HEADER VIRAL PROTEIN, HYDROLASE/INHIBITOR 12-JUL-11 3SV7 TITLE CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH TITLE 2 TELAPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE, NS4A PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NS4A (UNP RESIDUES 1674-1688), NS3 (UNP RESIDUES 1027- COMPND 5 1208); COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 3 ORGANISM_TAXID: 31646; SOURCE 4 STRAIN: SUBTYPE 1A, BID-V318; SOURCE 5 GENE: NS3-NS4A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS NS3, DRUG RESISTANCE, DRUG DESIGN, PROTEASE INHIBITORS, HCV, SERINE KEYWDS 2 PROTEASE, HYDROLASE, VIRAL PROTEIN, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.A.SCHIFFER,K.P.ROMANO REVDAT 4 30-OCT-24 3SV7 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3SV7 1 REMARK REVDAT 2 23-AUG-17 3SV7 1 SOURCE REMARK REVDAT 1 05-SEP-12 3SV7 0 JRNL AUTH K.P.ROMANO,A.ALI,C.AYDIN,D.SOUMANA,A.OZEN,L.M.DEVEAU, JRNL AUTH 2 C.SILVER,H.CAO,A.NEWTON,C.J.PETROPOULOS,W.HUANG,C.A.SCHIFFER JRNL TITL THE MOLECULAR BASIS OF DRUG RESISTANCE AGAINST HEPATITIS C JRNL TITL 2 VIRUS NS3/4A PROTEASE INHIBITORS. JRNL REF PLOS PATHOG. V. 8 02832 2012 JRNL REFN ISSN 1553-7366 JRNL PMID 22910833 JRNL DOI 10.1371/JOURNAL.PPAT.1002832 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 28901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1473 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1947 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 154 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.28000 REMARK 3 B22 (A**2) : -1.27000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.870 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1541 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1004 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2112 ; 1.303 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2407 ; 0.845 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 208 ; 6.138 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 49 ;34.093 ;22.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 222 ;13.243 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.579 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 252 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1730 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 295 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1010 ; 0.661 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 419 ; 0.167 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1624 ; 1.239 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 531 ; 1.884 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 481 ; 3.125 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 982 A 991 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1075 -19.9616 -0.0411 REMARK 3 T TENSOR REMARK 3 T11: 0.4130 T22: 0.1586 REMARK 3 T33: 0.1619 T12: -0.0253 REMARK 3 T13: 0.1713 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: -0.2120 L22: 2.5754 REMARK 3 L33: 5.5793 L12: -2.2949 REMARK 3 L13: -0.9855 L23: 4.3664 REMARK 3 S TENSOR REMARK 3 S11: 0.1426 S12: 0.0492 S13: 0.0610 REMARK 3 S21: -0.3042 S22: -0.1654 S23: -0.0270 REMARK 3 S31: -0.1135 S32: 0.0604 S33: 0.0227 