HEADER HYDROLASE ACTIVATOR 11-JUL-11 3SUB TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF PLASMODIUM FALCIPARUM ARF TITLE 2 GTPASE ACTIVATING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-160; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 GENE: PFL2140C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCR2.1 KEYWDS GTPASE-ACTIVATING PROTEIN, PROTEIN TRAFFICKING, HYDROLASE ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR W.J.COOK,D.CHATTOPADHYAY REVDAT 3 28-FEB-24 3SUB 1 REMARK SEQADV LINK REVDAT 2 28-MAR-12 3SUB 1 JRNL REVDAT 1 09-NOV-11 3SUB 0 JRNL AUTH W.J.COOK,O.SENKOVICH,D.CHATTOPADHYAY JRNL TITL STRUCTURE OF THE CATALYTIC DOMAIN OF PLASMODIUM FALCIPARUM JRNL TITL 2 ARF GTPASE-ACTIVATING PROTEIN (ARFGAP). JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 67 1339 2011 JRNL REFN ESSN 1744-3091 JRNL PMID 22102228 JRNL DOI 10.1107/S1744309111032507 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 947 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1320 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2134 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.46000 REMARK 3 B22 (A**2) : 1.46000 REMARK 3 B33 (A**2) : -2.19000 REMARK 3 B12 (A**2) : 0.73000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.195 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.654 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2223 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3011 ; 0.900 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 278 ; 4.497 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;27.782 ;24.206 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 393 ;13.314 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.235 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 326 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1690 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1358 ; 0.213 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2204 ; 0.426 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 865 ; 0.684 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 802 ; 1.235 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 136 REMARK 3 RESIDUE RANGE : A 161 A 163 REMARK 3 RESIDUE RANGE : A 215 A 333 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2892 59.0530 35.3822 REMARK 3 T TENSOR REMARK 3 T11: 0.0947 T22: 0.0266 REMARK 3 T33: 0.0622 T12: 0.0282 REMARK 3 T13: 0.0074 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.1139 L22: 0.6975 REMARK 3 L33: 2.6508 L12: -0.4707 REMARK 3 L13: 0.0672 L23: 0.0564 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.0618 S13: -0.0893 REMARK 3 S21: 0.0667 S22: 0.1101 S23: -0.0296 REMARK 3 S31: 0.0546 S32: -0.0388 S33: -0.1224 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 135 REMARK 3 RESIDUE RANGE : B 161 B 161 REMARK 3 RESIDUE RANGE : B 201 B 331 REMARK 3 ORIGIN FOR THE GROUP (A): 28.4433 52.0999 22.0383 REMARK 3 T TENSOR REMARK 3 T11: 0.0748 T22: 0.0889 REMARK 3 T33: 0.0993 T12: 0.0230 REMARK 3 T13: 0.0365 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 4.7464 L22: 2.4764 REMARK 3 L33: 4.3832 L12: -2.1140 REMARK 3 L13: -0.2591 L23: 0.5124 REMARK 3 S TENSOR REMARK 3 S11: 0.1345 S12: 0.1933 S13: 0.3951 REMARK 3 S21: -0.1937 S22: -0.0060 S23: -0.3337 REMARK 3 S31: -0.1837 S32: 0.3956 S33: -0.1285 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3SUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066660. