HEADER HYDROLASE/INHIBITOR 11-JUL-11 3SU3 TITLE CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH VANIPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE, NS4A PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NS4A (UNP RESIDUES 1674-1688), NS3 (UNP RESIDUES 1027- COMPND 5 1208); COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 3 ORGANISM_TAXID: 31646; SOURCE 4 STRAIN: SUBTYPE 1A, BID-V318; SOURCE 5 GENE: NS3-NS4A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DRUG RESISTANCE, DRUG DESIGN, PROTEASE INHIBITORS, SERINE PROTEASE, KEYWDS 2 VIRAL PROTEIN, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.A.SCHIFFER,K.P.ROMANO REVDAT 4 28-FEB-24 3SU3 1 REMARK SEQADV HETSYN LINK REVDAT 3 08-NOV-17 3SU3 1 REMARK REVDAT 2 23-AUG-17 3SU3 1 SOURCE REMARK REVDAT 1 05-SEP-12 3SU3 0 JRNL AUTH K.P.ROMANO,A.ALI,C.AYDIN,D.SOUMANA,A.OZEN,L.M.DEVEAU, JRNL AUTH 2 C.SILVER,H.CAO,A.NEWTON,C.J.PETROPOULOS,W.HUANG,C.A.SCHIFFER JRNL TITL THE MOLECULAR BASIS OF DRUG RESISTANCE AGAINST HEPATITIS C JRNL TITL 2 VIRUS NS3/4A PROTEASE INHIBITORS. JRNL REF PLOS PATHOG. V. 8 02832 2012 JRNL REFN ISSN 1553-7366 JRNL PMID 22910833 JRNL DOI 10.1371/JOURNAL.PPAT.1002832 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 46084 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2344 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2708 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.24000 REMARK 3 B22 (A**2) : -0.61000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.049 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.339 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1584 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1051 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2171 ; 1.445 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2524 ; 0.811 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 207 ; 6.139 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;31.680 ;23.214 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 245 ;12.866 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.529 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 252 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1758 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 297 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1010 ; 0.621 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 419 ; 0.171 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1631 ; 1.129 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 574 ; 1.749 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 530 ; 2.718 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 982 A 987 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8677 -21.5612 -3.8830 REMARK 3 T TENSOR REMARK 3 T11: 0.1550 T22: 0.0520 REMARK 3 T33: 0.0579 T12: -0.0014 REMARK 3 T13: 0.0613 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 10.5527 L22: -0.3275 REMARK 3 L33: 15.3735 L12: 2.5546 REMARK 3 L13: -3.6978 L23: 6.0154 REMARK 3 S TENSOR REMARK 3 S11: 0.2691 S12: -0.1366 S13: -0.2441 REMARK 3 S21: -0.0559 S22: -0.0594 S23: -0.0526 REMARK 3 S31: -0.5109 S32: -0.0888 S33: -0.2098 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 988 A 997 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2261 -7.4669 13.5543 REMARK 3 T TENSOR REMARK 3 T11: 0.0611 T22: 0.0698 REMARK 3 T33: 0.0629 T12: 0.0016 REMARK 3 T13: 0.0106 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.5820 L22: 4.3518 REMARK 3 L33: 2.7668 L12: 0.0279 REMARK 3 L13: -1.1985 L23: 1.5255 REMARK 3 S TENSOR REMARK 3 S11: -0.0740 S12: 0.0475 S13: -0.0072 REMARK 3 S21: -0.1969 S22: 0.1046 S23: -0.1863 REMARK 3 S31: 0.0288 