data_3SV5 # _entry.id 3SV5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SV5 pdb_00003sv5 10.2210/pdb3sv5/pdb RCSB RCSB066690 ? ? WWPDB D_1000066690 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SRY 'Engineered high-affinity halide-binding protein derived from YFP: halide-free' unspecified PDB 3SS0 'Engineered high-affinity halide-binding protein derived from YFP: fluoride complex' unspecified PDB 3SSH 'Engineered high-affinity halide-binding protein derived from YFP: chloride complex' unspecified PDB 3SSK 'Engineered high-affinity halide-binding protein derived from YFP: bromide complex' unspecified PDB 3SSL 'Engineered high-affinity halide-binding protein derived from YFP: iodide complex' unspecified PDB 3SSP 'Engineered low-affinity halide-binding protein derived from YFP: halide-free' unspecified PDB 3SST 'Engineered low-affinity halide-binding protein derived from YFP: chloride complex' unspecified PDB 3SSV 'Engineered low-affinity halide-binding protein derived from YFP: fluoride complex' unspecified PDB 3SSY 'Engineered low-affinity halide-binding protein derived from YFP: iodide complex' unspecified PDB 3SVE 'Engineered low-affinity halide-binding protein derived from YFP: bromide complex' unspecified PDB 3ST0 'Engineered medium-affinity halide-binding protein derived from YFP: halide-free' unspecified PDB 3SVB 'Engineered medium-affinity halide-binding protein derived from YFP: fluoride complex' unspecified PDB 3SVC 'Engineered medium-affinity halide-binding protein derived from YFP: chloride complex' unspecified PDB 3SVD 'Engineered medium-affinity halide-binding protein derived from YFP: bromide complex' unspecified # _pdbx_database_status.entry_id 3SV5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-07-12 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, W.' 1 'Grimley, J.S.' 2 'Beese, L.S.' 3 'Hellinga, H.W.' 4 # _citation.id primary _citation.title 'Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation.' _citation.journal_abbrev J.Neurosci. _citation.journal_volume 33 _citation.page_first 16297 _citation.page_last 16309 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 0270-6474 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24107961 _citation.pdbx_database_id_DOI 10.1523/JNEUROSCI.4616-11.2013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Grimley, J.S.' 1 ? primary 'Li, L.' 2 ? primary 'Wang, W.' 3 ? primary 'Wen, L.' 4 ? primary 'Beese, L.S.' 5 ? primary 'Hellinga, H.W.' 6 ? primary 'Augustine, G.J.' 7 ? # _cell.entry_id 3SV5 _cell.length_a 51.488 _cell.length_b 63.025 _cell.length_c 66.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SV5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Green fluorescent protein' 29307.723 1 ? 'Q69T, S72A, K79R, V163A, T203Y, H231L' ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 non-polymer syn 'IODIDE ION' 126.904 4 ? ? ? ? 4 non-polymer syn 'FORMIC ACID' 46.025 1 ? ? ? ? 5 water nat water 18.015 244 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTF(CR2)VTCFARYPDH MRQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQ KNGIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGMDELY KGGSNDYKDDDDKGGSHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFGYGVTCFARYPDHMR QHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKN GIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGMDELYKG GSNDYKDDDDKGGSHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 SER n 1 4 LYS n 1 5 GLY n 1 6 GLU n 1 7 GLU n 1 8 LEU n 1 9 PHE n 1 10 THR n 1 11 GLY n 1 12 VAL n 1 13 VAL n 1 14 PRO n 1 15 ILE n 1 16 LEU n 1 17 VAL n 1 18 GLU n 1 19 LEU n 1 20 ASP n 1 21 GLY n 1 22 ASP n 1 23 VAL n 1 24 ASN n 1 25 GLY n 1 26 HIS n 1 27 LYS n 1 28 PHE n 1 29 SER n 1 30 VAL n 1 31 SER n 1 32 GLY n 1 33 GLU n 1 34 GLY n 1 35 GLU n 1 36 GLY n 1 37 ASP n 1 38 ALA n 1 39 THR n 1 40 TYR n 1 41 GLY n 1 42 LYS n 1 43 LEU n 1 44 THR n 1 45 LEU n 1 46 LYS n 1 47 PHE n 1 48 ILE n 1 49 CYS n 1 50 THR n 1 51 THR n 1 52 GLY n 1 53 LYS n 1 54 LEU n 1 55 PRO n 1 56 VAL n 1 57 PRO n 1 58 TRP n 1 59 PRO n 1 60 THR n 1 61 LEU n 1 62 VAL n 1 63 THR n 1 64 THR n 1 65 PHE n 1 66 CR2 n 1 67 VAL n 1 68 THR n 1 69 CYS n 1 70 PHE n 1 71 ALA n 1 72 ARG n 1 73 TYR n 1 74 PRO n 1 75 ASP n 1 76 HIS n 1 77 MET n 1 78 ARG n 1 79 GLN n 1 80 HIS n 1 81 ASP n 1 82 PHE n 1 83 PHE n 1 84 LYS n 1 85 SER n 1 86 ALA n 1 87 MET n 1 88 PRO n 1 89 GLU n 1 90 GLY n 1 91 TYR n 1 92 VAL n 1 93 GLN n 1 94 GLU n 1 95 ARG n 1 96 THR n 1 97 ILE n 1 98 PHE n 1 99 PHE n 1 100 LYS n 1 101 ASP n 1 102 ASP n 1 103 GLY n 1 104 ASN n 1 105 TYR n 1 106 LYS n 1 107 THR n 1 108 ARG n 1 109 ALA n 1 110 GLU n 1 111 VAL n 1 112 LYS n 1 113 PHE n 1 114 GLU n 1 115 GLY n 1 116 ASP n 1 117 THR n 1 118 LEU n 1 119 VAL n 1 120 ASN n 1 121 ARG n 1 122 ILE n 1 123 GLU n 1 124 LEU n 1 125 LYS n 1 126 GLY n 1 127 ILE n 1 128 ASP n 1 129 PHE n 1 130 LYS n 1 131 GLU n 1 132 ASP n 1 133 GLY n 1 134 ASN n 1 135 ILE n 1 136 LEU n 1 137 GLY n 1 138 HIS n 1 139 LYS n 1 140 LEU n 1 141 GLU n 1 142 TYR n 1 143 ASN n 1 144 TYR n 1 145 ASN n 1 146 SER n 1 147 HIS n 1 148 ASN n 1 149 VAL n 1 150 TYR n 1 151 ILE n 1 152 MET n 1 153 ALA n 1 154 ASP n 1 155 LYS n 1 156 GLN n 1 157 LYS n 1 158 ASN n 1 159 GLY n 1 160 ILE n 1 161 LYS n 1 162 ALA n 1 163 ASN n 1 164 PHE n 1 165 LYS n 1 166 ILE n 1 167 ARG n 