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 992 A 1004 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2133 1.3553 23.3617 REMARK 3 T TENSOR REMARK 3 T11: 0.1298 T22: 0.1025 REMARK 3 T33: 0.1051 T12: -0.0300 REMARK 3 T13: 0.0219 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.9651 L22: 2.5188 REMARK 3 L33: 1.3796 L12: 0.5691 REMARK 3 L13: 0.8292 L23: -1.0748 REMARK 3 S TENSOR REMARK 3 S11: 0.0628 S12: -0.1350 S13: 0.0488 REMARK 3 S21: 0.3547 S22: -0.0698 S23: 0.0102 REMARK 3 S31: -0.2983 S32: 0.0896 S33: 0.0070 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1005 A 1012 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2326 4.5915 18.7989 REMARK 3 T TENSOR REMARK 3 T11: 0.1010 T22: 0.0784 REMARK 3 T33: 0.0968 T12: -0.0150 REMARK 3 T13: 0.0007 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 4.0386 L22: 3.4587 REMARK 3 L33: 6.2406 L12: -0.7585 REMARK 3 L13: -4.0159 L23: 0.9564 REMARK 3 S TENSOR REMARK 3 S11: 0.0521 S12: -0.1057 S13: 0.0121 REMARK 3 S21: 0.0917 S22: -0.0781 S23: 0.0156 REMARK 3 S31: 0.0149 S32: 0.1243 S33: 0.0260 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1013 A 1025 REMARK 3 ORIGIN FOR THE GROUP (A): 10.5391 -5.7527 9.0185 REMARK 3 T TENSOR REMARK 3 T11: 0.1017 T22: 0.0871 REMARK 3 T33: 0.1085 T12: 0.0106 REMARK 3 T13: 0.0725 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 3.9694 L22: 6.5752 REMARK 3 L33: 7.3340 L12: -3.4660 REMARK 3 L13: 1.7096 L23: -2.2596 REMARK 3 S TENSOR REMARK 3 S11: 0.1440 S12: 0.2117 S13: 0.0583 REMARK 3 S21: -0.5835 S22: -0.2880 S23: -0.3383 REMARK 3 S31: -0.1365 S32: 0.2542 S33: 0.1440 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1026 A 1031 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7994 -2.2939 22.0814 REMARK 3 T TENSOR REMARK 3 T11: 0.0690 T22: 0.1284 REMARK 3 T33: 0.1644 T12: -0.0640 REMARK 3 T13: -0.0263 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 15.9696 L22: 1.2219 REMARK 3 L33: 15.3846 L12: -0.4392 REMARK 3 L13: -13.0010 L23: 2.9060 REMARK 3 S TENSOR REMARK 3 S11: -0.0702 S12: -0.3601 S13: -0.1245 REMARK 3 S21: -0.0738 S22: 0.1730 S23: -0.1894 REMARK 3 S31: -0.3374 S32: 0.7219 S33: -0.1027 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1032 A 1041 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0240 -4.9837 16.0526 REMARK 3 T TENSOR REMARK 3 T11: 0.0640 T22: 0.1096 REMARK 3 T33: 0.0860 T12: 0.0091 REMARK 3 T13: 0.0007 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.2566 L22: 3.8566 REMARK 3 L33: 4.6449 L12: -0.1628 REMARK 3 L13: -0.3860 L23: 0.5109 REMARK 3 S TENSOR REMARK 3 S11: 0.1631 S12: 0.0894 S13: -0.0490 REMARK 3 S21: -0.1821 S22: -0.0928 S23: -0.0838 REMARK 3 S31: -0.0968 S32: -0.0165 S33: -0.0703 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1042 A 1061 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1737 -11.6209 20.9176 REMARK 3 T TENSOR REMARK 3 T11: 0.0904 T22: 0.1021 REMARK 3 T33: 0.1000 T12: 0.0060 REMARK 3 T13: -0.0010 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.0420 L22: 0.5400 REMARK 3 L33: 0.1880 L12: -0.3714 REMARK 3 L13: -0.3708 L23: -0.0516 REMARK 3 S TENSOR REMARK 3 S11: 0.0193 S12: 0.0648 S13: -0.0438 REMARK 3 S21: 0.0247 S22: -0.0250 S23: -0.0487 REMARK 3 S31: -0.0265 S32: -0.0020 S33: 0.0057 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1062 A 1076 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2458 -16.0192 18.0941 REMARK 3 T TENSOR REMARK 3 T11: 0.0606 T22: 0.1048 REMARK 3 T33: 0.1293 T12: 0.0172 REMARK 3 T13: 0.0036 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.3243 L22: 1.6926 REMARK 3 L33: 1.0621 L12: 1.1856 REMARK 3 L13: -1.0016 L23: -0.8553 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: -0.1101 S13: -0.0841 REMARK 3 S21: -0.0401 S22: -0.1369 S23: -0.1473 REMARK 3 S31: 0.1248 S32: 0.1598 S33: 0.0642 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1077 A 1087 REMARK 3 ORIGIN FOR THE GROUP (A): -3.0695 -17.7964 21.1973 REMARK 3 T TENSOR REMARK 3 T11: 0.0716 T22: 0.1117 REMARK 3 T33: 0.1196 T12: 0.0106 REMARK 3 T13: 0.0055 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: -0.2841 L22: 1.9404 REMARK 3 L33: 1.4341 L12: 0.3440 REMARK 3 L13: -0.2725 L23: 0.5047 REMARK 3 S TENSOR REMARK 3 S11: 0.0442 S12: 0.0639 S13: -0.0442 REMARK 3 S21: 0.0806 S22: -0.0654 S23: -0.0270 REMARK 3 S31: 0.0672 S32: -0.0353 S33: 0.0212 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1088 A 1097 REMARK 3 ORIGIN FOR THE GROUP (A): 2.9738 -7.9852 31.5713 REMARK 3 T TENSOR REMARK 3 T11: 0.0624 T22: 0.1256 REMARK 3 T33: 0.0690 T12: -0.0144 REMARK 3 T13: -0.0205 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 10.9454 L22: 1.5355 REMARK 3 L33: 3.4933 L12: 1.5596 REMARK 3 L13: -4.8814 L23: -0.7641 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: -0.5552 S13: -0.0054 REMARK 3 S21: 0.0812 S22: -0.1113 S23: -0.1460 REMARK 3 S31: -0.1673 S32: 0.3164 S33: 0.0810 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1098 A 1108 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0827 -3.1935 33.0656 REMARK 3 T TENSOR REMARK 3 T11: 0.0760 T22: 0.1197 REMARK 3 T33: 0.1186 T12: -0.0081 REMARK 3 T13: 0.0278 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 1.5251 L22: 0.0613 REMARK 3 L33: 4.5024 L12: 0.1088 REMARK 3 L13: -0.7359 L23: -0.6399 REMARK 3 S TENSOR REMARK 3 S11: 0.1179 S12: -0.2368 S13: 0.2468 REMARK 3 S21: -0.0210 S22: -0.0596 S23: 0.0670 REMARK 3 S31: 0.0152 S32: 0.0743 S33: -0.0583 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1109 A 1114 REMARK 3 ORIGIN FOR THE GROUP (A): -8.3846 3.9366 21.6828 REMARK 3 T TENSOR REMARK 3 T11: 0.1190 T22: 0.0578 REMARK 3 T33: 0.1574 T12: -0.0048 REMARK 3 T13: 0.0318 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 11.8023 L22: 3.5943 REMARK 3 L33: 14.2226 L12: 3.7541 REMARK 3 L13: -6.0430 L23: -5.5730 REMARK 3 S TENSOR REMARK 3 S11: 0.1401 S12: 0.2004 S13: 0.4986 REMARK 3 S21: -0.1186 S22: 0.1549 S23: 0.4083 REMARK 3 S31: -0.3181 S32: 0.0159 S33: -0.2949 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1115 A 1120 REMARK 3 ORIGIN FOR THE GROUP (A): -20.2368 -4.7758 31.1177 REMARK 3 T TENSOR REMARK 3 T11: 0.0733 T22: 0.1151 REMARK 3 T33: 0.1165 T12: -0.0017 REMARK 3 T13: 0.0265 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 3.5942 L22: 3.0688 REMARK 3 L33: 0.8820 L12: 1.1411 REMARK 3 L13: -1.4381 L23: -0.5001 REMARK 3 S TENSOR REMARK 3 S11: 0.1274 S12: -0.0274 S13: 