data_3SS9 # _entry.id 3SS9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3SS9 RCSB RCSB066588 WWPDB D_1000066588 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SS7 'Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution' unspecified PDB 3AWO 'Crystal structure of D-serine dehydratase in complex with D-serine from chicken kidney (EDTA-treated)' unspecified PDB 3AWN 'Crystal structure of D-serine dehydratase from chicken kidney (2,3-DAP complex)' unspecified PDB 3ANV 'Crystal structure of D-serine dehydratase from chicken kidney (2,3-DAP complex)' unspecified PDB 3ROX 'Crystal structure of Selenomethionine incorporated apo D-serine deaminase from Salmonella tyhimurium' unspecified PDB 3ROZ 'Crystal structure of apo D-serine deaminase from Salmonella typhimurium' unspecified # _pdbx_database_status.entry_id 3SS9 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-07-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Urusova, D.V.' 1 'Isupov, M.N.' 2 'Antonyuk, S.V.' 3 'Kachalova, G.S.' 4 'Vagin, A.A.' 5 'Lebedev, A.A.' 6 'Bourenkov, G.P.' 7 'Dauter, Z.' 8 'Bartunik, H.D.' 9 'Melik-Adamyan, W.R.' 10 'Mueller, T.D.' 11 'Schnackerz, K.D.' 12 # _citation.id primary _citation.title 'Crystal structure of D-serine dehydratase from Escherichia coli.' _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1824 _citation.page_first 422 _citation.page_last 432 _citation.year 2011 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22197591 _citation.pdbx_database_id_DOI 10.1016/j.bbapap.2011.10.017 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Urusova, D.V.' 1 primary 'Isupov, M.N.' 2 primary 'Antonyuk, S.' 3 primary 'Kachalova, G.S.' 4 primary 'Oblomova, G.' 5 primary 'Vagin, A.A.' 6 primary 'Lebedev, A.A.' 7 primary 'Bourenko, G.P.' 8 primary 'Dauter, Z.' 9 primary 'Bartunik, H.D.' 10 primary 'Lamzin, V.S.' 11 primary 'Melik-Adamyan, W.R.' 12 primary 'Mueller, T.D.' 13 primary 'Schnackerz, K.D.' 14 # _cell.length_a 143.160 _cell.length_b 47.738 _cell.length_c 72.300 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3SS9 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3SS9 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'D-serine dehydratase' 47950.371 1 4.3.1.18 ? ? ? 2 non-polymer syn "PYRIDOXAL-5'-PHOSPHATE" 247.142 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 water nat water 18.015 424 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'D-serine deaminase, DSD' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESE LVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGL HDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCAS VSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR ; _entity_poly.pdbx_seq_one_letter_code_can ;MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESE LVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGL HDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCAS VSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ASN n 1 4 ALA n 1 5 LYS n 1 6 MET n 1 7 ASN n 1 8 SER n 1 9 LEU n 1 10 ILE n 1 11 ALA n 1 12 GLN n 1 13 TYR n 1 14 PRO n 1 15 LEU n 1 16 VAL n 1 17 LYS n 1 18 ASP n 1 19 LEU n 1 20 VAL n 1 21 ALA n 1 22 LEU n 1 23 LYS n 1 24 GLU n 1 25 THR n 1 26 THR n 1 27 TRP n 1 28 PHE n 1 29 ASN n 1 30 PRO n 1 31 GLY n 1 32 THR n 1 33 THR n 1 34 SER n 1 35 LEU n 1 36 ALA n 1 37 GLU n 1 38 GLY n 1 39 LEU n 1 40 PRO n 1 41 TYR n 1 42 VAL n 1 43 GLY n 1 44 LEU n 1 45 THR n 1 46 GLU n 1 47 GLN n 1 48 ASP n 1 49 VAL n 1 50 GLN n 1 51 ASP n 1 52 ALA n 1 53 HIS n 1 54 ALA n 1 55 ARG n 1 56 LEU n 1 57 SER n 1 58 ARG n 1 59 PHE n 1 60 ALA n 1 61 PRO n 1 62 TYR n 1 63 LEU n 1 64 ALA n 1 65 LYS n 1 66 ALA n 1 67 PHE n 1 68 PRO n 1 69 GLU n 1 70 THR n 1 71 ALA n 1 72 ALA n 1 73 THR n 1 74 GLY n 1 75 GLY n 1 76 ILE n 1 77 ILE n 1 78 GLU n 1 79 SER n 1 80 GLU n 1 81 LEU n 1 82 VAL n 1 83 ALA n 1 84 ILE n 1 85 PRO n 1 86 ALA n 1 87 MET n 1 88 GLN n 1 89 LYS n 1 90 ARG n 1 91 LEU n 1 92 GLU n 1 93 LYS n 1 94 GLU n 1 95 TYR n 1 96 GLN n 1 97 GLN n 1 98 PRO n 1 99 ILE n 1 100 SER n 1 101 GLY n 1 102 GLN n 1 103 LEU n 1 104 LEU n 1 105 LEU n 1 106 LYS n 1 107 LYS n 1 108 ASP n 1 109 SER n 1 110 HIS n 1 111 LEU n 1 112 PRO n 1 113 ILE n 1 114 SER n 1 115 GLY n 1 116 SER n 1 117 ILE n 1 118 LYS n 1 119 ALA n 1 120 ARG n 1 121 GLY n 1 122 GLY n 1 123 ILE n 1 124 TYR n 1 125 GLU n 1 126 VAL n 1 127 LEU n 1 128 ALA n 1 129 HIS n 1 130 ALA n 1 131 GLU n 1 132 LYS n 1 133 LEU n 1 134 ALA n 1 135 LEU n 1 136 GLU n 1 137 ALA n 1 138 GLY n 1 139 LEU n 1 140 LEU n 1 141 THR n 1 142 LEU n 1 143 ASP n 1 144 ASP n 1 145 ASP n 1 146 TYR n 1 147 SER n 1 148 LYS n 1 149 LEU n 1 150 LEU n 1 151 SER n 1 152 PRO n 1 153 GLU n 1 154 PHE n 1 155 LYS n 1 156 GLN n 1 157 PHE n 1 158 PHE n 1 159 SER n 1 160 GLN n 1 161 TYR n 1 162 SER n 1 163 ILE n 1 164 ALA n 1 165 VAL n 1 166 GLY n 1 167 SER n 1 168 THR n 1 169 GLY n 1 170 ASN n 1 171 LEU n 1 172 GLY n 1 173 LEU n 1 174 SER n 1 175 ILE n 1 176 GLY n 1 177 ILE n 1 178 MET n 1 179 SER n 1 180 ALA n 1 181 ARG n 1 182 ILE n 1 183 GLY n 1 184 PHE n 1 185 LYS n 1 186 VAL n 1 187 THR n 1 188 VAL n 1 189 HIS n 1 190 MET n 1 191 SER n 1 192 ALA n 1 193 ASP n 1 194 ALA n 1 195 ARG n 1 196 ALA n 1 197 TRP n 1 198 LYS n 1 199 LYS n 1 200 ALA n 1 201 LYS n 1 202 LEU n 1 203 ARG n 1 204 SER n 1 205 HIS n 1 206 GLY n 1 207 VAL n 1 208 THR n 1 209 VAL n 1 210 VAL n 1 211 GLU n 1 212 TYR n 1 213 GLU n 1 214 GLN n 1 215 ASP n 1 216 TYR n 1 217 GLY n 1 218 VAL n 1 219 ALA n 1 220 VAL n 1 221 GLU n 1 222 GLU n 1 223 GLY n 1 224 ARG n 1 225 LYS n 1 226 ALA n 1 227 ALA n 1 228 GLN n 1 229 SER n 1 230 ASP n 1 231 PRO n 1 232 ASN n 1 233 CYS n 1 234 PHE n 1 235 PHE n 1 236 ILE n 1 237 ASP n 1 238 ASP n 1 239 GLU n 1 240 ASN n 1 241 SER n 1 242 ARG n 1 243 THR n 1 244 LEU n 1 245 PHE n 1 246 LEU n 1 247 GLY n 1 248 TYR n 1 249 SER n 1 250 VAL n 1 251 ALA n 1 252 GLY n 1 253 GLN n 1 254 ARG n 1 255 LEU n 1 256 LYS n 1 257 ALA n 1 258 GLN n 1 259 PHE n 1 260 ALA n 1 261 GLN n 1 262 GLN n 1 263 GLY n 1 264 ARG n 1 265 ILE n 1 266 VAL n 1 267 ASP n 1 268 ALA n 1 269 ASP n 1 270 ASN n 1 271 PRO n 1 272 LEU n 1 273 PHE n 1 274 VAL n 1 275 TYR n 1 276 LEU n 1 277 PRO n 1 278 CYS n 1 279 GLY n 1 280 VAL n 1 281 GLY n 1 282 GLY n 1 283 GLY n 1 284 PRO n 1 285 GLY n 1 286 GLY n 1 287 VAL n 1 288 ALA n 1 289 PHE n 1 290 GLY n 1 291 LEU n 1 292 LYS n 1 293 LEU n 1 294 ALA n 1 295 PHE n 1 296 GLY n 1 297 ASP n 1 298 HIS n 1 299 VAL n 1 300 HIS n 1 301 CYS n 1 302 PHE n 1 303 PHE n 1 304 ALA n 1 305 GLU n 