S32: 0.1201 S33: -0.0307 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 998 A 1014 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4662 5.4196 22.3645 REMARK 3 T TENSOR REMARK 3 T11: 0.0645 T22: 0.0402 REMARK 3 T33: 0.0515 T12: -0.0066 REMARK 3 T13: -0.0067 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 3.1325 L22: 2.9367 REMARK 3 L33: 4.7056 L12: -0.5496 REMARK 3 L13: -2.8443 L23: 0.1035 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: -0.1801 S13: 0.0990 REMARK 3 S21: 0.1462 S22: 0.0549 S23: -0.0171 REMARK 3 S31: -0.0215 S32: 0.1231 S33: -0.0549 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1015 A 1027 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7934 -5.8851 11.5546 REMARK 3 T TENSOR REMARK 3 T11: 0.0890 T22: 0.0191 REMARK 3 T33: 0.0813 T12: -0.0234 REMARK 3 T13: 0.0982 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 3.3152 L22: 6.4243 REMARK 3 L33: 6.1714 L12: -1.0640 REMARK 3 L13: 0.2399 L23: 1.2617 REMARK 3 S TENSOR REMARK 3 S11: -0.0661 S12: 0.0972 S13: 0.0858 REMARK 3 S21: -0.5199 S22: 0.1105 S23: -0.6181 REMARK 3 S31: -0.2452 S32: 0.3887 S33: -0.0444 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1028 A 1033 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7435 -1.4816 26.2764 REMARK 3 T TENSOR REMARK 3 T11: 0.0708 T22: 0.0360 REMARK 3 T33: 0.0743 T12: -0.0189 REMARK 3 T13: -0.0125 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 17.6270 L22: 3.3992 REMARK 3 L33: 4.7026 L12: 2.4143 REMARK 3 L13: -3.7906 L23: -1.0922 REMARK 3 S TENSOR REMARK 3 S11: 0.0741 S12: -0.3299 S13: 0.3471 REMARK 3 S21: 0.1246 S22: -0.0811 S23: -0.1944 REMARK 3 S31: -0.1518 S32: 0.2797 S33: 0.0070 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1034 A 1041 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1279 -5.1728 12.9615 REMARK 3 T TENSOR REMARK 3 T11: 0.0508 T22: 0.0739 REMARK 3 T33: 0.0529 T12: 0.0095 REMARK 3 T13: 0.0016 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.3974 L22: 3.1182 REMARK 3 L33: 11.0535 L12: 1.1515 REMARK 3 L13: 1.2634 L23: 2.4902 REMARK 3 S TENSOR REMARK 3 S11: 0.0880 S12: 0.1700 S13: -0.0059 REMARK 3 S21: -0.1229 S22: 0.0291 S23: -0.0968 REMARK 3 S31: 0.2052 S32: -0.0008 S33: -0.1171 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1042 A 1048 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8723 -6.4324 21.1910 REMARK 3 T TENSOR REMARK 3 T11: 0.0522 T22: 0.0464 REMARK 3 T33: 0.0510 T12: -0.0082 REMARK 3 T13: 0.0008 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.8320 L22: 1.0559 REMARK 3 L33: 5.2194 L12: -1.1621 REMARK 3 L13: 1.2232 L23: -1.8240 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: 0.0459 S13: 0.0368 REMARK 3 S21: 0.0396 S22: 0.0058 S23: -0.0285 REMARK 3 S31: -0.0148 S32: -0.0103 S33: -0.0079 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1049 A 1061 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1623 -13.7433 20.2806 REMARK 3 T TENSOR REMARK 3 T11: 0.0553 T22: 0.0490 REMARK 3 T33: 0.0531 T12: 0.0065 REMARK 3 T13: 0.0026 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.1203 L22: 1.0721 REMARK 3 L33: 0.6473 L12: -0.0809 REMARK 3 L13: 0.2138 L23: 0.2969 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: -0.0102 S13: -0.0496 REMARK 3 S21: 0.0551 S22: -0.0057 S23: -0.0414 REMARK 3 S31: 0.0677 S32: -0.0121 S33: 0.0078 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1062 A 1074 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8726 -14.5391 17.2060 REMARK 3 T TENSOR REMARK 3 T11: 0.0370 T22: 0.0643 REMARK 3 T33: 0.0733 T12: 0.0173 REMARK 3 T13: 0.0082 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.2242 L22: 1.9864 REMARK 3 L33: 