0.2174 REMARK 3 S21: 0.1313 S22: 0.0001 S23: -0.0027 REMARK 3 S31: -0.0682 S32: -0.0427 S33: -0.1275 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1121 A 1129 REMARK 3 ORIGIN FOR THE GROUP (A): -20.6998 -4.3312 25.9313 REMARK 3 T TENSOR REMARK 3 T11: 0.0979 T22: 0.1439 REMARK 3 T33: 0.1109 T12: 0.0133 REMARK 3 T13: 0.0273 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.4240 L22: 5.7439 REMARK 3 L33: 3.9381 L12: -1.0792 REMARK 3 L13: 0.1364 L23: -3.7564 REMARK 3 S TENSOR REMARK 3 S11: 0.0662 S12: 0.0666 S13: -0.0172 REMARK 3 S21: -0.3364 S22: 0.1222 S23: 0.1077 REMARK 3 S31: -0.1286 S32: -0.2188 S33: -0.1884 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1130 A 1135 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0703 2.9916 16.5877 REMARK 3 T TENSOR REMARK 3 T11: 0.0824 T22: 0.1203 REMARK 3 T33: 0.0817 T12: 0.0459 REMARK 3 T13: 0.0373 T23: 0.0580 REMARK 3 L TENSOR REMARK 3 L11: 11.9108 L22: 20.0663 REMARK 3 L33: 3.7144 L12: -6.0121 REMARK 3 L13: 1.3170 L23: -2.8592 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: -0.1548 S13: 0.4906 REMARK 3 S21: 0.3130 S22: 0.0980 S23: -0.1483 REMARK 3 S31: -0.0429 S32: -0.2471 S33: -0.0759 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1136 A 1142 REMARK 3 ORIGIN FOR THE GROUP (A): -8.3230 -4.0431 19.0725 REMARK 3 T TENSOR REMARK 3 T11: 0.0685 T22: 0.1156 REMARK 3 T33: 0.1042 T12: 0.0029 REMARK 3 T13: 0.0087 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 2.8833 L22: 3.5992 REMARK 3 L33: 7.6573 L12: -2.3270 REMARK 3 L13: -0.0116 L23: -0.7552 REMARK 3 S TENSOR REMARK 3 S11: 0.1646 S12: 0.1400 S13: -0.0010 REMARK 3 S21: -0.1532 S22: -0.1511 S23: 0.0459 REMARK 3 S31: -0.1113 S32: -0.0552 S33: -0.0135 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1143 A 1149 REMARK 3 ORIGIN FOR THE GROUP (A): -8.8986 -3.4509 35.0579 REMARK 3 T TENSOR REMARK 3 T11: 0.0478 T22: 0.1358 REMARK 3 T33: 0.1381 T12: -0.0141 REMARK 3 T13: 0.0297 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 4.6972 L22: 5.4976 REMARK 3 L33: 15.4754 L12: -1.9580 REMARK 3 L13: -3.8672 L23: 4.2967 REMARK 3 S TENSOR REMARK 3 S11: 0.2259 S12: -0.3694 S13: 0.3906 REMARK 3 S21: -0.0071 S22: 0.1417 S23: -0.1395 REMARK 3 S31: -0.0517 S32: 0.0910 S33: -0.3677 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1150 A 1158 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8973 -8.5937 23.5366 REMARK 3 T TENSOR REMARK 3 T11: 0.0875 T22: 0.1087 REMARK 3 T33: 0.1048 T12: -0.0069 REMARK 3 T13: 0.0070 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 5.4690 L22: 0.4936 REMARK 3 L33: 7.7403 L12: -1.8619 REMARK 3 L13: 3.5608 L23: -0.5669 REMARK 3 S TENSOR REMARK 3 S11: 0.1130 S12: 0.1696 S13: 0.0123 REMARK 3 S21: -0.0397 S22: -0.1515 S23: 0.0394 REMARK 3 S31: 0.0595 S32: 0.0947 S33: 0.0385 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1159 A 1167 REMARK 3 ORIGIN FOR THE GROUP (A): -22.8968 -2.5998 17.1189 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.2421 REMARK 3 T33: 0.1884 T12: 0.0346 REMARK 3 T13: -0.0016 T23: 0.0961 REMARK 3 L TENSOR REMARK 3 L11: 2.5917 L22: 3.1288 REMARK 3 L33: 6.6080 L12: 0.3482 REMARK 3 L13: -4.6430 L23: -3.9580 REMARK 3 S TENSOR REMARK 3 S11: 0.1527 