HEADER TRANSFERASE 15-JUL-11 3SXO TITLE MYCOBACTERIUM TUBERCULOSIS EIS PROTEIN INITIATES MODULATION OF HOST TITLE 2 IMMUNE RESPONSES BY ACETYLATION OF DUSP16/MKP-7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENHANCED INTRACELLULAR SURVIVAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: EIS, MT2489, MTCY253.04, RV2416C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-28B(+) KEYWDS GNAT FOLD, ACETYLTRANSFERASE, ACETYL COA BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.H.KIM,D.R.AN,J.Y.YOON,H.S.KIM,H.J.YOON,J.S.SONG,H.N.IM,J.KIM, AUTHOR 2 D.J.KIM,S.J.LEE,H.J.KIM,J.Y.LEE,S.W.SUH REVDAT 2 20-MAR-24 3SXO 1 SEQADV REVDAT 1 25-JUL-12 3SXO 0 JRNL AUTH K.H.KIM,D.R.AN,J.Y.YOON,H.S.KIM,H.J.YOON,J.S.SONG,H.N.IM, JRNL AUTH 2 J.KIM,D.J.KIM,S.J.LEE,H.J.KIM,J.Y.LEE,S.W.SUH JRNL TITL MYCOBACTERIUM TUBERCULOSIS EIS PROTEIN INITIATES MODULATION JRNL TITL 2 OF HOST IMMUNE RESPONSES BY ACETYLATION OF DUSP16/MKP-7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 48092 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8419 - 6.3612 1.00 2695 131 0.1940 0.2198 REMARK 3 2 6.3612 - 5.0769 1.00 2681 154 0.2147 0.2323 REMARK 3 3 5.0769 - 4.4434 1.00 2696 141 0.1476 0.2021 REMARK 3 4 4.4434 - 4.0409 1.00 2691 132 0.1542 0.1742 REMARK 3 5 4.0409 - 3.7533 1.00 2707 130 0.1564 0.1717 REMARK 3 6 3.7533 - 3.5333 1.00 2707 132 0.1611 0.2043 REMARK 3 7 3.5333 - 3.3573 1.00 2678 156 0.1570 0.1882 REMARK 3 8 3.3573 - 3.2118 1.00 2650 156 0.1675 0.2129 REMARK 3 9 3.2118 - 3.0886 1.00 2711 147 0.1718 0.2232 REMARK 3 10 3.0886 - 2.9824 1.00 2680 146 0.1677 0.2364 REMARK 3 11 2.9824 - 2.8894 1.00 2686 133 0.1763 0.2184 REMARK 3 12 2.8894 - 2.8071 1.00 2678 159 0.1973 0.2537 REMARK 3 13 2.8071 - 2.7334 1.00 2669 153 0.1883 0.2723 REMARK 3 14 2.7334 - 2.6668 1.00 2672 141 0.1814 0.2221 REMARK 3 15 2.6668 - 2.6063 1.00 2663 140 0.1932 0.2624 REMARK 3 16 2.6063 - 2.5510 1.00 2719 150 0.2223 0.2680 REMARK 3 17 2.5510 - 2.5001 1.00 2660 148 0.2416 0.3331 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 46.94 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.680 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.33880 REMARK 3 B22 (A**2) : -6.33880 REMARK 3 B33 (A**2) : 12.67770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6244 REMARK 3 ANGLE : 1.092 8494 REMARK 3 CHIRALITY : 0.073 952 REMARK 3 PLANARITY : 0.004 1114 REMARK 3 DIHEDRAL : 13.652 2266 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SXO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000066780. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI PIN PHOTODIODE DETECTOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.460 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 3350, 300MM AMMONIUM CITRATE, REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 87.28700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 50.39517 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.94233 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 87.28700 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 50.39517 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.94233 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 