1.0084 L12: 0.6401 REMARK 3 L13: -0.1679 L23: -0.3724 REMARK 3 S TENSOR REMARK 3 S11: 0.0723 S12: -0.0630 S13: 0.0104 REMARK 3 S21: -0.0101 S22: -0.0456 S23: -0.1758 REMARK 3 S31: 0.0539 S32: 0.1251 S33: -0.0267 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1075 A 1085 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1780 -18.4537 20.6128 REMARK 3 T TENSOR REMARK 3 T11: 0.0600 T22: 0.0532 REMARK 3 T33: 0.0620 T12: 0.0048 REMARK 3 T13: -0.0007 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.1297 L22: 0.4590 REMARK 3 L33: 0.3063 L12: 0.3491 REMARK 3 L13: -0.1480 L23: 0.4872 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.0146 S13: -0.0794 REMARK 3 S21: 0.1032 S22: -0.0245 S23: -0.0097 REMARK 3 S31: 0.0778 S32: -0.0201 S33: -0.0025 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1086 A 1094 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8485 -8.4999 28.4025 REMARK 3 T TENSOR REMARK 3 T11: 0.0592 T22: 0.0598 REMARK 3 T33: 0.0513 T12: -0.0042 REMARK 3 T13: -0.0258 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 4.6577 L22: 4.3243 REMARK 3 L33: 2.9166 L12: -0.5562 REMARK 3 L13: -0.7779 L23: 2.3711 REMARK 3 S TENSOR REMARK 3 S11: 0.1321 S12: -0.0184 S13: 0.1455 REMARK 3 S21: 0.0006 S22: 0.0389 S23: -0.3400 REMARK 3 S31: -0.0702 S32: 0.1232 S33: -0.1710 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1095 A 1101 REMARK 3 ORIGIN FOR THE GROUP (A): -9.2102 -9.3029 38.8782 REMARK 3 T TENSOR REMARK 3 T11: 0.0415 T22: 0.1049 REMARK 3 T33: 0.0594 T12: 0.0047 REMARK 3 T13: 0.0155 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 11.0617 L22: 1.3901 REMARK 3 L33: 6.4816 L12: -2.8474 REMARK 3 L13: -3.9615 L23: 1.4709 REMARK 3 S TENSOR REMARK 3 S11: -0.1415 S12: -0.1260 S13: -0.1097 REMARK 3 S21: 0.0884 S22: -0.1364 S23: 0.1117 REMARK 3 S31: 0.0723 S32: 0.0846 S33: 0.2779 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1102 A 1114 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0817 1.3662 26.3730 REMARK 3 T TENSOR REMARK 3 T11: 0.0629 T22: 0.0430 REMARK 3 T33: 0.0895 T12: 0.0027 REMARK 3 T13: 0.0222 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.6876 L22: 0.7486 REMARK 3 L33: 5.7157 L12: 1.7459 REMARK 3 L13: -3.6664 L23: -2.2308 REMARK 3 S TENSOR REMARK 3 S11: 0.1065 S12: -0.1080 S13: 0.2085 REMARK 3 S21: 0.0166 S22: -0.0175 S23: 0.1072 REMARK 3 S31: -0.1146 S32: 0.0708 S33: -0.0890 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1115 A 1122 REMARK 3 ORIGIN FOR THE GROUP (A): -19.4769 -7.7309 30.5642 REMARK 3 T TENSOR REMARK 3 T11: 0.0260 T22: 0.0685 REMARK 3 T33: 0.0562 T12: -0.0034 REMARK 3 T13: 0.0142 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.2106 L22: 3.0210 REMARK 3 L33: 0.9563 L12: 0.0056 REMARK 3 L13: -1.2617 L23: -0.9487 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: -0.0495 S13: 0.0165 REMARK 3 S21: -0.0113 S22: 0.0231 S23: -0.0072 REMARK 3 S31: -0.0092 S32: 0.0209 S33: -0.0245 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1123 A 1129 REMARK 3 ORIGIN FOR THE GROUP (A): -21.2790 -1.5637 25.4825 REMARK 3 T TENSOR REMARK 3 T11: 0.0711 T22: 0.0788 REMARK 3 T33: 0.0615 T12: 0.0144 REMARK 3 T13: 0.0374 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 2.0802 L22: 4.7109 REMARK 3 L33: 1.8249 L12: 0.5744 REMARK 3 L13: -0.7774 L23: -2.0912 REMARK 3 S TENSOR REMARK 3 S11: 0.1303 S12: 0.0442 S13: 0.1891 REMARK 3 S21: 0.1133 S22: 0.0204 S23: 0.2061 REMARK 3 S31: -0.1848 S32: -0.1226 S33: -0.1507 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1130 A 1135 REMARK 3 ORIGIN FOR THE GROUP (A): -16.1997 2.6495 16.8256 REMARK 3 T TENSOR REMARK 3 T11: 0.1142 T22: 0.1286 REMARK 3 T33: 0.0924 T12: 