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.26966, 1.2828, 1.2834 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19650 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.23000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4 MM ZINC CHLORIDE, 1.4 M LITHIUM REMARK 280 SULFATE, 0.1 M HEPES, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.86667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.93333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.93333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.86667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 137 REMARK 465 GLY A 138 REMARK 465 ARG A 139 REMARK 465 ASN A 140 REMARK 465 GLU A 141 REMARK 465 ASN A 142 REMARK 465 VAL A 143 REMARK 465 ASN A 144 REMARK 465 GLU A 145 REMARK 465 ASN A 146 REMARK 465 ASN A 147 REMARK 465 LYS A 148 REMARK 465 ASN A 149 REMARK 465 GLN A 150 REMARK 465 TYR A 151 REMARK 465 SER A 152 REMARK 465 ASN A 153 REMARK 465 GLU A 154 REMARK 465 GLU A 155 REMARK 465 PRO A 156 REMARK 465 ASP A 157 REMARK 465 PHE A 158 REMARK 465 ILE A 159 REMARK 465 SER A 160 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ASN B 136 REMARK 465 TYR B 137 REMARK 465 GLY B 138 REMARK 465 ARG B 139 REMARK 465 ASN B 140 REMARK 465 GLU B 141 REMARK 465 ASN B 142 REMARK 465 VAL B 143 REMARK 465 ASN B 144 REMARK 465 GLU B 145 REMARK 465 ASN B 146 REMARK 465 ASN B 147 REMARK 465 LYS B 148 REMARK 465 ASN B 149 REMARK 465 GLN B 150 REMARK 465 TYR B 151 REMARK 465 SER B 152 REMARK 465 ASN B 153 REMARK 465 GLU B 154 REMARK 465 GLU B 155 REMARK 465 PRO B 156 REMARK 465 ASP B 157 REMARK 465 PHE B 158 REMARK 465 ILE B 159 REMARK 465 SER B 160 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 GLU B 17 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 29 74.83 59.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 161 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 22 SG REMARK 620 2 CYS A 25 SG 109.1 REMARK 620 3 CYS A 42 SG 113.1 109.5 REMARK 620 4 CYS A 45 SG 103.8 117.0 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 161 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 22 SG REMARK 620 2 CYS B 25 SG 110.3 REMARK 620 3 CYS B 42 SG 108.8 117.3 REMARK 620 4 CYS B 45 SG 102.7 110.1 106.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 161 DBREF 3SUB A 1 157 UNP Q8I4Y5 Q8I4Y5_PLAF7 1 157 DBREF 3SUB B 1 157 UNP Q8I4Y5 Q8I4Y5_PLAF7 1 157 SEQADV 3SUB GLY A -2 UNP Q8I4Y5 EXPRESSION TAG SEQADV 3SUB SER A -1 UNP Q8I4Y5 EXPRESSION TAG SEQADV 3SUB HIS A 0 UNP Q8I4Y5 EXPRESSION TAG SEQADV 3SUB PHE A 8 UNP Q8I4Y5 LEU 8 CONFLICT SEQADV 3SUB GLY B -2 UNP Q8I4Y5 EXPRESSION TAG SEQADV 3SUB SER B -1 UNP Q8I4Y5 EXPRESSION TAG SEQADV 3SUB HIS B 0 UNP Q8I4Y5 EXPRESSION TAG SEQADV 3SUB PHE B 8 UNP Q8I4Y5 LEU 8 CONFLICT SEQRES 1 A 163 GLY SER HIS MET ASN ALA ALA ALA VAL GLU PHE ILE ASN SEQRES 2 A 163 ARG LEU LYS LYS GLU ASP GLU SER ASN ASN LYS CYS PHE SEQRES 3 A 163 ASP CYS GLY ILE SER ASN PRO ASP TRP VAL SER VAL ASN SEQRES 4 A 163 