 99 REMARK 465 ARG A 100 REMARK 465 ASN A 101 REMARK 465 GLU A 102 REMARK 465 SER A 103 REMARK 465 LEU A 104 REMARK 465 GLY A 105 REMARK 465 THR A 172 REMARK 465 LYS A 173 REMARK 465 SER A 174 REMARK 465 LEU A 175 REMARK 465 GLU A 204 REMARK 465 GLY A 205 REMARK 465 ILE A 206 REMARK 465 LEU A 207 REMARK 465 VAL A 208 REMARK 465 ALA A 209 REMARK 465 SER A 210 REMARK 465 PRO A 211 REMARK 465 PHE A 212 REMARK 465 GLY A 237 REMARK 465 TYR A 238 REMARK 465 PHE A 239 REMARK 465 SER A 240 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 TYR B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 TRP B 10 REMARK 465 THR B 11 REMARK 465 SER B 12 REMARK 465 PHE B 13 REMARK 465 LEU B 14 REMARK 465 LYS B 15 REMARK 465 SER B 16 REMARK 465 ILE B 17 REMARK 465 ALA B 18 REMARK 465 SER B 19 REMARK 465 SER B 99 REMARK 465 ARG B 100 REMARK 465 ASN B 101 REMARK 465 GLU B 102 REMARK 465 SER B 103 REMARK 465 LEU B 104 REMARK 465 GLY B 105 REMARK 465 SER B 106 REMARK 465 PHE B 171 REMARK 465 THR B 172 REMARK 465 LYS B 173 REMARK 465 SER B 174 REMARK 465 LEU B 175 REMARK 465 GLY B 205 REMARK 465 ILE B 206 REMARK 465 LEU B 207 REMARK 465 VAL B 208 REMARK 465 ALA B 209 REMARK 465 SER B 210 REMARK 465 GLY B 237 REMARK 465 TYR B 238 REMARK 465 PHE B 239 REMARK 465 SER B 240 REMARK 465 GLY B 241 REMARK 465 LEU B 434 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 SER A 16 OG REMARK 470 ILE A 17 CG1 CG2 CD1 REMARK 470 SER A 19 OG REMARK 470 ASN A 21 CG OD1 ND2 REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 SER A 106 OG REMARK 470 GLU A 107 CB CG CD OE1 OE2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 MET A 176 CG SD CE REMARK 470 ILE A 203 CG1 CG2 CD1 REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 GLU A 261 CG CD OE1 OE2 REMARK 470 LYS A 282 CG CD CE NZ REMARK 470 LYS A 283 CG CD CE NZ REMARK 470 GLU A 284 CG CD OE1 OE2 REMARK 470 HIS A 299 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 306 CG CD OE1 OE2 REMARK 470 LYS A 348 CG CD CE NZ REMARK 470 GLU A 349 CG CD OE1 OE2 REMARK 470 GLU A 351 CG CD OE1 OE2 REMARK 470 GLU A 373 CG CD OE1 OE2 REMARK 470 LYS A 380 CG CD CE NZ REMARK 470 ASP A 381 CG OD1 OD2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 GLU A 412 CG CD OE1 OE2 REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 ASN B 21 CG OD1 ND2 REMARK 470 LEU B 24 CG CD1 CD2 REMARK 470 ILE B 33 CG1 CG2 CD1 REMARK 470 GLU B 66 CG CD OE1 OE2 REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 LYS B 109 CG CD CE NZ REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 