87.28700 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 50.39517 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.94233 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 100.79035 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 81.88467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 100.79035 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 81.88467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 100.79035 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 81.88467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 90770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLN A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 SER A 6 REMARK 465 VAL A 7 REMARK 465 GLY A 162 REMARK 465 GLY A 163 REMARK 465 LEU A 164 REMARK 465 GLY A 165 REMARK 465 GLY A 166 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLN B 3 REMARK 465 SER B 4 REMARK 465 ASP B 5 REMARK 465 SER B 6 REMARK 465 VAL B 7 REMARK 465 GLY B 162 REMARK 465 GLY B 163 REMARK 465 LEU B 164 REMARK 465 GLY B 165 REMARK 465 GLY B 166 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 218 NH1 ARG A 233 1.94 REMARK 500 O HOH B 418 O HOH B 518 2.01 REMARK 500 O HOH A 532 O HOH A 545 2.03 REMARK 500 SG CYS A 210 O HOH A 415 2.06 REMARK 500 O HOH B 441 O HOH B 501 2.07 REMARK 500 O HOH B 539 O HOH B 548 2.10 REMARK 500 OG SER B 29 O HOH B 463 2.11 REMARK 500 NH1 ARG B 345 O HOH B 409 2.14 REMARK 500 O HOH A 429 O HOH A 567 2.14 REMARK 500 OG SER A 38 OE1 GLU A 205 2.16 REMARK 500 SG CYS B 210 O HOH B 505 2.17 REMARK 500 O HOH A 544 O HOH B 465 2.17 REMARK 500 O HOH A 502 O HOH A 506 2.17 REMARK 500 OG SER A 29 O HOH A 470 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO B 36 CD PRO B 36 N -0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 33 CB - CA - C ANGL. DEV. = 14.1 DEGREES REMARK 500 ALA A 405 CB - CA - C ANGL. DEV. = -10.4 DEGREES REMARK 500 ALA A 405 N - CA - C ANGL. DEV. = -29.3 DEGREES REMARK 500 PRO B 36 N - CA - CB ANGL. DEV. = -8.7 DEGREES REMARK 500 ALA B 405 N - CA - C ANGL. DEV. = -27.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 3.73 -65.78 REMARK 500 THR A 175 -9.38 -58.64 REMARK 500 TRP A 295 135.81 -176.46 REMARK 500 GLU A 319 38.60 -81.89 REMARK 500 ASP B 32 41.50 -79.37 REMARK 500 SER B 168 -54.00 68.54 REMARK 500 TRP B 295 136.85 178.08 REMARK 500 ALA B 405 -165.22 -106.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 405 PHE A 406 -141.35 REMARK 500 ALA B 405 PHE B 406 -146.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SXN RELATED DB: PDB DBREF 3SXO A 1 408 UNP P71727 EIS_MYCTU 1 408 DBREF 3SXO B 1 408 UNP P71727 EIS_MYCTU 1 408 SEQADV 3SXO MET A -19 UNP P71727 EXPRESSION TAG SEQADV 3SXO GLY A -18 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER A -17 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER A -16 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A -15 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A -14 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A -13 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A -12 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A -11 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A -10 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER A -9 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER A -8 UNP P71727 EXPRESSION TAG SEQADV 3SXO GLY A -7 UNP P71727 EXPRESSION TAG SEQADV 3SXO LEU A -6 UNP P71727 EXPRESSION TAG SEQADV 3SXO VAL A -5 UNP P71727 EXPRESSION TAG SEQADV 3SXO PRO A -4 UNP P71727 EXPRESSION TAG SEQADV 3SXO ARG A -3 UNP P71727 EXPRESSION TAG SEQADV 3SXO GLY A -2 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER A -1 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS A 0 UNP P71727 EXPRESSION TAG SEQADV 3SXO MET B -19 UNP P71727 EXPRESSION TAG SEQADV 3SXO GLY B -18 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER B -17 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER B -16 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B -15 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B -14 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B -13 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B -12 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B -11 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B -10 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER B -9 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER B -8 UNP P71727 EXPRESSION TAG SEQADV 3SXO GLY B -7 UNP P71727 EXPRESSION TAG SEQADV 3SXO LEU B -6 UNP P71727 EXPRESSION TAG SEQADV 3SXO VAL B -5 UNP P71727 EXPRESSION TAG SEQADV 3SXO PRO B -4 UNP P71727 EXPRESSION TAG SEQADV 3SXO ARG B -3 UNP P71727 EXPRESSION TAG SEQADV 3SXO GLY B -2 UNP P71727 EXPRESSION TAG SEQADV 3SXO SER B -1 UNP P71727 EXPRESSION TAG SEQADV 3SXO HIS B 0 UNP P71727 EXPRESSION TAG SEQRES 1 A 428 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 428 LEU VAL PRO ARG GLY SER HIS MET PRO GLN SER ASP SER SEQRES 3 A 428 VAL THR VAL THR LEU CYS SER PRO THR GLU ASP ASP TRP SEQRES 4 A 428 PRO GLY MET PHE LEU LEU ALA ALA ALA SER PHE THR ASP SEQRES 5 A 428 PHE ILE GLY PRO GLU SER ALA THR ALA TRP ARG THR LEU SEQRES 6 A 428 VAL PRO THR ASP GLY ALA VAL VAL VAL ARG ASP GLY ALA SEQRES 7 A 428 GLY PRO GLY SER GLU VAL VAL GLY MET ALA LEU TYR MET SEQRES 8 A 428 ASP LEU ARG LEU THR VAL PRO GLY GLU VAL VAL LEU PRO SEQRES 9 A 428 THR ALA GLY LEU SER PHE VAL ALA VAL ALA PRO THR HIS SEQRES 10 A 428 ARG ARG ARG GLY LEU LEU ARG ALA MET CYS ALA GLU LEU SEQRES 11 A 428 HIS ARG ARG ILE ALA ASP SER GLY TYR PRO VAL ALA ALA SEQRES 12 A 428 LEU HIS ALA SER GLU GLY GLY ILE TYR GLY ARG PHE GLY SEQRES 13 A 428 TYR GLY PRO ALA THR THR LEU HIS GLU LEU THR VAL ASP SEQRES 14 A 428 ARG ARG PHE ALA ARG PHE HIS ALA ASP ALA PRO GLY GLY SEQRES 15 A 428 GLY LEU GLY GLY SER SER VAL ARG LEU VAL ARG PRO THR SEQRES 16 A 428 GLU HIS ARG GLY GLU PHE GLU ALA ILE TYR GLU ARG TRP SEQRES 17 A 428 ARG GLN GLN VAL PRO GLY GLY LEU LEU ARG PRO GLN VAL SEQRES 18 A 428 LEU TRP ASP GLU LEU LEU ALA GLU CYS LYS ALA ALA PRO SEQRES 19 A 428 GLY GLY ASP ARG GLU SER PHE ALA LEU LEU HIS PRO ASP SEQRES 20 A 428 GLY TYR ALA LEU TYR ARG VAL ASP ARG THR ASP LEU LYS SEQRES 21 A 428 LEU ALA ARG VAL SER GLU LEU ARG ALA VAL THR ALA ASP SEQRES 22 A 428 ALA HIS CYS ALA LEU TRP ARG ALA LEU ILE GLY LEU ASP SEQRES 23 A 428 SER MET GLU ARG ILE