1 168 HIS n 1 169 ASN n 1 170 ILE n 1 171 GLU n 1 172 ASP n 1 173 GLY n 1 174 SER n 1 175 VAL n 1 176 GLN n 1 177 LEU n 1 178 ALA n 1 179 ASP n 1 180 HIS n 1 181 TYR n 1 182 GLN n 1 183 GLN n 1 184 ASN n 1 185 THR n 1 186 PRO n 1 187 ILE n 1 188 GLY n 1 189 ASP n 1 190 GLY n 1 191 PRO n 1 192 VAL n 1 193 LEU n 1 194 LEU n 1 195 PRO n 1 196 ASP n 1 197 ASN n 1 198 HIS n 1 199 TYR n 1 200 LEU n 1 201 SER n 1 202 TYR n 1 203 GLN n 1 204 SER n 1 205 ALA n 1 206 LEU n 1 207 SER n 1 208 LYS n 1 209 ASP n 1 210 PRO n 1 211 ASN n 1 212 GLU n 1 213 LYS n 1 214 ARG n 1 215 ASP n 1 216 HIS n 1 217 MET n 1 218 VAL n 1 219 LEU n 1 220 LEU n 1 221 GLU n 1 222 PHE n 1 223 VAL n 1 224 THR n 1 225 ALA n 1 226 ALA n 1 227 GLY n 1 228 ILE n 1 229 THR n 1 230 LEU n 1 231 GLY n 1 232 MET n 1 233 ASP n 1 234 GLU n 1 235 LEU n 1 236 TYR n 1 237 LYS n 1 238 GLY n 1 239 GLY n 1 240 SER n 1 241 ASN n 1 242 ASP n 1 243 TYR n 1 244 LYS n 1 245 ASP n 1 246 ASP n 1 247 ASP n 1 248 ASP n 1 249 LYS n 1 250 GLY n 1 251 GLY n 1 252 SER n 1 253 HIS n 1 254 HIS n 1 255 HIS n 1 256 HIS n 1 257 HIS n 1 258 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Jellyfish _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GFP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details synthetic _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aequorea victoria' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6100 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain KRX _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pUC19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GFP_AEQVI _struct_ref.pdbx_db_accession P42212 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQ HDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNG IKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3SV5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 237 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42212 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 238 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3SV5 VAL A 2 ? UNP P42212 ? ? insertion 1 1 1 3SV5 CR2 A 66 ? UNP P42212 SER 65 chromophore 66 2 1 3SV5 CR2 A 66 ? UNP P42212 TYR 66 chromophore 66 3 1 3SV5 CR2 A 66 ? UNP P42212 GLY 67 chromophore 66 4 1 3SV5 THR A 68 ? UNP P42212 GLN 69 'engineered mutation' 69 5 1 3SV5 ALA A 71 ? UNP P42212 SER 72 'engineered mutation' 72 6 1 3SV5 ARG A 78 ? UNP P42212 LYS 79 'engineered mutation' 79 7 1 3SV5 ALA A 162 ? UNP P42212 VAL 163 'engineered mutation' 163 8 1 3SV5 TYR A 202 ? UNP P42212 THR 203 'engineered mutation' 203 9 1 3SV5 LEU A 230 ? UNP P42212 HIS 231 'engineered mutation' 231 10 1 3SV5 GLY A 238 ? UNP P42212 ? ? 'expression tag' 239 11 1 3SV5 GLY A 239 ? UNP P42212 ? ? 'expression tag' 240 12 1 3SV5 SER A 240 ? UNP P42212 ? ? 'expression tag' 241 13 1 3SV5 ASN A 241 ? UNP P42212 ? ? 'expression tag' 242 14 1 3SV5 ASP A 242 ? UNP P42212 ? ? 'expression tag' 243 15 1 3SV5 TYR A 243 ? UNP P42212 ? ? 'expression tag' 244 16 1 3SV5 LYS A 244 ? UNP P42212 ? ? 'expression tag' 245 17 1 3SV5 ASP A 245 ? UNP P42212 ? ? 'expression tag' 246 18 1 3SV5 ASP A 246 ? UNP P42212 ? ? 'expression tag' 247 19 1 3SV5 ASP A 247 ? UNP P42212 ? ? 'expression tag' 248 20 1 3SV5 ASP A 248 ? UNP P42212 ? ? 'expression tag' 249 21 1 3SV5 LYS A 249 ? UNP P42212 ? ? 'expression tag' 250 22 1 3SV5 GLY A 250 ? UNP P42212 ? ? 'expression tag' 251 23 1 3SV5 GLY A 251 ? UNP P42212 ? ? 'expression tag' 252 24 1 3SV5 SER A 252 ? UNP P42212 ? ? 'expression tag' 253 25 1 3SV5 HIS A 253 ? UNP P42212 ? ? 'expression tag' 254 26 1 3SV5 HIS A 254 ? UNP P42212 ? ? 'expression tag' 255 27 1 3SV5 HIS A 255 ? UNP P42212 ? ? 'expression tag' 256 28 1 3SV5 HIS A 256 ? UNP P42212 ? ? 'expression tag' 257 29 1 3SV5 HIS A 257 ? UNP P42212 ? ? 'expression tag' 258 30 1 3SV5 HIS A 258 ? UNP P42212 ? ? 'expression tag' 259 31 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CR2 'L-peptide linking' n '{(4Z)-2-(aminomethyl)-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'CHROMOPHORE (GLY-TYR-GLY)' 'C13 H13 N3 O4' 275.260 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3SV5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '21% PEG2000, 50 mM sodium acetate, 90 mM magnesium chloride, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 290K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-12-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1169 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 12.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 12.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1169 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3SV5 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.530 _reflns.number_obs 32263 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 1.530 1.560 94.600 0.472 ? ? 6.700 ? ? ? ? ? ? 1 2 1.560 1.580 95.000 0.393 ? ? 6.700 ? ? ? ? ? ? 1 3 1.580 1.620 94.900 0.334 ? ? 6.700 ? ? ? ? ? ? 1 4 1.620 1.650 95.800 0.278 ? ? 6.800 ? ? ? ? ? ? 1 5 1.650 1.680 95.900 0.235 ? ? 6.800 ? ? ? ? ? ? 1 6 1.680 1.720 95.500 0.197 ? ? 6.800 ? ? ? ? ? ? 1 7 1.720 1.770 96.300 0.182 ? ? 6.800 ? ? ? ? ? ? 1 8 1.770 1.810 97.800 0.147 ? ? 6.700 ? ? ? ? ? ? 1 9 1.810 1.870 97.600 0.117 ? ? 6.800 ? ? ? ? ? ? 1 10 1.870 1.930 97.600 0.098 ? ? 6.800 ? ? ? ? ? ? 1 11 1.930 2.000 97.700 0.080 ? ? 