MET B 176 CG SD CE REMARK 470 LEU B 177 CG CD1 CD2 REMARK 470 ARG B 236 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 242 CG CD CE NZ REMARK 470 LYS B 252 CG CD CE NZ REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 LYS B 260 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 LYS B 276 CG CD CE NZ REMARK 470 ASN B 281 CG OD1 ND2 REMARK 470 LYS B 283 CG CD CE NZ REMARK 470 GLU B 284 CG CD OE1 OE2 REMARK 470 SER B 286 OG REMARK 470 HIS B 299 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 303 CG CD CE NZ REMARK 470 GLU B 306 CG CD OE1 OE2 REMARK 470 LYS B 315 CG CD CE NZ REMARK 470 ILE B 324 CG1 CG2 CD1 REMARK 470 LYS B 325 CG CD CE NZ REMARK 470 LEU B 326 CG CD1 CD2 REMARK 470 ASP B 328 CG OD1 OD2 REMARK 470 PHE B 329 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN B 330 CG OD1 ND2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 LEU B 339 CG CD1 CD2 REMARK 470 LEU B 346 CG CD1 CD2 REMARK 470 ARG B 347 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 348 CG CD CE NZ REMARK 470 GLU B 349 CG CD OE1 OE2 REMARK 470 GLU B 351 CG CD OE1 OE2 REMARK 470 LYS B 353 CG CD CE NZ REMARK 470 ILE B 355 CG1 CG2 CD1 REMARK 470 SER B 356 OG REMARK 470 GLN B 358 CG CD OE1 NE2 REMARK 470 SER B 368 OG REMARK 470 VAL B 369 CG1 CG2 REMARK 470 GLU B 372 CG CD OE1 OE2 REMARK 470 GLU B 373 CG CD OE1 OE2 REMARK 470 LYS B 380 CG CD CE NZ REMARK 470 ASP B 381 CG OD1 OD2 REMARK 470 LYS B 386 CG CD CE NZ REMARK 470 LYS B 407 CG CD CE NZ REMARK 470 LYS B 411 CG CD CE NZ REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 ASP B 413 CG OD1 OD2 REMARK 470 ILE B 417 CG1 CG2 CD1 REMARK 470 GLU B 424 CG CD OE1 OE2 REMARK 470 LYS B 430 CG CD CE NZ REMARK 470 ILE B 432 CG1 CG2 CD1 REMARK 470 VAL B 433 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 16 5.81 -67.93 REMARK 500 ALA A 47 41.62 -151.04 REMARK 500 ASP A 71 86.01 -163.93 REMARK 500 PRO A 72 0.29 -66.56 REMARK 500 LYS A 190 -122.39 59.14 REMARK 500 ALA A 280 -116.91 50.06 REMARK 500 GLU A 285 30.94 -96.03 REMARK 500 PHE A 289 -67.56 -91.82 REMARK 500 LYS A 353 -2.44 -141.67 REMARK 500 THR A 370 66.58 -116.95 REMARK 500 ASP A 381 44.46 -95.13 REMARK 500 ASN A 397 46.20 -80.02 REMARK 500 SER A 416 42.91 -146.70 REMARK 500 ALA B 47 48.05 -152.41 REMARK 500 ASP B 71 86.82 -163.07 REMARK 500 LYS B 190 -114.42 60.31 REMARK 500 ALA B 280 -117.23 52.52 REMARK 500 LYS B 282 67.48 -100.98 REMARK 500 ALA B 293 44.23 -73.04 REMARK 500 GLU B 306 14.66 -69.93 REMARK 500 GLU B 307 17.57 -142.29 REMARK 500 ALA B 352 37.64 -86.93 REMARK 500 LYS B 353 0.99 -158.24 REMARK 500 ARG B 360 -62.85 -90.86 REMARK 500 ASN B 397 41.96 -82.25 REMARK 500 LYS B 411 133.59 -33.37 REMARK 500 LYS B 430 10.25 -141.63 REMARK 500 GLU B 431 -14.99 -146.