data_3SSD # _entry.id 3SSD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SSD pdb_00003ssd 10.2210/pdb3ssd/pdb NDB NA1237 ? ? RCSB RCSB066592 ? ? WWPDB D_1000066592 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 1 1 2012-09-05 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' diffrn_source 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3SSD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-07-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SSC . unspecified PDB 3SSE . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sukackaite, R.' 1 'Grazulis, S.' 2 'Siksnys, V.' 3 # _citation.id primary _citation.title 'The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 7552 _citation.page_last 7562 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22570415 _citation.pdbx_database_id_DOI 10.1093/nar/gks332 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sukackaite, R.' 1 ? primary 'Grazulis, S.' 2 ? primary 'Tamulaitis, G.' 3 ? primary 'Siksnys, V.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '5-methylcytosine-specific restriction enzyme B' 19659.920 2 3.1.21.- ? 'N-terminal DNA binding domain' ? 2 polymer syn ;DNA (5'-D(*T*GP*AP*GP*AP*(5CM)P*CP*GP*GP*TP*AP*GP*C)-3') ; 4030.650 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*A*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3') ; 3927.561 1 ? ? ? ? 4 water nat water 18.015 136 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name EcoKMcrBC # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAY GISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIP PLEGHHHHHH ; ;MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAY GISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIP PLEGHHHHHH ; A,B ? 2 polydeoxyribonucleotide no yes '(DT)(DG)(DA)(DG)(DA)(5CM)(DC)(DG)(DG)(DT)(DA)(DG)(DC)' TGAGACCGGTAGC C ? 3 polydeoxyribonucleotide no no '(DA)(DG)(DC)(DT)(DA)(DC)(DC)(DG)(DG)(DT)(DC)(DT)(DC)' AGCTACCGGTCTC D ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 SER n 1 4 ILE n 1 5 GLN n 1 6 PRO n 1 7 TRP n 1 8 ILE n 1 9 GLU n 1 10 LYS n 1 11 PHE n 1 12 ILE n 1 13 LYS n 1 14 GLN n 1 15 ALA n 1 16 GLN n 1 17 GLN n 1 18 GLN n 1 19 ARG n 1 20 SER n 1 21 GLN n 1 22 SER n 1 23 THR n 1 24 LYS n 1 25 ASP n 1 26 TYR n 1 27 PRO n 1 28 THR n 1 29 SER n 1 30 TYR n 1 31 ARG n 1 32 ASN n 1 33 LEU n 1 34 ARG n 1 35 VAL n 1 36 LYS n 1 37 LEU n 1 38 SER n 1 39 PHE n 1 40 GLY n 1 41 TYR n 1 42 GLY n 1 43 ASN n 1 44 PHE n 1 45 THR n 1 46 SER n 1 47 ILE n 1 48 PRO n 1 49 TRP n 1 50 PHE n 1 51 ALA n 1 52 PHE n 1 53 LEU n 1 54 GLY n 1 55 GLU n 1 56 GLY n 1 57 GLN n 1 58 GLU n 1 59 ALA n 1 60 SER n 1 61 ASN n 1 62 GLY n 1 63 ILE n 1 64 TYR n 1 65 PRO n 1 66 VAL n 1 67 ILE n 1 68 LEU n 1 69 TYR n 1 70 TYR n 1 71 LYS n 1 72 ASP n 1 73 PHE n 1 74 ASP n 1 75 GLU n 1 76 LEU n 1 77 VAL n 1 78 LEU n 1 79 ALA n 1 80 TYR n 1 81 GLY n 1 82 ILE n 1 83 SER n 1 84 ASP n 1 85 THR n 1 86 ASN n 1 87 GLU n 1 88 PRO n 1 89 HIS n 1 90 ALA n 1 91 GLN n 1 92 TRP n 1 93 GLN n 1 94 PHE n 1 95 SER n 1 96 SER n 1 97 ASP n 1 98 ILE n 1 99 PRO n 1 100 LYS n 1 101 THR n 1 102 ILE n 1 103 ALA n 1 104 GLU n 1 105 TYR n 1 106 PHE n 1 107 GLN n 1 108 ALA n 1 109 THR n 1 110 SER n 1 111 GLY n 1 112 VAL n 1 113 TYR n 1 114 PRO n 1 115 LYS n 1 116 LYS n 1 117 TYR n 1 118 GLY n 1 119 GLN n 1 120 SER n 1 121 TYR n 1 122 TYR n 1 123 ALA n 1 124 CYS n 1 125 SER n 1 126 GLN n 1 127 LYS n 1 128 VAL n 1 129 SER n 1 130 GLN n 1 131 GLY n 1 132 ILE n 1 133 ASP n 1 134 TYR n 1 135 THR n 1 136 ARG n 1 137 PHE n 1 138 ALA n 1 139 SER n 1 140 MET n 1 141 LEU n 1 142 ASP n 1 143 ASN n 1 144 ILE n 1 145 ILE n 1 146 ASN n 1 147 ASP n 1 148 TYR n 1 149 LYS n 1 150 LEU n 1 151 ILE n 1 152 PHE n 1 153 ASN n 1 154 SER n 1 155 GLY n 1 156 LYS n 1 157 SER n 1 158 VAL n 1 159 ILE n 1 160 PRO n 1 161 PRO n 1 162 LEU n 1 163 GLU n 1 164 GLY n 1 165 HIS n 1 166 HIS n 1 167 HIS n 1 168 HIS n 1 169 HIS n 1 170 HIS n 2 1 DT n 2 2 DG n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 5CM n 2 7 DC n 2 8 DG n 2 9 DG n 2 10 DT n 2 11 DA n 2 12 DG n 2 13 DC n 3 1 DA n 3 2 DG n 3 3 DC n 3 4 DT n 3 5 DA n 3 6 DC n 3 7 DC n 3 8 DG n 3 9 DG n 3 10 DT n 3 11 DC n 3 12 DT n 3 13 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mcrB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER2267 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBAD24 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 TYR 121 121 121 TYR TYR A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 TYR 134 134 134 TYR TYR A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 MET 140 140 140 MET MET A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 TYR 148 148 148 TYR TYR A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 SER 157 157 ? ? ? A . n A 1 158 VAL 158 158 ? ? ? A . n A 1 159 ILE 159 159 ? ? ? A . n A 1 160 PRO 160 160 ? ? ? A . n A 1 161 PRO 161 161 ? ? ? A . n A 1 162 LEU 162 162 ? ? ? A . n A 1 163 GLU 163 163 ? ? ? A . n A 1 164 GLY 164 164 ? ? ? A . n A 1 165 HIS 165 165 ? ? ? A . n A 1 166 HIS 166 166 ? ? ? A . n A 1 167 HIS 167 167 ? ? ? A . n A 1 168 HIS 168 168 ? ? ? A . n A 1 169 HIS 169 169 ? ? ? A . n A 1 170 HIS 170 170 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLU 2 2 ? ? ? B . n B 1 3 SER 3 3 3 SER SER B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 GLN 5 5 5 GLN GLN B . n B 1 6 PRO 6 6 6 PRO PRO B . n B 1 7 TRP 7 7 7 TRP TRP B . n B 1 8 ILE 8 8 8 ILE ILE B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 PHE 11 11 11 PHE PHE B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 GLN 14 14 14 GLN GLN B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 GLN 16 16 16 GLN GLN B . n B 1 17 GLN 17 17 17 GLN GLN B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 