HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 07-JUL-11 3SRW TITLE S. AUREUS DIHYDROFOLATE REDUCTASE COMPLEXED WITH NOVEL 7-ARYL-2,4- TITLE 2 DIAMINOQUINAZOLINES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: DHFR; COMPND 5 EC: 1.5.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: FOLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS DIHYDROFOLATE REDUCTASE, DHFR, DRUG DESIGN, ENZYME INHIBITORS, KEYWDS 2 FOLATE, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.HILGERS REVDAT 3 28-FEB-24 3SRW 1 REMARK SEQADV REVDAT 2 19-OCT-11 3SRW 1 JRNL REVDAT 1 31-AUG-11 3SRW 0 JRNL AUTH X.LI,M.HILGERS,M.CUNNINGHAM,Z.CHEN,M.TRZOSS,J.ZHANG, JRNL AUTH 2 L.KOHNEN,T.LAM,C.CREIGHTON,K.G C,K.NELSON,B.KWAN,M.STIDHAM, JRNL AUTH 3 V.BROWN-DRIVER,K.J.SHAW,J.FINN JRNL TITL STRUCTURE-BASED DESIGN OF NEW DHFR-BASED ANTIBACTERIAL JRNL TITL 2 AGENTS: 7-ARYL-2,4-DIAMINOQUINAZOLINES. JRNL REF BIOORG.MED.CHEM.LETT. V. 21 5171 2011 JRNL REFN ISSN 0960-894X JRNL PMID 21831637 JRNL DOI 10.1016/J.BMCL.2011.07.059 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 22343 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1145 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1474 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.4670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1272 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 111 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 0.11000 REMARK 3 B12 (A**2) : -0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.707 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1387 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1894 ; 1.459 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 156 ; 6.409 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;34.218 ;24.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 226 ;12.623 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 8.524 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 207 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1035 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 613 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 936 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 121 ; 0.099 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 34 ; 0.300 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.132 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 805 ; 0.728 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1282 ; 1.076 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 702 ; 1.778 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 612 ; 2.625 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 2 X 20 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2910 -24.5490 8.6620 REMARK 3 T TENSOR REMARK 3 T11: 0.0090 T22: -0.0766 REMARK 3 T33: -0.0580 T12: 0.0139 REMARK 3 T13: -0.0653 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.4516 L22: 1.1973 REMARK 3 L33: 1.8177 L12: -0.3398 REMARK 3 L13: -0.1206 L23: 0.0179 REMARK 3 S TENSOR REMARK 3 S11: 0.0192 S12: 0.0368 S13: 0.0844 REMARK 3 S21: -0.0736 S22: 0.0032 S23: -0.0011 REMARK 3 S31: 0.2121 S32: -0.0362 S33: -0.0224 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 21 X 57 REMARK 3 ORIGIN FOR THE GROUP (A): -5.7510 -33.8750 3.2150 REMARK 3 T TENSOR REMARK 3 T11: 0.0994 T22: -0.0764 REMARK 3 T33: -0.0146 T12: -0.0105 REMARK 3 T13: -0.1050 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 0.7925 L22: 1.6460 REMARK 3 L33: 1.3998 L12: -0.8186 REMARK 3 L13: -0.1239 L23: 0.1024 REMARK 3 S TENSOR REMARK 3 S11: 0.1421 S12: 0.0508 S13: -0.1529 REMARK 3 S21: -0.0482 S22: -0.0533 S23: 0.1654 REMARK 3 S31: 0.3978 S32: -0.0643 S33: -0.0888 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 58 X 85 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5560 -37.6000 -4.4160 REMARK 3 T TENSOR REMARK 3 T11: 0.1733 T22: -0.0302 REMARK 