HEADER TRANSCRIPTION REGULATOR 05-JUL-11 3SQN TITLE PUTATIVE MGA FAMILY TRANSCRIPTIONAL REGULATOR FROM ENTEROCOCCUS TITLE 2 FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 STRAIN: V583; SOURCE 5 GENE: EF_3013; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, MGA FAMILY, TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION KEYWDS 3 REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,R.WU,R.JEDRZEJCZAK,S.MOY,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 2 08-NOV-17 3SQN 1 REMARK REVDAT 1 20-JUL-11 3SQN 0 JRNL AUTH J.OSIPIUK,R.WU,R.JEDRZEJCZAK,S.MOY,A.JOACHIMIAK JRNL TITL PUTATIVE MGA FAMILY TRANSCRIPTIONAL REGULATOR FROM JRNL TITL 2 ENTEROCOCCUS FAECALIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 48431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2437 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2744 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7039 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.34000 REMARK 3 B22 (A**2) : -0.66000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.69000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.338 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.263 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.101 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7225 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4835 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9797 ; 1.651 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11791 ; 0.971 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 848 ; 7.347 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 363 ;37.309 ;24.490 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1282 ;19.609 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;19.107 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1118 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7882 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1529 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4254 ; 0.893 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1699 ; 0.183 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6904 ; 1.672 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2971 ; 2.408 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2889 ; 3.892 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 482 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9071 46.2184 111.1611 REMARK 3 T TENSOR REMARK 3 T11: 0.1091 T22: 0.1440 REMARK 3 T33: 0.1592 T12: -0.0033 REMARK 3 T13: -0.0303 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.3007 L22: 0.2498 REMARK 3 L33: 1.9008 L12: -0.0472 REMARK 3 L13: 0.4102 L23: -0.0101 REMARK 3 S TENSOR REMARK 3 S11: 0.0770 S12: -0.0225 S13: -0.0438 REMARK 3 S21: -0.1171 S22: -0.0196 S23: 0.1589 REMARK 3 S31: 0.0958 S32: -0.3327 S33: -0.0573 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 89 B 482 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4582 48.0650 64.2875 