HEADER HYDROLASE 22-JUL-11 3T1V TITLE MGLA BOUND TO GDP IN P2(1) TETRAMERIC ARRANGEMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLIDING PROTEIN MGLA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.6.5.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TTHA1132; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEXET KEYWDS G DOMAIN CONTAINING PROTEIN, BACTERIAL GTPASE, BACTERIAL POLARITY, KEYWDS 2 MOTILITY, POLE LOCALISATION, ALPHA/BETA PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.MIERTZSCHKE,I.R.VETTER,C.KOERNER,A.WITTINGHOFER REVDAT 3 30-OCT-24 3T1V 1 REMARK SEQADV LINK REVDAT 2 02-NOV-11 3T1V 1 JRNL REVDAT 1 31-AUG-11 3T1V 0 JRNL AUTH M.MIERTZSCHKE,C.KOERNER,I.R.VETTER,D.KEILBERG,E.HOT, JRNL AUTH 2 S.LEONARDY,L.SOGAARD-ANDERSEN,A.WITTINGHOFER JRNL TITL STRUCTURAL ANALYSIS OF THE RAS-LIKE G PROTEIN MGLA AND ITS JRNL TITL 2 COGNATE GAP MGLB AND IMPLICATIONS FOR BACTERIAL POLARITY. JRNL REF EMBO J. V. 30 4185 2011 JRNL REFN ISSN 0261-4189 JRNL PMID 21847100 JRNL DOI 10.1038/EMBOJ.2011.291 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1741 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2370 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 125 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6037 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 112 REMARK 3 SOLVENT ATOMS : 71 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.98000 REMARK 3 B22 (A**2) : -1.81000 REMARK 3 B33 (A**2) : 0.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.273 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.190 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.928 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6364 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8657 ; 1.773 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 780 ; 6.132 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 286 ;38.718 ;23.287 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1091 ;18.014 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;18.443 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 971 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4776 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3834 ; 0.966 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6221 ; 1.839 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2530 ; 3.369 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2427 ; 5.308 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. A VERY PRELIMINARY MODEL FROM LOW RESOLUTION SEMET REMARK 3 DATA WAS USED. REMARK 4 REMARK 4 3T1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066931. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97874 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34804 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 48.