3 T33: -0.0505 T12: 0.1046 REMARK 3 T13: -0.0339 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 3.6405 L22: 3.1493 REMARK 3 L33: 1.2677 L12: -2.2377 REMARK 3 L13: 1.7110 L23: -1.5591 REMARK 3 S TENSOR REMARK 3 S11: 0.3822 S12: 0.3391 S13: -0.1786 REMARK 3 S21: -0.8208 S22: -0.3992 S23: -0.2055 REMARK 3 S31: 0.1884 S32: 0.2254 S33: 0.0171 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 86 X 123 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2370 -23.9460 3.0920 REMARK 3 T TENSOR REMARK 3 T11: 0.0093 T22: -0.0794 REMARK 3 T33: -0.0450 T12: 0.0140 REMARK 3 T13: -0.0480 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.4801 L22: 1.2872 REMARK 3 L33: 2.1323 L12: -0.7818 REMARK 3 L13: 0.3565 L23: 0.2182 REMARK 3 S TENSOR REMARK 3 S11: 0.1119 S12: 0.1312 S13: 0.0899 REMARK 3 S21: -0.1749 S22: -0.0401 S23: -0.1412 REMARK 3 S31: 0.2278 S32: 0.0046 S33: -0.0718 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 124 X 130 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8880 -13.1740 4.1270 REMARK 3 T TENSOR REMARK 3 T11: 0.0603 T22: -0.0770 REMARK 3 T33: 0.0129 T12: 0.0080 REMARK 3 T13: -0.0779 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 6.4314 L22: 9.3271 REMARK 3 L33: 7.7050 L12: -0.5488 REMARK 3 L13: 2.9412 L23: -4.8785 REMARK 3 S TENSOR REMARK 3 S11: -0.3661 S12: 0.1139 S13: 0.7390 REMARK 3 S21: 0.0960 S22: 0.1179 S23: -0.2672 REMARK 3 S31: -0.6730 S32: -0.0777 S33: 0.2482 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 131 X 158 REMARK 3 ORIGIN FOR THE GROUP (A): -11.7870 -18.5670 3.7840 REMARK 3 T TENSOR REMARK 3 T11: -0.0476 T22: -0.0679 REMARK 3 T33: -0.0932 T12: -0.0159 REMARK 3 T13: -0.0554 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 3.3086 L22: 2.9980 REMARK 3 L33: 7.2444 L12: 0.5923 REMARK 3 L13: -2.6662 L23: -2.8821 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: -0.0171 S13: -0.0975 REMARK 3 S21: 0.0020 S22: 0.0007 S23: -0.0602 REMARK 3 S31: 0.1174 S32: -0.2180 S33: 0.0353 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 169 X 169 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8250 -31.5660 6.1010 REMARK 3 T TENSOR REMARK 3 T11: 0.0851 T22: -0.0328 REMARK 3 T33: 0.0080 T12: 0.0551 REMARK 3 T13: -0.0733 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.3185 L22: 3.4952 REMARK 3 L33: 1.6651 L12: -0.6542 REMARK 3 L13: 0.7146 L23: -1.1026 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: -0.0146 S13: 0.0009 REMARK 3 S21: -0.1550 S22: -0.0381 S23: -0.1141 REMARK 3 S31: 0.2414 S32: 0.1526 S33: 0.1004 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3SRW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066575. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR345 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 3.2.17 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22396 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 68.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 36.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : 0.15700 REMARK 200 R SYM FOR SHELL (I) : 0.15700 REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, MG ACETATE, MPD, ADA BUFFER, REMARK 280 PH 6.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.78467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.56933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.67700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.46167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.89233 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.78467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 71.56933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 89.46167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.67700 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 17.89233 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH X 260 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 1 REMARK 465 LYS X 159 REMARK 465 LEU X 160 REMARK 465 GLU X 161 REMARK 465 HIS X 162 REMARK 465 HIS X 163 REMARK 465 HIS X 164 REMARK 465 HIS X 165 REMARK 465 HIS X 166 REMARK 465 HIS X 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG X 13 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS X 39 -156.52 -122.83 REMARK 500 ASN X 70 84.12 -153.