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.1835 REMARK 3 T33: 0.3540 T12: -0.0148 REMARK 3 T13: -0.0179 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.9312 L22: 0.5744 REMARK 3 L33: 2.6998 L12: 0.2315 REMARK 3 L13: 1.0989 L23: -0.1938 REMARK 3 S TENSOR REMARK 3 S11: -0.1709 S12: 0.0682 S13: 0.3518 REMARK 3 S21: 0.0940 S22: -0.0466 S23: -0.0661 REMARK 3 S31: -0.3007 S32: 0.3343 S33: 0.2175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3SQN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066531. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48502 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320 REMARK 200 RESOLUTION RANGE LOW (A) : 36.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.62700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M TRIS REMARK 280 -HCL, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.87950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 GLY A 76 REMARK 465 ASN A 77 REMARK 465 ALA A 78 REMARK 465 MSE A 343 REMARK 465 THR A 344 REMARK 465 GLU A 345 REMARK 465 GLN A 346 REMARK 465 ALA A 347 REMARK 465 ALA A 348 REMARK 465 GLU A 349 REMARK 465 ASP A 350 REMARK 465 ASP A 452 REMARK 465 HIS A 453 REMARK 465 LEU A 454 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 TYR B 2 REMARK 465 SER B 3 REMARK 465 MSE B 4 REMARK 465 LEU B 5 REMARK 465 LYS B 6 REMARK 465 ARG B 7 REMARK 465 VAL B 8 REMARK 465 ILE B 9 REMARK 465 THR B 10 REMARK 465 GLU B 11 REMARK 465 LYS B 12 REMARK 465 ASP B 13 REMARK 465 LEU B 14 REMARK 465 LEU B 15 REMARK 465 ARG B 16 REMARK 465 GLN B 17 REMARK 465 ILE B 18 REMARK 465 ARG B 19 REMARK 465 LEU B 20 REMARK 465 LEU B 21 REMARK 465 GLU B 22 REMARK 465 GLN B 23 REMARK 465 LEU B 24 REMARK 465 LEU B 25 REMARK 465 ASN B 26 REMARK 465 VAL B 27 REMARK 465 PRO B 28 REMARK 465 GLN B 29 REMARK 465 LEU B 30 REMARK 465 THR B 31 REMARK 465 ALA B 32 REMARK 465 LYS B 33 REMARK 465 ARG B 34 REMARK 465 LEU B 35 REMARK 465 ALA B 36 REMARK 465 ALA B 37 REMARK 465 GLN B 38 REMARK 465 ILE B 39 REMARK 465 GLN B 40 REMARK 465 THR B 41 REMARK 465 THR B 42 REMARK 465 GLU B 43 REMARK 465 ARG B 44 REMARK 465 THR B 45 REMARK 465 VAL B 46 REMARK 465 PHE B 47 REMARK 465 SER B 48 REMARK 465 ASP B 49 REMARK 465 LEU B 50 REMARK 465 GLN B 51 REMARK 465 TYR B 52 REMARK 465 ILE B 53 REMARK 465 ARG B 54 REMARK 465 SER B 55 REMARK 465 GLN B 56 REMARK 465 LEU B 57 REMARK 465 PRO B 58 REMARK 465 ALA B 59 REMARK 465 ASP B 60 REMARK 465 TRP B 61 REMARK 465 SER B 62 REMARK 465 ILE B 63 REMARK 465 GLU B 64 REMARK 465 THR B 65 REMARK 465 ASP B 66 REMARK 465 SER B 67 REMARK 465 SER B 68 REMARK 465 GLY B 69 REMARK 465 ILE B 70 REMARK 465 ARG B 71 REMARK 465 LEU B 72 REMARK 465 ARG B 73 REMARK 465 ASN B 74 REMARK 465 GLN B 75 REMARK 465 GLY B 76 REMARK 465 ASN B 77 REMARK 465 ALA B 78 REMARK 465 GLN B 79 REMARK 465 THR B 80 REMARK 465 ASN B 81 REMARK 465 GLU B 82 REMARK 465 LEU B 83 REMARK 465 TRP B 84 REMARK 465 SER B 85 REMARK 465 LEU B 86 REMARK 465 PHE B 87 