HEADER TRANSFERASE 06-JUL-11 3SQZ TITLE CRYSTAL STRUCTURE OF HMG_COA SYNTHASE COMPLEXED WITH COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE HYDROXYMETHYLGLUTARYL-COA SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.3.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 1309; SOURCE 4 STRAIN: UA159; SOURCE 5 GENE: SMU_943C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS THIOLASE FOLD, HMG_COA SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.LIU,T.M.FU,X.LIU,X.D.SU REVDAT 3 01-NOV-23 3SQZ 1 REMARK SEQADV LINK REVDAT 2 05-FEB-14 3SQZ 1 ATOM HETATM REVDAT 1 11-JUL-12 3SQZ 0 JRNL AUTH Y.H.LIU,T.M.FU,X.LIU,X.D.SU JRNL TITL CRYSTAL STRUCTURE OF HMG-COA SYNTHASE FROM STREPTOCOCCUS JRNL TITL 2 MUTANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 117294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.155 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.6013 - 3.7277 0.91 3542 187 0.1674 0.1683 REMARK 3 2 3.7277 - 2.9595 0.99 3814 183 0.1528 0.1702 REMARK 3 3 2.9595 - 2.5856 1.00 3808 199 0.1582 0.1738 REMARK 3 4 2.5856 - 2.3493 1.00 3819 191 0.1479 0.1765 REMARK 3 5 2.3493 - 2.1810 1.00 3772 197 0.1409 0.1423 REMARK 3 6 2.1810 - 2.0524 1.00 3780 220 0.1349 0.1385 REMARK 3 7 2.0524 - 1.9496 1.00 3782 196 0.1348 0.1718 REMARK 3 8 1.9496 - 1.8648 1.00 3783 188 0.1290 0.1586 REMARK 3 9 1.8648 - 1.7930 1.00 3763 223 0.1234 0.1488 REMARK 3 10 1.7930 - 1.7311 1.00 3785 172 0.1203 0.1467 REMARK 3 11 1.7311 - 1.6770 1.00 3758 202 0.1094 0.1306 REMARK 3 12 1.6770 - 1.6291 1.00 3769 217 0.1066 0.1187 REMARK 3 13 1.6291 - 1.5862 0.99 3765 173 0.1055 0.1257 REMARK 3 14 1.5862 - 1.5475 0.99 3763 187 0.1038 0.1342 REMARK 3 15 1.5475 - 1.5123 0.99 3743 195 0.1009 0.1315 REMARK 3 16 1.5123 - 1.4801 0.99 3723 200 0.0990 0.1331 REMARK 3 17 1.4801 - 1.4505 0.99 3767 203 0.1008 0.1317 REMARK 3 18 1.4505 - 1.4231 0.99 3689 208 0.1019 0.1303 REMARK 3 19 1.4231 - 1.3977 0.98 3643 206 0.0992 0.1377 REMARK 3 20 1.3977 - 1.3740 0.98 3725 203 0.1038 0.1171 REMARK 3 21 1.3740 - 1.3519 0.98 3680 200 0.1019 0.1374 REMARK 3 22 1.3519 - 1.3311 0.98 3733 173 0.1037 0.1231 REMARK 3 23 1.3311 - 1.3115 0.98 3662 189 0.1086 0.1395 REMARK 3 24 1.3115 - 1.2930 0.97 3705 169 0.1175 0.1471 REMARK 3 25 1.2930 - 1.2755 0.97 3634 202 0.1286 0.1582 REMARK 3 26 1.2755 - 1.2590 0.97 3632 207 0.1364 0.1624 REMARK 3 27 1.2590 - 1.2432 0.97 3651 187 0.1384 0.1765 REMARK 3 28 1.2432 - 1.2283 0.96 3615 200 0.1510 0.1658 REMARK 3 29 1.2283 - 1.2140 0.96 3604 200 0.1659 0.1987 REMARK 3 30 1.2140 - 1.2003 0.93 3519 189 0.1793 0.2018 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.43 REMARK 3 B_SOL : 57.40 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.99450 REMARK 3 B22 (A**2) : -0.47740 REMARK 3 B33 (A**2) : -2.51700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.39830 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3184 REMARK 3 ANGLE : 1.245 4333 REMARK 3 CHIRALITY : 0.090 495 REMARK 3 PLANARITY : 0.008 545 REMARK 3 DIHEDRAL : 15.936 1221 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SQZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122118 