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 T7M B 435 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T7M A 435 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T7M B 435 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZHZ RELATED DB: PDB REMARK 900 STRUCTURE OF YEAST OXYSTEROL BINDING PROTEIN OSH4 IN COMPLEX WITH REMARK 900 ERGOSTEROL DBREF 3SPW A 1 434 UNP P35844 KES1_YEAST 1 434 DBREF 3SPW B 1 434 UNP P35844 KES1_YEAST 1 434 SEQADV 3SPW GLY A -1 UNP P35844 EXPRESSION TAG SEQADV 3SPW SER A 0 UNP P35844 EXPRESSION TAG SEQADV 3SPW GLY B -1 UNP P35844 EXPRESSION TAG SEQADV 3SPW SER B 0 UNP P35844 EXPRESSION TAG SEQRES 1 A 436 GLY SER MET SER GLN TYR ALA SER SER SER SER TRP THR SEQRES 2 A 436 SER PHE LEU LYS SER ILE ALA SER PHE ASN GLY ASP LEU SEQRES 3 A 436 SER SER LEU SER ALA PRO PRO PHE ILE LEU SER PRO ILE SEQRES 4 A 436 SER LEU THR GLU PHE SER GLN TYR TRP ALA GLU HIS PRO SEQRES 5 A 436 GLU LEU PHE LEU GLU PRO SER PHE ILE ASN ASP ASP ASN SEQRES 6 A 436 TYR LYS GLU HIS CYS LEU ILE ASP PRO GLU VAL GLU SER SEQRES 7 A 436 PRO GLU LEU ALA ARG MET LEU ALA VAL THR LYS TRP PHE SEQRES 8 A 436 ILE SER THR LEU LYS SER GLN TYR CYS SER ARG ASN GLU SEQRES 9 A 436 SER LEU GLY SER GLU LYS LYS PRO LEU ASN PRO PHE LEU SEQRES 10 A 436 GLY GLU LEU PHE VAL GLY LYS TRP GLU ASN LYS GLU HIS SEQRES 11 A 436 PRO GLU PHE GLY GLU THR VAL LEU LEU SER GLU GLN VAL SEQRES 12 A 436 SER HIS HIS PRO PRO VAL THR ALA PHE SER ILE PHE ASN SEQRES 13 A 436 ASP LYS ASN LYS VAL LYS LEU GLN GLY TYR ASN GLN ILE SEQRES 14 A 436 LYS ALA SER PHE THR LYS SER LEU MET LEU THR VAL LYS SEQRES 15 A 436 GLN PHE GLY HIS THR MET LEU ASP ILE LYS ASP GLU SER SEQRES 16 A 436 TYR LEU VAL THR PRO PRO PRO LEU HIS ILE GLU GLY ILE SEQRES 17 A 436 LEU VAL ALA SER PRO PHE VAL GLU LEU GLU GLY LYS SER SEQRES 18 A 436 TYR ILE GLN SER SER THR GLY LEU LEU CYS VAL ILE GLU SEQRES 19 A 436 PHE SER GLY ARG GLY TYR PHE SER GLY LYS LYS ASN SER SEQRES 20 A 436 PHE LYS ALA ARG ILE TYR LYS ASP SER LYS ASP SER LYS SEQRES 21 A 436 ASP LYS GLU LYS ALA LEU TYR THR ILE SER GLY GLN TRP SEQRES 22 A 436 SER GLY SER SER LYS ILE ILE LYS ALA ASN LYS LYS GLU SEQRES 23 A 436 GLU SER ARG LEU PHE TYR ASP ALA ALA ARG ILE PRO ALA SEQRES 24 A 436 GLU HIS LEU ASN VAL LYS PRO LEU GLU GLU GLN HIS PRO SEQRES 25 A 436 LEU GLU SER ARG LYS ALA TRP TYR ASP VAL ALA