REMARK 465 LEU B 88 REMARK 465 VAL B 117 REMARK 465 SER B 118 REMARK 465 ALA B 305 REMARK 465 ARG B 306 REMARK 465 PRO B 307 REMARK 465 ALA B 347 REMARK 465 ALA B 348 REMARK 465 GLU B 349 REMARK 465 ASP B 350 REMARK 465 LEU B 351 REMARK 465 ALA B 352 REMARK 465 LEU B 451 REMARK 465 ASP B 452 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 395 OG SER A 480 2.05 REMARK 500 NE2 GLN B 386 O HOH B 483 2.12 REMARK 500 O PRO A 450 OH TYR A 460 2.13 REMARK 500 NE2 GLN B 95 OG SER B 115 2.19 REMARK 500 O TYR A 481 OE1 GLU B 415 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 28 46.61 -75.31 REMARK 500 LEU A 35 -41.60 -22.99 REMARK 500 ALA A 36 -26.94 -31.81 REMARK 500 GLN A 40 60.61 65.62 REMARK 500 HIS A 137 35.03 72.49 REMARK 500 SER A 223 -165.00 -171.32 REMARK 500 SER A 229 -36.97 -38.89 REMARK 500 GLU A 371 -70.65 -95.72 REMARK 500 ALA A 393 -79.04 -85.91 REMARK 500 MSE A 396 140.78 -178.47 REMARK 500 LEU A 437 46.94 -92.34 REMARK 500 GLU A 441 -27.61 -39.99 REMARK 500 SER B 93 -84.59 -70.76 REMARK 500 ILE B 94 -73.66 -11.12 REMARK 500 THR B 114 12.32 -65.68 REMARK 500 SER B 115 -61.51 -161.01 REMARK 500 ASP B 175 118.69 -38.46 REMARK 500 GLN B 224 43.56 82.47 REMARK 500 SER B 328 98.61 -174.42 REMARK 500 THR B 344 -9.71 -52.51 REMARK 500 PRO B 373 46.55 -93.31 REMARK 500 ALA B 393 -96.40 59.39 REMARK 500 VAL B 432 -63.34 -27.02 REMARK 500 GLN B 436 31.95 -96.53 REMARK 500 ASN B 448 17.84 -143.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC102126 RELATED DB: TARGETDB DBREF 3SQN A 1 482 UNP Q82ZN7 Q82ZN7_ENTFA 1 482 DBREF 3SQN B 1 482 UNP Q82ZN7 Q82ZN7_ENTFA 1 482 SEQADV 3SQN SER A -2 UNP Q82ZN7 EXPRESSION TAG SEQADV 3SQN ASN A -1 UNP Q82ZN7 EXPRESSION TAG SEQADV 3SQN ALA A 0 UNP Q82ZN7 EXPRESSION TAG SEQADV 3SQN SER B -2 UNP Q82ZN7 EXPRESSION TAG SEQADV 3SQN ASN B -1 UNP Q82ZN7 EXPRESSION TAG SEQADV 3SQN ALA B 0 UNP Q82ZN7 EXPRESSION TAG SEQRES 1 A 485 SER ASN ALA MSE TYR SER MSE LEU LYS ARG VAL ILE THR SEQRES 2 A 485 GLU LYS ASP LEU LEU ARG GLN ILE ARG LEU LEU GLU GLN SEQRES 3 A 485 LEU LEU ASN VAL PRO GLN LEU THR ALA LYS ARG LEU ALA SEQRES 4 A 485 ALA GLN ILE GLN THR THR GLU ARG THR VAL PHE SER ASP SEQRES 5 A 485 LEU GLN TYR ILE ARG SER GLN LEU PRO ALA ASP TRP SER SEQRES 6 A 485 ILE GLU THR ASP SER SER GLY ILE ARG LEU ARG ASN GLN SEQRES 7 A 485 GLY ASN ALA GLN THR ASN GLU LEU TRP SER LEU PHE LEU SEQRES 8 A 485 PRO GLN SER ILE SER ILE GLN LEU LEU LYS GLU LEU LEU SEQRES 9 A 485 PHE THR LYS GLU LEU VAL THR THR SER PHE LEU SER THR SEQRES 10 A 485 SER GLY VAL SER TYR GLU THR LEU LYS ARG HIS ILE LYS SEQRES 11 A 485 LYS MSE ASN GLN ALA LEU ARG ASP PHE HIS LEU THR ILE SEQRES 12 A 485 GLN LEU THR THR MSE THR ILE GLN LEU ILE GLY ALA GLU SEQRES 13 A 485 SER ASN ILE ARG ILE PHE TYR HIS ARG LEU LEU VAL PRO SEQRES 14 A 485 PHE THR HIS ASN ASN TYR PHE PHE ASP ASP TYR SER ILE SEQRES 15 A 485 HIS GLU GLU HIS TYR PHE GLN PHE LEU LYS GLN VAL TYR SEQRES 16 A 485 SER SER GLU LEU THR VAL GLU THR GLU GLU