SER 22 22 22 SER SER B . n B 1 23 THR 23 23 23 THR THR B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 TYR 26 26 26 TYR TYR B . n B 1 27 PRO 27 27 27 PRO PRO B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 ARG 31 31 31 ARG ARG B . n B 1 32 ASN 32 32 32 ASN ASN B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 PHE 39 39 39 PHE PHE B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 TYR 41 41 41 TYR TYR B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 PHE 44 44 44 PHE PHE B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 PRO 48 48 48 PRO PRO B . n B 1 49 TRP 49 49 49 TRP TRP B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 ALA 51 51 51 ALA ALA B . n B 1 52 PHE 52 52 52 PHE PHE B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 GLY 56 56 56 GLY GLY B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 TYR 64 64 64 TYR TYR B . n B 1 65 PRO 65 65 65 PRO PRO B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 ILE 67 67 67 ILE ILE B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 TYR 69 69 69 TYR TYR B . n B 1 70 TYR 70 70 70 TYR TYR B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 ASP 72 72 72 ASP ASP B . n B 1 73 PHE 73 73 73 PHE PHE B . n B 1 74 ASP 74 74 74 ASP ASP B . n B 1 75 GLU 75 75 75 GLU GLU B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 LEU 78 78 78 LEU LEU B . n B 1 79 ALA 79 79 79 ALA ALA B . n B 1 80 TYR 80 80 80 TYR TYR B . n B 1 81 GLY 81 81 81 GLY GLY B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 SER 83 83 83 SER SER B . n B 1 84 ASP 84 84 84 ASP ASP B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 ASN 86 86 86 ASN ASN B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 HIS 89 89 89 HIS HIS B . n B 1 90 ALA 90 90 90 ALA ALA B . n B 1 91 GLN 91 91 91 GLN GLN B . n B 1 92 TRP 92 92 92 TRP TRP B . n B 1 93 GLN 93 93 93 GLN GLN B . n B 1 94 PHE 94 94 94 PHE PHE B . n B 1 95 SER 95 95 95 SER SER B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 ASP 97 97 97 ASP ASP B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 PRO 99 99 99 PRO PRO B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 THR 101 101 101 THR THR B . n B 1 102 ILE 102 102 102 ILE ILE B . n B 1 103 ALA 103 103 103 ALA ALA B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 TYR 105 105 105 TYR TYR B . n B 1 106 PHE 106 106 106 PHE PHE B . n B 1 107 GLN 107 107 107 GLN GLN B . n B 1 108 ALA 108 108 108 ALA ALA B . n B 1 109 THR 109 109 109 THR THR B . n B 1 110 SER 110 110 110 SER SER B . n B 1 111 GLY 111 111 111 GLY GLY B . n B 1 112 VAL 112 112 112 VAL VAL B . n B 1 113 TYR 113 113 113 TYR TYR B . n B 1 114 PRO 114 114 114 PRO PRO B . n B 1 115 LYS 115 115 115 LYS LYS B . n B 1 116 LYS 116 116 116 LYS LYS B . n B 1 117 TYR 117 117 117 TYR TYR B . n B 1 118 GLY 118 118 118 GLY GLY B . n B 1 119 GLN 119 119 119 GLN GLN B . n B 1 120 SER 120 120 120 SER SER B . n B 1 121 TYR 121 121 121 TYR TYR B . n B 1 122 TYR 122 122 122 TYR TYR B . n B 1 123 ALA 123 123 123 ALA ALA B . n B 1 124 CYS 124 124 124 CYS CYS B . n B 1 125 SER 125 125 125 SER SER B . n B 1 126 GLN 126 126 126 GLN GLN B . n B 1 127 LYS 127 127 127 LYS LYS B . n B 1 128 VAL 128 128 128 VAL VAL B . n B 1 129 SER 129 129 129 SER SER B . n B 1 130 GLN 130 130 130 GLN GLN B . n B 1 131 GLY 131 131 131 GLY GLY B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 ASP 133 133 133 ASP ASP B . n B 1 134 TYR 134 134 134 TYR TYR B . n B 1 135 THR 135 135 135 THR THR B . n B 1 136 ARG 136 136 136 ARG ARG B . n B 1 137 PHE 137 137 137 PHE PHE B . n B 1 138 ALA 138 138 138 ALA ALA B . n B 1 139 SER 139 139 139 SER SER B . n B 1 140 MET 140 140 140 MET MET B . n B 1 141 LEU 141 141 141 LEU LEU B . n B 1 142 ASP 142 142 142 ASP ASP B . n B 1 143 ASN 143 143 143 ASN ASN B . n B 1 144 ILE 144 144 144 ILE ILE B . n B 1 145 ILE 145 145 145 ILE ILE B . n B 1 146 ASN 146 146 146 ASN ASN B . n B 1 147 ASP 147 147 147 ASP ASP B . n B 1 148 TYR 148 148 148 TYR TYR B . n B 1 149 LYS 149 149 149 LYS LYS B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 ILE 151 151 ? ? ? B . n B 1 152 PHE 152 152 ? ? ? B . n B 1 153 ASN 153 153 ? ? ? B . n B 1 154 SER 154 154 ? ? ? B . n B 1 155 GLY 155 155 ? ? ? B . n B 1 156 LYS 156 156 ? ? ? B . n B 1 157 SER 157 157 ? ? ? B . n B 1 158 VAL 158 158 ? ? ? B . n B 1 159 ILE 159 159 ? ? ? B . n B 1 160 PRO 160 160 ? ? ? B . n B 1 161 PRO 161 161 ? ? ? B . n B 1 162 LEU 162 162 ? ? ? B . n B 1 163 GLU 163 163 ? ? ? B . n B 1 164 GLY 164 164 ? ? ? B . n B 1 165 HIS 165 165 ? ? ? B . n B 1 166 HIS 166 166 ? ? ? B . n B 1 167 HIS 167 167 ? ? ? B . n B 1 168 HIS 168 168 ? ? ? B . n B 1 169 HIS 169 169 ? ? ? B . n B 1 170 HIS 170 170 ? ? ? B . n C 2 1 DT 1 1 ? ? ? C . n C 2 2 DG 2 2 2 DG DG C . n C 2 3 DA 3 3 3 DA DA C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 5CM 6 6 6 5CM 5CM C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DG 8 8 8 DG DG C . n C 2 9 DG 9 9 9 DG DG C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DA 11 11 11 DA DA C . n C 2 12 DG 12 12 12 DG DG C . n C 2 13 DC 13 13 13 DC DC C . n D 3 1 DA 1 1 ? ? ? D . n D 3 2 DG 2 2 2 DG DG D . n D 3 3 DC 3 3 3 DC DC D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 DA 5 5 5 DA DA D . n D 3 6 DC 6 6 6 DC DC D . n D 3 7 DC 7 7 7 DC DC D . n D 3 8 DG 8 8 8 DG DG D . n D 3 9 DG 9 9 9 DG DG D . n D 3 10 DT 10 10 10 DT DT D . n D 3 11 DC 11 11 11 DC DC D . n D 3 12 DT 12 12 12 DT DT D . n D 3 13 DC 13 13 13 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 201 201 HOH HOH A . E 4 HOH 2 202 202 HOH HOH A . E 4 HOH 3 203 203 HOH HOH A . E 4 HOH 4 204 204 HOH HOH A . E 4 HOH 5 205 205 HOH HOH A . E 4 HOH 6 206 206 HOH HOH A . E 4 HOH 7 207 207 HOH HOH A . E 4 HOH 