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.190 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.29000 REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3LEH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NA FORMATE, 20% (W/V) REMARK 280 POLYETHYLENE GLYCEROL 3350 , VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.82400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.02900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.82400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.02900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -84.71973 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -59.84551 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 421 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ASN A 389 REMARK 465 GLU A 390 REMARK 465 SER A 391 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 NE CZ NH1 NH2 REMARK 470 GLU A 24 OE1 OE2 REMARK 470 LYS A 35 CE NZ REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 LYS A 70 CE NZ REMARK 470 ASP A 130 CG OD1 OD2 REMARK 470 MET A 199 CG SD CE REMARK 470 LYS A 203 CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 GLU A 258 CG CD OE1 OE2 REMARK 470 GLU A 345 CD OE1 OE2 REMARK 470 LYS A 349 CD CE NZ REMARK 470 LYS A 360 CD CE NZ REMARK 470 LYS A 366 CG CD CE NZ REMARK 470 LYS A 387 CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 TYR A 205 CA REMARK 480 ILE A 247 CA REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 111 CA - CB - SG ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 -167.03 -121.25 REMARK 500 GLU A 109 80.87 -173.60 REMARK 500 ALA A 110 -130.36 45.17 REMARK 500 ALA A 110 -130.36 45.17 REMARK 500 TYR A 278 -115.22 50.26 REMARK 500 HIS A 381 -0.60 78.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 392 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LEH RELATED DB: PDB REMARK 900 APO ENZYME DBREF 3SQZ A 1 391 UNP Q8DUI5 Q8DUI5_STRMU 1 391 SEQADV 3SQZ MET A -33 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -32 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A -31 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A -30 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -29 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -28 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -27 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -26 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -25 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -24 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A -23 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A -22 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -21 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ LEU A -20 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ VAL A -19 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ PRO A -18 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ ARG A -17 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -16 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A -15 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ HIS A -14 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ MET A -13 