ILE PHE GLY SEQRES 17 A 485 ALA CYS TRP PHE PHE ILE ASN THR ILE ARG ASN LYS ALA SEQRES 18 A 485 ASN CYS ARG VAL SER GLN PHE SER PHE ASP SER LYS ASP SEQRES 19 A 485 VAL LEU PHE GLN LEU TYR GLN PRO SER LEU ALA LYS LEU SEQRES 20 A 485 TYR ALA SER GLU GLY ILE TYR LEU GLN GLY GLU GLU SER SEQRES 21 A 485 PHE PHE ALA PHE PHE CYS PHE LEU GLU SER TRP ASN TYR SEQRES 22 A 485 ASP ASN VAL TYR GLY GLU THR LEU ALA SER ALA LEU HIS SEQRES 23 A 485 THR HIS TYR SER GLN LEU ARG LYS SER LEU GLN GLN PHE SEQRES 24 A 485 VAL THR ASN LEU SER THR GLU GLU ALA ARG PRO ASP LEU SEQRES 25 A 485 ILE GLN THR ASN LEU LEU ASP ASN LEU LEU LEU LEU PHE SEQRES 26 A 485 ILE LYS TYR THR GLU SER PRO THR LEU SER GLU GLN PHE SEQRES 27 A 485 GLN LEU GLU TYR GLN GLU LEU MSE THR GLU GLN ALA ALA SEQRES 28 A 485 GLU ASP LEU ALA LEU SER LYS SER ASN GLN GLU LEU LEU SEQRES 29 A 485 GLU ILE LEU SER ARG TYR THR THR ILE GLU GLU PRO THR SEQRES 30 A 485 TYR PHE LEU SER LEU ALA SER LEU LEU GLU LYS GLN ALA SEQRES 31 A 485 ILE TYR SER ILE GLN ALA GLN THR MSE THR ALA TYR PHE SEQRES 32 A 485 LEU PHE GLN GLY GLU PRO ALA TRP LYS ALA PHE LEU GLN SEQRES 33 A 485 GLN GLU LEU ALA ALA TYR LEU GLY THR ARG VAL LYS LEU SEQRES 34 A 485 GLN ALA ILE GLU TYR VAL GLU LEU SER GLN LEU THR LEU SEQRES 35 A 485 ASN GLU ALA ASP ILE ILE ILE SER ASN PHE PRO LEU ASP SEQRES 36 A 485 HIS LEU ASP LEU PRO VAL PHE TYR LEU SER LEU ILE PRO SEQRES 37 A 485 THR LYS ASN GLU LEU ARG ARG LEU ALA GLU LEU THR LEU SEQRES 38 A 485 HIS SER TYR PHE SEQRES 1 B 485 SER ASN ALA MSE TYR SER MSE LEU LYS ARG VAL ILE THR SEQRES 2 B 485 GLU LYS ASP LEU LEU ARG GLN ILE ARG LEU LEU GLU GLN SEQRES 3 B 485 LEU LEU ASN VAL PRO GLN LEU THR ALA LYS ARG LEU ALA SEQRES 4 B 485 ALA GLN ILE GLN THR THR GLU ARG THR VAL PHE SER ASP SEQRES 5 B 485 LEU GLN TYR ILE ARG SER GLN LEU PRO ALA ASP TRP SER SEQRES 6 B 485 ILE GLU THR ASP SER SER GLY ILE ARG LEU ARG ASN GLN SEQRES 7 B 485 GLY ASN ALA GLN THR ASN GLU LEU TRP SER LEU PHE LEU SEQRES 8 B 485 PRO GLN SER ILE SER ILE GLN LEU LEU LYS GLU LEU LEU SEQRES 9 B 485 PHE THR LYS GLU LEU VAL THR THR SER PHE LEU SER THR SEQRES 10 B 485 SER GLY VAL SER TYR GLU THR LEU LYS ARG HIS ILE LYS SEQRES 11 B 485 LYS MSE ASN GLN ALA LEU ARG ASP PHE HIS LEU THR ILE SEQRES 12 B 485 GLN LEU THR THR MSE THR ILE GLN LEU ILE GLY ALA GLU SEQRES 13 B 485 SER ASN ILE ARG ILE PHE TYR HIS ARG LEU LEU VAL PRO SEQRES 14 B 485 PHE THR HIS ASN ASN TYR PHE PHE ASP ASP TYR SER ILE SEQRES 15 B 485 HIS GLU GLU HIS TYR PHE GLN PHE LEU LYS GLN VAL TYR SEQRES 16 B 485 SER SER GLU LEU THR VAL GLU THR GLU GLU ILE PHE GLY SEQRES 17 B 485 ALA CYS TRP PHE PHE ILE ASN THR ILE ARG ASN LYS ALA SEQRES 18 B 485 ASN CYS ARG VAL SER GLN PHE SER PHE ASP SER LYS ASP SEQRES 19 B 485 VAL LEU PHE GLN LEU TYR GLN PRO SER LEU ALA LYS LEU SEQRES 20 B 485 TYR ALA SER GLU GLY ILE TYR LEU GLN GLY GLU GLU SER SEQRES 21 B 485 PHE PHE ALA PHE PHE CYS PHE LEU GLU SER TRP ASN TYR SEQRES 22 B 485 ASP ASN VAL TYR GLY GLU THR LEU ALA SER ALA