8 208 208 HOH HOH A . E 4 HOH 9 209 209 HOH HOH A . E 4 HOH 10 210 210 HOH HOH A . E 4 HOH 11 211 211 HOH HOH A . E 4 HOH 12 212 212 HOH HOH A . E 4 HOH 13 213 213 HOH HOH A . E 4 HOH 14 214 214 HOH HOH A . E 4 HOH 15 215 215 HOH HOH A . E 4 HOH 16 216 216 HOH HOH A . E 4 HOH 17 217 217 HOH HOH A . E 4 HOH 18 218 218 HOH HOH A . E 4 HOH 19 219 219 HOH HOH A . E 4 HOH 20 220 220 HOH HOH A . E 4 HOH 21 221 221 HOH HOH A . E 4 HOH 22 222 222 HOH HOH A . E 4 HOH 23 223 223 HOH HOH A . E 4 HOH 24 224 224 HOH HOH A . E 4 HOH 25 225 225 HOH HOH A . E 4 HOH 26 226 226 HOH HOH A . E 4 HOH 27 227 227 HOH HOH A . E 4 HOH 28 228 228 HOH HOH A . E 4 HOH 29 229 229 HOH HOH A . E 4 HOH 30 230 230 HOH HOH A . E 4 HOH 31 231 231 HOH HOH A . E 4 HOH 32 232 232 HOH HOH A . E 4 HOH 33 233 233 HOH HOH A . E 4 HOH 34 234 234 HOH HOH A . E 4 HOH 35 235 235 HOH HOH A . E 4 HOH 36 236 236 HOH HOH A . E 4 HOH 37 237 237 HOH HOH A . E 4 HOH 38 238 238 HOH HOH A . E 4 HOH 39 239 239 HOH HOH A . E 4 HOH 40 240 240 HOH HOH A . E 4 HOH 41 241 241 HOH HOH A . E 4 HOH 42 242 242 HOH HOH A . E 4 HOH 43 243 243 HOH HOH A . E 4 HOH 44 244 244 HOH HOH A . E 4 HOH 45 245 245 HOH HOH A . E 4 HOH 46 246 246 HOH HOH A . E 4 HOH 47 247 247 HOH HOH A . E 4 HOH 48 248 248 HOH HOH A . E 4 HOH 49 249 249 HOH HOH A . E 4 HOH 50 250 250 HOH HOH A . E 4 HOH 51 251 251 HOH HOH A . E 4 HOH 52 252 252 HOH HOH A . E 4 HOH 53 253 253 HOH HOH A . E 4 HOH 54 254 254 HOH HOH A . E 4 HOH 55 255 255 HOH HOH A . E 4 HOH 56 256 256 HOH HOH A . E 4 HOH 57 257 257 HOH HOH A . E 4 HOH 58 258 258 HOH HOH A . E 4 HOH 59 259 259 HOH HOH A . E 4 HOH 60 260 260 HOH HOH A . F 4 HOH 1 201 201 HOH HOH B . F 4 HOH 2 202 202 HOH HOH B . F 4 HOH 3 203 203 HOH HOH B . F 4 HOH 4 204 204 HOH HOH B . F 4 HOH 5 205 205 HOH HOH B . F 4 HOH 6 206 206 HOH HOH B . F 4 HOH 7 207 207 HOH HOH B . F 4 HOH 8 208 208 HOH HOH B . F 4 HOH 9 209 209 HOH HOH B . F 4 HOH 10 210 210 HOH HOH B . F 4 HOH 11 211 211 HOH HOH B . F 4 HOH 12 212 212 HOH HOH B . F 4 HOH 13 213 213 HOH HOH B . F 4 HOH 14 214 214 HOH HOH B . F 4 HOH 15 215 215 HOH HOH B . F 4 HOH 16 216 216 HOH HOH B . F 4 HOH 17 217 217 HOH HOH B . F 4 HOH 18 218 218 HOH HOH B . F 4 HOH 19 219 219 HOH HOH B . F 4 HOH 20 220 220 HOH HOH B . F 4 HOH 21 221 221 HOH HOH B . F 4 HOH 22 222 222 HOH HOH B . F 4 HOH 23 223 223 HOH HOH B . F 4 HOH 24 224 224 HOH HOH B . F 4 HOH 25 225 225 HOH HOH B . F 4 HOH 26 226 226 HOH HOH B . F 4 HOH 27 227 227 HOH HOH B . F 4 HOH 28 228 228 HOH HOH B . F 4 HOH 29 229 229 HOH HOH B . F 4 HOH 30 230 230 HOH HOH B . F 4 HOH 31 231 231 HOH HOH B . F 4 HOH 32 232 232 HOH HOH B . F 4 HOH 33 233 233 HOH HOH B . F 4 HOH 34 234 234 HOH HOH B . F 4 HOH 35 235 235 HOH HOH B . F 4 HOH 36 236 236 HOH HOH B . F 4 HOH 37 237 237 HOH HOH B . F 4 HOH 38 238 238 HOH HOH B . F 4 HOH 39 239 239 HOH HOH B . F 4 HOH 40 240 240 HOH HOH B . F 4 HOH 41 241 241 HOH HOH B . F 4 HOH 42 242 242 HOH HOH B . F 4 HOH 43 243 243 HOH HOH B . F 4 HOH 44 244 244 HOH HOH B . F 4 HOH 45 245 245 HOH HOH B . F 4 HOH 46 246 246 HOH HOH B . F 4 HOH 47 247 247 HOH HOH B . F 4 HOH 48 248 248 HOH HOH B . F 4 HOH 49 249 249 HOH HOH B . F 4 HOH 50 250 250 HOH HOH B . F 4 HOH 51 251 251 HOH HOH B . F 4 HOH 52 252 252 HOH HOH B . F 4 HOH 53 253 253 HOH HOH B . F 4 HOH 54 254 254 HOH HOH B . F 4 HOH 55 255 207 HOH HOH B . F 4 HOH 56 256 209 HOH HOH B . F 4 HOH 57 257 210 HOH HOH B . G 4 HOH 1 101 203 HOH HOH C . G 4 HOH 2 102 204 HOH HOH C . G 4 HOH 3 103 205 HOH HOH C . G 4 HOH 4 104 206 HOH HOH C . G 4 HOH 5 105 208 HOH HOH C . G 4 HOH 6 106 211 HOH HOH C . G 4 HOH 7 107 213 HOH HOH C . G 4 HOH 8 108 214 HOH HOH C . G 4 HOH 9 109 201 HOH HOH C . G 4 HOH 10 110 209 HOH HOH C . H 4 HOH 1 201 201 HOH HOH D . H 4 HOH 2 202 202 HOH HOH D . H 4 HOH 3 203 212 HOH HOH D . H 4 HOH 4 204 202 HOH HOH D . H 4 HOH 5 205 204 HOH HOH D . H 4 HOH 6 206 205 HOH HOH D . H 4 HOH 7 207 206 HOH HOH D . H 4 HOH 8 208 207 HOH HOH D . H 4 HOH 9 209 208 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DG 2 ? P ? C DG 2 P 2 1 Y 1 C DG 2 ? OP1 ? C DG 2 OP1 3 1 Y 1 C DG 2 ? OP2 ? C DG 2 OP2 4 1 Y 1 D DG 2 ? P ? D DG 2 P 5 1 Y 1 D DG 2 ? OP1 ? D DG 2 OP1 6 1 Y 1 D DG 2 ? OP2 ? D DG 2 OP2 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 SCALA 3.2.19 22/12/2005 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 MOSFLM 6.2.6 ? ? ? ? 'data reduction' ? ? ? 4 MOLREP 9.2.10 ? ? ? ? phasing ? ? ? 5 # _cell.entry_id 3SSD _cell.length_a 36.085 _cell.length_b 67.189 _cell.length_c 142.414 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SSD _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3SSD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.75 _exptl_crystal.density_percent_sol 35.5 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'sitting drop' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M LiCl, 18% PEG4000, pH 6.8, sitting drop, temperature 292K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'FLAT PANEL' _diffrn_detector.type MAR555 _diffrn_detector.pdbx_collection_date 2008-12-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.81500 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.81500 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3SSD _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 29.03 _reflns.d_resolution_high 2.20 _reflns.number_obs 18339 _reflns.number_all ? _reflns.percent_possible_obs 99.800 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rsym_value 0.070 _reflns.pdbx_netI_over_sigmaI 18.800 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.600 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 2.20 2.32 99.90 0.254 0.254 1.2 5.30 ? ? ? ? ? ? 1 2 2.32 2.46 99.80 0.213 0.213 1.9 5.40 ? ? ? ? ? ? 