6.800 ? ? ? ? ? ? 1 12 2.000 2.080 98.400 0.066 ? ? 6.800 ? ? ? ? ? ? 1 13 2.080 2.170 98.600 0.061 ? ? 6.800 ? ? ? ? ? ? 1 14 2.170 2.290 98.900 0.060 ? ? 6.900 ? ? ? ? ? ? 1 15 2.290 2.430 99.000 0.054 ? ? 7.000 ? ? ? ? ? ? 1 16 2.430 2.620 98.900 0.047 ? ? 7.100 ? ? ? ? ? ? 1 17 2.620 2.880 99.300 0.041 ? ? 6.900 ? ? ? ? ? ? 1 18 2.880 3.300 99.300 0.035 ? ? 6.800 ? ? ? ? ? ? 1 19 3.300 4.150 99.400 0.030 ? ? 7.200 ? ? ? ? ? ? 1 20 4.150 50.000 96.800 0.031 ? ? 6.500 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3SV5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 32217 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.604 _refine.ls_d_res_high 1.530 _refine.ls_percent_reflns_obs 97.36 _refine.ls_R_factor_obs 0.1612 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1600 _refine.ls_R_factor_R_free 0.1825 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.10 _refine.ls_number_reflns_R_free 1643 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.050 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.2998 _refine.aniso_B[2][2] 1.3736 _refine.aniso_B[3][3] -0.0739 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.441 _refine.solvent_model_param_bsol 49.287 _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.77 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.34 _refine.pdbx_overall_phase_error 17.10 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1833 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 244 _refine_hist.number_atoms_total 2088 _refine_hist.d_res_high 1.530 _refine_hist.d_res_low 45.604 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.012 ? ? 1943 'X-RAY DIFFRACTION' ? f_angle_d 1.485 ? ? 2636 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.298 ? ? 720 'X-RAY DIFFRACTION' ? f_chiral_restr 0.083 ? ? 282 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 348 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.5304 1.5754 2414 0.2179 94.00 0.3007 . . 133 . . . . 'X-RAY DIFFRACTION' . 1.5754 1.6263 2442 0.1884 95.00 0.2286 . . 133 . . . . 'X-RAY DIFFRACTION' . 1.6263 1.6844 2479 0.1780 96.00 0.2112 . . 122 . . . . 'X-RAY DIFFRACTION' . 1.6844 1.7518 2475 0.1654 96.00 0.2100 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.7518 1.8316 2538 0.1651 97.00 0.2180 . . 125 . . . . 'X-RAY DIFFRACTION' . 1.8316 1.9281 2524 0.1539 98.00 0.1879 . . 131 . . . . 'X-RAY DIFFRACTION' . 1.9281 2.0489 2562 0.1476 98.00 0.1540 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.0489 2.2071 2569 0.1453 99.00 0.1970 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.2071 2.4292 2600 0.1452 99.00 0.1513 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.4292 2.7807 2591 0.1531 99.00 0.1728 . . 166 . . . . 'X-RAY DIFFRACTION' . 2.7807 3.5032 2657 0.1546 99.00 0.1907 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.5032 45.6241 2723 0.1695 98.00 0.1656 . . 146 . . . . # _struct.entry_id 3SV5 _struct.title 'Engineered medium-affinity halide-binding protein derived from YFP: iodide complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SV5 _struct_keywords.text 'beta barrel, luminescent protein, yellow fluorescent protein, imaging reagent, HALIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'HALIDE BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 3 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? LEU A 8 ? SER A 2 LEU A 7 1 ? 6 HELX_P HELX_P2 2 PRO A 57 ? VAL A 62 ? PRO A 56 VAL A 61 5 ? 6 HELX_P HELX_P3 3 VAL A 67 ? ALA A 71 ? VAL A 68 ALA A 72 5 ? 5 HELX_P HELX_P4 4 PRO A 74 ? HIS A 80 ? PRO A 75 HIS A 81 5 ? 7 HELX_P HELX_P5 5 ASP A 81 ? ALA A 86 ? ASP A 82 ALA A 87 1 ? 6 HELX_P HELX_P6 6 LYS A 155 ? ASN A 158 ? LYS A 156 ASN A 159 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PHE 65 C ? ? ? 1_555 A CR2 66 N1 ? ? A PHE 64 A CR2 66 1_555 ? ? ? ? ? ? ? 1.456 ? ? covale2 covale both ? A CR2 66 C3 ? ? ? 1_555 A VAL 67 N ? ? A CR2 66 A VAL 68 1_555 ? ? ? ? ? ? ? 1.309 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 87 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 88 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.31 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 12 ? VAL A 23 ? VAL A 11 VAL A 22 A 2 HIS A 26 ? ASP A 37 ? HIS A 25 ASP A 36 A 3 LYS A 42 ? CYS A 49 ? LYS A 41 CYS A 48 A 4 HIS A 216 ? ALA A 226 ? HIS A 217 ALA A 227 A 5 HIS A 198 ? SER A 207 ? HIS A 199 SER A 208 A 6 HIS A 147 ? ASP A 154 ? HIS A 148 ASP A 155 A 7 GLY A 159 ? ASN A 169 ? GLY A 160 ASN A 170 A 8 VAL A 175 ? PRO A 186 ? VAL A 176 PRO A 187 A 9 TYR A 91 ? PHE A 99 ? TYR A 92 PHE A 100 A 10 ASN A 104 ? GLU A 114 ? ASN A 105 GLU A 115 A 11 THR A 117 ? ILE A 127 ? THR A 118 ILE A 128 A 12 VAL A 12 ? VAL A 23 ? VAL A 11 VAL A 22 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 21 ? N GLY A 20 O PHE A 28 ? O PHE A 27 A 2 3 N ASP A 37 ? N ASP A 36 O LYS A 42 ? O LYS A 41 A 3 4 N PHE A 47 ? N PHE A 46 O MET A 217 ? O MET A 218 A 4 5 O THR A 224 ? O THR A 225 N SER A 201 ? N SER A 202 A 5 6 O TYR A 202 ? O TYR A 203 N HIS A 147 ? N HIS A 148 A 6 7 N ASP A 154 ? N ASP A 155 O GLY A 159 ? O GLY A 160 A 7 8 N PHE A 164 ? N PHE A 165 O HIS A 180 ? O HIS A 181 A 8 9 O THR A 185 ? O THR A 186 N VAL A 92 ? N VAL A 93 A 9 10 N ILE A 97 ? N ILE A 98 O TYR A 105 ? O TYR A 106 A 10 11 N LYS A 112 ? N LYS A 113 O VAL A 119 ? O VAL A 120 A 11 12 O GLY A 126 ? O GLY A 127 N ASP A 22 ? N ASP A 21 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 260 ? 