LEU HIS SEQRES 23 B 485 THR HIS TYR SER GLN LEU ARG LYS SER LEU GLN GLN PHE SEQRES 24 B 485 VAL THR ASN LEU SER THR GLU GLU ALA ARG PRO ASP LEU SEQRES 25 B 485 ILE GLN THR ASN LEU LEU ASP ASN LEU LEU LEU LEU PHE SEQRES 26 B 485 ILE LYS TYR THR GLU SER PRO THR LEU SER GLU GLN PHE SEQRES 27 B 485 GLN LEU GLU TYR GLN GLU LEU MSE THR GLU GLN ALA ALA SEQRES 28 B 485 GLU ASP LEU ALA LEU SER LYS SER ASN GLN GLU LEU LEU SEQRES 29 B 485 GLU ILE LEU SER ARG TYR THR THR ILE GLU GLU PRO THR SEQRES 30 B 485 TYR PHE LEU SER LEU ALA SER LEU LEU GLU LYS GLN ALA SEQRES 31 B 485 ILE TYR SER ILE GLN ALA GLN THR MSE THR ALA TYR PHE SEQRES 32 B 485 LEU PHE GLN GLY GLU PRO ALA TRP LYS ALA PHE LEU GLN SEQRES 33 B 485 GLN GLU LEU ALA ALA TYR LEU GLY THR ARG VAL LYS LEU SEQRES 34 B 485 GLN ALA ILE GLU TYR VAL GLU LEU SER GLN LEU THR LEU SEQRES 35 B 485 ASN GLU ALA ASP ILE ILE ILE SER ASN PHE PRO LEU ASP SEQRES 36 B 485 HIS LEU ASP LEU PRO VAL PHE TYR LEU SER LEU ILE PRO SEQRES 37 B 485 THR LYS ASN GLU LEU ARG ARG LEU ALA GLU LEU THR LEU SEQRES 38 B 485 HIS SER TYR PHE MODRES 3SQN MSE A 1 MET SELENOMETHIONINE MODRES 3SQN MSE A 4 MET SELENOMETHIONINE MODRES 3SQN MSE A 129 MET SELENOMETHIONINE MODRES 3SQN MSE A 145 MET SELENOMETHIONINE MODRES 3SQN MSE A 396 MET SELENOMETHIONINE MODRES 3SQN MSE B 129 MET SELENOMETHIONINE MODRES 3SQN MSE B 145 MET SELENOMETHIONINE MODRES 3SQN MSE B 343 MET SELENOMETHIONINE MODRES 3SQN MSE B 396 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 4 8 HET MSE A 129 8 HET MSE A 145 8 HET MSE A 396 8 HET MSE B 129 8 HET MSE B 145 8 HET MSE B 343 8 HET MSE B 396 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 3 HOH *39(H2 O) HELIX 1 1 TYR A 2 ILE A 9 1 8 HELIX 2 2 GLU A 11 VAL A 27 1 17 HELIX 3 3 ALA A 32 ARG A 34 5 3 HELIX 4 4 LEU A 35 GLN A 40 1 6 HELIX 5 5 THR A 42 SER A 55 1 14 HELIX 6 6 THR A 80 LEU A 88 1 9 HELIX 7 7 SER A 91 THR A 103 1 13 HELIX 8 8 THR A 108 GLY A 116 1 9 HELIX 9 9 SER A 118 ARG A 134 1 17 HELIX 10 10 ASP A 135 HIS A 137 5 3 HELIX 11 11 ALA A 152 VAL A 165 1 14 HELIX 12 12 PRO A 166 THR A 168 5 3 HELIX 13 13 ASP A 176 SER A 193 1 18 HELIX 14 14 GLU A 201 ALA A 218 1 18 HELIX 15 15 ASP A 231 SER A 247 1 17 HELIX 16 16 GLN A 253 SER A 267 1 15 HELIX 17 17 GLY A 275 HIS A 285 1 11 HELIX 18 18 TYR A 286 ALA A 305 1 20 HELIX 19 19 ARG A 306 THR A 312 5 7 HELIX 20 20 ASN A 313 SER A 328 1 16 HELIX 21 21 SER A 328 GLN A 336 1 9 HELIX 22 22 LEU A 337 TYR A 339 5 3 HELIX 23 23 LEU A 351 LEU A 364 1 14 HELIX 24 24 PRO A 373 SER A 390 1 18 HELIX 25 25 GLU A 405 GLY A 421 1 17 HELIX 26 26 THR A 466 LEU A 476 1 11 HELIX 27 27 THR A 477 TYR A 481 5 5 HELIX 28 28 SER B 91 THR B 103 1 13 HELIX 29 29 THR B 108 GLY B 116 1 9 HELIX 30 30 TYR B 119 ASP B 135 1 17 HELIX 31 31 ALA B 152 VAL B 165 1 14 HELIX 32 32 PRO B 166 ASN B 170 5 5 HELIX 33 33 ASP B 176 SER B 193 1 18 HELIX 34 34 GLU B 201 ALA B 218 1 18 HELIX 35 35 ASP B 231 SER B 247 1 17 HELIX 36 36 GLY B 254 SER B 267 1 14 HELIX 37 