1 3 2.46 2.63 99.80 0.139 0.139 4.3 5.60 ? ? ? ? ? ? 1 4 2.63 2.84 99.60 0.110 0.110 4.0 5.60 ? ? ? ? ? ? 1 5 2.84 3.11 100.00 0.100 0.100 4.6 5.70 ? ? ? ? ? ? 1 6 3.11 3.48 100.00 0.068 0.068 9.0 5.90 ? ? ? ? ? ? 1 7 3.48 4.02 99.90 0.057 0.057 7.9 5.90 ? ? ? ? ? ? 1 8 4.02 4.92 99.90 0.047 0.047 11.9 5.90 ? ? ? ? ? ? 1 9 4.92 6.96 99.90 0.042 0.042 13.1 5.70 ? ? ? ? ? ? 1 10 6.96 29.03 96.80 0.054 0.054 7.8 4.80 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3SSD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16474 _refine.ls_number_reflns_all 16474 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.02 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.51 _refine.ls_R_factor_obs 0.20199 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19550 _refine.ls_R_factor_R_free 0.26221 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 1794 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.10 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.894 _refine.B_iso_mean 42.829 _refine.aniso_B[1][1] -2.57 _refine.aniso_B[2][2] 2.83 _refine.aniso_B[3][3] -0.26 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'U VALUES : RESIDUAL ONLY' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.583 _refine.pdbx_overall_ESU_R_Free 0.279 _refine.overall_SU_ML 0.189 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 14.987 _refine.overall_SU_R_Cruickshank_DPI 0.729 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2483 _refine_hist.pdbx_number_atoms_nucleic_acid 487 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 3106 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 19.02 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.017 ? 3646 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.353 1.766 ? 5140 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.620 5.000 ? 301 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.984 24.580 ? 131 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.067 15.000 ? 415 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.190 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.088 0.200 ? 493 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2507 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.143 0.200 ? 1336 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.287 0.200 ? 2232 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.083 0.200 ? 172 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.112 0.200 ? 81 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.069 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.144 1.500 ? 1509 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.826 2.000 ? 2436 'X-RAY DIFFRACTION' ? r_scbond_it 2.473 3.000 ? 2141 'X-RAY DIFFRACTION' ? r_scangle_it 3.230 4.500 ? 2710 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.256 _refine_ls_shell.number_reflns_R_work 1064 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 99.75 _refine_ls_shell.R_factor_R_free 0.336 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 122 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3SSD _struct.title 'DNA binding domain of restriction endonuclease bound to DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SSD _struct_keywords.text 'restriction endonuclease, 5-methylcytosine, base flipping, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MCRB_ECOLI P15005 1 ;MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAY GISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIP P ; 1 ? 2 PDB 3SSD 3SSD 2 TGAGACCGGTAGC ? ? 3 PDB 3SSD 3SSD 3 AGCTACCGGTCTC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SSD A 1 ? 161 ? P15005 1 ? 161 ? 1 161 2 1 3SSD B 1 ? 161 ? P15005 1 ? 161 ? 1 161 3 2 3SSD C 1 ? 13 ? 3SSD 1 ? 13 ? 1 13 4 3 3SSD D 1 ? 13 ? 3SSD 1 ? 13 ? 1 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3SSD LEU A 162 ? UNP P15005 ? ? 'expression tag' 162 1 1 3SSD GLU A 163 ? UNP P15005 ? ? 'expression tag' 163 2 1 3SSD GLY A 164 ? UNP P15005 ? ? 'expression tag' 164 3 1 3SSD HIS A 165 ? UNP P15005 ? ? 'expression tag' 165 4 1 3SSD HIS A 166 ? UNP P15005 ? ? 'expression tag' 166 5 1 3SSD HIS A 167 ? UNP P15005 ? ? 'expression tag' 167 6 1 3SSD HIS A 168 ? UNP P15005 ? ? 'expression tag' 168 7 1 3SSD HIS A 169 ? UNP P15005 ? ? 'expression tag' 169 8 1 3SSD HIS A 170 ? UNP P15005 ? ? 'expression tag' 170 9 2 3SSD LEU B 162 ? UNP P15005 ? ? 'expression tag' 162 10 2 3SSD GLU B 163 ? UNP P15005 ? ? 'expression tag' 163 11 2 3SSD GLY B 164 ? UNP P15005 ? ? 'expression tag' 164 12 2 3SSD HIS B 165 ? UNP P15005 ? ? 'expression tag' 165 13 2 3SSD HIS B 166 ? UNP P15005 ? ? 'expression tag' 166 14 2 3SSD HIS B 167 ? UNP P15005 ? ? 'expression tag' 167 15 2 3SSD HIS B 168 ? UNP P15005 ? ? 'expression tag' 168 16 2 3SSD HIS B 169 ? UNP P15005 ? ? 'expression tag' 169 17 2 3SSD HIS B 170 ? UNP P15005 ? ? 'expression tag' 170 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5140 ? 1 MORE -14 ? 1 'SSA (A^2)' 17990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 4 ? GLN A 18 ? ILE A 4 GLN A 18 1 ? 15 HELX_P HELX_P2 2 LYS A 71 ? PHE A 73 ? LYS A 71 PHE A 73 5 ? 3 HELX_P HELX_P3 3 THR A 101 ? GLY A 111 ? THR A 101 GLY A 111 1 ? 11 HELX_P HELX_P4 4 SER A 129 ? GLY A 131 ? SER A 129 GLY A 131 5 ? 3 HELX_P HELX_P5 5 ASP A 133 ? PHE A 152 ? ASP A 133 PHE A 152 1 ? 20 HELX_P HELX_P6 6 ILE B 4 ? GLN B 18 ? ILE B 4 GLN B 18 1 ? 15 HELX_P HELX_P7 7 LYS B 71 ? PHE B 73 ? LYS B 71 PHE B 73 5 ? 3 HELX_P HELX_P8 8 THR B 101 ? SER B 110 ? THR B 101 SER B 110 1 ? 10 HELX_P HELX_P9 9 SER B 129 ? GLY B 131 ? SER B 129 GLY B 131 5 ? 3 HELX_P HELX_P10 10 ASP B 133 ? LEU B 150 ? ASP B 133 LEU B 150 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DA 5 "O3'" A ? ? 