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ ALA A -12 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A -11 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ MET A -10 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ THR A -9 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -8 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -7 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLN A -6 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLN A -5 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ MET A -4 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -3 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ ARG A -2 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ GLY A -1 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ SER A 0 UNP Q8DUI5 EXPRESSION TAG SEQADV 3SQZ CSD A 111 UNP Q8DUI5 CYS 111 MICROHETEROGENEITY SEQRES 1 A 425 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 425 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 425 GLY GLN GLN MET GLY ARG GLY SER MET ARG ILE GLY ILE SEQRES 4 A 425 ASP LYS ILE GLY PHE THR SER SER GLN TYR VAL LEU ASN SEQRES 5 A 425 MET LYS ASP LEU ALA GLU ALA ARG GLY GLU ASP PRO GLN SEQRES 6 A 425 LYS PHE SER LYS GLY LEU LEU LEU ASN ALA LEU SER ILE SEQRES 7 A 425 ALA PRO ILE THR ASP ASP VAL VAL THR LEU ALA ALA GLY SEQRES 8 A 425 SER ALA ASN GLU ILE LEU THR ALA GLU ASP LYS GLU LYS SEQRES 9 A 425 ILE ASP MET VAL ILE LEU ALA THR GLU SER SER VAL ASP SEQRES 10 A 425 GLN SER LYS ALA GLY ALA VAL TYR VAL HIS SER LEU LEU SEQRES 11 A 425 GLY ILE GLN PRO PHE ALA ARG SER PHE GLU MET LYS GLU SEQRES 12 A 425 ALA CSD TYR SER ALA THR ALA ALA LEU ASN TYR ALA LYS SEQRES 13 A 425 LEU HIS VAL GLU LYS HIS PRO ASP THR ARG VAL LEU VAL SEQRES 14 A 425 LEU ALA SER ASP ILE ALA LYS TYR GLY ILE GLY THR PRO SEQRES 15 A 425 GLY GLU SER THR GLN GLY ALA GLY SER ILE ALA MET LEU SEQRES 16 A 425 VAL LYS LYS ASP PRO ARG ILE LEU ILE LEU HIS ASP GLU SEQRES 17 A 425 THR LEU ALA GLN THR ARG ASP ILE MET ASP PHE TRP ARG SEQRES 18 A 425 PRO ASN TYR THR THR THR PRO TYR VAL ASN GLY MET TYR SEQRES 19 A 425 SER THR LYS GLN TYR LEU ASP MET LEU LYS THR THR TRP SEQRES 20 A 425 ALA GLU TYR GLN LYS ARG PHE ASP VAL SER LEU THR ASP SEQRES 21 A 425 PHE ALA ALA PHE CYS PHE HIS LEU PRO PHE PRO LYS LEU SEQRES 22 A 425 ALA LEU LYS GLY PHE ASN LYS ILE MET ASP LYS GLN VAL SEQRES 23 A 425 PRO SER ASP LEU GLN GLU LYS LEU LYS VAL ASN PHE GLU SEQRES 24 A 425 ALA SER ILE LEU TYR SER LYS GLN ILE GLY ASN ILE TYR SEQRES 25 A 425 THR GLY SER LEU PHE LEU GLY LEU LEU SER LEU LEU GLU SEQRES 26 A 425 ASN SER GLN ASN LEU VAL ALA GLY ASP LYS ILE ALA LEU SEQRES 27 A 425 PHE SER TYR GLY SER GLY ALA VAL ALA GLU ILE PHE THR SEQRES 28 A 425 GLY THR LEU VAL LYS GLY PHE LYS GLU GLN LEU GLN THR SEQRES 29 A 425 ASN ARG LEU ASP LYS LEU LYS ARG ARG THR PRO LEU SER SEQRES 30 A 425 VAL GLU ASN TYR GLU LYS ILE PHE PHE GLU GLU ALA GLN SEQRES 31 A 425 LEU ASP ASP LYS GLY ASN ALA SER PHE LYS GLU TYR GLN SEQRES 32 A 425 THR GLY PRO PHE ALA LEU LYS GLU ILE LEU GLU HIS GLN SEQRES 33 A 425 ARG ILE TYR GLY LYS VAL ASN GLU SER MODRES 3SQZ CSD A 111 CYS 3-SULFINOALANINE HET CSD A 