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 65% MPD, 0.1M TRIS-HCL , PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.43500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 194 REMARK 465 GLY A 195 REMARK 465 SER A 196 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MSE B 1 REMARK 465 GLY B 194 REMARK 465 GLY B 195 REMARK 465 SER B 196 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MSE C 1 REMARK 465 VAL C 192 REMARK 465 ALA C 193 REMARK 465 GLY C 194 REMARK 465 GLY C 195 REMARK 465 SER C 196 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MSE D 1 REMARK 465 GLY D 194 REMARK 465 GLY D 195 REMARK 465 SER D 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 193 CB REMARK 470 ALA B 193 CB REMARK 470 GLU C 38 CG CD OE1 OE2 REMARK 470 GLU D 43 CG CD OE1 OE2 REMARK 470 GLU D 152 CG CD OE1 OE2 REMARK 470 ALA D 193 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 168 O HOH B 203 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 73 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 73 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 53 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 68 19.69 49.14 REMARK 500 GLU B 66 76.79 -105.54 REMARK 500 VAL B 67 105.39 -53.97 REMARK 500 ARG B 143 -15.14 -45.87 REMARK 500 ALA B 148 126.27 -33.22 REMARK 500 ASP B 159 64.64 -154.21 REMARK 500 THR D 49 -166.53 -104.76 REMARK 500 LYS D 142 40.10 72.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP C 274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP D 274 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3T1O RELATED DB: PDB REMARK 900 RELATED ID: 3T1Q RELATED DB: PDB REMARK 900 RELATED ID: 3T1R RELATED DB: PDB REMARK 900 RELATED ID: 3T1S RELATED DB: PDB REMARK 900 RELATED ID: 3T12 RELATED DB: PDB REMARK 900 RELATED ID: 3T1T RELATED DB: PDB REMARK 900 RELATED ID: 3T1X RELATED DB: PDB DBREF 3T1V A 1 195 UNP Q5SJ82 Q5SJ82_THET8 1 196 DBREF 3T1V B 1 195 UNP Q5SJ82 Q5SJ82_THET8 1 196 DBREF 3T1V C 1 196 UNP Q5SJ82 Q5SJ82_THET8 1 196 DBREF 3T1V D 1 195 UNP Q5SJ82 Q5SJ82_THET8 1 196 SEQADV 3T1V GLY A -1 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V SER A 0 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V GLY B -1 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V SER B 0 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V GLY C -1 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V SER C 0 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V GLY D -1 UNP Q5SJ82 EXPRESSION TAG SEQADV 3T1V SER D 0 UNP Q5SJ82 EXPRESSION TAG SEQRES 1 A 198 GLY SER MSE SER THR ILE ASN PHE ALA ASN ARG GLU ILE SEQRES 2 A 198 ASN PHE LYS ILE VAL TYR TYR GLY PRO GLY LEU SER GLY SEQRES 3 A 198 LYS THR THR ASN LEU LYS TRP ILE TYR SER LYS VAL PRO SEQRES 4 A 198 GLU GLY ARG LYS GLY GLU MSE VAL SER LEU ALA THR GLU SEQRES 5 A 198 ASP GLU ARG THR LEU PHE PHE ASP PHE LEU PRO LEU ASP SEQRES 6 A 198 ILE GLY GLU VAL LYS GLY PHE LYS THR ARG PHE HIS LEU SEQRES 7 A 198 TYR THR VAL PRO GLY GLN VAL PHE TYR ASN ALA SER ARG SEQRES 8 A 198 LYS LEU ILE LEU ARG GLY VAL ASP GLY ILE VAL PHE VAL SEQRES 9 A 198 ALA ASP SER ALA PRO ASN ARG LEU ARG ALA ASN ALA GLU SEQRES 10 A 198 SER MSE ARG ASN MSE ARG GLU ASN LEU ALA GLU TYR GLY SEQRES 11 A 198 LEU THR LEU ASP ASP VAL PRO ILE VAL ILE GLN VAL ASN SEQRES 12 A 198 LYS ARG ASP LEU PRO ASP ALA LEU PRO VAL GLU MSE VAL SEQRES 13 A 198 ARG ALA VAL VAL ASP PRO GLU GLY LYS PHE PRO VAL LEU SEQRES 14 A 198 GLU ALA VAL ALA THR GLU GLY LYS GLY VAL PHE GLU THR SEQRES 15 A 198 LEU LYS GLU VAL SER ARG LEU VAL LEU ALA ARG VAL ALA SEQRES 16 A 198 GLY GLY SER SEQRES 1 B 198 GLY SER MSE SER THR ILE ASN PHE ALA ASN ARG GLU ILE SEQRES 2 B 198 ASN PHE LYS ILE