1_555 C 5CM 6 P A ? C DA 5 C 5CM 6 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale both ? C DA 5 "O3'" B ? ? 1_555 C 5CM 6 P B ? C DA 5 C 5CM 6 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale3 covale both ? C 5CM 6 "O3'" A ? ? 1_555 C DC 7 P A ? C 5CM 6 C DC 7 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale4 covale both ? C 5CM 6 "O3'" B ? ? 1_555 C DC 7 P B ? C 5CM 6 C DC 7 1_555 ? ? ? ? ? ? ? 1.596 ? ? hydrog1 hydrog ? ? C DG 2 N1 A ? ? 1_555 D DC 13 N3 A ? C DG 2 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 2 N2 A ? ? 1_555 D DC 13 O2 A ? C DG 2 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 2 O6 A ? ? 1_555 D DC 13 N4 A ? C DG 2 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 3 N1 A ? ? 1_555 D DT 12 N3 A ? C DA 3 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 3 N6 A ? ? 1_555 D DT 12 O4 A ? C DA 3 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 4 N1 A ? ? 1_555 D DC 11 N3 A ? C DG 4 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 4 N2 A ? ? 1_555 D DC 11 O2 A ? C DG 4 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 4 O6 A ? ? 1_555 D DC 11 N4 A ? C DG 4 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 5 N1 A ? ? 1_555 D DT 10 N3 A ? C DA 5 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N6 A ? ? 1_555 D DT 10 O4 A ? C DA 5 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 7 N3 A ? ? 1_555 D DG 8 N1 A ? C DC 7 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 7 N4 A ? ? 1_555 D DG 8 O6 A ? C DC 7 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 7 O2 A ? ? 1_555 D DG 8 N2 A ? C DC 7 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 8 N1 A ? ? 1_555 D DC 7 N3 A ? C DG 8 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 8 N2 A ? ? 1_555 D DC 7 O2 A ? C DG 8 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 8 O6 A ? ? 1_555 D DC 7 N4 A ? C DG 8 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 10 N3 A ? ? 1_555 D DA 5 N1 A ? C DT 10 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 10 O4 A ? ? 1_555 D DA 5 N6 A ? C DT 10 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 11 N1 A ? ? 1_555 D DT 4 N3 A ? C DA 11 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 11 N6 A ? ? 1_555 D DT 4 O4 A ? C DA 11 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 12 N1 A ? ? 1_555 D DC 3 N3 A ? C DG 12 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 12 N2 A ? ? 1_555 D DC 3 O2 A ? C DG 12 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 12 O6 A ? ? 1_555 D DC 3 N4 A ? C DG 12 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 13 O2 A ? ? 1_555 D DG 2 N2 A ? C DC 13 D DG 2 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 29 ? TYR A 30 ? SER A 29 TYR A 30 A 2 LEU A 33 ? GLY A 40 ? LEU A 33 GLY A 40 A 3 PHE A 44 ? LEU A 53 ? PHE A 44 LEU A 53 A 4 ILE A 63 ? TYR A 70 ? ILE A 63 TYR A 70 A 5 GLU A 75 ? ILE A 82 ? GLU A 75 ILE A 82 A 6 TYR A 121 ? LYS A 127 ? TYR A 121 LYS A 127 B 1 SER B 29 ? TYR B 30 ? SER B 29 TYR B 30 B 2 LEU B 33 ? SER B 38 ? LEU B 33 SER B 38 B 3 TRP B 49 ? LEU B 53 ? TRP B 49 LEU B 53 B 4 ILE B 63 ? TYR B 70 ? ILE B 63 TYR B 70 B 5 GLU B 75 ? ILE B 82 ? GLU B 75 ILE B 82 B 6 TYR B 121 ? LYS B 127 ? TYR B 121 LYS B 127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 30 ? N TYR A 30 O LEU A 33 ? O LEU A 33 A 2 3 N LYS A 36 ? N LYS A 36 O ALA A 51 ? O ALA A 51 A 3 4 N PRO A 48 ? N PRO A 48 O TYR A 69 ? O TYR A 69 A 4 5 N LEU A 68 ? N LEU A 68 O VAL A 77 ? O VAL A 77 A 5 6 N LEU A 76 ? N LEU A 76 O GLN A 126 ? O GLN A 126 B 1 2 N TYR B 30 ? N TYR B 30 O LEU B 33 ? O LEU B 33 B 2 3 N LYS B 36 ? N LYS B 36 O ALA B 51 ? O ALA B 51 B 3 4 N PHE B 50 ? N PHE B 50 O ILE B 67 ? O ILE B 67 B 4 5 N LEU B 68 ? N LEU B 68 O VAL B 77 ? O VAL B 77 B 5 6 N LEU B 78 ? N LEU B 78 O CYS B 124 ? O CYS B 124 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 150 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 150 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 150 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 131.45 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 16.15 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 25 ? ? -84.64 39.34 2 1 ASN A 61 ? ? -155.42 88.55 3 1 TYR A 64 ? ? -179.35 146.60 4 1 PHE A 152 ? ? -62.16 7.45 5 1 SER A 154 ? ? -179.34 110.07 6 1 ASP B 25 ? ? -94.25 44.01 7 1 TYR B 64 ? ? -175.46 144.52 8 1 SER B 96 ? ? -144.02 -53.25 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id 5CM _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id 5CM _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 2.3122 3.7486 24.9014 0.0441 0.0029 0.0095 0.0003 -0.0083 -0.0004 5.3596 2.2350 4.3590 0.3533 0.4608 0.7113 -0.0346 -0.0890 0.1565 0.0657 -0.0403 -0.0254 -0.2241 -0.0138 0.0749 'X-RAY DIFFRACTION' 2 ? refined 5.6688 -3.1647 -19.3307 0.0581 0.0423 0.0399 -0.0162 0.0133 -0.0318 4.3746 2.8366 4.7763 0.2312 -0.2918 1.0594 -0.0110 0.0018 0.1006 -0.2441 0.0518 -0.0069 -0.2687 0.1217 -0.0408 'X-RAY DIFFRACTION' 3 ? refined 4.0030 2.0609 2.4605 0.2134 0.3883 0.3478 -0.0308 -0.0056 -0.1045 0.7163 2.2861 17.4494 0.1052 -3.4963 0.1538 0.2926 -0.0291 0.1202 -0.1617 0.0352 0.0572 -1.5112 0.1249 -0.3278 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 156 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 3 ? ? B 150 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 2 ? ? C 13 ? ? ? ? 'X-RAY DIFFRACTION' 4 3 D 2 ? ? D 13 ? ? ? ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 157 ? A SER 157 3 1 Y 1 A VAL 158 ? A VAL 158 4 1 Y 1 A ILE 159 ? A ILE 159 5 1 Y 1 A PRO 160 ? A PRO 160 6 1 Y 1 A PRO 161 ? A PRO 161 7 1 Y 1 A LEU 162 ? A LEU 162 8 1 Y 1 A GLU 163 ? A GLU 163 9 1 Y 1 A GLY 164 ? A GLY 164 10 1 Y 1 A HIS 165 ? A HIS 165 11 1 Y 1 A HIS 166 ? A HIS 166 12 1 Y 1 A HIS 167 ? A HIS 167 13 1 Y 1 A HIS 168 ? A HIS 168 14 1 Y 1 A HIS 169 ? A HIS 169 15 1 Y 1 A HIS 170 ? A HIS 170 16 1 Y 1 B MET 1 ? B MET 1 17 1 Y 1 B GLU 2 ? B GLU 2 18 1 Y 1 B ILE 151 ? B ILE 151 19 1 Y 1 B PHE 152 ? B PHE 152 20 1 Y 1 B ASN 153 ? B ASN 153 21 1 Y 1 B SER 154 ? B SER 154 22 1 Y 1 B GLY 155 ? B GLY 155 23 1 Y 1 B LYS 156 ? B LYS 156 24 1 Y 1 B SER 157 ? B SER 157 25 1 Y 1 B VAL 158 ? B VAL 158 26 1 Y 1 B ILE 159 ? B ILE 159 27 1 Y 1 B PRO 160 ? B PRO 160 28 1 Y 1 B PRO 161 ? B PRO 161 29 1 Y 1 B LEU 162 ? B LEU 162 30 1 Y 1 B GLU 163 ? B GLU 163 31 1 Y 1 B GLY 164 ? B GLY 164 32 1 Y 1 B HIS 165 ? B HIS 165 33 1 Y 1 B HIS 166 ? B HIS 166 34 1 Y 1 B HIS 167 ? B HIS 167 35 1 Y 1 B HIS 168 ? B HIS 168 36 1 Y 1 B HIS 169 ? B HIS 169 37 1 Y 1 B HIS 170 ? B HIS 170 38 1 Y 1 C DT 1 ? C DT 1 39 1 Y 1 D DA 1 ? D DA 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 PHE N N N N 430 PHE CA C N S 431 PHE C C N N 432 PHE O O N N 433 PHE CB C N N 434 PHE CG C Y N 435 PHE CD1 C Y N 436 PHE CD2 C Y N 437 PHE CE1 C Y N 438 PHE CE2 C Y N 439 PHE CZ C Y N 440 PHE OXT O N N 441 PHE H H N N 442 PHE H2 H N N 443 PHE HA H N N 444 PHE HB2 H N N 445 PHE HB3 H N N 446 PHE HD1 H N N 447 PHE HD2 H N N 448 PHE HE1 H N N 449 PHE HE2 H N N 450 PHE HZ H N N 451 PHE HXT H N N 452 PRO N N N N 453 PRO CA C N S 454 PRO C C N N 455 PRO O O N N 456 PRO CB C N N 457 PRO CG C N N 458 PRO CD C N N 459 PRO OXT O N N 460 PRO H H N N 461 PRO HA H N N 462 PRO HB2 H N N 463 PRO HB3 H N N 464 PRO HG2 H N N 465 PRO HG3 H N N 466 PRO HD2 H N N 467 PRO HD3 H N N 468 PRO HXT H N N 469 SER N N N N 470 SER CA C N S 471 SER C C N N 472 SER O O N N 473 SER CB C N N 474 SER OG O N N 475 SER OXT O N N 476 SER H H N N 477 SER H2 H N N 478 SER HA H N N 479 SER HB2 H N N 480 SER HB3 H N N 481 SER HG H N N 482 SER HXT H N N 483 THR N N N N 484 THR CA C N S 485 THR C C N N 486 THR O O N N 487 THR CB C N R 488 THR OG1 O N N 489 THR CG2 C N N 490 THR OXT O N N 491 THR H H N N 492 THR H2 H N N 493 THR HA H N N 494 THR HB H N N 495 THR HG1 H N N 496 THR HG21 H N N 497 THR HG22 H N N 498 THR HG23 H N N 499 THR HXT H N N 500 TRP N N N N 501 TRP CA C N S 502 TRP C C N N 503 TRP O O N N 504 TRP CB C N N 505 TRP CG C Y N 506 TRP CD1 C Y N 507 TRP CD2 C Y N 508 TRP NE1 N Y N 509 TRP CE2 C Y N 510 TRP CE3 C Y N 511 TRP CZ2 C Y N 512 TRP CZ3 C Y N 513 TRP CH2 C Y N 514 TRP OXT O N N 515 TRP H H N N 516 TRP H2 H N N 517 TRP HA H N N 518 TRP HB2 H N N 519 TRP HB3 H N N 520 TRP HD1 H N N 521 TRP HE1 H N N 522 TRP HE3 H N N 523 TRP HZ2 H N N 524 TRP HZ3 H N N 525 TRP HH2 H N N 526 TRP HXT H N N 527 TYR N N N N 528 TYR CA C N S 529 TYR C C N N 530 TYR O O N N 531 TYR CB C N N 532 TYR CG C Y N 533 TYR CD1 C Y N 534 TYR CD2 C Y N 535 TYR CE1 C Y N 536 TYR CE2 C Y N 537 TYR CZ C Y N 538 TYR OH O N N 539 TYR OXT O N N 540 TYR H H N N 541 TYR H2 H N N 542 TYR HA H N N 543 TYR HB2 H N N 544 TYR HB3 H N N 545 TYR HD1 H N N 546 TYR HD2 H N N 547 TYR HE1 H N N 548 TYR HE2 H N N 549 TYR HH H N N 550 TYR HXT H N N 551 VAL N N N N 552 VAL CA C N S 553 VAL C C N N 554 VAL O O N N 555 VAL CB C N N 556 VAL CG1 C N N 557 VAL CG2 C N N 558 VAL OXT O N N 559 VAL H H N N 560 VAL H2 H N N 561 VAL HA H N N 562 VAL HB H N N 563 VAL HG11 H N N 564 VAL HG12 H N N 565 VAL HG13 H N N 566 VAL HG21 H N N 567 VAL HG22 H N N 568 VAL HG23 H N N 569 VAL HXT H N N 570 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 CYS N CA sing N N 108 CYS N H sing N N 109 CYS N H2 sing N N 110 CYS CA C sing N N 111 CYS CA CB sing N N 112 CYS CA HA sing N N 113 CYS C O doub N N 114 CYS C OXT sing N N 115 CYS CB SG sing N N 116 CYS CB HB2 sing N N 117 CYS CB HB3 sing N N 118 CYS SG HG sing N N 119 CYS OXT HXT sing N N 120 DA OP3 P sing N N 121 DA OP3 HOP3 sing N N 122 DA P OP1 doub N N 123 DA P OP2 sing N N 124 DA P "O5'" sing N N 125 DA OP2 HOP2 sing N N 126 DA "O5'" "C5'" sing N N 127 DA "C5'" "C4'" sing N N 128 DA "C5'" "H5'" sing N N 129 DA "C5'" "H5''" sing N N 130 DA "C4'" "O4'" sing N N 131 DA "C4'" "C3'" sing N N 132 DA "C4'" "H4'" sing N N 133 DA "O4'" "C1'" sing N N 134 DA "C3'" "O3'" sing N N 135 DA "C3'" "C2'" sing N N 136 DA "C3'" "H3'" sing N N 137 DA "O3'" "HO3'" sing N N 138 DA "C2'" "C1'" sing N N 139 DA "C2'" "H2'" sing N N 140 DA "C2'" "H2''" sing N N 141 DA "C1'" N9 sing N N 142 DA "C1'" "H1'" sing N N 143 DA N9 C8 sing Y N 144 DA N9 C4 sing Y N 145 DA C8 N7 doub Y N 146 DA C8 H8 sing N N 147 DA N7 C5 sing Y N 148 DA C5 C6 sing Y N 149 DA C5 C4 doub Y N 150 DA C6 N6 sing N N 151 DA C6 N1 doub Y N 152 DA N6 H61 sing N N 153 DA N6 H62 sing N N 154 DA N1 C2 sing Y N 155 DA C2 N3 doub Y N 156 DA C2 H2 sing N N 157 DA N3 C4 sing Y N 158 DC OP3 P sing N N 159 DC OP3 HOP3 sing N N 160 DC P OP1 doub N N 161 DC P OP2 sing N N 162 DC P "O5'" sing N N 163 DC OP2 HOP2 sing N N 164 DC "O5'" "C5'" sing N N 165 DC "C5'" "C4'" sing N N 166 DC "C5'" "H5'" sing N N 167 DC "C5'" "H5''" sing N N 168 DC "C4'" "O4'" sing N N 169 DC "C4'" "C3'" sing N N 170 DC "C4'" "H4'" sing N N 171 DC "O4'" "C1'" sing N N 172 DC "C3'" "O3'" sing N N 173 DC "C3'" "C2'" sing N N 174 DC "C3'" "H3'" sing N N 175 DC "O3'" "HO3'" sing N N 176 DC "C2'" "C1'" sing N N 177 DC "C2'" "H2'" sing N N 178 DC "C2'" "H2''" sing N N 179 DC "C1'" N1 sing N N 180 DC "C1'" "H1'" sing N N 181 DC N1 C2 sing N N 182 DC N1 C6 sing N N 183 DC C2 O2 doub N N 184 DC C2 N3 sing N N 185 DC N3 C4 doub N N 186 DC C4 N4 sing N N 187 DC C4 C5 sing N N 188 DC N4 H41 sing N N 189 DC N4 H42 sing N N 190 DC C5 C6 doub N N 191 DC C5 H5 sing N N 192 DC C6 H6 sing N N 193 DG OP3 P sing N N 194 DG OP3 HOP3 sing N N 195 DG P OP1 doub N N 196 DG P OP2 sing N N 197 DG P "O5'" sing N N 198 DG OP2 HOP2 