GLY ALA SEQRES 26 A 436 ILE LYS LEU GLY ASP PHE ASN LEU ILE ALA LYS THR LYS SEQRES 27 A 436 THR GLU LEU GLU GLU THR GLN ARG GLU LEU ARG LYS GLU SEQRES 28 A 436 GLU GLU ALA LYS GLY ILE SER TRP GLN ARG ARG TRP PHE SEQRES 29 A 436 LYS ASP PHE ASP TYR SER VAL THR PRO GLU GLU GLY ALA SEQRES 30 A 436 LEU VAL PRO GLU LYS ASP ASP THR PHE LEU LYS LEU ALA SEQRES 31 A 436 SER ALA LEU ASN LEU SER THR LYS ASN ALA PRO SER GLY SEQRES 32 A 436 THR LEU VAL GLY ASP LYS GLU ASP ARG LYS GLU ASP LEU SEQRES 33 A 436 SER SER ILE HIS TRP ARG PHE GLN ARG GLU LEU TRP ASP SEQRES 34 A 436 GLU GLU LYS GLU ILE VAL LEU SEQRES 1 B 436 GLY SER MET SER GLN TYR ALA SER SER SER SER TRP THR SEQRES 2 B 436 SER PHE LEU LYS SER ILE ALA SER PHE ASN GLY ASP LEU SEQRES 3 B 436 SER SER LEU SER ALA PRO PRO PHE ILE LEU SER PRO ILE SEQRES 4 B 436 SER LEU THR GLU PHE SER GLN TYR TRP ALA GLU HIS PRO SEQRES 5 B 436 GLU LEU PHE LEU GLU PRO SER PHE ILE ASN ASP ASP ASN SEQRES 6 B 436 TYR LYS GLU HIS CYS LEU ILE ASP PRO GLU VAL GLU SER SEQRES 7 B 436 PRO GLU LEU ALA ARG MET LEU ALA VAL THR LYS TRP PHE SEQRES 8 B 436 ILE SER THR LEU LYS SER GLN TYR CYS SER ARG ASN GLU SEQRES 9 B 436 SER LEU GLY SER GLU LYS LYS PRO LEU ASN PRO PHE LEU SEQRES 10 B 436 GLY GLU LEU PHE VAL GLY LYS TRP GLU ASN LYS GLU HIS SEQRES 11 B 436 PRO GLU PHE GLY GLU THR VAL LEU LEU SER GLU GLN VAL SEQRES 12 B 436 SER HIS HIS PRO PRO VAL THR ALA PHE SER ILE PHE ASN SEQRES 13 B 436 ASP LYS ASN LYS VAL LYS LEU GLN GLY TYR ASN GLN ILE SEQRES 14 B 436 LYS ALA SER PHE THR LYS SER LEU MET LEU THR VAL LYS SEQRES 15 B 436 GLN PHE GLY HIS THR MET LEU ASP ILE LYS ASP GLU SER SEQRES 16 B 436 TYR LEU VAL THR PRO PRO PRO LEU HIS ILE GLU GLY ILE SEQRES 17 B 436 LEU VAL ALA SER PRO PHE VAL GLU LEU GLU GLY LYS SER SEQRES 18 B 436 TYR ILE GLN SER SER THR GLY LEU LEU CYS VAL ILE GLU SEQRES 19 B 436 PHE SER GLY ARG GLY TYR PHE SER GLY LYS LYS ASN SER SEQRES 20 B 436 PHE LYS ALA ARG ILE TYR LYS ASP SER LYS ASP SER LYS SEQRES 21 B 436 ASP LYS GLU LYS ALA LEU TYR THR ILE SER GLY GLN TRP SEQRES 22 B 436 SER GLY SER SER LYS ILE ILE LYS ALA ASN LYS LYS GLU SEQRES 23 B 436 GLU SER ARG LEU PHE TYR ASP ALA ALA ARG ILE PRO ALA SEQRES 24 B 436 GLU HIS LEU ASN VAL LYS PRO LEU GLU GLU GLN HIS PRO SEQRES 25 B 436 LEU GLU SER ARG LYS ALA TRP TYR ASP VAL ALA GLY ALA SEQRES 26 B 436 ILE LYS LEU GLY ASP PHE ASN LEU ILE ALA LYS THR LYS SEQRES 27 B 436 THR GLU LEU GLU GLU THR GLN ARG GLU LEU ARG LYS GLU SEQRES 28 B 436 GLU GLU ALA LYS GLY ILE SER TRP GLN ARG ARG TRP PHE SEQRES 29 B 436 LYS ASP PHE ASP TYR SER