7 'BINDING SITE FOR RESIDUE EDO A 260' AC2 Software A IOD 261 ? 2 'BINDING SITE FOR RESIDUE IOD A 261' AC3 Software A IOD 262 ? 3 'BINDING SITE FOR RESIDUE IOD A 262' AC4 Software A FMT 263 ? 6 'BINDING SITE FOR RESIDUE FMT A 263' AC5 Software A IOD 264 ? 1 'BINDING SITE FOR RESIDUE IOD A 264' AC6 Software A IOD 265 ? 1 'BINDING SITE FOR RESIDUE IOD A 265' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 CR2 A 66 ? CR2 A 66 . ? 1_555 ? 2 AC1 7 THR A 68 ? THR A 69 . ? 1_555 ? 3 AC1 7 GLN A 93 ? GLN A 94 . ? 1_555 ? 4 AC1 7 ARG A 95 ? ARG A 96 . ? 1_555 ? 5 AC1 7 VAL A 149 ? VAL A 150 . ? 1_555 ? 6 AC1 7 GLN A 182 ? GLN A 183 . ? 1_555 ? 7 AC1 7 TYR A 202 ? TYR A 203 . ? 1_555 ? 8 AC2 2 THR A 68 ? THR A 69 . ? 1_555 ? 9 AC2 2 TYR A 202 ? TYR A 203 . ? 1_555 ? 10 AC3 3 GLN A 93 ? GLN A 94 . ? 1_555 ? 11 AC3 3 THR A 107 ? THR A 108 . ? 1_555 ? 12 AC3 3 HOH H . ? HOH A 268 . ? 1_555 ? 13 AC4 6 LEU A 43 ? LEU A 42 . ? 1_555 ? 14 AC4 6 CR2 A 66 ? CR2 A 66 . ? 1_555 ? 15 AC4 6 VAL A 67 ? VAL A 68 . ? 1_555 ? 16 AC4 6 THR A 68 ? THR A 69 . ? 1_555 ? 17 AC4 6 TYR A 202 ? TYR A 203 . ? 1_555 ? 18 AC4 6 GLU A 221 ? GLU A 222 . ? 1_555 ? 19 AC5 1 TRP A 58 ? TRP A 57 . ? 1_555 ? 20 AC6 1 VAL A 175 ? VAL A 176 . ? 1_555 ? # _atom_sites.entry_id 3SV5 _atom_sites.fract_transf_matrix[1][1] 0.019422 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015867 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015135 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 VAL 2 1 1 VAL VAL A . n A 1 3 SER 3 2 2 SER SER A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 VAL 12 11 11 VAL VAL A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 PRO 14 13 13 PRO PRO A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 GLU 18 17 17 GLU GLU A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 ASP 20 19 19 ASP ASP A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 VAL 23 22 22 VAL VAL A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 HIS 26 25 25 HIS HIS A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 PHE 28 27 27 PHE PHE A . n A 1 29 SER 29 28 28 SER SER A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 SER 31 30 30 SER SER A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 GLU 33 32 32 GLU GLU A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 ASP 37 36 36 ASP ASP A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 THR 39 38 38 THR THR A . n A 1 40 TYR 40 39 39 TYR TYR A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 THR 44 43 43 THR THR A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 PHE 47 46 46 PHE PHE A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 CYS 49 48 48 CYS CYS A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 PRO 55 54 54 PRO PRO A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 PRO 57 56 56 PRO PRO A . n A 1 58 TRP 58 57 57 TRP TRP A . n A 1 59 PRO 59 58 58 PRO PRO A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 PHE 65 64 64 PHE PHE A . n A 1 66 CR2 66 66 66 CR2 CR2 A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 THR 68 69 69 THR THR A . n A 1 69 CYS 69 70 70 CYS CYS A . n A 1 70 PHE 70 71 71 PHE PHE A . n A 1 71 ALA 71 72 72 ALA ALA A . n A 1 72 ARG 72 73 73 ARG ARG A . n A 1 73 TYR 73 74 74 TYR TYR A . n A 1 74 PRO 74 75 75 PRO PRO A . n A 1 75 ASP 75 76 76 ASP ASP A . n A 1 76 HIS 76 77 77 HIS HIS A . n A 1 77 MET 77 78 78 MET MET A . n A 1 78 ARG 78 79 79 ARG ARG A . n A 1 79 GLN 79 80 80 GLN GLN A . n A 1 80 HIS 80 81 81 HIS HIS A . n A 1 81 ASP 81 82 82 ASP ASP A . n A 1 82 PHE 82 83 83 PHE PHE A . n A 1 83 PHE 83 84 84 PHE PHE A . n A 1 84 LYS 84 85 85 LYS LYS A . n A 1 85 SER 85 86 86 SER SER A . n A 1 86 ALA 86 87 87 ALA ALA A . n A 1 87 MET 87 88 88 MET MET A . n A 1 88 PRO 88 89 89 PRO PRO A . n A 1 89 GLU 89 90 90 GLU GLU A . n A 1 90 GLY 90 91 91 GLY GLY A . n A 1 91 TYR 91 92 92 TYR TYR A . n A 1 92 VAL 92 93 93 VAL VAL A . n A 1 93 GLN 93 94 94 GLN GLN A . n A 1 94 GLU 94 95 95 GLU GLU A . n A 1 95 ARG 95 96 96 ARG ARG A . n A 1 96 THR 96 97 97 THR THR A . n A 1 97 ILE 97 98 98 ILE ILE A . n A 1 98 PHE 98 99 99 PHE PHE A . n A 1 99 PHE 99 100 100 PHE PHE A . n A 1 100 LYS 100 101 101 LYS LYS A . n A 1 101 ASP 101 102 102 ASP ASP A . n A 1 102 ASP 102 103 103 ASP ASP A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 ASN 104 105 105 ASN ASN A . n A 1 105 TYR 105 106 106 TYR TYR A . n A 1 106 LYS 106 107 107 LYS LYS A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 ARG 108 109 109 ARG ARG A . n A 1 109 ALA 109 110 110 ALA ALA A . n A 1 110 GLU 110 111 111 GLU GLU A . n A 1 111 VAL 111 112 112 VAL VAL A . n A 1 112 LYS 112 113 113 LYS LYS A . n A 1 113 PHE 113 114 114 PHE PHE A . n A 1 114 GLU 114 115 115 GLU GLU A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 ASP 116 117 117 ASP ASP A . n A 1 117 THR 117 118 118 THR THR A . n A 1 118 LEU 118 119 119 LEU LEU A . n A 1 119 VAL 119 120 120 VAL VAL A . n A 1 120 ASN 120 121 121 ASN ASN A . n A 1 121 ARG 121 122 122 ARG ARG A . n A 1 122 ILE 122 123 123 ILE ILE A . n A 1 123 GLU 123 124 124 GLU GLU A . n A 1 124 LEU 124 125 125 LEU LEU A . n A 1 125 LYS 125 126 126 LYS LYS A . n A 1 126 GLY 126 127 127 GLY GLY A . n A 1 127 ILE 127 128 