sing N N 199 DG "O5'" "C5'" sing N N 200 DG "C5'" "C4'" sing N N 201 DG "C5'" "H5'" sing N N 202 DG "C5'" "H5''" sing N N 203 DG "C4'" "O4'" sing N N 204 DG "C4'" "C3'" sing N N 205 DG "C4'" "H4'" sing N N 206 DG "O4'" "C1'" sing N N 207 DG "C3'" "O3'" sing N N 208 DG "C3'" "C2'" sing N N 209 DG "C3'" "H3'" sing N N 210 DG "O3'" "HO3'" sing N N 211 DG "C2'" "C1'" sing N N 212 DG "C2'" "H2'" sing N N 213 DG "C2'" "H2''" sing N N 214 DG "C1'" N9 sing N N 215 DG "C1'" "H1'" sing N N 216 DG N9 C8 sing Y N 217 DG N9 C4 sing Y N 218 DG C8 N7 doub Y N 219 DG C8 H8 sing N N 220 DG N7 C5 sing Y N 221 DG C5 C6 sing N N 222 DG C5 C4 doub Y N 223 DG C6 O6 doub N N 224 DG C6 N1 sing N N 225 DG N1 C2 sing N N 226 DG N1 H1 sing N N 227 DG C2 N2 sing N N 228 DG C2 N3 doub N N 229 DG N2 H21 sing N N 230 DG N2 H22 sing N N 231 DG N3 C4 sing N N 232 DT OP3 P sing N N 233 DT OP3 HOP3 sing N N 234 DT P OP1 doub N N 235 DT P OP2 sing N N 236 DT P "O5'" sing N N 237 DT OP2 HOP2 sing N N 238 DT "O5'" "C5'" sing N N 239 DT "C5'" "C4'" sing N N 240 DT "C5'" "H5'" sing N N 241 DT "C5'" "H5''" sing N N 242 DT "C4'" "O4'" sing N N 243 DT "C4'" "C3'" sing N N 244 DT "C4'" "H4'" sing N N 245 DT "O4'" "C1'" sing N N 246 DT "C3'" "O3'" sing N N 247 DT "C3'" "C2'" sing N N 248 DT "C3'" "H3'" sing N N 249 DT "O3'" "HO3'" sing N N 250 DT "C2'" "C1'" sing N N 251 DT "C2'" "H2'" sing N N 252 DT "C2'" "H2''" sing N N 253 DT "C1'" N1 sing N N 254 DT "C1'" "H1'" sing N N 255 DT N1 C2 sing N N 256 DT N1 C6 sing N N 257 DT C2 O2 doub N N 258 DT C2 N3 sing N N 259 DT N3 C4 sing N N 260 DT N3 H3 sing N N 261 DT C4 O4 doub N N 262 DT C4 C5 sing N N 263 DT C5 C7 sing N N 264 DT C5 C6 doub N N 265 DT C7 H71 sing N N 266 DT C7 H72 sing N N 267 DT C7 H73 sing N N 268 DT C6 H6 sing N N 269 GLN N CA sing N N 270 GLN N H sing N N 271 GLN N H2 sing N N 272 GLN CA C sing N N 273 GLN CA CB sing N N 274 GLN CA HA sing N N 275 GLN C O doub N N 276 GLN C OXT sing N N 277 GLN CB CG sing N N 278 GLN CB HB2 sing N N 279 GLN CB HB3 sing N N 280 GLN CG CD sing N N 281 GLN CG HG2 sing N N 282 GLN CG HG3 sing N N 283 GLN CD OE1 doub N N 284 GLN CD NE2 sing N N 285 GLN NE2 HE21 sing N N 286 GLN NE2 HE22 sing N N 287 GLN OXT HXT sing N N 288 GLU N CA sing N N 289 GLU N H sing N N 290 GLU N H2 sing N N 291 GLU CA C sing N N 292 GLU CA CB sing N N 293 GLU CA HA sing N N 294 GLU C O doub N N 295 GLU C OXT sing N N 296 GLU CB CG sing N N 297 GLU CB HB2 sing N N 298 GLU CB HB3 sing N N 299 GLU CG CD sing N N 300 GLU CG HG2 sing N N 301 GLU CG HG3 sing N N 302 GLU CD OE1 doub N N 303 GLU CD OE2 sing N N 304 GLU OE2 HE2 sing N N 305 GLU OXT HXT sing N N 306 GLY N CA sing N N 307 GLY N H sing N N 308 GLY N H2 sing N N 309 GLY CA C sing N N 310 GLY CA HA2 sing N N 311 GLY CA HA3 sing N N 312 GLY C O doub N N 313 GLY C OXT sing N N 314 GLY OXT HXT sing N N 315 HIS N CA sing N N 316 HIS N H sing N N 317 HIS N H2 sing N N 318 HIS CA C sing N N 319 HIS CA CB sing N N 320 HIS CA HA sing N N 321 HIS C O doub N N 322 HIS C OXT sing N N 323 HIS CB CG sing N N 324 HIS CB HB2 sing N N 325 HIS CB HB3 sing N N 326 HIS CG ND1 sing Y N 327 HIS CG CD2 doub Y N 328 HIS ND1 CE1 doub Y N 329 HIS ND1 HD1 sing N N 330 HIS CD2 NE2 sing Y N 331 HIS CD2 HD2 sing N N 332 HIS CE1 NE2 sing Y N 333 HIS CE1 HE1 sing N N 334 HIS NE2 HE2 sing N N 335 HIS OXT HXT sing N N 336 HOH O H1 sing N N 337 HOH O H2 sing N N 338 ILE N CA sing N N 339 ILE N H sing N N 340 ILE N H2 sing N N 341 ILE CA C sing N N 342 ILE CA CB sing N N 343 ILE CA HA sing N N 344 ILE C O doub N N 345 ILE C OXT sing N N 346 ILE CB CG1 sing N N 347 ILE CB CG2 sing N N 348 ILE CB HB sing N N 349 ILE CG1 CD1 sing N N 350 ILE CG1 HG12 sing N N 351 ILE CG1 HG13 sing N N 352 ILE CG2 HG21 sing N N 353 ILE CG2 HG22 sing N N 354 ILE CG2 HG23 sing N N 355 ILE CD1 HD11 sing N N 356 ILE CD1 HD12 sing N N 357 ILE CD1 HD13 sing N N 358 ILE OXT HXT sing N N 359 LEU N CA sing N N 360 LEU N H sing N N 361 LEU N H2 sing N N 362 LEU CA C sing N N 363 LEU CA CB sing N N 364 LEU CA HA sing N N 365 LEU C O doub N N 366 LEU C OXT sing N N 367 LEU CB CG sing N N 368 LEU CB HB2 sing N N 369 LEU CB HB3 sing N N 370 LEU CG CD1 sing N N 371 LEU CG CD2 sing N N 372 LEU CG HG sing N N 373 LEU CD1 HD11 sing N N 374 LEU CD1 HD12 sing N N 375 LEU CD1 HD13 sing N N 376 LEU CD2 HD21 sing N N 377 LEU CD2 HD22 sing N N 378 LEU CD2 HD23 sing N N 379 LEU OXT HXT sing N N 380 LYS N CA sing N N 381 LYS N H sing N N 382 LYS N H2 sing N N 383 LYS CA C sing N N 384 LYS CA CB sing N N 385 LYS CA HA sing N N 386 LYS C O doub N N 387 LYS C OXT sing N N 388 LYS CB CG sing N N 389 LYS CB HB2 sing N N 390 LYS CB HB3 sing N N 391 LYS CG CD sing N N 392 LYS CG HG2 sing N N 393 LYS CG HG3 sing N N 394 LYS CD CE sing N N 395 LYS CD HD2 sing N N 396 LYS CD HD3 sing N N 397 LYS CE NZ sing N N 398 LYS CE HE2 sing N N 399 LYS CE HE3 sing N N 400 LYS NZ HZ1 sing N N 401 LYS NZ HZ2 sing N N 402 LYS NZ HZ3 sing N N 403 LYS OXT HXT sing N N 404 MET N CA sing N N 405 MET N H sing N N 406 MET N H2 sing N N 407 MET CA C sing N N 408 MET CA CB sing N N 409 MET CA HA sing N N 410 MET C O doub N N 411 MET C OXT sing N N 412 MET CB CG sing N N 413 MET CB HB2 sing N N 414 MET CB HB3 sing N N 415 MET CG SD sing N N 416 MET CG HG2 sing N N 417 MET CG HG3 sing N N 418 MET SD CE sing N N 419 MET CE HE1 sing N N 420 MET CE HE2 sing N N 421 MET CE HE3 sing N N 422 MET OXT HXT sing N N 423 PHE N CA sing N N 424 PHE N H sing N N 425 PHE N H2 sing N N 426 PHE CA C sing N N 427 PHE CA CB sing N N 428 PHE CA HA sing N N 429 PHE C O doub N N 430 PHE C OXT sing N N 431 PHE CB CG sing N N 432 PHE CB HB2 sing N N 433 PHE CB HB3 sing N N 434 PHE CG CD1 doub Y N 435 PHE CG CD2 sing Y N 436 PHE CD1 CE1 sing Y N 437 