1 306 PRO n 1 307 THR n 1 308 HIS n 1 309 SER n 1 310 PRO n 1 311 CYS n 1 312 MET n 1 313 LEU n 1 314 LEU n 1 315 GLY n 1 316 VAL n 1 317 HIS n 1 318 THR n 1 319 GLY n 1 320 LEU n 1 321 HIS n 1 322 ASP n 1 323 GLN n 1 324 ILE n 1 325 SER n 1 326 VAL n 1 327 GLN n 1 328 ASP n 1 329 ILE n 1 330 GLY n 1 331 ILE n 1 332 ASP n 1 333 ASN n 1 334 LEU n 1 335 THR n 1 336 ALA n 1 337 ALA n 1 338 ASP n 1 339 GLY n 1 340 LEU n 1 341 ALA n 1 342 VAL n 1 343 GLY n 1 344 ARG n 1 345 ALA n 1 346 SER n 1 347 GLY n 1 348 PHE n 1 349 VAL n 1 350 GLY n 1 351 ARG n 1 352 ALA n 1 353 MET n 1 354 GLU n 1 355 ARG n 1 356 LEU n 1 357 LEU n 1 358 ASP n 1 359 GLY n 1 360 PHE n 1 361 TYR n 1 362 THR n 1 363 LEU n 1 364 SER n 1 365 ASP n 1 366 GLN n 1 367 THR n 1 368 MET n 1 369 TYR n 1 370 ASP n 1 371 MET n 1 372 LEU n 1 373 GLY n 1 374 TRP n 1 375 LEU n 1 376 ALA n 1 377 GLN n 1 378 GLU n 1 379 GLU n 1 380 GLY n 1 381 ILE n 1 382 ARG n 1 383 LEU n 1 384 GLU n 1 385 PRO n 1 386 SER n 1 387 ALA n 1 388 LEU n 1 389 ALA n 1 390 GLY n 1 391 MET n 1 392 ALA n 1 393 GLY n 1 394 PRO n 1 395 GLN n 1 396 ARG n 1 397 VAL n 1 398 CYS n 1 399 ALA n 1 400 SER n 1 401 VAL n 1 402 SER n 1 403 TYR n 1 404 GLN n 1 405 GLN n 1 406 MET n 1 407 HIS n 1 408 GLY n 1 409 PHE n 1 410 SER n 1 411 ALA n 1 412 GLU n 1 413 GLN n 1 414 LEU n 1 415 ARG n 1 416 ASN n 1 417 THR n 1 418 THR n 1 419 HIS n 1 420 LEU n 1 421 VAL n 1 422 TRP n 1 423 ALA n 1 424 THR n 1 425 GLY n 1 426 GLY n 1 427 GLY n 1 428 MET n 1 429 VAL n 1 430 PRO n 1 431 GLU n 1 432 GLU n 1 433 GLU n 1 434 MET n 1 435 ASN n 1 436 GLN n 1 437 TYR n 1 438 LEU n 1 439 ALA n 1 440 LYS n 1 441 GLY n 1 442 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b2366, dsdA, dsdA b2366JW2393, JW2363' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SDHD_ECOLI _struct_ref.pdbx_db_accession P00926 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESE LVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGL HDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCAS VSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3SS9 _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 442 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00926 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 442 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 442 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLP non-polymer . "PYRIDOXAL-5'-PHOSPHATE" 'VITAMIN B6 Phosphate' 'C8 H10 N O6 P' 247.142 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3SS9 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.58 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '2.0 M sodium formate, 0.1 M imidazole/maleate buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.05 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MPG/DESY, HAMBURG BEAMLINE BW6' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.05 _diffrn_source.pdbx_synchrotron_site 'MPG/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW6 # _reflns.entry_id 3SS9 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.97 _reflns.d_resolution_low 40.0 _reflns.number_all ? _reflns.number_obs 35756 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.097 _reflns.pdbx_netI_over_sigmaI 19.8 _reflns.B_iso_Wilson_estimate 25.5 _reflns.pdbx_redundancy 6.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.97 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_Rsym_value 0.515 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3SS9 _refine.ls_d_res_high 1.9700 _refine.ls_d_res_low 39.8400 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_number_reflns_obs 35755 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1728 _refine.ls_R_factor_R_work 0.1718 _refine.ls_wR_factor_R_work 0.1599 _refine.ls_R_factor_R_free 0.2159 _refine.ls_wR_factor_R_free 0.2063 _refine.ls_percent_reflns_R_free 2.1000 _refine.ls_number_reflns_R_free 734 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.7884 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.0200 _refine.aniso_B[2][2] -0.9800 _refine.aniso_B[3][3] -0.0400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9620 _refine.correlation_coeff_Fo_to_Fc_free 0.9520 _refine.overall_SU_R_Cruickshank_DPI 0.1475 _refine.overall_SU_R_free 0.1401 _refine.pdbx_overall_ESU_R_Free 0.1400 _refine.overall_SU_ML 0.0970 _refine.overall_SU_B 3.4030 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8599 _refine.B_iso_max 65.260 _refine.B_iso_min 10.600 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3278 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 424 _refine_hist.number_atoms_total 3718 _refine_hist.d_res_high 1.9700 _refine_hist.d_res_low 39.8400 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 3394 0.014 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 4606 1.401 1.967 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 440 6.075 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 149 35.269 24.228 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 553 13.851 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18 13.215 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 503 0.103 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2604 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_nbd_refined 1708 0.217 0.200 ? ? 'X-RAY DIFFRACTION' r_nbtor_refined 2337 0.302 0.200 ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 385 0.157 0.200 ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined 2 0.085 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 33 0.133 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 33 0.154 0.200 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 2142 0.718 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 3413 1.298 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1268 2.070 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1188 3.410 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.9700 _refine_ls_shell.d_res_low 2.0210 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 2503 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2420 _refine_ls_shell.R_factor_R_free 0.3670 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2562 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3SS9 _struct.title 'Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution' _struct.pdbx_descriptor 'D-serine dehydratase (E.C.4.3.1.18)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SS9 _struct_keywords.pdbx_keywords LYASE _struct_keywords.text ;D-Serine dehydratase, type II fold, alfa, beta elimination, pyridoxal-5'-phosphate, Lyase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 14 ? ALA A 21 ? PRO X 14 ALA X 21 1 ? 