37 GLY B 275 GLU B 304 1 30 HELIX 38 38 ASP B 308 THR B 312 5 5 HELIX 39 39 ASN B 313 SER B 328 1 16 HELIX 40 40 SER B 328 GLN B 336 1 9 HELIX 41 41 TYR B 339 GLU B 345 1 7 HELIX 42 42 SER B 356 ARG B 366 1 11 HELIX 43 43 PRO B 373 SER B 390 1 18 HELIX 44 44 GLU B 405 GLY B 421 1 17 HELIX 45 45 GLU B 430 SER B 435 5 6 HELIX 46 46 THR B 466 PHE B 482 1 17 SHEET 1 A 2 TRP A 61 ASP A 66 0 SHEET 2 A 2 GLY A 69 ASN A 74 -1 O ARG A 73 N SER A 62 SHEET 1 B 3 GLU A 105 VAL A 107 0 SHEET 2 B 3 THR A 146 ILE A 150 -1 O ILE A 147 N LEU A 106 SHEET 3 B 3 THR A 139 LEU A 142 -1 N THR A 139 O ILE A 150 SHEET 1 C 4 VAL A 424 ALA A 428 0 SHEET 2 C 4 MSE A 396 LEU A 401 1 N ALA A 398 O LYS A 425 SHEET 3 C 4 ILE A 444 SER A 447 1 O ILE A 446 N TYR A 399 SHEET 4 C 4 VAL A 458 TYR A 460 1 O PHE A 459 N ILE A 445 SHEET 1 D 3 GLU B 105 VAL B 107 0 SHEET 2 D 3 THR B 146 ILE B 150 -1 O ILE B 147 N LEU B 106 SHEET 3 D 3 THR B 139 LEU B 142 -1 N THR B 139 O ILE B 150 SHEET 1 E 4 VAL B 424 ALA B 428 0 SHEET 2 E 4 MSE B 396 LEU B 401 1 N ALA B 398 O LYS B 425 SHEET 3 E 4 ILE B 444 SER B 447 1 O ILE B 446 N TYR B 399 SHEET 4 E 4 VAL B 458 TYR B 460 1 O PHE B 459 N ILE B 445 LINK C MSE A 1 N TYR A 2 1555 1555 1.34 LINK C SER A 3 N MSE A 4 1555 1555 1.33 LINK C MSE A 4 N LEU A 5 1555 1555 1.34 LINK C LYS A 128 N MSE A 129 1555 1555 1.33 LINK C MSE A 129 N ASN A 130 1555 1555 1.32 LINK C THR A 144 N MSE A 145 1555 1555 1.34 LINK C MSE A 145 N THR A 146 1555 1555 1.32 LINK C THR A 395 N MSE A 396 1555 1555 1.32 LINK C MSE A 396 N THR A 397 1555 1555 1.33 LINK C LYS B 128 N MSE B 129 1555 1555 1.32 LINK C MSE B 129 N ASN B 130 1555 1555 1.33 LINK C THR B 144 N MSE B 145 1555 1555 1.33 LINK C MSE B 145 N THR B 146 1555 1555 1.34 LINK C LEU B 342 N MSE B 343 1555 1555 1.33 LINK C MSE B 343 N THR B 344 1555 1555 1.34 LINK C THR B 395 N MSE B 396 1555 1555 1.33 LINK C MSE B 396 N THR B 397 1555 1555 1.33 CRYST1 63.803 101.759 89.902 90.00 96.75 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015673 0.000000 0.001854 0.00000 SCALE2 0.000000 0.009827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011201 0.00000 HETATM 1 N MSE A 1 17.394 53.013 113.725 1.00 67.46 N ANISOU 1 N MSE A 1 8071 8849 8708 397 -178 94 N HETATM 2 CA MSE A 1 18.220 53.627 112.658 1.00 67.72 C ANISOU 2 CA MSE A 1 8213 8783 8732 429 -189 89 C HETATM 3 C MSE A 1 19.310 54.472 113.395 1.00 66.01 C ANISOU 3 C MSE A 1 8076 8489 8513 450 -146 87 C HETATM 4 O MSE A 1 20.353 53.935 113.771 1.00 64.96 O ANISOU 4 O MSE A 1 7973 8309 8401 384 -118 93 O HETATM 5 CB MSE A 1 17.305 54.451 111.713 1.00 69.40 C ANISOU 5 CB MSE A 1 8426 9029 8912 521 -231 80 C HETATM 6 CG MSE A 1 18.009 55.025 110.461 1.00 73.75 C ANISOU 6 CG MSE A 1 9087 9486 9445 547 -251 78 C HETATM 7 SE MSE A 1 17.432 56.848 109.873 0.65 85.28 SE ANISOU 7 SE MSE A 1 10624 10927 10849 699 -280 65 SE HETATM 8 CE MSE A 1 15.530 56.518 109.387 1.00 81.91 C ANISOU 8 CE MSE A 1 10062 10656 10404 759 -334 56 C