0.0469 REMARK 3 T13: 0.0365 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 12.8387 L22: 3.8125 REMARK 3 L33: 5.5397 L12: -4.7455 REMARK 3 L13: 2.2783 L23: -3.3892 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: -0.3082 S13: 0.3660 REMARK 3 S21: 0.3879 S22: 0.3695 S23: -0.0459 REMARK 3 S31: -0.2081 S32: -0.4207 S33: -0.2577 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1136 A 1144 REMARK 3 ORIGIN FOR THE GROUP (A): -8.7609 -3.9579 22.4136 REMARK 3 T TENSOR REMARK 3 T11: 0.0547 T22: 0.0719 REMARK 3 T33: 0.0727 T12: -0.0044 REMARK 3 T13: 0.0055 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.2385 L22: 0.1717 REMARK 3 L33: 2.7758 L12: -0.1139 REMARK 3 L13: -0.3232 L23: -0.2316 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: -0.0525 S13: 0.0807 REMARK 3 S21: 0.0234 S22: 0.0191 S23: 0.1018 REMARK 3 S31: -0.0895 S32: -0.0751 S33: -0.0457 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1145 A 1158 REMARK 3 ORIGIN FOR THE GROUP (A): -11.3126 -6.7823 28.3715 REMARK 3 T TENSOR REMARK 3 T11: 0.0476 T22: 0.0542 REMARK 3 T33: 0.0483 T12: -0.0063 REMARK 3 T13: 0.0164 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.0973 L22: 0.3171 REMARK 3 L33: 1.1447 L12: -0.3022 REMARK 3 L13: -0.6467 L23: 0.3581 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.0734 S13: 0.0811 REMARK 3 S21: 0.0017 S22: 0.0004 S23: 0.0206 REMARK 3 S31: -0.0174 S32: 0.0668 S33: -0.0007 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1159 A 1172 REMARK 3 ORIGIN FOR THE GROUP (A): -18.2749 -6.9475 21.6198 REMARK 3 T TENSOR REMARK 3 T11: 0.0499 T22: 0.0653 REMARK 3 T33: 0.0555 T12: -0.0063 REMARK 3 T13: 0.0195 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 3.3531 L22: 2.8555 REMARK 3 L33: 3.1889 L12: -1.4777 REMARK 3 L13: 1.3498 L23: -2.5797 REMARK 3 S TENSOR REMARK 3 S11: 0.0120 S12: 0.0457 S13: 0.0457 REMARK 3 S21: 0.0129 S22: 0.1455 S23: 0.1684 REMARK 3 S31: -0.0364 S32: -0.2079 S33: -0.1574 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1173 A 1179 REMARK 3 ORIGIN FOR THE GROUP (A): -6.2104 -18.8812 30.8942 REMARK 3 T TENSOR REMARK 3 T11: 0.1720 T22: 0.0697 REMARK 3 T33: 0.0771 T12: 0.0489 REMARK 3 T13: 0.0279 T23: 0.0543 REMARK 3 L TENSOR REMARK 3 L11: 16.9072 L22: 2.5299 REMARK 3 L33: 6.0826 L12: 0.1198 REMARK 3 L13: -9.9109 L23: -0.1792 REMARK 3 S TENSOR REMARK 3 S11: -0.6773 S12: -0.8013 S13: -0.7356 REMARK 3 S21: -0.1221 S22: 0.0999 S23: 0.1209 REMARK 3 S31: 0.5142 S32: 0.2473 S33: 0.5774 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3SU3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000066652. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46251 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.32900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG 3350, 0.1M MES (PH 6.5), 4% REMARK 280 AMMONIUM SULFATE, HANGING DROP, VAPOR DIFFUSION, TEMPERATURE REMARK 280 295K, PH 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.54750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.12500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.23050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.12500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.54750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.23050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1181 REMARK 465 PRO A 1182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1092 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1165 CG CD CE NZ REMARK 470 ARG A1180 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 1101 O HOH A 153 1.33 REMARK 500 O HOH A 189 O HOH A 190 2.00 REMARK 500 O HOH A 188 O HOH A 189 2.08 REMARK 500 O HOH A 73 O HOH A 160 2.13 REMARK 500 O HOH A 206 O HOH A 207 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A1043 -164.59 -162.