S12: 0.4416 S13: 0.0076 REMARK 3 S21: 0.1857 S22: 0.3636 S23: 0.5779 REMARK 3 S31: -0.0094 S32: -0.5944 S33: -0.5162 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1168 A 1179 REMARK 3 ORIGIN FOR THE GROUP (A): -8.9537 -16.0993 29.3833 REMARK 3 T TENSOR REMARK 3 T11: 0.1079 T22: 0.0852 REMARK 3 T33: 0.1209 T12: -0.0158 REMARK 3 T13: -0.0018 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 7.4420 L22: 4.7221 REMARK 3 L33: 2.8351 L12: -5.2482 REMARK 3 L13: 0.7317 L23: -2.6657 REMARK 3 S TENSOR REMARK 3 S11: -0.0312 S12: -0.1621 S13: -0.3232 REMARK 3 S21: -0.0366 S22: 0.0685 S23: 0.2588 REMARK 3 S31: 0.1899 S32: -0.0226 S33: -0.0373 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3SV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000066692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.46200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG 3350, 0.1M MES (PH 6.5), 4% REMARK 280 AMMONIUM SULFATE, HANGING DROP, VAPOR DIFFUSION, TEMPERATURE REMARK 280 295K, PH 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.64250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.19500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.41150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.19500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.64250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.41150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1181 REMARK 465 PRO A 1182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 987 CG CD CE NZ REMARK 470 LYS A 988 CG CD CE NZ REMARK 470 ASP A1003 CG OD1 OD2 REMARK 470 GLU A1013 CG CD OE1 OE2 REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 GLN A1017 CG CD OE1 NE2 REMARK 470 GLU A1018 CG CD OE1 OE2 REMARK 470 ARG A1024 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1026 CG CD CE NZ REMARK 470 GLN A1028 CG CD OE1 NE2 REMARK 470 ARG A1092 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1165 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1038 -169.13 -101.06 REMARK 500 PHE A1043 -158.98 -153.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 TELAPREVIR IS A LINEAR, PEPTIDOMIMETIC HCV NS3/4A PROTEASE REMARK 600 INHIBITOR FROM VERTEX. TELAPREVIR WAS FDA APPROVED FOR CLINICAL USE REMARK 600 IN HUMANS. THE DRUG MIMICS THE PEPTIDE BACKBONE OF PROTEINS, REMARK 600 ALTHOUGH THE DRUG MOIETIES CANNOT BE SEQUENCED USING AMINO ACID REMARK 600 NOMENCLATURE REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 3 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 145 O REMARK 620 2 CYS A1097 SG 110.8 REMARK 620 3 CYS A1099 SG 106.7 93.9 REMARK 620 4 CYS A1145 SG 117.2 112.5 113.3 REMARK 620 N 1 2 3 REMARK 630 REMARK 630 MOLECULE TYPE: NULL REMARK 630 MOLECULE NAME: (1S,3AR,6AS)-2-[(2S)-2-({(2S)-2-CYCLOHEXYL-2- REMARK 630 [(PYRAZIN-2-YLCARBONYL)AMINO]ACETYL}AMINO)-3,3-DIMETHYLBUTANOYL]-N- REMARK 630 [(2R,3S)-1-(CYCLOPROPYLAMINO)-2-HYDROXY-1-OXOHEXAN-3-YL] REMARK 630 OCTAHYDROCYCLOPENTA[C]PYRROLE-1-CARBOXAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 SV6 A 1 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: VGL CHG TBG 037 03A REMARK 630 DETAILS: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SV6 