128 ILE ILE A . n A 1 128 ASP 128 129 129 ASP ASP A . n A 1 129 PHE 129 130 130 PHE PHE A . n A 1 130 LYS 130 131 131 LYS LYS A . n A 1 131 GLU 131 132 132 GLU GLU A . n A 1 132 ASP 132 133 133 ASP ASP A . n A 1 133 GLY 133 134 134 GLY GLY A . n A 1 134 ASN 134 135 135 ASN ASN A . n A 1 135 ILE 135 136 136 ILE ILE A . n A 1 136 LEU 136 137 137 LEU LEU A . n A 1 137 GLY 137 138 138 GLY GLY A . n A 1 138 HIS 138 139 139 HIS HIS A . n A 1 139 LYS 139 140 140 LYS LYS A . n A 1 140 LEU 140 141 141 LEU LEU A . n A 1 141 GLU 141 142 142 GLU GLU A . n A 1 142 TYR 142 143 143 TYR TYR A . n A 1 143 ASN 143 144 144 ASN ASN A . n A 1 144 TYR 144 145 145 TYR TYR A . n A 1 145 ASN 145 146 146 ASN ASN A . n A 1 146 SER 146 147 147 SER SER A . n A 1 147 HIS 147 148 148 HIS HIS A . n A 1 148 ASN 148 149 149 ASN ASN A . n A 1 149 VAL 149 150 150 VAL VAL A . n A 1 150 TYR 150 151 151 TYR TYR A . n A 1 151 ILE 151 152 152 ILE ILE A . n A 1 152 MET 152 153 153 MET MET A . n A 1 153 ALA 153 154 154 ALA ALA A . n A 1 154 ASP 154 155 155 ASP ASP A . n A 1 155 LYS 155 156 156 LYS LYS A . n A 1 156 GLN 156 157 157 GLN GLN A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 ASN 158 159 159 ASN ASN A . n A 1 159 GLY 159 160 160 GLY GLY A . n A 1 160 ILE 160 161 161 ILE ILE A . n A 1 161 LYS 161 162 162 LYS LYS A . n A 1 162 ALA 162 163 163 ALA ALA A . n A 1 163 ASN 163 164 164 ASN ASN A . n A 1 164 PHE 164 165 165 PHE PHE A . n A 1 165 LYS 165 166 166 LYS LYS A . n A 1 166 ILE 166 167 167 ILE ILE A . n A 1 167 ARG 167 168 168 ARG ARG A . n A 1 168 HIS 168 169 169 HIS HIS A . n A 1 169 ASN 169 170 170 ASN ASN A . n A 1 170 ILE 170 171 171 ILE ILE A . n A 1 171 GLU 171 172 172 GLU GLU A . n A 1 172 ASP 172 173 173 ASP ASP A . n A 1 173 GLY 173 174 174 GLY GLY A . n A 1 174 SER 174 175 175 SER SER A . n A 1 175 VAL 175 176 176 VAL VAL A . n A 1 176 GLN 176 177 177 GLN GLN A . n A 1 177 LEU 177 178 178 LEU LEU A . n A 1 178 ALA 178 179 179 ALA ALA A . n A 1 179 ASP 179 180 180 ASP ASP A . n A 1 180 HIS 180 181 181 HIS HIS A . n A 1 181 TYR 181 182 182 TYR TYR A . n A 1 182 GLN 182 183 183 GLN GLN A . n A 1 183 GLN 183 184 184 GLN GLN A . n A 1 184 ASN 184 185 185 ASN ASN A . n A 1 185 THR 185 186 186 THR THR A . n A 1 186 PRO 186 187 187 PRO PRO A . n A 1 187 ILE 187 188 188 ILE ILE A . n A 1 188 GLY 188 189 189 GLY GLY A . n A 1 189 ASP 189 190 190 ASP ASP A . n A 1 190 GLY 190 191 191 GLY GLY A . n A 1 191 PRO 191 192 192 PRO PRO A . n A 1 192 VAL 192 193 193 VAL VAL A . n A 1 193 LEU 193 194 194 LEU LEU A . n A 1 194 LEU 194 195 195 LEU LEU A . n A 1 195 PRO 195 196 196 PRO PRO A . n A 1 196 ASP 196 197 197 ASP ASP A . n A 1 197 ASN 197 198 198 ASN ASN A . n A 1 198 HIS 198 199 199 HIS HIS A . n A 1 199 TYR 199 200 200 TYR TYR A . n A 1 200 LEU 200 201 201 LEU LEU A . n A 1 201 SER 201 202 202 SER SER A . n A 1 202 TYR 202 203 203 TYR TYR A . n A 1 203 GLN 203 204 204 GLN GLN A . n A 1 204 SER 204 205 205 SER SER A . n A 1 205 ALA 205 206 206 ALA ALA A . n A 1 206 LEU 206 207 207 LEU LEU A . n A 1 207 SER 207 208 208 SER SER A . n A 1 208 LYS 208 209 209 LYS LYS A . n A 1 209 ASP 209 210 210 ASP ASP A . n A 1 210 PRO 210 211 211 PRO PRO A . n A 1 211 ASN 211 212 212 ASN ASN A . n A 1 212 GLU 212 213 213 GLU GLU A . n A 1 213 LYS 213 214 214 LYS LYS A . n A 1 214 ARG 214 215 215 ARG ARG A . n A 1 215 ASP 215 216 216 ASP ASP A . n A 1 216 HIS 216 217 217 HIS HIS A . n A 1 217 MET 217 218 218 MET MET A . n A 1 218 VAL 218 219 219 VAL VAL A . n A 1 219 LEU 219 220 220 LEU LEU A . n A 1 220 LEU 220 221 221 LEU LEU A . n A 1 221 GLU 221 222 222 GLU GLU A . n A 1 222 PHE 222 223 223 PHE PHE A . n A 1 223 VAL 223 224 224 VAL VAL A . n A 1 224 THR 224 225 225 THR THR A . n A 1 225 ALA 225 226 226 ALA ALA A . n A 1 226 ALA 226 227 227 ALA ALA A . n A 1 227 GLY 227 228 228 GLY GLY A . n A 1 228 ILE 228 229 229 ILE ILE A . n A 1 229 THR 229 230 230 THR THR A . n A 1 230 LEU 230 231 ? ? ? A . n A 1 231 GLY 231 232 ? ? ? A . n A 1 232 MET 232 233 ? ? ? A . n A 1 233 ASP 233 234 ? ? ? A . n A 1 234 GLU 234 235 ? ? ? A . n A 1 235 LEU 235 236 ? ? ? A . n A 1 236 TYR 236 237 ? ? ? A . n A 1 237 LYS 237 238 ? ? ? A . n A 1 238 GLY 238 239 ? ? ? A . n A 1 239 GLY 239 240 ? ? ? A . n A 1 240 SER 240 241 ? ? ? A . n A 1 241 ASN 241 242 ? ? ? A . n A 1 242 ASP 242 243 ? ? ? A . n A 1 243 TYR 243 244 ? ? ? A . n A 1 244 LYS 244 245 ? ? ? A . n A 1 245 ASP 245 246 ? ? ? A . n A 1 246 ASP 246 247 ? ? ? A . n A 1 247 ASP 247 248 ? ? ? A . n A 1 248 ASP 248 249 ? ? ? A . n A 1 249 LYS 249 250 ? ? ? A . n A 1 250 GLY 250 251 ? ? ? A . n A 1 251 GLY 251 252 ? ? ? A . n A 1 252 SER 252 253 ? ? ? A . n A 1 253 HIS 253 254 ? ? ? A . n A 1 254 HIS 254 255 ? ? ? A . n A 1 255 HIS 255 256 ? ? ? A . n A 1 256 HIS 256 257 ? ? ? A . n A 1 257 HIS 257 258 ? ? ? A . n A 1 258 HIS 258 259 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 260 260 EDO EDO A . C 3 IOD 1 261 261 IOD IOD A . D 3 IOD 1 262 262 IOD IOD A . E 4 FMT 1 263 263 FMT FMT A . F 3 IOD 1 264 264 IOD IOD A . G 3 IOD 1 265 265 IOD IOD A . H 5 HOH 1 266 266 HOH HOH A . H 5 HOH 2 267 267 HOH HOH A . H 5 HOH 3 268 268 HOH HOH A . H 5 HOH 4 269 269 HOH HOH A . H 5 HOH 5 270 270 HOH HOH A . H 5 HOH 6 271 271 HOH HOH A . H 5 HOH 7 272 272 HOH HOH A . H 5 HOH 8 273 273 HOH HOH A . H 5 HOH 9 274 274 HOH HOH A . H 5 HOH 10 275 275 HOH HOH A . H 5 HOH 11 276 276 HOH HOH A . H 5 HOH 12 277 277 HOH HOH A . H 5 HOH 13 278 278 HOH HOH A . H 5 HOH 14 279 279 HOH HOH A . H 5 HOH 15 280 280 HOH HOH A . H 5 HOH 16 281 281 HOH HOH A . H 5 HOH 17 282 282 HOH HOH A . H 5 HOH 18 283 283 HOH HOH A . H 5 HOH 19 284 284 HOH HOH A . H 5 HOH 20 285 285 HOH HOH A . H 5 HOH 21 286 286 HOH HOH A . H 5 HOH 22 287 287 HOH HOH A . H 5 HOH 23 288 288 HOH HOH A . H 5 HOH 24 289 289 HOH HOH A . H 5 HOH 25 290 290 HOH HOH A . H 5 HOH 26 291 291 HOH HOH A . H 5 HOH 27 292 292 HOH HOH A . H 5 HOH 28 293 293 HOH HOH A . H 5 HOH 29 294 294 HOH HOH A . H 5 HOH 30 295 295 HOH HOH A . H 5 HOH 31 296 296 HOH HOH A . H 5 HOH 32 297 297 HOH HOH A . H 5 HOH 33 298 298 HOH HOH A . H 5 HOH 34 299 299 HOH HOH A . H 5 HOH 35 300 300 HOH HOH A . H 5 HOH 36 301 301 HOH HOH A . H 5 HOH 37 302 302 HOH HOH A . H 5 HOH 38 303 303 HOH HOH A . H 5 HOH 39 304 304 HOH HOH A . H 5 HOH 40 305 305 HOH HOH A . H 5 HOH 41 306 306 HOH HOH A . H 5 HOH 42 307 307 HOH HOH A . H 5 HOH 43 308 308 HOH HOH A . H 5 HOH 44 309 309 HOH HOH A . H 5 HOH 45 310 310 HOH HOH A . H 5 HOH 46 311 311 HOH HOH A . H 5 HOH 47 312 312 HOH HOH A . H 5 HOH 48 313 313 HOH HOH A . H 5 HOH 49 314 314 HOH HOH A . H 5 HOH 50 315 315 HOH HOH A . H 5 HOH 51 316 316 HOH HOH A . H 5 HOH 52 317 317 HOH HOH A . H 5 HOH 53 318 318 HOH HOH A . H 5 HOH 54 319 319 HOH HOH A . H 5 HOH 55 320 320 HOH HOH A . H 5 HOH 56 321 321 HOH HOH A . H 5 HOH 57 322 322 HOH HOH A . H 5 HOH 58 323 323 HOH HOH A . H 5 HOH 59 324 324 HOH HOH A . H 5 HOH 60 325 325 HOH HOH A . H 5 HOH 61 326 326 HOH HOH A . H 5 HOH 62 327 327 HOH HOH A . H 5 HOH 63 328 328 HOH HOH A . H 5 HOH 64 329 329 HOH HOH A . H 5 HOH 65 330 330 HOH HOH A . H 5 HOH 66 331 331 HOH HOH A . H 5 HOH 67 332 332 HOH HOH A . H 5 HOH 68 333 333 HOH HOH A . H 5 HOH 69 334 334 HOH HOH A . H 5 HOH 70 335 335 HOH HOH A . H 5 HOH 71 336 336 HOH HOH A . H 5 HOH 72 337 337 HOH HOH A . H 5 HOH 73 338 338 HOH HOH A . H 5 HOH 74 339 339 HOH HOH A . H 5 HOH 75 340 340 HOH HOH A . H 5 HOH 76 341 341 HOH HOH A . H 5 HOH 77 342 342 HOH HOH A . H 5 HOH 78 343 343 HOH HOH A . H 5 HOH 79 344 344 HOH HOH A . H 5 HOH 80 345 345 HOH HOH A . H 5 HOH 81 346 346 HOH HOH A . H 5 HOH 82 347 347 HOH HOH A . H 5 HOH 83 348 348 HOH HOH A . H 5 HOH 84 349 349 HOH HOH A . H 5 HOH 85 350 350 HOH HOH A . H 5 HOH 86 351 351 HOH HOH A . H 5 HOH 87 352 352 HOH HOH A . H 5 HOH 88 353 353 HOH HOH A . H 5 HOH 89 354 354 HOH HOH A . H 5 HOH 90 355 355 HOH HOH A . H 5 HOH 91 356 356 HOH HOH A . H 5 HOH 92 357 357 HOH HOH A . H 5 HOH 93 358 358 HOH HOH A . H 5 HOH 94 359 359 HOH HOH A . H 5 HOH 95 360 360 HOH HOH A . H 5 HOH 96 361 361 HOH HOH A . H 5 HOH 97 362 362 HOH HOH A . H 5 HOH 98 363 363 HOH HOH A . H 5 HOH 99 364 364 HOH HOH A . H 5 HOH 100 365 365 HOH HOH A . H 5 HOH 101 366 366 HOH HOH A . H 5 HOH 102 367 367 HOH HOH A . H 5 HOH 103 368 368 HOH HOH A . H 5 HOH 104 369 369 HOH HOH A . H 5 HOH 105 370 370 HOH HOH A . H 5 HOH 106 371 371 HOH HOH A . H 5 HOH 107 372 372 HOH HOH A . H 5 HOH 108 373 373 HOH HOH A . H 5 HOH 109 374 374 HOH HOH A . H 5 HOH 110 375 375 HOH HOH A . H 5 HOH 111 376 376 HOH HOH A . H 5 HOH 112 377 377 HOH HOH A . H 5 HOH 113 378 378 HOH HOH A . H 5 HOH 114 379 379 HOH HOH A . H 5 HOH 115 380 380 HOH HOH A . H 5 HOH 116 381 381 HOH HOH A . H 5 HOH 117 382 382 HOH HOH A . H 5 HOH 118 383 383 HOH HOH A . H 5 HOH 119 384 384 HOH HOH A . H 5 HOH 120 385 385 HOH HOH A . H 5 HOH 121 386 386 HOH HOH A . H 5 HOH 122 387 387 HOH HOH A . H 5 HOH 123 388 388 HOH HOH A . H 5 HOH 124 389 389 HOH HOH A . H 5 HOH 125 390 390 HOH HOH A . H 5 HOH 126 391 391 HOH HOH A . H 5 HOH 127 392 392 HOH HOH A . H 5 HOH 128 393 393 HOH HOH A . H 5 HOH 129 394 394 HOH HOH A . H 5 HOH 130 395 395 HOH HOH A . H 5 HOH 131 396 396 HOH HOH A . H 5 HOH 132 397 397 HOH HOH A . H 5 HOH 133 398 398 HOH HOH A . H 5 HOH 134 399 399 HOH HOH A . H 5 HOH 135 400 400 HOH HOH A . H 5 HOH 136 401 401 HOH HOH A . H 5 HOH 137 402 402 HOH HOH A . H 5 HOH 138 403 403 HOH HOH A . H 5 HOH 139 404 404 HOH HOH A . H 5 HOH 140 405 405 HOH HOH A . H 5 HOH 141 406 406 HOH HOH A . H 5 HOH 142 407 407 HOH HOH A . H 5 HOH 143 408 408 HOH HOH A . H 5 HOH 144 409 409 HOH HOH A . H 5 HOH 145 410 410 HOH HOH A . H 5 HOH 146 411 411 HOH HOH A . H 5 HOH 147 412 412 HOH HOH A . H 5 HOH 148 413 413 HOH HOH A . H 5 HOH 149 414 414 HOH HOH A . H 5 HOH 150 415 415 HOH HOH A . H 5 HOH 151 416 416 HOH HOH A . H 5 HOH 152 417 417 HOH HOH A . H 5 HOH 153 418 418 HOH HOH A . H 5 HOH 154 419 419 HOH HOH A . H 5 HOH 155 420 420 HOH HOH A . H 5 HOH 156 421 421 HOH HOH A . H 5 HOH 157 422 422 HOH HOH A . H 5 HOH 158 423 423 HOH HOH A . H 5 HOH 159 424 424 HOH HOH A . H 5 HOH 160 425 425 HOH HOH A . H 5 HOH 161 426 426 HOH HOH A . H 5 HOH 162 427 427 HOH HOH A . H 5 HOH 163 428 428 HOH HOH A . H 5 HOH 164 429 429 HOH HOH A . H 5 HOH 165 430 430 HOH HOH A . H 5 HOH 166 431 431 HOH HOH A . H 5 HOH 167 432 432 HOH HOH A . H 5 HOH 168 433 433 HOH HOH A . H 5 HOH 169 434 434 HOH HOH A . H 5 HOH 170 435 435 HOH HOH A . H 5 HOH 171 436 436 HOH HOH A . H 5 HOH 172 437 437 HOH HOH A . H 5 HOH 173 438 438 HOH HOH A . H 5 HOH 174 439 439 HOH HOH A . H 5 HOH 175 440 440 HOH HOH A . H 5 HOH 176 441 441 HOH HOH A . H 5 HOH 177 442 442 HOH HOH A . H 5 HOH 178 443 