111 8 HET GOL A 392 6 HET GOL A 393 6 HET COA A 601 48 HETNAM CSD 3-SULFINOALANINE HETNAM GOL GLYCEROL HETNAM COA COENZYME A HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSD C3 H7 N O4 S FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 COA C21 H36 N7 O16 P3 S FORMUL 5 HOH *351(H2 O) HELIX 1 1 MET A 19 GLY A 27 1 9 HELIX 2 2 ASP A 29 LYS A 35 1 7 HELIX 3 3 ASP A 50 GLU A 61 1 12 HELIX 4 4 THR A 64 LYS A 70 1 7 HELIX 5 5 ALA A 87 LEU A 96 1 10 HELIX 6 6 TYR A 112 HIS A 128 1 17 HELIX 7 7 THR A 147 GLN A 153 5 7 HELIX 8 8 ASN A 197 ASP A 221 1 25 HELIX 9 9 SER A 223 PHE A 227 5 5 HELIX 10 10 PHE A 236 MET A 248 1 13 HELIX 11 11 PRO A 253 LEU A 269 1 17 HELIX 12 12 TYR A 270 GLY A 275 1 6 HELIX 13 13 ILE A 277 THR A 279 5 3 HELIX 14 14 GLY A 280 SER A 293 1 14 HELIX 15 15 GLY A 323 LEU A 328 5 6 HELIX 16 16 ASN A 331 ARG A 338 1 8 HELIX 17 17 SER A 343 PHE A 352 1 10 SHEET 1 A 8 ARG A 103 MET A 107 0 SHEET 2 A 8 ILE A 71 ALA A 77 1 N VAL A 74 O ARG A 103 SHEET 3 A 8 ARG A 132 ALA A 141 1 O LEU A 136 N ALA A 77 SHEET 4 A 8 GLY A 154 LYS A 164 -1 O VAL A 162 N VAL A 133 SHEET 5 A 8 ILE A 3 THR A 11 -1 N ASP A 6 O LEU A 161 SHEET 6 A 8 LEU A 169 LEU A 171 -1 O LEU A 171 N ILE A 3 SHEET 7 A 8 VAL A 312 LEU A 320 -1 O THR A 319 N ILE A 170 SHEET 8 A 8 LEU A 176 THR A 179 -1 N LEU A 176 O ILE A 315 SHEET 1 B 9 ARG A 103 MET A 107 0 SHEET 2 B 9 ILE A 71 ALA A 77 1 N VAL A 74 O ARG A 103 SHEET 3 B 9 ARG A 132 ALA A 141 1 O LEU A 136 N ALA A 77 SHEET 4 B 9 GLY A 154 LYS A 164 -1 O VAL A 162 N VAL A 133 SHEET 5 B 9 ILE A 3 THR A 11 -1 N ASP A 6 O LEU A 161 SHEET 6 B 9 LEU A 169 LEU A 171 -1 O LEU A 171 N ILE A 3 SHEET 7 B 9 VAL A 312 LEU A 320 -1 O THR A 319 N ILE A 170 SHEET 8 B 9 LYS A 301 GLY A 308 -1 N SER A 306 O GLU A 314 SHEET 9 B 9 ALA A 229 PHE A 232 1 N CYS A 231 O ALA A 303 SHEET 1 C 3 ALA A 41 ILE A 44 0 SHEET 2 C 3 TYR A 15 ASN A 18 -1 N LEU A 17 O LEU A 42 SHEET 3 C 3 THR A 340 PRO A 341 1 O THR A 340 N VAL A 16 SHEET 1 D 2 PHE A 185 TRP A 186 0 SHEET 2 D 2 TYR A 195 VAL A 196 -1 O TYR A 195 N TRP A 186 SHEET 1 E 3 ALA A 363 SER A 364 0 SHEET 2 E 3 PHE A 373 LEU A 379 -1 O ILE A 378 N ALA A 363 SHEET 3 E 3 GLN A 382 LYS A 387 -1 O ILE A 384 N LYS A 376 LINK C ALA A 110 N BCSD A 111 1555 1555 1.33 LINK C BCSD A 111 N TYR A 112 1555 1555 1.40 CISPEP 1 GLY A 310 ALA A 311 0 0.32 SITE 1 AC1 10 PHE A 10 THR A 11 SER A 12 ARG A 332 SITE 2 AC1 10 HOH A 397 HOH A 518 HOH A 592 HOH A 662 SITE 3 AC1 10 HOH A 680 HOH A 729 SITE 1 AC2 7 LYS A 250 VAL A 252 PRO A 253 SER A 254 SITE 2 AC2 7 GLN A 257 LEU A 379 HOH A 744 SITE 1 AC3 25 ASP A 29 GLN A 31 LYS A 32 GLY A 36 SITE 2 AC3 25 TYR A 143 PRO A 148 GLY A 149 SER A 151 SITE 3 AC3 25 THR A 152 PHE A 185 GLY A 198 SER A 201 SITE 4 AC3 25 LYS A 218 HIS A 233 PHE A 236 LYS A 238 SITE 5 AC3 25 LEU A 239 LYS A 242 SER A 309 HOH A 573 SITE 6 AC3 25 HOH A 584 HOH A 598 HOH A 600 HOH A 627 SITE 7 AC3 25 HOH A 637 CRYST1 115.648 56.058 67.365 90.00 117.33 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008647 0.000000 0.004469 0.00000 SCALE2 0.000000 0.017839 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016710 0.00000