VAL TYR TYR GLY PRO GLY LEU SER GLY SEQRES 3 B 198 LYS THR THR ASN LEU LYS TRP ILE TYR SER LYS VAL PRO SEQRES 4 B 198 GLU GLY ARG LYS GLY GLU MSE VAL SER LEU ALA THR GLU SEQRES 5 B 198 ASP GLU ARG THR LEU PHE PHE ASP PHE LEU PRO LEU ASP SEQRES 6 B 198 ILE GLY GLU VAL LYS GLY PHE LYS THR ARG PHE HIS LEU SEQRES 7 B 198 TYR THR VAL PRO GLY GLN VAL PHE TYR ASN ALA SER ARG SEQRES 8 B 198 LYS LEU ILE LEU ARG GLY VAL ASP GLY ILE VAL PHE VAL SEQRES 9 B 198 ALA ASP SER ALA PRO ASN ARG LEU ARG ALA ASN ALA GLU SEQRES 10 B 198 SER MSE ARG ASN MSE ARG GLU ASN LEU ALA GLU TYR GLY SEQRES 11 B 198 LEU THR LEU ASP ASP VAL PRO ILE VAL ILE GLN VAL ASN SEQRES 12 B 198 LYS ARG ASP LEU PRO ASP ALA LEU PRO VAL GLU MSE VAL SEQRES 13 B 198 ARG ALA VAL VAL ASP PRO GLU GLY LYS PHE PRO VAL LEU SEQRES 14 B 198 GLU ALA VAL ALA THR GLU GLY LYS GLY VAL PHE GLU THR SEQRES 15 B 198 LEU LYS GLU VAL SER ARG LEU VAL LEU ALA ARG VAL ALA SEQRES 16 B 198 GLY GLY SER SEQRES 1 C 198 GLY SER MSE SER THR ILE ASN PHE ALA ASN ARG GLU ILE SEQRES 2 C 198 ASN PHE LYS ILE VAL TYR TYR GLY PRO GLY LEU SER GLY SEQRES 3 C 198 LYS THR THR ASN LEU LYS TRP ILE TYR SER LYS VAL PRO SEQRES 4 C 198 GLU GLY ARG LYS GLY GLU MSE VAL SER LEU ALA THR GLU SEQRES 5 C 198 ASP GLU ARG THR LEU PHE PHE ASP PHE LEU PRO LEU ASP SEQRES 6 C 198 ILE GLY GLU VAL LYS GLY PHE LYS THR ARG PHE HIS LEU SEQRES 7 C 198 TYR THR VAL PRO GLY GLN VAL PHE TYR ASN ALA SER ARG SEQRES 8 C 198 LYS LEU ILE LEU ARG GLY VAL ASP GLY ILE VAL PHE VAL SEQRES 9 C 198 ALA ASP SER ALA PRO ASN ARG LEU ARG ALA ASN ALA GLU SEQRES 10 C 198 SER MSE ARG ASN MSE ARG GLU ASN LEU ALA GLU TYR GLY SEQRES 11 C 198 LEU THR LEU ASP ASP VAL PRO ILE VAL ILE GLN VAL ASN SEQRES 12 C 198 LYS ARG ASP LEU PRO ASP ALA LEU PRO VAL GLU MSE VAL SEQRES 13 C 198 ARG ALA VAL VAL ASP PRO GLU GLY LYS PHE PRO VAL LEU SEQRES 14 C 198 GLU ALA VAL ALA THR GLU GLY LYS GLY VAL PHE GLU THR SEQRES 15 C 198 LEU LYS GLU VAL SER ARG LEU VAL LEU ALA ARG VAL ALA SEQRES 16 C 198 GLY GLY SER SEQRES 1 D 198 GLY SER MSE SER THR ILE ASN PHE ALA ASN ARG GLU ILE SEQRES 2 D 198 ASN PHE LYS ILE VAL TYR TYR GLY PRO GLY LEU SER GLY SEQRES 3 D 198 LYS THR THR ASN LEU LYS TRP ILE TYR SER LYS VAL PRO SEQRES 4 D 198 GLU GLY ARG LYS GLY GLU MSE VAL SER LEU ALA THR GLU SEQRES 5 D 198 ASP GLU ARG THR LEU PHE PHE ASP PHE LEU PRO LEU ASP SEQRES 6 D 198 ILE GLY GLU VAL LYS GLY PHE LYS THR ARG PHE HIS LEU SEQRES 7 D 198 TYR THR VAL PRO GLY GLN VAL PHE TYR ASN ALA SER ARG SEQRES 8 D 198 LYS LEU ILE LEU ARG GLY VAL ASP GLY ILE VAL PHE VAL SEQRES 9 D 198 ALA ASP SER ALA PRO ASN ARG LEU ARG ALA ASN ALA GLU SEQRES 10 D 198 SER MSE ARG ASN MSE ARG GLU ASN LEU ALA GLU TYR GLY SEQRES 11 D 198 LEU THR LEU ASP ASP VAL PRO ILE VAL ILE GLN VAL ASN SEQRES 12 D 198 LYS ARG ASP LEU PRO ASP ALA LEU PRO VAL GLU MSE VAL SEQRES 13 D 198 ARG ALA VAL VAL ASP PRO GLU GLY LYS PHE PRO VAL LEU SEQRES 14 D 198 GLU ALA VAL ALA THR GLU GLY LYS GLY VAL PHE GLU THR SEQRES 15 D 198 LEU LYS GLU VAL SER ARG LEU VAL LEU ALA ARG VAL ALA SEQRES 16 D 198 GLY GLY SER MODRES 3T1V MSE A 44 MET SELENOMETHIONINE MODRES 3T1V MSE A 117 MET SELENOMETHIONINE MODRES 3T1V MSE A 120 MET SELENOMETHIONINE MODRES 3T1V MSE A 153 MET SELENOMETHIONINE MODRES 3T1V MSE B 44 MET SELENOMETHIONINE