8 HELX_P HELX_P2 2 SER A 34 ? LEU A 39 ? SER X 34 LEU X 39 1 ? 6 HELX_P HELX_P3 3 PRO A 40 ? VAL A 42 ? PRO X 40 VAL X 42 5 ? 3 HELX_P HELX_P4 4 THR A 45 ? PHE A 67 ? THR X 45 PHE X 67 1 ? 23 HELX_P HELX_P5 5 PRO A 68 ? GLY A 74 ? PRO X 68 GLY X 74 5 ? 7 HELX_P HELX_P6 6 ILE A 84 ? GLN A 96 ? ILE X 84 GLN X 96 1 ? 13 HELX_P HELX_P7 7 SER A 109 ? LEU A 111 ? SER X 109 LEU X 111 5 ? 3 HELX_P HELX_P8 8 ILE A 117 ? ALA A 137 ? ILE X 117 ALA X 137 1 ? 21 HELX_P HELX_P9 9 ASP A 145 ? LEU A 150 ? ASP X 145 LEU X 150 5 ? 6 HELX_P HELX_P10 10 SER A 151 ? GLN A 160 ? SER X 151 GLN X 160 1 ? 10 HELX_P HELX_P11 11 GLY A 169 ? GLY A 183 ? GLY X 169 GLY X 183 1 ? 15 HELX_P HELX_P12 12 ARG A 195 ? SER A 204 ? ARG X 195 SER X 204 1 ? 10 HELX_P HELX_P13 13 ASP A 215 ? GLN A 228 ? ASP X 215 GLN X 228 1 ? 14 HELX_P HELX_P14 14 SER A 241 ? VAL A 250 ? SER X 241 VAL X 250 1 ? 10 HELX_P HELX_P15 15 VAL A 250 ? GLY A 263 ? VAL X 250 GLY X 263 1 ? 14 HELX_P HELX_P16 16 GLY A 281 ? GLY A 296 ? GLY X 281 GLY X 296 1 ? 16 HELX_P HELX_P17 17 PRO A 310 ? GLY A 319 ? PRO X 310 GLY X 319 1 ? 10 HELX_P HELX_P18 18 LEU A 320 ? ILE A 324 ? LEU X 320 ILE X 324 5 ? 5 HELX_P HELX_P19 19 VAL A 326 ? GLY A 330 ? VAL X 326 GLY X 330 5 ? 5 HELX_P HELX_P20 20 ALA A 337 ? ALA A 341 ? ALA X 337 ALA X 341 5 ? 5 HELX_P HELX_P21 21 PHE A 348 ? GLU A 354 ? PHE X 348 GLU X 354 1 ? 7 HELX_P HELX_P22 22 ARG A 355 ? LEU A 357 ? ARG X 355 LEU X 357 5 ? 3 HELX_P HELX_P23 23 SER A 364 ? GLY A 380 ? SER X 364 GLY X 380 1 ? 17 HELX_P HELX_P24 24 GLU A 384 ? MET A 391 ? GLU X 384 MET X 391 5 ? 8 HELX_P HELX_P25 25 ALA A 392 ? SER A 400 ? ALA X 392 SER X 400 1 ? 9 HELX_P HELX_P26 26 SER A 400 ? GLY A 408 ? SER X 400 GLY X 408 1 ? 9 HELX_P HELX_P27 27 SER A 410 ? ASN A 416 ? SER X 410 ASN X 416 1 ? 7 HELX_P HELX_P28 28 PRO A 430 ? GLY A 441 ? PRO X 430 GLY X 441 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A GLU 305 OE1 ? ? ? 1_555 C K . K ? ? X GLU 305 X K 502 1_555 ? ? ? ? ? ? ? 2.674 ? metalc2 metalc ? ? A GLY 279 O ? ? ? 1_555 C K . K ? ? X GLY 279 X K 502 1_555 ? ? ? ? ? ? ? 2.757 ? metalc3 metalc ? ? A CYS 278 O ? ? ? 1_555 C K . K ? ? X CYS 278 X K 502 1_555 ? ? ? ? ? ? ? 2.863 ? metalc4 metalc ? ? A SER 309 O ? ? ? 1_555 C K . K ? ? X SER 309 X K 502 1_555 ? ? ? ? ? ? ? 2.917 ? metalc5 metalc ? ? A LEU 340 O ? ? ? 1_555 C K . K ? ? X LEU 340 X K 502 1_555 ? ? ? ? ? ? ? 3.281 ? covale1 covale ? ? A LYS 118 NZ ? ? ? 1_555 B PLP . C4A ? ? X LYS 118 X PLP 501 1_555 ? ? ? ? ? ? ? 1.475 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 74 A . ? GLY 74 X GLY 75 A ? GLY 75 X 1 -21.86 2 THR 168 A . ? THR 168 X GLY 169 A ? GLY 169 X 1 -6.65 3 ALA 192 A . ? ALA 192 X ASP 193 A ? ASP 193 X 1 -2.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 26 ? PHE A 28 ? THR X 26 PHE X 28 A 2 GLY A 359 ? LEU A 363 ? GLY X 359 LEU X 363 A 3 VAL A 299 ? PRO A 306 ? VAL X 299 PRO X 306 A 4 LEU A 272 ? PRO A 277 ? LEU X 272 PRO X 277 A 5 THR A 418 ? ALA A 423 ? THR X 418 ALA X 423 A 6 GLN A 102 ? LYS A 107 ? GLN X 102 LYS X 107 A 7 LEU A 81 ? ALA A 83 ? LEU X 81 ALA X 83 B 1 THR A 208 ? GLU A 211 ? THR X 208 GLU X 211 B 2 LYS A 185 ? MET A 190 ? LYS X 185 MET X 190 B 3 SER A 162 ? SER A 167 ? SER X 162 SER X 167 B 4 CYS A 233 ? ILE A 236 ? CYS X 233 ILE X 236 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 27 ? N TRP X 27 O PHE A 360 ? O PHE X 360 A 2 3 O TYR A 361 ? O TYR X 361 N GLU A 305 ? N GLU X 305 A 3 4 O PHE A 302 ? O PHE X 302 N LEU A 276 ? N LEU X 276 A 4 5 N PHE A 273 ? N PHE X 273 O LEU A 420 ? O LEU X 420 A 5 6 O HIS A 419 ? O HIS X 419 N GLN A 102 ? N GLN X 102 A 6 7 O LEU A 105 ? O LEU X 105 N VAL A 82 ? N VAL X 82 B 1 2 O VAL A 210 ? O VAL X 210 N MET A 190 ? N MET X 190 B 2 3 O HIS A 189 ? O HIS X 189 N VAL A 165 ? N VAL X 165 B 3 4 N ALA A 164 ? N ALA X 164 O ILE A 236 ? O ILE X 236 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE PLP X 501' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE K X 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 LYS A 118 ? LYS X 118 . ? 1_555 ? 2 AC1 15 ASN A 170 ? ASN X 170 . ? 1_555 ? 3 AC1 15 CYS A 278 ? CYS X 278 . ? 1_555 ? 4 AC1 15 GLY A 279 ? GLY X 279 . ? 1_555 ? 5 AC1 15 VAL A 280 ? VAL X 280 . ? 1_555 ? 6 AC1 15 GLY A 281 ? GLY X 281 . ? 1_555 ? 7 AC1 15 GLY A 282 ? GLY X 282 . ? 1_555 ? 8 AC1 15 GLY A 283 ? GLY X 283 . ? 1_555 ? 9 AC1 15 PRO A 284 ? PRO X 284 . ? 1_555 ? 10 AC1 15 LEU A 340 ? LEU X 340 . ? 1_555 ? 11 AC1 15 GLU A 384 ? GLU X 384 . ? 1_555 ? 12 AC1 15 SER A 386 ? SER X 386 . ? 1_555 ? 13 AC1 15 THR A 424 ? THR X 424 . ? 1_555 ? 14 AC1 15 HOH D . ? HOH X 839 . ? 1_555 ? 15 AC1 15 HOH D . ? HOH X 874 . ? 1_555 ? 16 AC2 6 CYS A 278 ? CYS X 278 . ? 1_555 ? 17 AC2 6 GLY A 279 ? GLY X 279 . ? 1_555 ? 18 AC2 6 GLU A 305 ? GLU X 305 . ? 1_555 ? 19 AC2 6 SER A 309 ? SER X 309 . ? 1_555 ? 20 AC2 6 CYS A 311 ? CYS X 311 . ? 1_555 ? 21 AC2 6 LEU A 340 ? LEU X 340 . ? 1_555 ? # _atom_sites.entry_id 3SS9 _atom_sites.fract_transf_matrix[1][1] 0.006985 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020948 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013831 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C K N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? X . n A 1 2 GLU 2 2 ? ? ? X . n A 1 3 ASN 3 3 ? ? ? X . n A 1 4 ALA 4 4 ? ? ? X . n A 1 5 LYS 5 5 ? ? ? X . n A 1 6 MET 6 6 ? ? ? X . n A 1 7 ASN 7 7 ? ? ? X . n A 1 8 SER 8 8 ? ? ? X . n A 1 9 LEU 9 9 ? ? ? X . n A 1 10 ILE 10 10 ? ? ? X . n A 1 11 ALA 11 11 ? ? ? X . n A 1 12 GLN 12 12 12 GLN ALA X . n A 1 13 TYR 13 13 13 TYR TYR X . n A 1 14 PRO 14 14 14 PRO PRO X . n A 1 15 LEU 15 15 15 LEU LEU X . n A 1 16 VAL 16 16 16 VAL VAL X . n A 1 17 LYS 17 17 17 LYS LYS X . n A 1 18 ASP 18 18 18 ASP ASP X . n A 1 19 LEU 19 19 19 LEU LEU X . n A 1 20 VAL 20 20 20 VAL VAL X . n A 1 21 ALA 21 21 21 ALA ALA X . n A 1 22 LEU 22 22 22 LEU LEU X . n A 1 23 LYS 23 23 23 LYS LYS X . n A 1 24 GLU 24 24 24 GLU GLU X . n A 1 25 THR 25 25 25 THR THR X . n A 1 26 THR 26 26 26 THR THR X . n A 1 27 TRP 27 27 27 TRP TRP X . n A 1 28 PHE 28 28 28 PHE PHE X . n A 1 29 ASN 29 29 29 ASN ASN X . n A 1 30 PRO 30 30 30 PRO PRO X . n A 1 31 GLY 31 31 31 GLY GLY X . n A 1 32 THR 32 32 32 THR THR X . n A 1 33 THR 33 33 33 THR THR X . n A 1 34 SER 34 34 34 SER SER X . n A 1 35 LEU 35 35 35 LEU LEU X . n A 1 36 ALA 36 36 36 ALA ALA X . n A 1 37 GLU 37 