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 VANIPREVIR (MK-7009) IS A MACROCYCLIC, PEPTIDOMIMETIC HCV NS3/4A REMARK 600 PROTEASE INHIBITOR FROM MERCK. THE DRUG MIMICS THE PEPTIDE BACKBONE REMARK 600 OF PROTEINS, ALTHOUGH THE DRUG MOIETIES CANNOT BE SEQUENCED USING REMARK 600 AMINO ACID NOMENCLATURE. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 4 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 108.2 REMARK 620 3 CYS A1145 SG 110.1 118.6 REMARK 620 4 HIS A1149 ND1 123.6 99.8 96.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SU3 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SU4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SU5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SU6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SUD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH MK-5172 REMARK 900 RELATED ID: 3SUE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SUF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SUG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SV6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH TELAPREVIR REMARK 900 RELATED ID: 3SV7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 900 RELATED ID: 3SV8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 900 RELATED ID: 3SV9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE COFACTOR 4A RESIDUES 990-1000 (GLY SER VAL VAL ILE VAL GLY ARG REMARK 999 ILE ASN LEU) IN THIS ENTRY CORRESPOND TO RESIDUES NUMBERING 1678- REMARK 999 1688 OF DATABASE SEQUENCE REFERENCE (UNP A8DG50). THIS PEPTIDE IS REMARK 999 COVALENTLY LINKED TO THE N-TERMINUS OF NS3. C1679S MUTATION WAS REMARK 999 ENGINEERED TO PREVENT DISULFIDE FORMATION. THE V1686I AND I1687N REMARK 999 WERE ENGINEERED TO OPTIMIZE THE LINKER BETWEEN THE COFACTOR 4A AND REMARK 999 NS3. DBREF 3SU3 A 986 1000 UNP A8DG50 A8DG50_9HEPC 1674 1688 DBREF 3SU3 A 1001 1182 UNP A8DG50 A8DG50_9HEPC 1027 1208 SEQADV 3SU3 GLY A 980 UNP A8DG50 EXPRESSION TAG SEQADV 3SU3 SER A 981 UNP A8DG50 EXPRESSION TAG SEQADV 3SU3 HIS A 982 UNP A8DG50 EXPRESSION TAG SEQADV 3SU3 MET A 983 UNP A8DG50 EXPRESSION TAG SEQADV 3SU3 ALA A 984 UNP A8DG50 EXPRESSION TAG SEQADV 3SU3 SER A 985 UNP A8DG50 EXPRESSION TAG SEQADV 3SU3 MET A 986 UNP A8DG50 CYS 1674 ENGINEERED MUTATION SEQADV 3SU3 LYS A 987 UNP A8DG50 LEU 1675 ENGINEERED MUTATION SEQADV 3SU3 LYS A 988 UNP A8DG50 SER 1676 ENGINEERED MUTATION SEQADV 3SU3 LYS A 989 UNP A8DG50 THR 1677 ENGINEERED MUTATION SEQADV 3SU3 SER A 991 UNP A8DG50 CYS 1679 SEE REMARK 999 SEQADV 3SU3 ILE A 998 UNP A8DG50 VAL 1686 SEE REMARK 999 SEQADV 3SU3 ASN A 999 UNP A8DG50 ILE 1687 SEE REMARK 999 SEQADV 3SU3 SER A 1001 UNP A8DG50 ALA 1027 ENGINEERED MUTATION SEQADV 3SU3 GLY A 1002 UNP A8DG50 PRO 1028 ENGINEERED MUTATION SEQADV 3SU3 ASP A 1003 UNP A8DG50 ILE 1029 ENGINEERED MUTATION SEQADV 3SU3 GLU A 1013 UNP A8DG50 LEU 1039 ENGINEERED MUTATION SEQADV 3SU3 GLU A 1014 UNP A8DG50 LEU 1040 ENGINEERED MUTATION SEQADV 3SU3 GLN A 1017 UNP A8DG50 ILE 1043 ENGINEERED MUTATION SEQADV 3SU3 GLU A 1018 UNP A8DG50 ILE 1044 ENGINEERED MUTATION SEQADV 3SU3 GLN A 1021 UNP A8DG50 LEU 1047 ENGINEERED MUTATION SEQADV 3SU3 THR A 1040 UNP A8DG50 ALA 1066 ENGINEERED MUTATION SEQADV 3SU3 SER A 1047 UNP A8DG50 CYS 1073 ENGINEERED MUTATION SEQADV 3SU3 LEU A 1052 UNP A8DG50 CYS 1078 ENGINEERED MUTATION SEQADV 3SU3 THR A 1072 UNP A8DG50 ILE 1098 ENGINEERED MUTATION SEQADV 3SU3 GLN A 1086 UNP A8DG50 PRO 1112 ENGINEERED MUTATION SEQADV 3SU3 ALA A 1139 UNP A8DG50 SER 1165 ENGINEERED MUTATION SEQADV 3SU3 SER A 