VAL THR PRO GLU GLU GLY ALA SEQRES 30 B 436 LEU VAL PRO GLU LYS ASP ASP THR PHE LEU LYS LEU ALA SEQRES 31 B 436 SER ALA LEU ASN LEU SER THR LYS ASN ALA PRO SER GLY SEQRES 32 B 436 THR LEU VAL GLY ASP LYS GLU ASP ARG LYS GLU ASP LEU SEQRES 33 B 436 SER SER ILE HIS TRP ARG PHE GLN ARG GLU LEU TRP ASP SEQRES 34 B 436 GLU GLU LYS GLU ILE VAL LEU HET T7M A 435 64 HET T7M B 435 28 HETNAM T7M (2R)-1-(HEPTADECANOYLOXY)-3-{[(R)-HYDROXY{[(1R,2R,3R, HETNAM 2 T7M 4R,5S,6R)-2,3,5,6-TETRAHYDROXY-4-(PHOSPHONOOXY) HETNAM 3 T7M CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPAN-2-YL (5Z,8Z,11Z, HETNAM 4 T7M 14Z)-ICOSA-5,8,11,14-TETRAENOATE HETSYN T7M PHOSPHATIDYLINOSITOL-4-PHOSPHATE FORMUL 3 T7M 2(C46 H82 O16 P2) FORMUL 5 HOH *241(H2 O) HELIX 1 1 PHE A 13 ALA A 18 5 6 HELIX 2 2 ASP A 23 LEU A 27 5 5 HELIX 3 3 PRO A 30 PHE A 32 5 3 HELIX 4 4 THR A 40 ALA A 47 5 8 HELIX 5 5 HIS A 49 GLU A 55 1 7 HELIX 6 6 PRO A 56 ILE A 59 5 4 HELIX 7 7 ASN A 63 CYS A 68 1 6 HELIX 8 8 SER A 76 CYS A 98 1 23 HELIX 9 9 LYS A 255 ALA A 263 5 9 HELIX 10 10 LYS A 282 SER A 286 5 5 HELIX 11 11 PRO A 304 GLN A 308 5 5 HELIX 12 12 GLU A 312 TRP A 317 1 6 HELIX 13 13 TRP A 317 GLY A 327 1 11 HELIX 14 14 ASP A 328 ALA A 352 1 25 HELIX 15 15 ASP A 382 ASN A 392 1 11 HELIX 16 16 GLN A 422 GLU A 428 1 7 HELIX 17 17 ASP B 23 LEU B 27 5 5 HELIX 18 18 PRO B 30 PHE B 32 5 3 HELIX 19 19 THR B 40 ALA B 47 5 8 HELIX 20 20 HIS B 49 GLU B 55 1 7 HELIX 21 21 PRO B 56 ILE B 59 5 4 HELIX 22 22 ASN B 63 CYS B 68 1 6 HELIX 23 23 SER B 76 CYS B 98 1 23 HELIX 24 24 ASP B 253 SER B 257 5 5 HELIX 25 25 ASP B 259 ALA B 263 5 5 HELIX 26 26 PRO B 304 GLN B 308 5 5 HELIX 27 27 GLU B 312 TRP B 317 1 6 HELIX 28 28 TRP B 317 LYS B 325 1 9 HELIX 29 29 ASP B 328 ALA B 352 1 25 HELIX 30 30 ASP B 382 ASN B 392 1 11 HELIX 31 31 ASP B 406 LYS B 411 1 6 HELIX 32 32 GLN B 422 GLU B 428 1 7 SHEET 1 A 2 LEU A 34 SER A 38 0 SHEET 2 A 2 LYS A 109 LEU A 111 1 O LYS A 109 N SER A 35 SHEET 1 B12 LEU A 118 TRP A 123 0 SHEET 2 B12 THR A 134 SER A 142 -1 O LEU A 136 N GLY A 121 SHEET 3 B12 VAL A 147 ASN A 154 -1 O ALA A 149 N GLU A 139 SHEET 4 B12 VAL A 159 SER A 170 -1 O VAL A 159 N ASN A 154 SHEET 5 B12 THR A 178 ILE A 189 -1 O ASP A 188 N LYS A 160 SHEET 6 B12 GLU A 192 VAL A 196 -1 O VAL A 196 N THR A 185 SHEET 7 B12 LYS A 218 SER A 223 -1 O GLN A 222 N LEU A 195 SHEET 8 B12 LEU A 228 SER A 234 -1 O ILE A 231 N SER A 219 SHEET 9 B12 SER A 245 TYR A 251 -1 O TYR A 251 N LEU A 228 SHEET 10 B12 TYR A 265 GLN A 270 -1 O ILE A 267 N ALA A 248 SHEET 11 B12 SER A 274 LYS