37 37 GLU GLU X . n A 1 38 GLY 38 38 38 GLY GLY X . n A 1 39 LEU 39 39 39 LEU LEU X . n A 1 40 PRO 40 40 40 PRO PRO X . n A 1 41 TYR 41 41 41 TYR TYR X . n A 1 42 VAL 42 42 42 VAL VAL X . n A 1 43 GLY 43 43 43 GLY GLY X . n A 1 44 LEU 44 44 44 LEU LEU X . n A 1 45 THR 45 45 45 THR THR X . n A 1 46 GLU 46 46 46 GLU GLU X . n A 1 47 GLN 47 47 47 GLN GLN X . n A 1 48 ASP 48 48 48 ASP ASP X . n A 1 49 VAL 49 49 49 VAL VAL X . n A 1 50 GLN 50 50 50 GLN GLN X . n A 1 51 ASP 51 51 51 ASP ASP X . n A 1 52 ALA 52 52 52 ALA ALA X . n A 1 53 HIS 53 53 53 HIS HIS X . n A 1 54 ALA 54 54 54 ALA ALA X . n A 1 55 ARG 55 55 55 ARG ARG X . n A 1 56 LEU 56 56 56 LEU LEU X . n A 1 57 SER 57 57 57 SER SER X . n A 1 58 ARG 58 58 58 ARG ARG X . n A 1 59 PHE 59 59 59 PHE PHE X . n A 1 60 ALA 60 60 60 ALA ALA X . n A 1 61 PRO 61 61 61 PRO PRO X . n A 1 62 TYR 62 62 62 TYR TYR X . n A 1 63 LEU 63 63 63 LEU LEU X . n A 1 64 ALA 64 64 64 ALA ALA X . n A 1 65 LYS 65 65 65 LYS LYS X . n A 1 66 ALA 66 66 66 ALA ALA X . n A 1 67 PHE 67 67 67 PHE PHE X . n A 1 68 PRO 68 68 68 PRO PRO X . n A 1 69 GLU 69 69 69 GLU GLU X . n A 1 70 THR 70 70 70 THR THR X . n A 1 71 ALA 71 71 71 ALA ALA X . n A 1 72 ALA 72 72 72 ALA ALA X . n A 1 73 THR 73 73 73 THR THR X . n A 1 74 GLY 74 74 74 GLY GLY X . n A 1 75 GLY 75 75 75 GLY GLY X . n A 1 76 ILE 76 76 76 ILE ILE X . n A 1 77 ILE 77 77 77 ILE ILE X . n A 1 78 GLU 78 78 78 GLU GLU X . n A 1 79 SER 79 79 79 SER SER X . n A 1 80 GLU 80 80 80 GLU GLU X . n A 1 81 LEU 81 81 81 LEU LEU X . n A 1 82 VAL 82 82 82 VAL VAL X . n A 1 83 ALA 83 83 83 ALA ALA X . n A 1 84 ILE 84 84 84 ILE ILE X . n A 1 85 PRO 85 85 85 PRO PRO X . n A 1 86 ALA 86 86 86 ALA ALA X . n A 1 87 MET 87 87 87 MET MET X . n A 1 88 GLN 88 88 88 GLN GLN X . n A 1 89 LYS 89 89 89 LYS LYS X . n A 1 90 ARG 90 90 90 ARG ARG X . n A 1 91 LEU 91 91 91 LEU LEU X . n A 1 92 GLU 92 92 92 GLU GLU X . n A 1 93 LYS 93 93 93 LYS LYS X . n A 1 94 GLU 94 94 94 GLU GLU X . n A 1 95 TYR 95 95 95 TYR TYR X . n A 1 96 GLN 96 96 96 GLN GLN X . n A 1 97 GLN 97 97 97 GLN GLN X . n A 1 98 PRO 98 98 98 PRO PRO X . n A 1 99 ILE 99 99 99 ILE ILE X . n A 1 100 SER 100 100 100 SER SER X . n A 1 101 GLY 101 101 101 GLY GLY X . n A 1 102 GLN 102 102 102 GLN GLN X . n A 1 103 LEU 103 103 103 LEU LEU X . n A 1 104 LEU 104 104 104 LEU LEU X . n A 1 105 LEU 105 105 105 LEU LEU X . n A 1 106 LYS 106 106 106 LYS LYS X . n A 1 107 LYS 107 107 107 LYS LYS X . n A 1 108 ASP 108 108 108 ASP ASP X . n A 1 109 SER 109 109 109 SER SER X . n A 1 110 HIS 110 110 110 HIS HIS X . n A 1 111 LEU 111 111 111 LEU LEU X . n A 1 112 PRO 112 112 112 PRO PRO X . n A 1 113 ILE 113 113 113 ILE ILE X . n A 1 114 SER 114 114 114 SER SER X . n A 1 115 GLY 115 115 115 GLY GLY X . n A 1 116 SER 116 116 116 SER SER X . n A 1 117 ILE 117 117 117 ILE ILE X . n A 1 118 LYS 118 118 118 LYS LYS X . n A 1 119 ALA 119 119 119 ALA ALA X . n A 1 120 ARG 120 120 120 ARG ARG X . n A 1 121 GLY 121 121 121 GLY GLY X . n A 1 122 GLY 122 122 122 GLY GLY X . n A 1 123 ILE 123 123 123 ILE ILE X . n A 1 124 TYR 124 124 124 TYR TYR X . n A 1 125 GLU 125 125 125 GLU GLU X . n A 1 126 VAL 126 126 126 VAL VAL X . n A 1 127 LEU 127 127 127 LEU LEU X . n A 1 128 ALA 128 128 128 ALA ALA X . n A 1 129 HIS 129 129 129 HIS HIS X . n A 1 130 ALA 130 130 130 ALA ALA X . n A 1 131 GLU 131 131 131 GLU GLU X . n A 1 132 LYS 132 132 132 LYS LYS X . n A 1 133 LEU 133 133 133 LEU LEU X . n A 1 134 ALA 134 134 134 ALA ALA X . n A 1 135 LEU 135 135 135 LEU LEU X . n A 1 136 GLU 136 136 136 GLU GLU X . n A 1 137 ALA 137 137 137 ALA ALA X . n A 1 138 GLY 138 138 138 GLY GLY X . n A 1 139 LEU 139 139 139 LEU LEU X . n A 1 140 LEU 140 140 140 LEU LEU X . n A 1 141 THR 141 141 141 THR THR X . n A 1 142 LEU 142 142 142 LEU LEU X . n A 1 143 ASP 143 143 143 ASP ASP X . n A 1 144 ASP 144 144 144 ASP ASP X . n A 1 145 ASP 145 145 145 ASP ASP X . n A 1 146 TYR 146 146 146 TYR TYR X . n A 1 147 SER 147 147 147 SER SER X . n A 1 148 LYS 148 148 148 LYS LYS X . n A 1 149 LEU 149 149 149 LEU LEU X . n A 1 150 LEU 150 150 150 LEU LEU X . n A 1 151 SER 151 151 151 SER SER X . n A 1 152 PRO 152 152 152 PRO PRO X . n A 1 153 GLU 153 153 153 GLU GLU X . n A 1 154 PHE 154 154 154 PHE PHE X . n A 1 155 LYS 155 155 155 LYS LYS X . n A 1 156 GLN 156 156 156 GLN GLN X . n A 1 157 PHE 157 157 157 PHE PHE X . n A 1 158 PHE 158 158 158 PHE PHE X . n A 1 159 SER 159 159 159 SER SER X . n A 1 160 GLN 160 160 160 GLN GLN X . n A 1 161 TYR 161 161 161 TYR TYR X . n A 1 162 SER 162 162 162 SER SER X . n A 1 163 ILE 163 163 163 ILE ILE X . n A 1 164 ALA 164 164 164 ALA ALA X . n A 1 165 VAL 165 165 165 VAL VAL X . n A 1 166 GLY 166 166 166 GLY GLY X . n A 1 167 SER 167 167 167 SER SER X . n A 1 168 THR 168 168 168 THR THR X . n A 1 169 GLY 169 169 169 GLY GLY X . n A 1 170 ASN 170 170 170 ASN ASN X . n A 1 171 LEU 171 171 171 LEU LEU X . n A 1 172 GLY 172 172 172 GLY GLY X . n A 1 173 LEU 173 173 173 LEU LEU X . n A 1 174 SER 174 174 174 SER SER X . n A 1 175 ILE 175 175 175 ILE ILE X . n A 1 176 GLY 176 176 176 GLY GLY X . n A 1 177 ILE 177 177 177 ILE ILE X . n A 1 178 MET 178 178 178 MET MET X . n A 1 179 SER 179 179 179 SER SER X . n A 1 180 ALA 180 180 180 ALA ALA X . n A 1 181 ARG 181 181 181 ARG ARG X . n A 1 182 ILE 182 182 182 ILE ILE X . n A 1 183 GLY 183 183 183 GLY GLY X . n A 1 184 PHE 184 184 184 PHE PHE X . n A 1 185 LYS 185 185 185 LYS LYS X . n A 1 186 VAL 186 186 186 VAL VAL X . n A 1 187 THR 187 187 187 THR THR X . n A 1 188 VAL 188 188 188 VAL VAL X . n A 1 189 HIS 189 189 189 HIS HIS X . n A 1 190 MET 190 190 190 MET MET X . n A 1 191 SER 191 191 191 SER SER X . n A 1 192 ALA 192 192 192 ALA ALA X . n A 1 193 ASP 193 193 193 ASP ASP X . n A 1 194 ALA 194 194 194 ALA ALA X . n A 1 195 ARG 195 195 195 ARG ARG X . n A 1 196 ALA 196 196 196 ALA ALA X . n A 1 197 TRP 197 197 197 TRP TRP X . n A 1 198 LYS 198 198 198 LYS LYS X . n A 1 199 LYS 199 199 199 LYS LYS X . n A 1 200 ALA 200 200 200 ALA ALA X . n A 1 201 LYS 201 201 201 LYS LYS X . n A 1 202 LEU 202 202 202 LEU LEU X . n A 1 203 ARG 203 203 203 ARG ARG X . n A 1 204 SER 204 204 204 SER SER X . n A 1 205 HIS 205 205 205 HIS HIS X . n A 1 206 GLY 206 206 206 GLY GLY X . n A 1 207 VAL 207 207 207 VAL VAL X . n A 1 208 THR 208 208 208 THR THR X . n A 1 209 VAL 209 209 209 VAL VAL X . n A 1 210 VAL 210 210 210 VAL VAL X . n A 1 211 GLU 211 211 211 GLU GLU X . n A 1 212 TYR 212 212 212 TYR TYR X . n A 1 213 GLU 213 213 213 GLU GLU X . n A 1 214 GLN 214 214 