1159 UNP A8DG50 CYS 1185 ENGINEERED MUTATION SEQRES 1 A 203 GLY SER HIS MET ALA SER MET LYS LYS LYS GLY SER VAL SEQRES 2 A 203 VAL ILE VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA SEQRES 3 A 203 TYR ALA GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU SEQRES 4 A 203 THR SER GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY SEQRES 5 A 203 GLU VAL GLN ILE VAL SER THR ALA THR GLN THR PHE LEU SEQRES 6 A 203 ALA THR SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS SEQRES 7 A 203 GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO SEQRES 8 A 203 VAL THR GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL SEQRES 9 A 203 GLY TRP GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO SEQRES 10 A 203 CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 203 HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER SEQRES 12 A 203 ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER TYR LEU SEQRES 13 A 203 LYS GLY SER ALA GLY GLY PRO LEU LEU CYS PRO ALA GLY SEQRES 14 A 203 HIS ALA VAL GLY ILE PHE ARG ALA ALA VAL SER THR ARG SEQRES 15 A 203 GLY VAL ALA LYS ALA VAL ASP PHE ILE PRO VAL GLU SER SEQRES 16 A 203 LEU GLU THR THR MET ARG SER PRO HET SU3 A 1 53 HET SO4 A 2 5 HET SO4 A 3 5 HET ZN A 4 1 HETNAM SU3 (5R,7S,10S)-10-TERT-BUTYL-N-{(1R,2R)-1- HETNAM 2 SU3 [(CYCLOPROPYLSULFONYL)CARBAMOYL]-2-ETHYLCYCLOPROPYL}- HETNAM 3 SU3 15,15-DIMETHYL-3,9,12-TRIOXO-6,7,9,10,11,12,14,15,16, HETNAM 4 SU3 17,18,19-DODECAHYDRO-1H,5H-2,23:5,8-DIMETHANO-4,13,2, HETNAM 5 SU3 8,11-BENZODIOXATRIAZACYCLOHENICOSINE-7(3H)-CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETSYN SU3 VANIPREVIR; MK-7009 FORMUL 2 SU3 C38 H55 N5 O9 S FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 ZN ZN 2+ FORMUL 6 HOH *212(H2 O) HELIX 1 1 HIS A 982 MET A 986 5 5 HELIX 2 2 GLY A 1012 GLY A 1023 1 12 HELIX 3 3 TYR A 1056 GLY A 1060 1 5 HELIX 4 4 SER A 1133 LEU A 1135 5 3 HELIX 5 5 VAL A 1172 MET A 1179 1 8 SHEET 1 A 7 TYR A1006 GLN A1009 0 SHEET 2 A 7 VAL A 993 ASN A 999 -1 N ASN A 999 O TYR A1006 SHEET 3 A 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 A 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 A 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 A 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 A 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 B 7 ASP A1103 VAL A1107 0 SHEET 2 B 7 VAL A1113 ARG A1118 -1 O VAL A1116 N LEU A1104 SHEET 3 B 7 ARG A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 B 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 B 7 ALA A1150 THR A1160 -1 N ALA A1156 O ASP A1168 SHEET 6 B 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 B 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK ZN ZN A 4 SG CYS A1097 1555 1555 2.36 LINK ZN ZN A 4 SG CYS A1099 1555 1555 2.26 LINK ZN ZN A 4 SG CYS A1145 1555 1555 2.34 LINK ZN ZN A 4 ND1 HIS A1149 1555 1555 2.26 SITE 1 AC1 23 HOH A 29 HOH A 47 HOH A 178 HOH A 212 SITE 2 AC1 23 HOH A 213 HOH A 215 HOH A 220 HIS A 982 SITE 3 AC1 23 GLN A1041 PHE A1043 HIS A1057 GLY A1058 SITE 4 AC1 23 ASP A1079 ASP A1081 LEU A1135 LYS A1136 SITE 5 AC1 23 GLY A1137 SER A1138 ALA A1139 PHE A1154 SITE 6 AC1 23 ARG A1155 ALA A1156 ALA A1157 SITE 1 AC2 8 HOH A 20 HOH A 30 HOH A 31 HOH A 102 SITE 2 AC2 8 HOH A 149 TYR A1006 GLN A1008 TYR A1056 SITE 1 AC3 7 HOH A 58 HOH A 61 HOH A 65 HOH A 91 SITE 2 AC3 7 HOH A 146 ARG A1109 HIS A1110 SITE 1 AC4 4 CYS A1097 CYS A1099 CYS A1145 HIS A1149 CRYST1 55.095 58.461 60.250 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018150 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017105 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016598 0.00000