A 279 -1 O LYS A 276 N SER A 268 SHEET 12 B12 ARG A 287 ASP A 291 -1 O PHE A 289 N SER A 275 SHEET 1 C 2 LEU A 201 HIS A 202 0 SHEET 2 C 2 GLU A 214 LEU A 215 -1 O GLU A 214 N HIS A 202 SHEET 1 D 2 PHE A 362 ASP A 366 0 SHEET 2 D 2 ILE A 417 PHE A 421 -1 O HIS A 418 N PHE A 365 SHEET 1 E13 LEU A 376 VAL A 377 0 SHEET 2 E13 SER B 286 ASP B 291 -1 O SER B 286 N VAL A 377 SHEET 3 E13 SER B 274 LYS B 279 -1 N ILE B 277 O ARG B 287 SHEET 4 E13 TYR B 265 GLN B 270 -1 N SER B 268 O LYS B 276 SHEET 5 E13 SER B 245 TYR B 251 -1 N ALA B 248 O ILE B 267 SHEET 6 E13 LEU B 228 SER B 234 -1 N LEU B 228 O TYR B 251 SHEET 7 E13 LYS B 218 SER B 223 -1 N SER B 219 O ILE B 231 SHEET 8 E13 GLU B 192 THR B 197 -1 N LEU B 195 O GLN B 222 SHEET 9 E13 THR B 178 ILE B 189 -1 N THR B 185 O VAL B 196 SHEET 10 E13 VAL B 159 SER B 170 -1 N LYS B 160 O ASP B 188 SHEET 11 E13 VAL B 147 ASN B 154 -1 N ASN B 154 O VAL B 159 SHEET 12 E13 THR B 134 SER B 142 -1 N GLU B 139 O ALA B 149 SHEET 13 E13 LEU B 118 TRP B 123 -1 N TRP B 123 O THR B 134 SHEET 1 F11 LEU A 376 VAL A 377 0 SHEET 2 F11 SER B 286 ASP B 291 -1 O SER B 286 N VAL A 377 SHEET 3 F11 SER B 274 LYS B 279 -1 N ILE B 277 O ARG B 287 SHEET 4 F11 TYR B 265 GLN B 270 -1 N SER B 268 O LYS B 276 SHEET 5 F11 SER B 245 TYR B 251 -1 N ALA B 248 O ILE B 267 SHEET 6 F11 LEU B 228 SER B 234 -1 N LEU B 228 O TYR B 251 SHEET 7 F11 LYS B 218 SER B 223 -1 N SER B 219 O ILE B 231 SHEET 8 F11 GLU B 192 THR B 197 -1 N LEU B 195 O GLN B 222 SHEET 9 F11 THR B 178 ILE B 189 -1 N THR B 185 O VAL B 196 SHEET 10 F11 LEU B 201 ILE B 203 -1 O LEU B 201 N VAL B 179 SHEET 11 F11 VAL B 213 LEU B 215 -1 O GLU B 214 N HIS B 202 SHEET 1 G 2 LEU B 34 SER B 38 0 SHEET 2 G 2 LYS B 109 LEU B 111 1 O LYS B 109 N SER B 35 SHEET 1 H 2 PHE B 362 ASP B 366 0 SHEET 2 H 2 ILE B 417 PHE B 421 -1 O HIS B 418 N PHE B 365 CISPEP 1 HIS A 144 PRO A 145 0 0.40 CISPEP 2 HIS B 144 PRO B 145 0 1.31 SITE 1 AC1 19 LEU A 24 SER A 25 SER A 26 LEU A 27 SITE 2 AC1 19 SER A 28 ALA A 29 GLN A 96 GLU A 107 SITE 3 AC1 19 LYS A 109 ASN A 112 HIS A 143 HIS A 144 SITE 4 AC1 19 ALA A 169 LYS A 336 GLU A 340 ARG A 344 SITE 5 AC1 19 HOH A 475 HOH A 595 HOH A 614 SITE 1 AC2 12 LEU B 24 SER B 25 SER B 26 LEU B 27 SITE 2 AC2 12 SER B 28 ALA B 29 ASN B 112 HIS B 143 SITE 3 AC2 12 HIS B 144 LYS B 336 ARG B 344 HOH B 461 CRYST1 73.460 54.760 121.860 90.00 91.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013613 0.000000 0.000238 0.00000 SCALE2 0.000000 0.018262 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008207 0.00000