443 HOH HOH A . H 5 HOH 179 444 444 HOH HOH A . H 5 HOH 180 445 445 HOH HOH A . H 5 HOH 181 446 446 HOH HOH A . H 5 HOH 182 447 447 HOH HOH A . H 5 HOH 183 448 448 HOH HOH A . H 5 HOH 184 449 449 HOH HOH A . H 5 HOH 185 450 450 HOH HOH A . H 5 HOH 186 451 451 HOH HOH A . H 5 HOH 187 452 452 HOH HOH A . H 5 HOH 188 453 453 HOH HOH A . H 5 HOH 189 454 454 HOH HOH A . H 5 HOH 190 455 455 HOH HOH A . H 5 HOH 191 456 456 HOH HOH A . H 5 HOH 192 457 457 HOH HOH A . H 5 HOH 193 458 458 HOH HOH A . H 5 HOH 194 459 459 HOH HOH A . H 5 HOH 195 460 460 HOH HOH A . H 5 HOH 196 461 461 HOH HOH A . H 5 HOH 197 462 462 HOH HOH A . H 5 HOH 198 463 463 HOH HOH A . H 5 HOH 199 464 464 HOH HOH A . H 5 HOH 200 465 465 HOH HOH A . H 5 HOH 201 466 466 HOH HOH A . H 5 HOH 202 467 467 HOH HOH A . H 5 HOH 203 468 468 HOH HOH A . H 5 HOH 204 469 469 HOH HOH A . H 5 HOH 205 470 470 HOH HOH A . H 5 HOH 206 471 471 HOH HOH A . H 5 HOH 207 472 472 HOH HOH A . H 5 HOH 208 473 473 HOH HOH A . H 5 HOH 209 474 474 HOH HOH A . H 5 HOH 210 475 475 HOH HOH A . H 5 HOH 211 476 476 HOH HOH A . H 5 HOH 212 477 477 HOH HOH A . H 5 HOH 213 478 478 HOH HOH A . H 5 HOH 214 479 479 HOH HOH A . H 5 HOH 215 480 480 HOH HOH A . H 5 HOH 216 481 481 HOH HOH A . H 5 HOH 217 482 482 HOH HOH A . H 5 HOH 218 483 483 HOH HOH A . H 5 HOH 219 484 484 HOH HOH A . H 5 HOH 220 485 485 HOH HOH A . H 5 HOH 221 486 486 HOH HOH A . H 5 HOH 222 487 487 HOH HOH A . H 5 HOH 223 488 488 HOH HOH A . H 5 HOH 224 489 489 HOH HOH A . H 5 HOH 225 490 490 HOH HOH A . H 5 HOH 226 491 491 HOH HOH A . H 5 HOH 227 492 492 HOH HOH A . H 5 HOH 228 493 493 HOH HOH A . H 5 HOH 229 494 494 HOH HOH A . H 5 HOH 230 495 495 HOH HOH A . H 5 HOH 231 496 496 HOH HOH A . H 5 HOH 232 497 497 HOH HOH A . H 5 HOH 233 498 498 HOH HOH A . H 5 HOH 234 499 499 HOH HOH A . H 5 HOH 235 500 500 HOH HOH A . H 5 HOH 236 501 501 HOH HOH A . H 5 HOH 237 502 502 HOH HOH A . H 5 HOH 238 503 503 HOH HOH A . H 5 HOH 239 504 504 HOH HOH A . H 5 HOH 240 505 505 HOH HOH A . H 5 HOH 241 506 506 HOH HOH A . H 5 HOH 242 507 507 HOH HOH A . H 5 HOH 243 508 508 HOH HOH A . H 5 HOH 244 509 509 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CR2 66 A CR2 66 ? GLY 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 2 A CR2 66 A CR2 66 ? TYR 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 3 A CR2 66 A CR2 66 ? GLY 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-18 2 'Structure model' 1 1 2013-10-23 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHENIX 1.7.1_743 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_entry_details.entry_id 3SV5 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'UNP RESIDUE SER65 UNDERWENT MUTATION TO GLY. GLY65, TYR66, AND GLY67 CIRCULARIZED INTO ONE CHROMOPHORE (CR2).' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H3 A MET 0 ? ? O A HOH 497 ? ? 1.54 2 1 HE A ARG 73 ? ? O A HOH 371 ? ? 1.54 3 1 O A HOH 500 ? ? O A HOH 501 ? ? 1.82 4 1 N A MET 0 ? ? O A HOH 497 ? ? 1.91 5 1 O A HOH 482 ? ? O A HOH 483 ? ? 1.95 6 1 O A HOH 492 ? ? O A HOH 494 ? ? 1.96 7 1 O A HOH 446 ? ? O A HOH 499 ? ? 2.09 8 1 O A HOH 394 ? ? O A HOH 444 ? ? 2.09 9 1 O A HOH 400 ? ? O A HOH 401 ? ? 2.15 10 1 O A HOH 362 ? ? O A HOH 451 ? ? 2.15 11 1 O A HOH 295 ? ? O A HOH 392 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A VAL 1 ? ? 1_555 HE21 A GLN 184 ? ? 3_644 1.55 2 1 O A HOH 307 ? ? 1_555 O A HOH 402 ? ? 4_545 1.89 3 1 O A VAL 1 ? ? 1_555 NE2 A GLN 184 ? ? 3_644 2.08 4 1 O A HOH 486 ? ? 1_555 O A HOH 491 ? ? 3_654 2.10 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 103 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -154.96 _pdbx_validate_torsion.psi -157.06 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 231 ? A LEU 230 2 1 Y 1 A GLY 232 ? A GLY 231 3 1 Y 1 A MET 233 ? A MET 232 4 1 Y 1 A ASP 234 ? A ASP 233 5 1 Y 1 A GLU 235 ? A GLU 234 6 1 Y 1 A LEU 236 ? A LEU 235 7 1 Y 1 A TYR 237 ? A TYR 236 8 1 Y 1 A LYS 238 ? A LYS 237 9 1 Y 1 A GLY 239 ? A GLY 238 10 1 Y 1 A GLY 240 ? A GLY 239 11 1 Y 1 A SER 241 ? A SER 240 12 1 Y 1 A ASN 242 ? A ASN 241 13 1 Y 1 A ASP 243 ? A ASP 242 14 1 Y 1 A TYR 244 ? A TYR 243 15 1 Y 1 A LYS 245 ? A LYS 244 16 1 Y 1 A ASP 246 ? A ASP 245 17 1 Y 1 A ASP 247 ? A ASP 246 18 1 Y 1 A ASP 248 ? A ASP 247 19 1 Y 1 A ASP 249 ? A ASP 248 20 1 Y 1 A LYS 250 ? A LYS 249 21 1 Y 1 A GLY 251 ? A GLY 250 22 1 Y 1 A GLY 252 ? A GLY 251 23 1 Y 1 A SER 253 ? A SER 252 24 1 Y 1 A HIS 254 ? A HIS 253 25 1 Y 1 A HIS 255 ? A HIS 254 26 1 Y 1 A HIS 256 ? A HIS 255 27 1 Y 1 A HIS 257 ? A HIS 256 28 1 Y 1 A HIS 258 ? A HIS 257 29 1 Y 1 A HIS 259 ? A HIS 258 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CR2 N1 N N N 74 CR2 CA1 C N N 75 CR2 C1 C N N 76 CR2 N2 N N N 77 CR2 N3 N N N 78 CR2 C2 C N N 79 CR2 O2 O N N 80 CR2 CA2 C N N 81 CR2 CA3 C N N 82 CR2 C3 C N N 83 CR2 O3 O N N 84 CR2 CB2 C N N 85 CR2 CG2 C Y N 86 CR2 CD1 C Y N 87 CR2 CD2 C Y N 88 CR2 CE1 C Y N 89 CR2 CE2 C Y N 90 CR2 CZ C Y N 91 CR2 OH O N N 92 CR2 OXT O N N 93 CR2 H H N N 94 CR2 H2 H N N 95 CR2 HA1 H N N 96 CR2 HA12 H N N 97 CR2 HA31 H N N 98 CR2 HA32 H N N 99 CR2 HB2 H N N 100 CR2 HD1 H N N 101 CR2 HD2 H N N 102 CR2 HE1 H N N 103 CR2 HE2 H N N 104 CR2 HOH H N N 105 CR2 HXT H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 EDO C1 C N N 121 EDO O1 O N N 122 EDO C2 C N N 123 EDO