SER ILE ILE THR HIS PRO GLN ASP SEQRES 24 A 428 PRO LEU PRO HIS LEU LEU THR ASP THR ARG LEU ALA ARG SEQRES 25 A 428 THR THR TRP ARG GLN ASP GLY LEU TRP LEU ARG ILE MET SEQRES 26 A 428 ASN VAL PRO ALA ALA LEU GLU ALA ARG GLY TYR ALA HIS SEQRES 27 A 428 GLU VAL GLY GLU PHE SER THR VAL LEU GLU VAL SER ASP SEQRES 28 A 428 GLY GLY ARG PHE ALA LEU LYS ILE GLY ASP GLY ARG ALA SEQRES 29 A 428 ARG CYS THR PRO THR ASP ALA ALA ALA GLU ILE GLU MET SEQRES 30 A 428 ASP ARG ASP VAL LEU GLY SER LEU TYR LEU GLY ALA HIS SEQRES 31 A 428 ARG ALA SER THR LEU ALA ALA ALA ASN ARG LEU ARG THR SEQRES 32 A 428 LYS ASP SER GLN LEU LEU ARG ARG LEU ASP ALA ALA PHE SEQRES 33 A 428 ALA SER ASP VAL PRO VAL GLN THR ALA PHE GLU PHE SEQRES 1 B 428 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 428 LEU VAL PRO ARG GLY SER HIS MET PRO GLN SER ASP SER SEQRES 3 B 428 VAL THR VAL THR LEU CYS SER PRO THR GLU ASP ASP TRP SEQRES 4 B 428 PRO GLY MET PHE LEU LEU ALA ALA ALA SER PHE THR ASP SEQRES 5 B 428 PHE ILE GLY PRO GLU SER ALA THR ALA TRP ARG THR LEU SEQRES 6 B 428 VAL PRO THR ASP GLY ALA VAL VAL VAL ARG ASP GLY ALA SEQRES 7 B 428 GLY PRO GLY SER GLU VAL VAL GLY MET ALA LEU TYR MET SEQRES 8 B 428 ASP LEU ARG LEU THR VAL PRO GLY GLU VAL VAL LEU PRO SEQRES 9 B 428 THR ALA GLY LEU SER PHE VAL ALA VAL ALA PRO THR HIS SEQRES 10 B 428 ARG ARG ARG GLY LEU LEU ARG ALA MET CYS ALA GLU LEU SEQRES 11 B 428 HIS ARG ARG ILE ALA ASP SER GLY TYR PRO VAL ALA ALA SEQRES 12 B 428 LEU HIS ALA SER GLU GLY GLY ILE TYR GLY ARG PHE GLY SEQRES 13 B 428 TYR GLY PRO ALA THR THR LEU HIS GLU LEU THR VAL ASP SEQRES 14 B 428 ARG ARG PHE ALA ARG PHE HIS ALA ASP ALA PRO GLY GLY SEQRES 15 B 428 GLY LEU GLY GLY SER SER VAL ARG LEU VAL ARG PRO THR SEQRES 16 B 428 GLU HIS ARG GLY GLU PHE GLU ALA ILE TYR GLU ARG TRP SEQRES 17 B 428 ARG GLN GLN VAL PRO GLY GLY LEU LEU ARG PRO GLN VAL SEQRES 18 B 428 LEU TRP ASP GLU LEU LEU ALA GLU CYS LYS ALA ALA PRO SEQRES 19 B 428 GLY GLY ASP ARG GLU SER PHE ALA LEU LEU HIS PRO ASP SEQRES 20 B 428 GLY TYR ALA LEU TYR ARG VAL ASP ARG THR ASP LEU LYS SEQRES 21 B 428 LEU ALA ARG VAL SER GLU LEU ARG ALA VAL THR ALA ASP SEQRES 22 B 428 ALA HIS CYS ALA LEU TRP ARG ALA LEU ILE GLY LEU ASP SEQRES 23 B 428 SER MET GLU ARG ILE SER ILE ILE THR HIS PRO GLN ASP SEQRES 24 B 428 PRO LEU PRO HIS LEU LEU THR ASP THR ARG LEU ALA ARG SEQRES 25 B 428 THR THR TRP ARG GLN ASP GLY LEU TRP LEU ARG ILE MET SEQRES 26 B 428 ASN VAL PRO ALA ALA LEU GLU ALA ARG GLY TYR ALA HIS SEQRES 27 B 428 GLU VAL GLY GLU PHE SER THR VAL LEU GLU VAL SER ASP SEQRES 28 B 428 GLY GLY ARG PHE ALA LEU LYS ILE GLY ASP GLY ARG ALA SEQRES 29 B 428 ARG CYS THR PRO THR ASP ALA ALA ALA GLU ILE GLU MET SEQRES 30 B 428 ASP ARG ASP VAL LEU GLY SER LEU TYR LEU GLY ALA HIS SEQRES 31 B 428 ARG ALA SER THR LEU ALA ALA ALA ASN ARG LEU ARG THR SEQRES 32 B 428 LYS ASP SER GLN LEU LEU ARG ARG LEU ASP ALA ALA PHE SEQRES 33 B 428 ALA SER ASP VAL PRO VAL GLN THR ALA PHE GLU PHE FORMUL 3 HOH *344(H2 O) HELIX 1 1 ASP A 18 PHE A 30 1 13 HELIX 2 2 GLY A 35 ARG A 43 1 9 HELIX 3 3 THR A 44 VAL A 46 5 3 HELIX 4 4 GLY A 101 SER A 117 1 17 HELIX 5 5 TYR A 132 GLY A 136 5 5 HELIX 6 6 ARG A 173 GLU A 176 5 4 