214 GLN GLN X . n A 1 215 ASP 215 215 215 ASP ASP X . n A 1 216 TYR 216 216 216 TYR TYR X . n A 1 217 GLY 217 217 217 GLY GLY X . n A 1 218 VAL 218 218 218 VAL VAL X . n A 1 219 ALA 219 219 219 ALA ALA X . n A 1 220 VAL 220 220 220 VAL VAL X . n A 1 221 GLU 221 221 221 GLU SER X . n A 1 222 GLU 222 222 222 GLU GLU X . n A 1 223 GLY 223 223 223 GLY GLY X . n A 1 224 ARG 224 224 224 ARG ARG X . n A 1 225 LYS 225 225 225 LYS SER X . n A 1 226 ALA 226 226 226 ALA ALA X . n A 1 227 ALA 227 227 227 ALA ALA X . n A 1 228 GLN 228 228 228 GLN GLN X . n A 1 229 SER 229 229 229 SER SER X . n A 1 230 ASP 230 230 230 ASP ASP X . n A 1 231 PRO 231 231 231 PRO PRO X . n A 1 232 ASN 232 232 232 ASN ASN X . n A 1 233 CYS 233 233 233 CYS CYS X . n A 1 234 PHE 234 234 234 PHE PHE X . n A 1 235 PHE 235 235 235 PHE PHE X . n A 1 236 ILE 236 236 236 ILE ILE X . n A 1 237 ASP 237 237 237 ASP ASP X . n A 1 238 ASP 238 238 238 ASP ASP X . n A 1 239 GLU 239 239 239 GLU GLU X . n A 1 240 ASN 240 240 240 ASN ASN X . n A 1 241 SER 241 241 241 SER SER X . n A 1 242 ARG 242 242 242 ARG ARG X . n A 1 243 THR 243 243 243 THR THR X . n A 1 244 LEU 244 244 244 LEU LEU X . n A 1 245 PHE 245 245 245 PHE PHE X . n A 1 246 LEU 246 246 246 LEU LEU X . n A 1 247 GLY 247 247 247 GLY GLY X . n A 1 248 TYR 248 248 248 TYR TYR X . n A 1 249 SER 249 249 249 SER SER X . n A 1 250 VAL 250 250 250 VAL VAL X . n A 1 251 ALA 251 251 251 ALA ALA X . n A 1 252 GLY 252 252 252 GLY GLY X . n A 1 253 GLN 253 253 253 GLN GLN X . n A 1 254 ARG 254 254 254 ARG ARG X . n A 1 255 LEU 255 255 255 LEU LEU X . n A 1 256 LYS 256 256 256 LYS LYS X . n A 1 257 ALA 257 257 257 ALA ALA X . n A 1 258 GLN 258 258 258 GLN GLN X . n A 1 259 PHE 259 259 259 PHE PHE X . n A 1 260 ALA 260 260 260 ALA ALA X . n A 1 261 GLN 261 261 261 GLN GLN X . n A 1 262 GLN 262 262 262 GLN GLN X . n A 1 263 GLY 263 263 263 GLY GLY X . n A 1 264 ARG 264 264 264 ARG ARG X . n A 1 265 ILE 265 265 265 ILE ILE X . n A 1 266 VAL 266 266 266 VAL VAL X . n A 1 267 ASP 267 267 267 ASP ASP X . n A 1 268 ALA 268 268 268 ALA ALA X . n A 1 269 ASP 269 269 269 ASP ASP X . n A 1 270 ASN 270 270 270 ASN ASN X . n A 1 271 PRO 271 271 271 PRO PRO X . n A 1 272 LEU 272 272 272 LEU LEU X . n A 1 273 PHE 273 273 273 PHE PHE X . n A 1 274 VAL 274 274 274 VAL VAL X . n A 1 275 TYR 275 275 275 TYR TYR X . n A 1 276 LEU 276 276 276 LEU LEU X . n A 1 277 PRO 277 277 277 PRO PRO X . n A 1 278 CYS 278 278 278 CYS CYS X . n A 1 279 GLY 279 279 279 GLY GLY X . n A 1 280 VAL 280 280 280 VAL VAL X . n A 1 281 GLY 281 281 281 GLY GLY X . n A 1 282 GLY 282 282 282 GLY GLY X . n A 1 283 GLY 283 283 283 GLY GLY X . n A 1 284 PRO 284 284 284 PRO PRO X . n A 1 285 GLY 285 285 285 GLY GLY X . n A 1 286 GLY 286 286 286 GLY GLY X . n A 1 287 VAL 287 287 287 VAL VAL X . n A 1 288 ALA 288 288 288 ALA ALA X . n A 1 289 PHE 289 289 289 PHE PHE X . n A 1 290 GLY 290 290 290 GLY GLY X . n A 1 291 LEU 291 291 291 LEU LEU X . n A 1 292 LYS 292 292 292 LYS LYS X . n A 1 293 LEU 293 293 293 LEU LEU X . n A 1 294 ALA 294 294 294 ALA ALA X . n A 1 295 PHE 295 295 295 PHE PHE X . n A 1 296 GLY 296 296 296 GLY GLY X . n A 1 297 ASP 297 297 297 ASP ASP X . n A 1 298 HIS 298 298 298 HIS HIS X . n A 1 299 VAL 299 299 299 VAL VAL X . n A 1 300 HIS 300 300 300 HIS HIS X . n A 1 301 CYS 301 301 301 CYS CYS X . n A 1 302 PHE 302 302 302 PHE PHE X . n A 1 303 PHE 303 303 303 PHE PHE X . n A 1 304 ALA 304 304 304 ALA ALA X . n A 1 305 GLU 305 305 305 GLU GLU X . n A 1 306 PRO 306 306 306 PRO PRO X . n A 1 307 THR 307 307 307 THR THR X . n A 1 308 HIS 308 308 308 HIS HIS X . n A 1 309 SER 309 309 309 SER SER X . n A 1 310 PRO 310 310 310 PRO PRO X . n A 1 311 CYS 311 311 311 CYS CYS X . n A 1 312 MET 312 312 312 MET MET X . n A 1 313 LEU 313 313 313 LEU LEU X . n A 1 314 LEU 314 314 314 LEU LEU X . n A 1 315 GLY 315 315 315 GLY GLY X . n A 1 316 VAL 316 316 316 VAL VAL X . n A 1 317 HIS 317 317 317 HIS HIS X . n A 1 318 THR 318 318 318 THR THR X . n A 1 319 GLY 319 319 319 GLY GLY X . n A 1 320 LEU 320 320 320 LEU LEU X . n A 1 321 HIS 321 321 321 HIS HIS X . n A 1 322 ASP 322 322 322 ASP ASP X . n A 1 323 GLN 323 323 323 GLN GLN X . n A 1 324 ILE 324 324 324 ILE ILE X . n A 1 325 SER 325 325 325 SER SER X . n A 1 326 VAL 326 326 326 VAL VAL X . n A 1 327 GLN 327 327 327 GLN GLN X . n A 1 328 ASP 328 328 328 ASP ASP X . n A 1 329 ILE 329 329 329 ILE ILE X . n A 1 330 GLY 330 330 330 GLY GLY X . n A 1 331 ILE 331 331 331 ILE ILE X . n A 1 332 ASP 332 332 332 ASP ASP X . n A 1 333 ASN 333 333 333 ASN ASN X . n A 1 334 LEU 334 334 334 LEU LEU X . n A 1 335 THR 335 335 335 THR THR X . n A 1 336 ALA 336 336 336 ALA ALA X . n A 1 337 ALA 337 337 337 ALA ALA X . n A 1 338 ASP 338 338 338 ASP ASP X . n A 1 339 GLY 339 339 339 GLY GLY X . n A 1 340 LEU 340 340 340 LEU LEU X . n A 1 341 ALA 341 341 341 ALA ALA X . n A 1 342 VAL 342 342 342 VAL VAL X . n A 1 343 GLY 343 343 343 GLY GLY X . n A 1 344 ARG 344 344 344 ARG ARG X . n A 1 345 ALA 345 345 345 ALA ALA X . n A 1 346 SER 346 346 346 SER SER X . n A 1 347 GLY 347 347 347 GLY GLY X . n A 1 348 PHE 348 348 348 PHE PHE X . n A 1 349 VAL 349 349 349 VAL VAL X . n A 1 350 GLY 350 350 350 GLY GLY X . n A 1 351 ARG 351 351 351 ARG ARG X . n A 1 352 ALA 352 352 352 ALA ALA X . n A 1 353 MET 353 353 353 MET MET X . n A 1 354 GLU 354 354 354 GLU GLU X . n A 1 355 ARG 355 355 355 ARG ARG X . n A 1 356 LEU 356 356 356 LEU LEU X . n A 1 357 LEU 357 357 357 LEU LEU X . n A 1 358 ASP 358 358 358 ASP ASP X . n A 1 359 GLY 359 359 359 GLY GLY X . n A 1 360 PHE 360 360 360 PHE PHE X . n A 1 361 TYR 361 361 361 TYR TYR X . n A 1 362 THR 362 362 362 THR THR X . n A 1 363 LEU 363 363 363 LEU LEU X . n A 1 364 SER 364 364 364 SER SER X . n A 1 365 ASP 365 365 365 ASP ASP X . n A 1 366 GLN 366 366 366 GLN GLN X . n A 1 367 THR 367 367 367 THR THR X . n A 1 368 MET 368 368 368 MET MET X . n A 1 369 TYR 369 369 369 TYR TYR X . n A 1 370 ASP 370 370 370 ASP ASP X . n A 1 371 MET 371 371 371 MET MET X . n A 1 372 LEU 372 372 372 LEU LEU X . n A 1 373 GLY 373 373 373 GLY GLY X . n A 1 374 TRP 374 374 374 TRP TRP X . n A 1 375 LEU 375 375 375 LEU LEU X . n A 1 376 ALA 376 376 376 ALA ALA X . n A 1 377 GLN 377 377 377 GLN GLN X . n A 1 378 GLU 378 378 378 GLU GLU X . n A 1 379 GLU 379 379 379 GLU GLU X . n A 1 380 GLY 380 380 380 GLY GLY X . n A 1 381 ILE 381 381 381 ILE ILE X . n A 1 382 ARG 382 382 382 ARG ARG X . n A 1 383 LEU 383 383 383 LEU LEU X . n A 1 384 GLU 384 384 384 GLU GLU X . n