O2 O N N 124 EDO H11 H N N 125 EDO H12 H N N 126 EDO HO1 H N N 127 EDO H21 H N N 128 EDO H22 H N N 129 EDO HO2 H N N 130 FMT C C N N 131 FMT O1 O N N 132 FMT O2 O N N 133 FMT H H N N 134 FMT HO2 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 IOD I I N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CR2 O3 C3 doub N N 70 CR2 CA3 C3 sing N N 71 CR2 CA3 N3 sing N N 72 CR2 C3 OXT sing N N 73 CR2 N1 CA1 sing N N 74 CR2 O2 C2 doub N N 75 CR2 N3 C2 sing N N 76 CR2 N3 C1 sing N N 77 CR2 C2 CA2 sing N N 78 CR2 CA1 C1 sing N N 79 CR2 C1 N2 doub N N 80 CR2 CA2 N2 sing N N 81 CR2 CA2 CB2 doub N Z 82 CR2 CB2 CG2 sing N N 83 CR2 CG2 CD2 doub Y N 84 CR2 CG2 CD1 sing Y N 85 CR2 CD2 CE2 sing Y N 86 CR2 CD1 CE1 doub Y N 87 CR2 CE2 CZ doub Y N 88 CR2 CE1 CZ sing Y N 89 CR2 CZ OH sing N N 90 CR2 N1 H sing N N 91 CR2 N1 H2 sing N N 92 CR2 CA1 HA1 sing N N 93 CR2 CA1 HA12 sing N N 94 CR2 CA3 HA31 sing N N 95 CR2 CA3 HA32 sing N N 96 CR2 CB2 HB2 sing N N 97 CR2 CD1 HD1 sing N N 98 CR2 CD2 HD2 sing N N 99 CR2 CE1 HE1 sing N N 100 CR2 CE2 HE2 sing N N 101 CR2 OH HOH sing N N 102 CR2 OXT HXT sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 EDO C1 O1 sing N N 117 EDO C1 C2 sing N N 118 EDO C1 H11 sing N N 119 EDO C1 H12 sing N N 120 EDO O1 HO1 sing N N 121 EDO C2 O2 sing N N 122 EDO C2 H21 sing N N 123 EDO C2 H22 sing N N 124 EDO O2 HO2 sing N N 125 FMT C O1 doub N N 126 FMT C O2 sing N N 127 FMT C H sing N N 128 FMT O2 HO2 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MET N CA sing N N 265 MET N H sing N N 266 MET N H2 sing N N 267 MET CA C sing N N 268 MET CA CB sing N N 269 MET CA HA sing N N 270 MET C O doub N N 271 MET C OXT sing N N 272 MET CB CG sing N N 273 MET CB HB2 sing N N 274 MET CB HB3 sing N N 275 MET CG SD sing N N 276 MET CG HG2 sing N N 277 MET CG HG3 sing N N 278 MET SD CE sing N N 279 MET CE HE1 sing N N 280 MET CE HE2 sing N N 281 MET CE HE3 sing N N 282 MET OXT HXT sing N N 283 PHE N CA sing N N 284 PHE N H sing N N 285 PHE N H2 sing N N 286 PHE CA C sing N N 287 PHE CA CB sing N N 288 PHE CA HA sing N N 289 PHE C O doub N N 290 PHE C OXT sing N N 291 PHE CB CG sing N N 292 PHE CB HB2 sing N N 293 PHE CB HB3 sing N N 294 PHE CG CD1 doub Y N 295 PHE CG CD2 sing Y N 296 PHE CD1 CE1 sing Y N 297 PHE CD1 HD1 sing N N 298 PHE CD2 CE2 doub Y N 299 PHE CD2 HD2 sing N N 300 PHE CE1 CZ doub Y N 301 PHE CE1 HE1 sing N N 302 PHE CE2 CZ sing Y N 303 PHE CE2 HE2 sing N N 304 PHE CZ HZ sing N N 305 PHE OXT HXT sing N N 306 PRO N CA sing N N 307 PRO N CD sing N N 308 PRO N H sing N N 309 PRO CA C sing N N 310 PRO CA CB sing N N 311 PRO CA HA sing N N 312 PRO C O doub N N 313 PRO C OXT sing N N 314 PRO CB CG sing N N 315 PRO CB HB2 sing N N 316 PRO CB HB3 sing N N 317 PRO CG CD sing N N 318 PRO CG HG2 sing N N 319 PRO CG HG3 sing N N 320 PRO CD HD2 sing N N 321 PRO CD HD3 sing N N 322 PRO OXT HXT sing N N 323 SER N CA sing N N 324 SER N H sing N N 325 SER N H2 sing N N 326 SER CA C sing N N 327 SER CA CB sing N N 328 SER CA HA sing N N 329 SER C O doub N N 330 SER C OXT sing N N 331 SER CB OG sing N N 332 SER CB HB2 sing N N 333 SER CB HB3 sing N N 334 SER OG HG sing N N 335 SER OXT HXT sing N N 336 THR N CA sing N N 337 THR N H sing N N 338 THR N H2 sing N N 339 THR CA C sing N N 340 THR CA CB sing N N 341 THR CA HA sing N N 342 THR C O doub N N 343 THR C OXT sing N N 344 THR CB OG1 sing N N 345 THR CB CG2 sing N N 346 THR CB HB sing N N 347 THR OG1 HG1 sing N N 348 THR CG2 HG21 sing N N 349 THR CG2 HG22 sing N N 350 THR CG2 HG23 sing N N 351 THR OXT HXT sing N N 352 TRP N CA sing N N 353 TRP N H sing N N 354 TRP N H2 sing N N 355 TRP CA C sing N N 356 TRP CA CB sing N N 357 TRP CA HA sing N N 358 TRP C O doub N N 359 TRP C OXT sing N N 360 TRP CB CG sing N N 361 TRP CB HB2 sing N N 362 TRP CB HB3 sing N N 363 TRP CG CD1 doub Y N 364 TRP CG CD2 sing Y N 365 TRP CD1 NE1 sing Y N 366 TRP CD1 HD1 sing N N 367 TRP CD2 CE2 doub Y N 368 TRP CD2 CE3 sing Y N 369 TRP NE1 CE2 sing Y N 370 TRP NE1 HE1 sing N N 371 TRP CE2 CZ2 sing Y N 372 TRP CE3 CZ3 doub Y N 373 TRP CE3 HE3 sing N N 374 TRP CZ2 CH2 doub Y N 375 TRP CZ2 HZ2 sing N N 376 TRP CZ3 CH2 sing Y N 377 TRP CZ3 HZ3 sing N N 378 TRP CH2 HH2 sing N N 379 TRP OXT HXT sing N N 380 TYR N CA sing N N 381 TYR N H sing N N 382 TYR N H2 sing N N 383 TYR CA C sing N N 384 TYR CA CB sing N N 385 TYR CA HA sing N N 386 TYR C O doub N N 387 TYR C OXT sing N N 388 TYR CB CG sing N N 389 TYR CB HB2 sing N N 390 TYR CB HB3 sing N N 391 TYR CG CD1 doub Y N 392 TYR CG CD2 sing Y N 393 TYR CD1 CE1 sing Y N 394 TYR CD1 HD1 sing N N 395 TYR CD2 CE2 doub Y N 396 TYR CD2 HD2 sing N N 397 TYR CE1 CZ doub Y N 398 TYR CE1 HE1 sing N N 399 TYR CE2 CZ sing Y N 400 TYR CE2 HE2 sing N N 401 TYR CZ OH sing N N 402 TYR OH HH sing N N 403 TYR OXT HXT sing N N 404 VAL N CA sing N N 405 VAL N H sing N N 406 VAL N H2 sing N N 407 VAL CA C sing N N 408 VAL CA CB sing N N 409 VAL CA HA sing N N 410 VAL C O doub N N 411 VAL C OXT sing N N 412 VAL CB CG1 sing N N 413 VAL CB CG2 sing N N 414 VAL CB HB sing N N 415 VAL CG1 HG11 sing N N 416 VAL CG1 HG12 sing N N 417 VAL CG1 HG13 sing N N 418 VAL CG2 HG21 sing N N 419 VAL CG2 HG22 sing N N 420 VAL CG2 HG23 sing N N 421 VAL OXT HXT sing N N 422 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'IODIDE ION' IOD 4 'FORMIC ACID' FMT 5 water HOH #