HELIX 7 7 HIS A 177 VAL A 192 1 16 HELIX 8 8 PRO A 199 GLU A 209 1 11 HELIX 9 9 THR A 251 GLY A 264 1 14 HELIX 10 10 PRO A 280 LEU A 285 1 6 HELIX 11 11 ASP A 287 ARG A 289 5 3 HELIX 12 12 ASN A 306 ARG A 314 1 9 HELIX 13 13 ASP A 358 LEU A 367 1 10 HELIX 14 14 ARG A 371 ALA A 378 1 8 HELIX 15 15 ASP A 385 ALA A 397 1 13 HELIX 16 16 THR B 15 ASP B 17 5 3 HELIX 17 17 ASP B 18 PHE B 30 1 13 HELIX 18 18 GLY B 35 ARG B 43 1 9 HELIX 19 19 THR B 44 VAL B 46 5 3 HELIX 20 20 GLY B 101 SER B 117 1 17 HELIX 21 21 TYR B 132 GLY B 136 5 5 HELIX 22 22 ARG B 173 GLU B 176 5 4 HELIX 23 23 HIS B 177 VAL B 192 1 16 HELIX 24 24 PRO B 199 GLU B 209 1 11 HELIX 25 25 THR B 251 GLY B 264 1 14 HELIX 26 26 PRO B 280 LEU B 285 1 6 HELIX 27 27 ASP B 287 ARG B 289 5 3 HELIX 28 28 ASN B 306 ARG B 314 1 9 HELIX 29 29 ASP B 358 LEU B 367 1 10 HELIX 30 30 ARG B 371 ALA B 378 1 8 HELIX 31 31 ASP B 385 ALA B 397 1 13 SHEET 1 A 7 VAL A 9 CYS A 12 0 SHEET 2 A 7 ALA A 51 ASP A 56 -1 O VAL A 53 N CYS A 12 SHEET 3 A 7 GLU A 63 VAL A 77 -1 O ALA A 68 N VAL A 52 SHEET 4 A 7 VAL A 81 VAL A 93 -1 O LEU A 83 N LEU A 75 SHEET 5 A 7 VAL A 121 HIS A 125 1 O ALA A 123 N ALA A 86 SHEET 6 A 7 LEU A 300 ILE A 304 -1 O ARG A 303 N ALA A 122 SHEET 7 A 7 GLY A 138 PRO A 139 -1 N GLY A 138 O LEU A 302 SHEET 1 B 7 ARG A 170 VAL A 172 0 SHEET 2 B 7 PHE A 221 HIS A 225 -1 O ALA A 222 N VAL A 172 SHEET 3 B 7 GLY A 228 VAL A 234 -1 O TYR A 232 N PHE A 221 SHEET 4 B 7 LEU A 241 ALA A 249 -1 O GLU A 246 N LEU A 231 SHEET 5 B 7 ARG A 270 THR A 275 1 O ARG A 270 N ALA A 242 SHEET 6 B 7 THR A 142 ASP A 149 -1 N HIS A 144 O THR A 275 SHEET 7 B 7 ALA A 291 ASP A 298 -1 O GLN A 297 N LEU A 143 SHEET 1 C 5 ARG A 343 PRO A 348 0 SHEET 2 C 5 GLY A 333 GLY A 340 -1 N ALA A 336 O THR A 347 SHEET 3 C 5 PHE A 323 VAL A 329 -1 N LEU A 327 O PHE A 335 SHEET 4 C 5 ILE A 355 MET A 357 1 O ILE A 355 N GLU A 328 SHEET 5 C 5 LEU A 381 THR A 383 -1 O ARG A 382 N GLU A 356 SHEET 1 D 7 VAL B 9 CYS B 12 0 SHEET 2 D 7 ALA B 51 ASP B 56 -1 O VAL B 53 N CYS B 12 SHEET 3 D 7 GLU B 63 VAL B 77 -1 O ALA B 68 N VAL B 52 SHEET 4 D 7 VAL B 81 VAL B 93 -1 O LEU B 83 N LEU B 75 SHEET 5 D 7 VAL B 121 HIS B 125 1 O ALA B 123 N ALA B 86 SHEET 6 D 7 LEU B 300 ILE B 304 -1 O ARG B 303 N ALA B 122 SHEET 7 D 7 GLY B 138 PRO B 139 -1 N GLY B 138 O LEU B 302 SHEET 1 E 7 ARG B 170 VAL B 172 0 SHEET 2 E 7 PHE B 221 HIS B 225 -1 O ALA B 222 N VAL B 172 SHEET 3 E 7 GLY B 228 VAL B 234 -1 O TYR B 232 N PHE B 221 SHEET 4 E 7 LEU B 241 ALA B 249 -1 O ARG B 243 N ARG B 233 SHEET 5 E 7 ARG B 270 THR B 275 1 O SER B 272 N VAL B 244 SHEET 6 E 7 THR B 142 ASP B 149 -1 N VAL B 148 O ILE B 271 SHEET 7 E 7 ALA B 291 ASP B 298 -1 O GLN B 297 N LEU B 143 SHEET 1 F 5 ARG B 343 PRO B 348 0 SHEET 2 F 5 GLY B 333 GLY B 340 -1 N ALA B 336 O THR B 347 SHEET 3 F 5 PHE B 323 VAL B 329 -1 N LEU B 327 O PHE B 335 SHEET 4 F 5 ILE B 355 MET B 357 1 O ILE B 355 N GLU B 328 SHEET 5 F 5 LEU B 381 THR B 383 -1 O ARG B 382 N GLU B 356 CRYST1 174.574 174.574 122.827 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005728 0.003307 0.000000 0.00000 SCALE2 0.000000 0.006614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008142 0.00000