A 1 385 PRO 385 385 385 PRO PRO X . n A 1 386 SER 386 386 386 SER SER X . n A 1 387 ALA 387 387 387 ALA ALA X . n A 1 388 LEU 388 388 388 LEU LEU X . n A 1 389 ALA 389 389 389 ALA ALA X . n A 1 390 GLY 390 390 390 GLY GLY X . n A 1 391 MET 391 391 391 MET MET X . n A 1 392 ALA 392 392 392 ALA ALA X . n A 1 393 GLY 393 393 393 GLY GLY X . n A 1 394 PRO 394 394 394 PRO PRO X . n A 1 395 GLN 395 395 395 GLN GLN X . n A 1 396 ARG 396 396 396 ARG ARG X . n A 1 397 VAL 397 397 397 VAL VAL X . n A 1 398 CYS 398 398 398 CYS CYS X . n A 1 399 ALA 399 399 399 ALA ALA X . n A 1 400 SER 400 400 400 SER SER X . n A 1 401 VAL 401 401 401 VAL VAL X . n A 1 402 SER 402 402 402 SER SER X . n A 1 403 TYR 403 403 403 TYR TYR X . n A 1 404 GLN 404 404 404 GLN GLN X . n A 1 405 GLN 405 405 405 GLN GLN X . n A 1 406 MET 406 406 406 MET MET X . n A 1 407 HIS 407 407 407 HIS HIS X . n A 1 408 GLY 408 408 408 GLY GLY X . n A 1 409 PHE 409 409 409 PHE PHE X . n A 1 410 SER 410 410 410 SER SER X . n A 1 411 ALA 411 411 411 ALA ALA X . n A 1 412 GLU 412 412 412 GLU GLU X . n A 1 413 GLN 413 413 413 GLN GLN X . n A 1 414 LEU 414 414 414 LEU LEU X . n A 1 415 ARG 415 415 415 ARG ARG X . n A 1 416 ASN 416 416 416 ASN ASN X . n A 1 417 THR 417 417 417 THR THR X . n A 1 418 THR 418 418 418 THR THR X . n A 1 419 HIS 419 419 419 HIS HIS X . n A 1 420 LEU 420 420 420 LEU LEU X . n A 1 421 VAL 421 421 421 VAL VAL X . n A 1 422 TRP 422 422 422 TRP TRP X . n A 1 423 ALA 423 423 423 ALA ALA X . n A 1 424 THR 424 424 424 THR THR X . n A 1 425 GLY 425 425 425 GLY GLY X . n A 1 426 GLY 426 426 426 GLY GLY X . n A 1 427 GLY 427 427 427 GLY GLY X . n A 1 428 MET 428 428 428 MET MET X . n A 1 429 VAL 429 429 429 VAL VAL X . n A 1 430 PRO 430 430 430 PRO PRO X . n A 1 431 GLU 431 431 431 GLU GLU X . n A 1 432 GLU 432 432 432 GLU GLU X . n A 1 433 GLU 433 433 433 GLU GLU X . n A 1 434 MET 434 434 434 MET MET X . n A 1 435 ASN 435 435 435 ASN ASN X . n A 1 436 GLN 436 436 436 GLN GLN X . n A 1 437 TYR 437 437 437 TYR TYR X . n A 1 438 LEU 438 438 438 LEU LEU X . n A 1 439 ALA 439 439 439 ALA ALA X . n A 1 440 LYS 440 440 440 LYS LYS X . n A 1 441 GLY 441 441 441 GLY GLY X . n A 1 442 ARG 442 442 442 ARG ARG X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLP 1 501 451 PLP PLP X . C 3 K 1 502 452 K K X . D 4 HOH 1 601 443 HOH HOH X . D 4 HOH 2 602 444 HOH HOH X . D 4 HOH 3 603 445 HOH HOH X . D 4 HOH 4 604 446 HOH HOH X . D 4 HOH 5 605 447 HOH HOH X . D 4 HOH 6 606 448 HOH HOH X . D 4 HOH 7 607 449 HOH HOH X . D 4 HOH 8 608 450 HOH HOH X . D 4 HOH 9 609 12 HOH HOH X . D 4 HOH 10 610 13 HOH HOH X . D 4 HOH 11 611 14 HOH HOH X . D 4 HOH 12 612 15 HOH HOH X . D 4 HOH 13 613 16 HOH HOH X . D 4 HOH 14 614 17 HOH HOH X . D 4 HOH 15 615 18 HOH HOH X . D 4 HOH 16 616 19 HOH HOH X . D 4 HOH 17 617 20 HOH HOH X . D 4 HOH 18 618 21 HOH HOH X . D 4 HOH 19 619 22 HOH HOH X . D 4 HOH 20 620 23 HOH HOH X . D 4 HOH 21 621 24 HOH HOH X . D 4 HOH 22 622 25 HOH HOH X . D 4 HOH 23 623 26 HOH HOH X . D 4 HOH 24 624 27 HOH HOH X . D 4 HOH 25 625 28 HOH HOH X . D 4 HOH 26 626 29 HOH HOH X . D 4 HOH 27 627 30 HOH HOH X . D 4 HOH 28 628 31 HOH HOH X . D 4 HOH 29 629 32 HOH HOH X . D 4 HOH 30 630 33 HOH HOH X . D 4 HOH 31 631 34 HOH HOH X . D 4 HOH 32 632 35 HOH HOH X . D 4 HOH 33 633 36 HOH HOH X . D 4 HOH 34 634 37 HOH HOH X . D 4 HOH 35 635 38 HOH HOH X . D 4 HOH 36 636 39 HOH HOH X . D 4 HOH 37 637 41 HOH HOH X . D 4 HOH 38 638 42 HOH HOH X . D 4 HOH 39 639 43 HOH HOH X . D 4 HOH 40 640 44 HOH HOH X . D 4 HOH 41 641 45 HOH HOH X . D 4 HOH 42 642 46 HOH HOH X . D 4 HOH 43 643 47 HOH HOH X . D 4 HOH 44 644 48 HOH HOH X . D 4 HOH 45 645 49 HOH HOH X . D 4 HOH 46 646 50 HOH HOH X . D 4 HOH 47 647 51 HOH HOH X . D 4 HOH 48 648 52 HOH HOH X . D 4 HOH 49 649 53 HOH HOH X . D 4 HOH 50 650 54 HOH HOH X . D 4 HOH 51 651 55 HOH HOH X . D 4 HOH 52 652 56 HOH HOH X . D 4 HOH 53 653 57 HOH HOH X . D 4 HOH 54 654 58 HOH HOH X . D 4 HOH 55 655 59 HOH HOH X . D 4 HOH 56 656 60 HOH HOH X . D 4 HOH 57 657 61 HOH HOH X . D 4 HOH 58 658 62 HOH HOH X . D 4 HOH 59 659 63 HOH HOH X . D 4 HOH 60 660 64 HOH HOH X . D 4 HOH 61 661 65 HOH HOH X . D 4 HOH 62 662 66 HOH HOH X . D 4 HOH 63 663 68 HOH HOH X . D 4 HOH 64 664 69 HOH HOH X . D 4 HOH 65 665 70 HOH HOH X . D 4 HOH 66 666 71 HOH HOH X . D 4 HOH 67 667 72 HOH HOH X . D 4 HOH 68 668 73 HOH HOH X . D 4 HOH 69 669 74 HOH HOH X . D 4 HOH 70 670 75 HOH HOH X . D 4 HOH 71 671 76 HOH HOH X . D 4 HOH 72 672 77 HOH HOH X . D 4 HOH 73 673 78 HOH HOH X . D 4 HOH 74 674 79 HOH HOH X . D 4 HOH 75 675 80 HOH HOH X . D 4 HOH 76 676 81 HOH HOH X . D 4 HOH 77 677 82 HOH HOH X . D 4 HOH 78 678 83 HOH HOH X . D 4 HOH 79 679 84 HOH HOH X . D 4 HOH 80 680 85 HOH HOH X . D 4 HOH 81 681 86 HOH HOH X . D 4 HOH 82 682 87 HOH HOH X . D 4 HOH 83 683 88 HOH HOH X . D 4 HOH 84 684 89 HOH HOH X . D 4 HOH 85 685 90 HOH HOH X . D 4 HOH 86 686 91 HOH HOH X . D 4 HOH 87 687 92 HOH HOH X . D 4 HOH 88 688 93 HOH HOH X . D 4 HOH 89 689 94 HOH HOH X . D 4 HOH 90 690 95 HOH HOH X . D 4 HOH 91 691 96 HOH HOH X . D 4 HOH 92 692 97 HOH HOH X . D 4 HOH 93 693 98 HOH HOH X . D 4 HOH 94 694 99 HOH HOH X . D 4 HOH 95 695 100 HOH HOH X . D 4 HOH 96 696 101 HOH HOH X . D 4 HOH 97 697 102 HOH HOH X . D 4 HOH 98 698 103 HOH HOH X . D 4 HOH 99 699 104 HOH HOH X . D 4 HOH 100 700 105 HOH HOH X . D 4 HOH 101 701 106 HOH HOH X . D 4 HOH 102 702 107 HOH HOH X . D 4 HOH 103 703 108 HOH HOH X . D 4 HOH 104 704 109 HOH HOH X . D 4 HOH 105 705 110 HOH HOH X . D 4 HOH 106 706 111 HOH HOH X . D 4 HOH 107 707 112 HOH HOH X . D 4 HOH 108 708 113 HOH HOH X . D 4 HOH 109 709 114 HOH HOH X . D 4 HOH 110 710 115 HOH HOH X . D 4 HOH 111 711 116 HOH HOH X . D 4 HOH 112 712 117 HOH HOH X . D 4 HOH 113 713 118 HOH HOH X . D 4 HOH 114 714 119 HOH HOH X . D 4 HOH 115 715 120 HOH HOH X . D 4 HOH 116 716 121 HOH HOH X . D 4 HOH 117 717 122 HOH HOH X . D 4 HOH 118 718 123 HOH HOH X . D 4 HOH 119 719 124 HOH HOH X . D 4 HOH 120 720 125 HOH HOH X . D 4 HOH 121 721 126 HOH HOH X . D 4 HOH 122 722 127 HOH HOH X . D 4 HOH 123 723 128 HOH HOH X . D 4 HOH 124 724 129 HOH HOH X . D 4 HOH 125 725 130 HOH HOH X . D 4 HOH 126 726 131 HOH HOH X . D 4 HOH 127 727 132 HOH HOH X . D 4 HOH 128 728 133 HOH HOH X . D 4 HOH 129 729 134 HOH HOH X . D 4 HOH 130 730 135 HOH HOH X . D 4 HOH 131 731 136 HOH HOH X . D 4 HOH 132 732 137 HOH HOH X . D 4 HOH 133 733 138 HOH HOH X . D 4 HOH 134 734 139 HOH HOH X . D 4 HOH 135 735 140 HOH HOH X . D 4 HOH 136 736 141 HOH HOH X . D 4 HOH 137 737 142 