PHE CD1 HD1 sing N N 438 PHE CD2 CE2 doub Y N 439 PHE CD2 HD2 sing N N 440 PHE CE1 CZ doub Y N 441 PHE CE1 HE1 sing N N 442 PHE CE2 CZ sing Y N 443 PHE CE2 HE2 sing N N 444 PHE CZ HZ sing N N 445 PHE OXT HXT sing N N 446 PRO N CA sing N N 447 PRO N CD sing N N 448 PRO N H sing N N 449 PRO CA C sing N N 450 PRO CA CB sing N N 451 PRO CA HA sing N N 452 PRO C O doub N N 453 PRO C OXT sing N N 454 PRO CB CG sing N N 455 PRO CB HB2 sing N N 456 PRO CB HB3 sing N N 457 PRO CG CD sing N N 458 PRO CG HG2 sing N N 459 PRO CG HG3 sing N N 460 PRO CD HD2 sing N N 461 PRO CD HD3 sing N N 462 PRO OXT HXT sing N N 463 SER N CA sing N N 464 SER N H sing N N 465 SER N H2 sing N N 466 SER CA C sing N N 467 SER CA CB sing N N 468 SER CA HA sing N N 469 SER C O doub N N 470 SER C OXT sing N N 471 SER CB OG sing N N 472 SER CB HB2 sing N N 473 SER CB HB3 sing N N 474 SER OG HG sing N N 475 SER OXT HXT sing N N 476 THR N CA sing N N 477 THR N H sing N N 478 THR N H2 sing N N 479 THR CA C sing N N 480 THR CA CB sing N N 481 THR CA HA sing N N 482 THR C O doub N N 483 THR C OXT sing N N 484 THR CB OG1 sing N N 485 THR CB CG2 sing N N 486 THR CB HB sing N N 487 THR OG1 HG1 sing N N 488 THR CG2 HG21 sing N N 489 THR CG2 HG22 sing N N 490 THR CG2 HG23 sing N N 491 THR OXT HXT sing N N 492 TRP N CA sing N N 493 TRP N H sing N N 494 TRP N H2 sing N N 495 TRP CA C sing N N 496 TRP CA CB sing N N 497 TRP CA HA sing N N 498 TRP C O doub N N 499 TRP C OXT sing N N 500 TRP CB CG sing N N 501 TRP CB HB2 sing N N 502 TRP CB HB3 sing N N 503 TRP CG CD1 doub Y N 504 TRP CG CD2 sing Y N 505 TRP CD1 NE1 sing Y N 506 TRP CD1 HD1 sing N N 507 TRP CD2 CE2 doub Y N 508 TRP CD2 CE3 sing Y N 509 TRP NE1 CE2 sing Y N 510 TRP NE1 HE1 sing N N 511 TRP CE2 CZ2 sing Y N 512 TRP CE3 CZ3 doub Y N 513 TRP CE3 HE3 sing N N 514 TRP CZ2 CH2 doub Y N 515 TRP CZ2 HZ2 sing N N 516 TRP CZ3 CH2 sing Y N 517 TRP CZ3 HZ3 sing N N 518 TRP CH2 HH2 sing N N 519 TRP OXT HXT sing N N 520 TYR N CA sing N N 521 TYR N H sing N N 522 TYR N H2 sing N N 523 TYR CA C sing N N 524 TYR CA CB sing N N 525 TYR CA HA sing N N 526 TYR C O doub N N 527 TYR C OXT sing N N 528 TYR CB CG sing N N 529 TYR CB HB2 sing N N 530 TYR CB HB3 sing N N 531 TYR CG CD1 doub Y N 532 TYR CG CD2 sing Y N 533 TYR CD1 CE1 sing Y N 534 TYR CD1 HD1 sing N N 535 TYR CD2 CE2 doub Y N 536 TYR CD2 HD2 sing N N 537 TYR CE1 CZ doub Y N 538 TYR CE1 HE1 sing N N 539 TYR CE2 CZ sing Y N 540 TYR CE2 HE2 sing N N 541 TYR CZ OH sing N N 542 TYR OH HH sing N N 543 TYR OXT HXT sing N N 544 VAL N CA sing N N 545 VAL N H sing N N 546 VAL N H2 sing N N 547 VAL CA C sing N N 548 VAL CA CB sing N N 549 VAL CA HA sing N N 550 VAL C O doub N N 551 VAL C OXT sing N N 552 VAL CB CG1 sing N N 553 VAL CB CG2 sing N N 554 VAL CB HB sing N N 555 VAL CG1 HG11 sing N N 556 VAL CG1 HG12 sing N N 557 VAL CG1 HG13 sing N N 558 VAL CG2 HG21 sing N N 559 VAL CG2 HG22 sing N N 560 VAL CG2 HG23 sing N N 561 VAL OXT HXT sing N N 562 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3SSD 'double helix' 3SSD 'b-form double helix' 3SSD 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 2 1_555 D DC 13 1_555 -1.113 -0.269 0.020 2.913 -15.168 -12.872 1 C_DG2:DC13_D C 2 ? D 13 ? ? 1 1 C DA 3 1_555 D DT 12 1_555 -0.740 -0.382 0.125 6.979 -0.371 -1.152 2 C_DA3:DT12_D C 3 ? D 12 ? 20 1 1 C DG 4 1_555 D DC 11 1_555 -1.173 -0.363 0.818 18.832 -8.500 4.074 3 C_DG4:DC11_D C 4 ? D 11 ? 19 1 1 C DA 5 1_555 D DT 10 1_555 -0.065 -0.046 -0.080 20.229 -18.803 -1.073 4 C_DA5:DT10_D C 5 ? D 10 ? 20 1 1 C DC 7 1_555 D DG 8 1_555 0.039 -0.423 0.498 -15.376 -1.030 -0.887 5 C_DC7:DG8_D C 7 ? D 8 ? 19 1 1 C DG 8 1_555 D DC 7 1_555 -0.283 -0.316 0.201 15.274 -3.814 1.144 6 C_DG8:DC7_D C 8 ? D 7 ? 19 1 1 C DT 10 1_555 D DA 5 1_555 0.015 -0.051 0.090 -21.964 -16.029 1.007 7 C_DT10:DA5_D C 10 ? D 5 ? 20 1 1 C DA 11 1_555 D DT 4 1_555 0.076 -0.153 -0.026 -16.324 -5.936 0.924 8 C_DA11:DT4_D C 11 ? D 4 ? 20 1 1 C DG 12 1_555 D DC 3 1_555 0.472 -0.014 0.169 -4.053 -12.512 5.618 9 C_DG12:DC3_D C 12 ? D 3 ? 19 1 1 C DC 13 1_555 D DG 2 1_555 1.610 -0.181 0.024 4.901 0.676 12.191 10 C_DC13:DG2_D C 13 ? D 2 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 2 1_555 D DC 13 1_555 C DA 3 1_555 D DT 12 1_555 0.629 0.159 3.304 -3.880 14.038 34.398 -1.637 -1.505 3.052 22.528 6.227 37.268 1 CC_DG2DA3:DT12DC13_DD C 2 ? D 13 ? C 3 ? D 12 ? 1 C DA 3 1_555 D DT 12 1_555 C DG 4 1_555 D DC 11 1_555 0.444 0.064 3.087 -4.952 -0.322 31.907 0.168 -1.620 2.985 -0.581 8.941 32.281 2 CC_DA3DG4:DC11DT12_DD C 3 ? D 12 ? C 4 ? D 11 ? 1 C DG 4 1_555 D DC 11 1_555 C DA 5 1_555 D DT 10 1_555 -0.746 -0.244 3.382 3.710 -0.928 39.162 -0.249 1.560 3.305 -1.381 -5.519 39.341 3 CC_DG4DA5:DT10DC11_DD C 4 ? D 11 ? C 5 ? D 10 ? 1 C DC 7 1_555 D DG 8 1_555 C DG 8 1_555 D DC 7 1_555 -0.020 0.585 2.551 3.525 17.083 30.062 -1.201 0.483 2.501 29.973 -6.184 34.654 4 CC_DC7DG8:DC7DG8_DD C 7 ? D 8 ? C 8 ? D 7 ? 1 C DT 10 1_555 D DA 5 1_555 C DA 11 1_555 D DT 4 1_555 0.531 -0.058 3.160 0.834 4.642 33.250 -0.837 -0.788 3.135 8.062 -1.449 33.574 5 CC_DT10DA11:DT4DA5_DD C 10 ? D 5 ? C 11 ? D 4 ? 1 C DA 11 1_555 D DT 4 1_555 C DG 12 1_555 D DC 3 1_555 -0.701 0.047 3.051 -0.528 4.100 34.689 -0.502 1.093 3.047 6.846 0.882 34.927 6 CC_DA11DG12:DC3DT4_DD C 11 ? D 4 ? C 12 ? D 3 ? 1 C DG 12 1_555 D DC 3 1_555 C DC 13 1_555 D DG 2 1_555 0.047 0.235 3.165 -0.538 5.059 34.596 -0.352 -0.158 3.166 8.450 0.898 34.956 7 CC_DG12DC13:DG2DC3_DD C 12 ? D 3 ? C 13 ? D 2 ? # _atom_sites.entry_id 3SSD _atom_sites.fract_transf_matrix[1][1] 0.027712 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014883 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007022 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_