HIS GLY ILE PHE LEU CYS ILE ASN CYS SER GLY VAL HIS SEQRES 5 A 163 ARG SER LEU GLY VAL HIS ILE SER ILE VAL ARG SER ILE SEQRES 6 A 163 LYS MET ASP ILE PHE THR ASP GLU GLN LEU LYS TYR ILE SEQRES 7 A 163 ASP LYS GLY GLY ASN LYS LYS CYS GLN THR TYR LEU GLU SEQRES 8 A 163 ASN TYR GLY ILE SER ASP PHE ILE PRO GLU ARG LYS TYR SEQRES 9 A 163 ARG THR LYS ALA ALA ASP HIS TYR ARG LYS ILE LEU ARG SEQRES 10 A 163 SER ILE VAL HIS ASN VAL ASP PRO PRO ALA PRO LEU PRO SEQRES 11 A 163 LEU ASP GLU GLY LYS SER LEU ILE ASN TYR GLY ARG ASN SEQRES 12 A 163 GLU ASN VAL ASN GLU ASN ASN LYS ASN GLN TYR SER ASN SEQRES 13 A 163 GLU GLU PRO ASP PHE ILE SER SEQRES 1 B 163 GLY SER HIS MET ASN ALA ALA ALA VAL GLU PHE ILE ASN SEQRES 2 B 163 ARG LEU LYS LYS GLU ASP GLU SER ASN ASN LYS CYS PHE SEQRES 3 B 163 ASP CYS GLY ILE SER ASN PRO ASP TRP VAL SER VAL ASN SEQRES 4 B 163 HIS GLY ILE PHE LEU CYS ILE ASN CYS SER GLY VAL HIS SEQRES 5 B 163 ARG SER LEU GLY VAL HIS ILE SER ILE VAL ARG SER ILE SEQRES 6 B 163 LYS MET ASP ILE PHE THR ASP GLU GLN LEU LYS TYR ILE SEQRES 7 B 163 ASP LYS GLY GLY ASN LYS LYS CYS GLN THR TYR LEU GLU SEQRES 8 B 163 ASN TYR GLY ILE SER ASP PHE ILE PRO GLU ARG LYS TYR SEQRES 9 B 163 ARG THR LYS ALA ALA ASP HIS TYR ARG LYS ILE LEU ARG SEQRES 10 B 163 SER ILE VAL HIS ASN VAL ASP PRO PRO ALA PRO LEU PRO SEQRES 11 B 163 LEU ASP GLU GLY LYS SER LEU ILE ASN TYR GLY ARG ASN SEQRES 12 B 163 GLU ASN VAL ASN GLU ASN ASN LYS ASN GLN TYR SER ASN SEQRES 13 B 163 GLU GLU PRO ASP PHE ILE SER HET ZN A 161 1 HET SO4 A 162 5 HET SO4 A 163 5 HET ZN B 161 1 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *123(H2 O) HELIX 1 1 GLY A -2 ASP A 16 1 19 HELIX 2 2 GLU A 17 LYS A 21 5 5 HELIX 3 3 CYS A 42 LEU A 52 1 11 HELIX 4 4 THR A 68 GLY A 78 1 11 HELIX 5 5 GLY A 79 TYR A 90 1 12 HELIX 6 6 ILE A 96 TYR A 101 1 6 HELIX 7 7 THR A 103 HIS A 118 1 16 HELIX 8 8 PRO A 127 GLY A 131 5 5 HELIX 9 9 ALA B 5 ASP B 16 1 12 HELIX 10 10 GLU B 17 LYS B 21 5 5 HELIX 11 11 CYS B 42 GLY B 53 1 12 HELIX 12 12 THR B 68 LYS B 77 1 10 HELIX 13 13 GLY B 79 TYR B 90 1 12 HELIX 14 14 ILE B 96 TYR B 101 1 6 HELIX 15 15 THR B 103 HIS B 118 1 16 HELIX 16 16 PRO B 127 GLY B 131 5 5 SHEET 1 A 3 ILE A 39 LEU A 41 0 SHEET 2 A 3 TRP A 32 SER A 34 -1 N TRP A 32 O LEU A 41 SHEET 3 A 3 VAL A 59 SER A 61 -1 O ARG A 60 N VAL A 33 SHEET 1 B 3 ILE B 39 LEU B 41 0 SHEET 2 B 3 TRP B 32 SER B 34 -1 N TRP B 32 O LEU B 41 SHEET 3 B 3 VAL B 59 SER B 61 -1 O ARG B 60 N VAL B 33 LINK SG CYS A 22 ZN ZN A 161 1555 1555 2.36 LINK SG CYS A 25 ZN ZN A 161 1555 1555 2.27 LINK SG CYS A 42 ZN ZN A 161 1555 1555 2.32 LINK SG CYS A 45 ZN ZN A 161 1555 1555 2.26 LINK SG CYS B 22 ZN ZN B 161 1555 1555 2.41 LINK SG CYS B 25 ZN ZN B 161 1555 1555 2.19 LINK SG CYS B 42 ZN ZN B 161 1555 1555 2.31 LINK SG CYS B 45 ZN ZN B 161 1555 1555 2.32 SITE 1 AC1 4 CYS A 22 CYS A 25 CYS A 42 CYS A 45 SITE 1 AC2 5 GLY A -2 HIS A 0 MET A 1 SER A 133 SITE 2 AC2 5 LEU A 134 SITE 1 AC3 2 ARG A 114 HOH A 319 SITE 1 AC4 4 CYS B 22 CYS B 25 CYS B 42 CYS B 45 CRYST1 95.900 95.900 92.800 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010428 0.006020 0.000000 0.00000 SCALE2 0.000000 0.012041 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010776 0.00000