HOH HOH X . D 4 HOH 138 738 143 HOH HOH X . D 4 HOH 139 739 144 HOH HOH X . D 4 HOH 140 740 145 HOH HOH X . D 4 HOH 141 741 146 HOH HOH X . D 4 HOH 142 742 147 HOH HOH X . D 4 HOH 143 743 148 HOH HOH X . D 4 HOH 144 744 149 HOH HOH X . D 4 HOH 145 745 150 HOH HOH X . D 4 HOH 146 746 151 HOH HOH X . D 4 HOH 147 747 152 HOH HOH X . D 4 HOH 148 748 153 HOH HOH X . D 4 HOH 149 749 154 HOH HOH X . D 4 HOH 150 750 155 HOH HOH X . D 4 HOH 151 751 156 HOH HOH X . D 4 HOH 152 752 157 HOH HOH X . D 4 HOH 153 753 158 HOH HOH X . D 4 HOH 154 754 159 HOH HOH X . D 4 HOH 155 755 160 HOH HOH X . D 4 HOH 156 756 161 HOH HOH X . D 4 HOH 157 757 162 HOH HOH X . D 4 HOH 158 758 163 HOH HOH X . D 4 HOH 159 759 164 HOH HOH X . D 4 HOH 160 760 165 HOH HOH X . D 4 HOH 161 761 166 HOH HOH X . D 4 HOH 162 762 167 HOH HOH X . D 4 HOH 163 763 168 HOH HOH X . D 4 HOH 164 764 169 HOH HOH X . D 4 HOH 165 765 170 HOH HOH X . D 4 HOH 166 766 171 HOH HOH X . D 4 HOH 167 767 172 HOH HOH X . D 4 HOH 168 768 173 HOH HOH X . D 4 HOH 169 769 174 HOH HOH X . D 4 HOH 170 770 175 HOH HOH X . D 4 HOH 171 771 176 HOH HOH X . D 4 HOH 172 772 177 HOH HOH X . D 4 HOH 173 773 178 HOH HOH X . D 4 HOH 174 774 179 HOH HOH X . D 4 HOH 175 775 180 HOH HOH X . D 4 HOH 176 776 181 HOH HOH X . D 4 HOH 177 777 182 HOH HOH X . D 4 HOH 178 778 183 HOH HOH X . D 4 HOH 179 779 184 HOH HOH X . D 4 HOH 180 780 185 HOH HOH X . D 4 HOH 181 781 186 HOH HOH X . D 4 HOH 182 782 187 HOH HOH X . D 4 HOH 183 783 188 HOH HOH X . D 4 HOH 184 784 189 HOH HOH X . D 4 HOH 185 785 190 HOH HOH X . D 4 HOH 186 786 191 HOH HOH X . D 4 HOH 187 787 192 HOH HOH X . D 4 HOH 188 788 193 HOH HOH X . D 4 HOH 189 789 194 HOH HOH X . D 4 HOH 190 790 195 HOH HOH X . D 4 HOH 191 791 196 HOH HOH X . D 4 HOH 192 792 197 HOH HOH X . D 4 HOH 193 793 198 HOH HOH X . D 4 HOH 194 794 199 HOH HOH X . D 4 HOH 195 795 200 HOH HOH X . D 4 HOH 196 796 201 HOH HOH X . D 4 HOH 197 797 202 HOH HOH X . D 4 HOH 198 798 203 HOH HOH X . D 4 HOH 199 799 204 HOH HOH X . D 4 HOH 200 800 205 HOH HOH X . D 4 HOH 201 801 206 HOH HOH X . D 4 HOH 202 802 207 HOH HOH X . D 4 HOH 203 803 208 HOH HOH X . D 4 HOH 204 804 209 HOH HOH X . D 4 HOH 205 805 210 HOH HOH X . D 4 HOH 206 806 211 HOH HOH X . D 4 HOH 207 807 212 HOH HOH X . D 4 HOH 208 808 213 HOH HOH X . D 4 HOH 209 809 214 HOH HOH X . D 4 HOH 210 810 215 HOH HOH X . D 4 HOH 211 811 216 HOH HOH X . D 4 HOH 212 812 217 HOH HOH X . D 4 HOH 213 813 218 HOH HOH X . D 4 HOH 214 814 219 HOH HOH X . D 4 HOH 215 815 220 HOH HOH X . D 4 HOH 216 816 221 HOH HOH X . D 4 HOH 217 817 222 HOH HOH X . D 4 HOH 218 818 223 HOH HOH X . D 4 HOH 219 819 224 HOH HOH X . D 4 HOH 220 820 225 HOH HOH X . D 4 HOH 221 821 226 HOH HOH X . D 4 HOH 222 822 227 HOH HOH X . D 4 HOH 223 823 228 HOH HOH X . D 4 HOH 224 824 229 HOH HOH X . D 4 HOH 225 825 230 HOH HOH X . D 4 HOH 226 826 231 HOH HOH X . D 4 HOH 227 827 232 HOH HOH X . D 4 HOH 228 828 233 HOH HOH X . D 4 HOH 229 829 234 HOH HOH X . D 4 HOH 230 830 235 HOH HOH X . D 4 HOH 231 831 236 HOH HOH X . D 4 HOH 232 832 237 HOH HOH X . D 4 HOH 233 833 238 HOH HOH X . D 4 HOH 234 834 239 HOH HOH X . D 4 HOH 235 835 240 HOH HOH X . D 4 HOH 236 836 241 HOH HOH X . D 4 HOH 237 837 242 HOH HOH X . D 4 HOH 238 838 243 HOH HOH X . D 4 HOH 239 839 244 HOH HOH X . D 4 HOH 240 840 245 HOH HOH X . D 4 HOH 241 841 246 HOH HOH X . D 4 HOH 242 842 247 HOH HOH X . D 4 HOH 243 843 248 HOH HOH X . D 4 HOH 244 844 249 HOH HOH X . D 4 HOH 245 845 250 HOH HOH X . D 4 HOH 246 846 251 HOH HOH X . D 4 HOH 247 847 252 HOH HOH X . D 4 HOH 248 848 254 HOH HOH X . D 4 HOH 249 849 255 HOH HOH X . D 4 HOH 250 850 256 HOH HOH X . D 4 HOH 251 851 257 HOH HOH X . D 4 HOH 252 852 258 HOH HOH X . D 4 HOH 253 853 259 HOH HOH X . D 4 HOH 254 854 260 HOH HOH X . D 4 HOH 255 855 261 HOH HOH X . D 4 HOH 256 856 262 HOH HOH X . D 4 HOH 257 857 263 HOH HOH X . D 4 HOH 258 858 264 HOH HOH X . D 4 HOH 259 859 265 HOH HOH X . D 4 HOH 260 860 266 HOH HOH X . D 4 HOH 261 861 267 HOH HOH X . D 4 HOH 262 862 268 HOH HOH X . D 4 HOH 263 863 269 HOH HOH X . D 4 HOH 264 864 270 HOH HOH X . D 4 HOH 265 865 271 HOH HOH X . D 4 HOH 266 866 272 HOH HOH X . D 4 HOH 267 867 273 HOH HOH X . D 4 HOH 268 868 274 HOH HOH X . D 4 HOH 269 869 275 HOH HOH X . D 4 HOH 270 870 276 HOH HOH X . D 4 HOH 271 871 277 HOH HOH X . D 4 HOH 272 872 278 HOH HOH X . D 4 HOH 273 873 279 HOH HOH X . D 4 HOH 274 874 280 HOH HOH X . D 4 HOH 275 875 281 HOH HOH X . D 4 HOH 276 876 282 HOH HOH X . D 4 HOH 277 877 283 HOH HOH X . D 4 HOH 278 878 284 HOH HOH X . D 4 HOH 279 879 285 HOH HOH X . D 4 HOH 280 880 286 HOH HOH X . D 4 HOH 281 881 287 HOH HOH X . D 4 HOH 282 882 288 HOH HOH X . D 4 HOH 283 883 289 HOH HOH X . D 4 HOH 284 884 290 HOH HOH X . D 4 HOH 285 885 291 HOH HOH X . D 4 HOH 286 886 292 HOH HOH X . D 4 HOH 287 887 293 HOH HOH X . D 4 HOH 288 888 294 HOH HOH X . D 4 HOH 289 889 295 HOH HOH X . D 4 HOH 290 890 296 HOH HOH X . D 4 HOH 291 891 297 HOH HOH X . D 4 HOH 292 892 298 HOH HOH X . D 4 HOH 293 893 299 HOH HOH X . D 4 HOH 294 894 300 HOH HOH X . D 4 HOH 295 895 301 HOH HOH X . D 4 HOH 296 896 302 HOH HOH X . D 4 HOH 297 897 303 HOH HOH X . D 4 HOH 298 898 304 HOH HOH X . D 4 HOH 299 899 305 HOH HOH X . D 4 HOH 300 900 306 HOH HOH X . D 4 HOH 301 901 307 HOH HOH X . D 4 HOH 302 902 308 HOH HOH X . D 4 HOH 303 903 309 HOH HOH X . D 4 HOH 304 904 310 HOH HOH X . D 4 HOH 305 905 311 HOH HOH X . D 4 HOH 306 906 312 HOH HOH X . D 4 HOH 307 907 313 HOH HOH X . D 4 HOH 308 908 314 HOH HOH X . D 4 HOH 309 909 315 HOH HOH X . D 4 HOH 310 910 316 HOH HOH X . D 4 HOH 311 911 317 HOH HOH X . D 4 HOH 312 912 318 HOH HOH X . D 4 HOH 313 913 319 HOH HOH X . D 4 HOH 314 914 320 HOH HOH X . D 4 HOH 315 915 321 HOH HOH X . D 4 HOH 316 916 322 HOH HOH X . D 4 HOH 317 917 323 HOH HOH X . D 4 HOH 318 918 324 HOH HOH X . D 4 HOH 319 919 325 HOH HOH X . D 4 HOH 320 920 326 HOH HOH X . D 4 HOH 321 921 327 HOH HOH X . D 4 HOH 322 922 328 HOH HOH X . D 4 HOH 323 923 329 HOH HOH X . D 4 HOH 324 924 330 HOH HOH X . D 4 HOH 325 925 331 HOH HOH X . D 4 HOH 326 926 332 HOH HOH X . D 4 HOH 327 927 333 HOH HOH X . D 4 HOH 328 928 334 HOH HOH X . D 4 HOH 329 929 335 HOH HOH X . D 4 HOH 330 930 336 HOH HOH X . D 4 HOH 331 931 337 HOH HOH X . D 4 HOH 332 932 338 HOH HOH X . D 4 HOH 333 933 339 HOH HOH X . D 4 HOH 334 934 340 HOH HOH X . D 4 HOH 335 935 341 HOH HOH X . D 4 HOH 336 936 342 HOH HOH X . D 4 HOH 337 937 343 HOH HOH X . D 4 HOH 338 938 344 HOH HOH X . D 4 HOH 339 939 345 HOH HOH X . D 