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Q27 X 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP X 169 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SQY RELATED DB: PDB REMARK 900 RELATED ID: 3SR5 RELATED DB: PDB REMARK 900 RELATED ID: 3SRQ RELATED DB: PDB REMARK 900 RELATED ID: 3SRR RELATED DB: PDB REMARK 900 RELATED ID: 3SRS RELATED DB: PDB REMARK 900 RELATED ID: 3SRU RELATED DB: PDB DBREF 3SRW X 1 159 UNP P0A017 DYR_STAAU 1 159 SEQADV 3SRW LEU X 160 UNP P0A017 EXPRESSION TAG SEQADV 3SRW GLU X 161 UNP P0A017 EXPRESSION TAG SEQADV 3SRW HIS X 162 UNP P0A017 EXPRESSION TAG SEQADV 3SRW HIS X 163 UNP P0A017 EXPRESSION TAG SEQADV 3SRW HIS X 164 UNP P0A017 EXPRESSION TAG SEQADV 3SRW HIS X 165 UNP P0A017 EXPRESSION TAG SEQADV 3SRW HIS X 166 UNP P0A017 EXPRESSION TAG SEQADV 3SRW HIS X 167 UNP P0A017 EXPRESSION TAG SEQRES 1 X 167 MET THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG SEQRES 2 X 167 VAL ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO SEQRES 3 X 167 ASN ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS SEQRES 4 X 167 THR LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY SEQRES 5 X 167 LYS PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER SEQRES 6 X 167 ASP THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SEQRES 7 X 167 SER ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE SEQRES 8 X 167 ILE PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP SEQRES 9 X 167 LYS VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS SEQRES 10 X 167 PHE ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU SEQRES 11 X 167 ASP TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP SEQRES 12 X 167 GLU LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE SEQRES 13 X 167 ARG LYS LYS LEU GLU HIS HIS HIS HIS HIS HIS HET Q27 X 168 26 HET NAP X 169 48 HETNAM Q27 7-(2-ETHOXYNAPHTHALEN-1-YL)-6-METHYLQUINAZOLINE-2,4- HETNAM 2 Q27 DIAMINE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 Q27 C21 H20 N4 O FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 HOH *111(H2 O) HELIX 1 1 LEU X 25 THR X 37 1 13 HELIX 2 2 ARG X 45 GLY X 52 1 8 HELIX 3 3 SER X 79 LEU X 86 5 8 HELIX 4 4 GLY X 95 ILE X 103 1 9 SHEET 1 A 8 VAL X 74 ILE X 77 0 SHEET 2 A 8 ARG X 59 LEU X 63 1 N ASN X 60 O ASP X 75 SHEET 3 A 8 THR X 40 GLY X 44 1 N MET X 43 O LEU X 63 SHEET 4 A 8 VAL X 90 GLY X 94 1 O PHE X 93 N VAL X 42 SHEET 5 A 8 LEU X 3 ASP X 10 1 N SER X 4 O ILE X 92 SHEET 6 A 8 ASP X 108 ILE X 114 1 O ILE X 114 N HIS X 9 SHEET 7 A 8 HIS X 150 ARG X 157 -1 O LEU X 153 N ILE X 111 SHEET 8 A 8 TRP X 132 GLU X 139 -1 N VAL X 138 O PHE X 152 SHEET 1 B 2 VAL X 14 GLY X 16 0 SHEET 2 B 2 THR X 122 PHE X 123 -1 O THR X 122 N ILE X 15 CISPEP 1 GLY X 94 GLY X 95 0 4.91 SITE 1 AC1 11 LEU X 6 VAL X 7 ALA X 8 LEU X 21 SITE 2 AC1 11 ASP X 28 LEU X 29 VAL X 32 THR X 47 SITE 3 AC1 11 ILE X 51 PHE X 93 NAP X 169 SITE 1 AC2 30 VAL X 7 ALA X 8 ILE X 15 GLY X 16 SITE 2 AC2 30 PHE X 17 ASN X 19 GLN X 20 LEU X 21 SITE 3 AC2 30 GLY X 44 ARG X 45 LYS X 46 THR X 47 SITE 4 AC2 30 LEU X 63 THR X 64 SER X 65 HIS X 78 SITE 5 AC2 30 ILE X 80 PHE X 93 GLY X 95 GLN X 96 SITE 6 AC2 30 THR X 97 LEU X 98 GLU X 101 THR X 122 SITE 7 AC2 30 Q27 X 168 HOH X 194 HOH X 231 HOH X 237 SITE 8 AC2 30 HOH X 276 HOH X 277 CRYST1 79.287 79.287 107.354 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012612 0.007282 0.000000 0.00000 SCALE2 0.000000 0.014564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009315 0.00000