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SU3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH VANIPREVIR REMARK 900 RELATED ID: 3SU4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SU5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SU6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SUD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH MK-5172 REMARK 900 RELATED ID: 3SUE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SUF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SUG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SV6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH TELAPREVIR REMARK 900 RELATED ID: 3SV8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 900 RELATED ID: 3SV9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE COFACTOR 4A RESIDUES 986-1000 (MET LYS LYS LYS GLY SER VAL VAL REMARK 999 ILE VAL GLY ARG ILE ASN LEU) IN THIS ENTRY CORRESPOND TO RESIDUES REMARK 999 NUMBERING 1674-1688 OF DATABASE SEQUENCE REFERENCE (UNP A8DG50). REMARK 999 THIS PEPTIDE IS COVALENTLY LINKED TO THE N-TERMINUS OF NS3. C1679S REMARK 999 MUTATION WAS ENGINEERED TO PREVENT DISULFIDE FORMATION. THE V1686I REMARK 999 AND I1687N WERE ENGINEERED TO OPTIMIZE THE LINKER BETWEEN THE REMARK 999 COFACTOR 4A AND NS3. DBREF 3SV7 A 986 1000 UNP A8DG50 A8DG50_9HEPC 1674 1688 DBREF 3SV7 A 1001 1182 UNP A8DG50 A8DG50_9HEPC 1027 1208 SEQADV 3SV7 GLY A 980 UNP A8DG50 EXPRESSION TAG SEQADV 3SV7 SER A 981 UNP A8DG50 EXPRESSION TAG SEQADV 3SV7 HIS A 982 UNP A8DG50 EXPRESSION TAG SEQADV 3SV7 MET A 983 UNP A8DG50 EXPRESSION TAG SEQADV 3SV7 ALA A 984 UNP A8DG50 EXPRESSION TAG SEQADV 3SV7 SER A 985 UNP A8DG50 EXPRESSION TAG SEQADV 3SV7 MET A 986 UNP A8DG50 CYS 1674 ENGINEERED MUTATION SEQADV 3SV7 LYS A 987 UNP A8DG50 LEU 1675 ENGINEERED MUTATION SEQADV 3SV7 LYS A 988 UNP A8DG50 SER 1676 ENGINEERED MUTATION SEQADV 3SV7 LYS A 989 UNP A8DG50 THR 1677 ENGINEERED MUTATION SEQADV 3SV7 SER A 991 UNP A8DG50 CYS 1679 SEE REMARK 999 SEQADV 3SV7 ILE A 998 UNP A8DG50 VAL 1686 SEE REMARK 999 SEQADV 3SV7 ASN A 999 UNP A8DG50 ILE 1687 SEE REMARK 999 SEQADV 3SV7 SER A 1001 UNP A8DG50 ALA 1027 ENGINEERED MUTATION SEQADV 3SV7 GLY A 1002 UNP A8DG50 PRO 1028 ENGINEERED MUTATION SEQADV 3SV7 ASP A 1003 UNP A8DG50 ILE 1029 ENGINEERED MUTATION SEQADV 3SV7 GLU A 1013 UNP A8DG50 LEU 1039 ENGINEERED MUTATION SEQADV 3SV7 GLU A 1014 UNP A8DG50 LEU 1040 ENGINEERED MUTATION SEQADV 3SV7 GLN A 1017 UNP A8DG50 ILE 1043 ENGINEERED MUTATION SEQADV 3SV7 GLU A 1018 UNP A8DG50 ILE 1044 ENGINEERED MUTATION SEQADV 3SV7 GLN A 1021 UNP A8DG50 LEU 1047 ENGINEERED MUTATION SEQADV 3SV7 THR A 1040 UNP A8DG50 ALA 1066 ENGINEERED MUTATION SEQADV 3SV7 SER A 1047 UNP A8DG50 CYS 1073 ENGINEERED MUTATION SEQADV 3SV7 LEU A 1052 UNP A8DG50 CYS 1078 ENGINEERED MUTATION SEQADV 3SV7 THR A 1072 UNP A8DG50 ILE 1098 ENGINEERED MUTATION SEQADV 3SV7 GLN A 1086 UNP A8DG50 PRO 1112 ENGINEERED MUTATION SEQADV 3SV7 LYS A 1155 UNP A8DG50 ARG 1181 ENGINEERED MUTATION SEQADV 3SV7 SER A 1159 UNP A8DG50 CYS 1185 ENGINEERED MUTATION SEQRES 1 A 203 GLY SER HIS MET ALA SER MET LYS LYS LYS GLY SER VAL SEQRES 2 A 203 VAL ILE VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA SEQRES 3 A 203 TYR ALA GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU SEQRES 4 A 203 THR SER GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY SEQRES 5 A 203 GLU VAL GLN ILE VAL SER THR ALA THR GLN THR PHE LEU SEQRES 6 A 203 ALA THR SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS SEQRES 7 A 203 GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO SEQRES 8 A 203 VAL THR GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL SEQRES 9 A 203 GLY TRP GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO SEQRES 10 A 203 CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 203 HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER SEQRES 12 A 203 ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER TYR LEU SEQRES 13 A 203 LYS GLY SER SER GLY GLY PRO LEU LEU CYS PRO ALA GLY SEQRES 14 A 203 HIS ALA VAL GLY ILE PHE LYS ALA ALA VAL SER THR ARG SEQRES 15 A 203 GLY VAL ALA LYS ALA VAL ASP PHE ILE PRO VAL GLU SER SEQRES 16 A 203 LEU GLU THR THR MET ARG SER PRO HET SV6 A 1 49 HET SO4 A 2 5 HET ZN A 3 1 HETNAM SV6 (1S,3AR,6AS)-2-[(2S)-2-({(2S)-2-CYCLOHEXYL-2-[(PYRAZIN- HETNAM 2 SV6 2-YLCARBONYL)AMINO]ACETYL}AMINO)-3,3- HETNAM 3 SV6 DIMETHYLBUTANOYL]-N-[(2R,3S)-1-(CYCLOPROPYLAMINO)-2- HETNAM 4 SV6 HYDROXY-1-OXOHEXAN-3-YL]OCTAHYDROCYCLOPENTA[C]PYRROLE- HETNAM 5 SV6 1-CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETSYN SV6 TELAPREVIR, BOUND FORM FORMUL 2 SV6 C36 H55 N7 O6 FORMUL 3 SO4 O4 S 2- FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *154(H2 O) HELIX 1 1 HIS A 982 MET A 986 5 5 HELIX 2 2 GLY A 1012 GLY A 1023 1 12 HELIX 3 3 TYR A 1056 GLY A 1060 1 5 HELIX 4 4 SER A 1133 LYS A 1136 5 4 HELIX 5 5 VAL A 1172 ARG A 1180 1 9 SHEET 1 A 7 TYR A1006 GLN A1009 0 SHEET 2 A 7 VAL A 993 ASN A 999 -1 N ASN A 999 O TYR A1006 SHEET 3 A 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 A 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 A 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 A 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 A 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 B 7 ASP A1103 VAL A1107 0 SHEET 2 B 7 VAL A1113 ARG A1118 -1 O ILE A1114 N LEU A1106 SHEET 3 B 7 ARG A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 B 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 B 7 ALA A1150 THR A1160 -1 N ALA A1156 O ASP A1168 SHEET 6 B 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 B 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK CAI SV6 A 1 OG SER A1139 1555 1555 1.60 LINK ZN ZN A 3 O HOH A 145 1555 1555 2.22 LINK ZN ZN A 3 SG CYS A1097 1555 1555 2.27 LINK ZN ZN A 3 SG CYS A1099 1555 1555 2.49 LINK ZN ZN A 3 SG CYS A1145 1555 1555 2.30 SITE 1 AC1 15 HOH A 115 HOH A 153 HIS A 982 GLN A1041 SITE 2 AC1 15 THR A1042 HIS A1057 LEU A1135 GLY A1137 SITE 3 AC1 15 SER A1138 SER A1139 LYS A1155 ALA A1156 SITE 4 AC1 15 ALA A1157 SER A1159 ASP A1168 SITE 1 AC2 6 HOH A 22 HOH A 23 HOH A 66 TYR A1006 SITE 2 AC2 6 GLN A1008 TYR A1056 SITE 1 AC3 5 HOH A 145 CYS A1097 CYS A1099 CYS A1145 SITE 2 AC3 5 HIS A1149 CRYST1 55.285 58.823 60.390 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018088 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016559 0.00000