4 HOH 340 940 346 HOH HOH X . D 4 HOH 341 941 348 HOH HOH X . D 4 HOH 342 942 349 HOH HOH X . D 4 HOH 343 943 350 HOH HOH X . D 4 HOH 344 944 351 HOH HOH X . D 4 HOH 345 945 352 HOH HOH X . D 4 HOH 346 946 353 HOH HOH X . D 4 HOH 347 947 354 HOH HOH X . D 4 HOH 348 948 355 HOH HOH X . D 4 HOH 349 949 356 HOH HOH X . D 4 HOH 350 950 357 HOH HOH X . D 4 HOH 351 951 358 HOH HOH X . D 4 HOH 352 952 361 HOH HOH X . D 4 HOH 353 953 362 HOH HOH X . D 4 HOH 354 954 363 HOH HOH X . D 4 HOH 355 955 364 HOH HOH X . D 4 HOH 356 956 365 HOH HOH X . D 4 HOH 357 957 366 HOH HOH X . D 4 HOH 358 958 367 HOH HOH X . D 4 HOH 359 959 368 HOH HOH X . D 4 HOH 360 960 369 HOH HOH X . D 4 HOH 361 961 371 HOH HOH X . D 4 HOH 362 962 373 HOH HOH X . D 4 HOH 363 963 374 HOH HOH X . D 4 HOH 364 964 375 HOH HOH X . D 4 HOH 365 965 376 HOH HOH X . D 4 HOH 366 966 377 HOH HOH X . D 4 HOH 367 967 379 HOH HOH X . D 4 HOH 368 968 380 HOH HOH X . D 4 HOH 369 969 382 HOH HOH X . D 4 HOH 370 970 384 HOH HOH X . D 4 HOH 371 971 385 HOH HOH X . D 4 HOH 372 972 388 HOH HOH X . D 4 HOH 373 973 389 HOH HOH X . D 4 HOH 374 974 390 HOH HOH X . D 4 HOH 375 975 394 HOH HOH X . D 4 HOH 376 976 395 HOH HOH X . D 4 HOH 377 977 397 HOH HOH X . D 4 HOH 378 978 398 HOH HOH X . D 4 HOH 379 979 400 HOH HOH X . D 4 HOH 380 980 402 HOH HOH X . D 4 HOH 381 981 403 HOH HOH X . D 4 HOH 382 982 404 HOH HOH X . D 4 HOH 383 983 405 HOH HOH X . D 4 HOH 384 984 406 HOH HOH X . D 4 HOH 385 985 407 HOH HOH X . D 4 HOH 386 986 408 HOH HOH X . D 4 HOH 387 987 409 HOH HOH X . D 4 HOH 388 988 410 HOH HOH X . D 4 HOH 389 989 415 HOH HOH X . D 4 HOH 390 990 416 HOH HOH X . D 4 HOH 391 991 418 HOH HOH X . D 4 HOH 392 992 419 HOH HOH X . D 4 HOH 393 993 420 HOH HOH X . D 4 HOH 394 994 421 HOH HOH X . D 4 HOH 395 995 422 HOH HOH X . D 4 HOH 396 996 423 HOH HOH X . D 4 HOH 397 997 424 HOH HOH X . D 4 HOH 398 998 425 HOH HOH X . D 4 HOH 399 999 426 HOH HOH X . D 4 HOH 400 1000 427 HOH HOH X . D 4 HOH 401 1001 430 HOH HOH X . D 4 HOH 402 1002 431 HOH HOH X . D 4 HOH 403 1003 432 HOH HOH X . D 4 HOH 404 1004 433 HOH HOH X . D 4 HOH 405 1005 434 HOH HOH X . D 4 HOH 406 1006 435 HOH HOH X . D 4 HOH 407 1007 436 HOH HOH X . D 4 HOH 408 1008 437 HOH HOH X . D 4 HOH 409 1009 438 HOH HOH X . D 4 HOH 410 1010 439 HOH HOH X . D 4 HOH 411 1011 440 HOH HOH X . D 4 HOH 412 1012 441 HOH HOH X . D 4 HOH 413 1013 442 HOH HOH X . D 4 HOH 414 1014 451 HOH HOH X . D 4 HOH 415 1015 2 HOH HOH X . D 4 HOH 416 1016 3 HOH HOH X . D 4 HOH 417 1017 4 HOH HOH X . D 4 HOH 418 1018 5 HOH HOH X . D 4 HOH 419 1019 6 HOH HOH X . D 4 HOH 420 1020 7 HOH HOH X . D 4 HOH 421 1021 8 HOH HOH X . D 4 HOH 422 1022 9 HOH HOH X . D 4 HOH 423 1023 10 HOH HOH X . D 4 HOH 424 1024 11 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 305 ? X GLU 305 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A GLY 279 ? X GLY 279 ? 1_555 97.6 ? 2 OE1 ? A GLU 305 ? X GLU 305 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A CYS 278 ? X CYS 278 ? 1_555 94.1 ? 3 O ? A GLY 279 ? X GLY 279 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A CYS 278 ? X CYS 278 ? 1_555 79.9 ? 4 OE1 ? A GLU 305 ? X GLU 305 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A SER 309 ? X SER 309 ? 1_555 77.5 ? 5 O ? A GLY 279 ? X GLY 279 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A SER 309 ? X SER 309 ? 1_555 154.3 ? 6 O ? A CYS 278 ? X CYS 278 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A SER 309 ? X SER 309 ? 1_555 125.4 ? 7 OE1 ? A GLU 305 ? X GLU 305 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A LEU 340 ? X LEU 340 ? 1_555 158.3 ? 8 O ? A GLY 279 ? X GLY 279 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A LEU 340 ? X LEU 340 ? 1_555 102.4 ? 9 O ? A CYS 278 ? X CYS 278 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A LEU 340 ? X LEU 340 ? 1_555 81.3 ? 10 O ? A SER 309 ? X SER 309 ? 1_555 K ? C K . ? X K 502 ? 1_555 O ? A LEU 340 ? X LEU 340 ? 1_555 87.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-18 2 'Structure model' 1 1 2012-02-08 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 DENZO . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 DMMulti . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O1P X PLP 501 ? ? O X HOH 839 ? ? 1.84 2 1 O X HOH 1014 ? ? O X HOH 1020 ? ? 1.99 3 1 CD2 X HIS 298 ? ? O X HOH 972 ? ? 2.04 4 1 OD2 X ASP 238 ? ? O X HOH 971 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 X _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 186 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 X _pdbx_validate_rmsd_angle.auth_comp_id_2 VAL _pdbx_validate_rmsd_angle.auth_seq_id_2 186 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 X _pdbx_validate_rmsd_angle.auth_comp_id_3 VAL _pdbx_validate_rmsd_angle.auth_seq_id_3 186 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 98.87 _pdbx_validate_rmsd_angle.angle_target_value 111.40 _pdbx_validate_rmsd_angle.angle_deviation -12.53 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS X 107 ? ? -90.49 58.42 2 1 ILE X 113 ? ? 76.86 -55.11 3 1 ARG X 120 ? ? -82.71 -74.13 4 1 ALA X 194 ? ? 58.25 138.55 5 1 TYR X 212 ? ? -118.08 -140.83 6 1 GLU X 213 ? ? -165.53 18.78 7 1 SER X 309 ? ? -145.27 54.02 8 1 HIS X 321 ? ? 51.48 -123.48 9 1 SER X 346 ? ? -38.09 149.91 10 1 PHE X 348 ? ? -152.97 -21.97 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 THR _pdbx_validate_peptide_omega.auth_asym_id_1 X _pdbx_validate_peptide_omega.auth_seq_id_1 73 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 X _pdbx_validate_peptide_omega.auth_seq_id_2 74 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -137.44 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X GLN 12 ? CG ? A GLN 12 CG 2 1 Y 1 X GLN 12 ? CD ? A GLN 12 CD 3 1 Y 1 X GLN 12 ? OE1 ? A GLN 12 OE1 4 1 Y 1 X GLN 12 ? NE2 ? A GLN 12 NE2 5 1 Y 1 X GLU 221 ? CD ? A GLU 221 CD 6 1 Y 1 X GLU 221 ? OE1 ? A GLU 221 OE1 7 1 Y 1 X GLU 221 ? OE2 ? A GLU 221 OE2 8 1 Y 1 X LYS 225 ? CD ? A LYS 225 CD 9 1 Y 1 X LYS 225 ? CE ? A LYS 225 CE 10 1 Y 1 X LYS 225 ? NZ ? A LYS 225 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X MET 1 ? A MET 1 2 1 Y 1 X GLU 2 ? A GLU 2 3 1 Y 1 X ASN 3 ? A ASN 3 4 1 Y 1 X ALA 4 ? A ALA 4 5 1 Y 1 X LYS 5 ? A LYS 5 6 1 Y 1 X MET 6 ? A MET 6 7 1 Y 1 X ASN 7 ? A ASN 7 8 1 Y 1 X SER 8 ? A SER 8 9 1 Y 1 X LEU 9 ? A LEU 9 10 1 Y 1 X ILE 10 ? A ILE 10 11 1 Y 1 X ALA 11 ? A ALA 11 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "PYRIDOXAL-5'-PHOSPHATE" PLP 3 'POTASSIUM ION' K 4 water HOH #