MODRES 3T1V MSE B 117 MET SELENOMETHIONINE MODRES 3T1V MSE B 120 MET SELENOMETHIONINE MODRES 3T1V MSE B 153 MET SELENOMETHIONINE MODRES 3T1V MSE C 44 MET SELENOMETHIONINE MODRES 3T1V MSE C 117 MET SELENOMETHIONINE MODRES 3T1V MSE C 120 MET SELENOMETHIONINE MODRES 3T1V MSE C 153 MET SELENOMETHIONINE MODRES 3T1V MSE D 44 MET SELENOMETHIONINE MODRES 3T1V MSE D 117 MET SELENOMETHIONINE MODRES 3T1V MSE D 120 MET SELENOMETHIONINE MODRES 3T1V MSE D 153 MET SELENOMETHIONINE HET MSE A 44 8 HET MSE A 117 8 HET MSE A 120 8 HET MSE A 153 8 HET MSE B 44 8 HET MSE B 117 8 HET MSE B 120 8 HET MSE B 153 8 HET MSE C 44 8 HET MSE C 117 8 HET MSE C 120 8 HET MSE C 153 8 HET MSE D 44 8 HET MSE D 117 8 HET MSE D 120 8 HET MSE D 153 8 HET GDP A 274 28 HET GDP B 274 28 HET GDP C 274 28 HET GDP D 274 28 HETNAM MSE SELENOMETHIONINE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 GDP 4(C10 H15 N5 O11 P2) FORMUL 9 HOH *71(H2 O) HELIX 1 1 GLY A 24 VAL A 36 1 13 HELIX 2 2 PRO A 37 LYS A 41 5 5 HELIX 3 3 ASN A 86 LEU A 93 1 8 HELIX 4 4 ALA A 106 ASN A 108 5 3 HELIX 5 5 ARG A 109 TYR A 127 1 19 HELIX 6 6 PRO A 150 ASP A 159 1 10 HELIX 7 7 VAL A 170 GLY A 174 5 5 HELIX 8 9 GLY B 24 SER B 34 1 11 HELIX 9 10 LYS B 35 VAL B 36 5 2 HELIX 10 11 PRO B 37 LYS B 41 5 5 HELIX 11 12 GLU B 66 PHE B 70 5 5 HELIX 12 13 ASN B 86 LEU B 93 1 8 HELIX 13 14 ALA B 106 ASN B 108 5 3 HELIX 14 15 ARG B 109 TYR B 127 1 19 HELIX 15 16 THR B 130 VAL B 134 5 5 HELIX 16 17 PRO B 150 ASP B 159 1 10 HELIX 17 18 VAL B 170 GLY B 174 5 5 HELIX 18 20 GLY C 24 LYS C 35 1 12 HELIX 19 21 VAL C 36 LYS C 41 5 6 HELIX 20 22 ASN C 86 LEU C 93 1 8 HELIX 21 23 ALA C 106 ASN C 108 5 3 HELIX 22 24 ARG C 109 TYR C 127 1 19 HELIX 23 25 PRO C 150 ASP C 159 1 10 HELIX 24 26 VAL C 170 GLY C 174 5 5 HELIX 25 27 GLY C 176 ALA C 190 1 15 HELIX 26 28 PHE D 6 ASN D 8 5 3 HELIX 27 29 GLY D 24 LYS D 35 1 12 HELIX 28 30 VAL D 36 LYS D 41 5 6 HELIX 29 31 ASN D 86 LEU D 93 1 8 HELIX 30 32 ALA D 106 ASN D 108 5 3 HELIX 31 33 ARG D 109 TYR D 127 1 19 HELIX 32 34 PRO D 150 ASP D 159 1 10 HELIX 33 35 VAL D 170 GLY D 174 5 5 SHEET 1 A10 ILE A 4 ASN A 5 0 SHEET 2 A10 GLU A 10 TYR A 18 -1 O GLU A 10 N ASN A 5 SHEET 3 A10 LYS A 71 THR A 78 1 O ARG A 73 N ILE A 11 SHEET 4 A10 ARG A 53 PHE A 59 -1 N PHE A 59 O PHE A 74 SHEET 5 A10 MSE A 44 ALA A 48 -1 N VAL A 45 O PHE A 56 SHEET 6 A10 MSE B 44 ALA B 48 -1 O ALA B 48 N MSE A 44 SHEET 7 A10 ARG B 53 PHE B 59 -1 O PHE B 56 N VAL B 45 SHEET 8 A10 LYS B 71 THR B 78 -1 O PHE B 74 N PHE B 59 SHEET 9 A10 GLU B 10 TYR B 18 1 N ILE B 11 O ARG B 73 SHEET 10 A10 ILE B 4 ASN B 5 -1 N ASN B 5 O GLU B 10 SHEET 1 B14 VAL A 166 GLU A 168 0 SHEET 2 B14 ILE A 136 VAL A 140 1 N VAL A 140 O LEU A 167 SHEET 3 B14 GLY A 98 ALA A 103 1 N PHE A 101 O GLN A 139 SHEET 4 B14 GLU A 10 TYR A 18 1 N TYR A 18 O VAL A 102 SHEET 5 B14 LYS A 71 THR A 78 1 O ARG A 73 N ILE A 11 SHEET 6 B14 ARG A 53 PHE A 59 -1 N PHE A 59 O PHE A 74 SHEET 7 B14 MSE A 44 ALA A 48 -1 N VAL A 45 O PHE A 56 SHEET 8 B14 MSE B 44 ALA B 48 -1 O ALA B 48 N MSE A 44 SHEET 9 B14 ARG B 53 PHE B 59 -1 O PHE B 56 N VAL B 45 SHEET 10 B14 LYS B 71 THR B 78 -1 O PHE B 74 N PHE B 59 SHEET 11 B14 GLU B 10 TYR B 18 1 N ILE B 11 O ARG B 73 SHEET 12 B14 GLY B 98 ASP B 104 1 O GLY B 98 N VAL B 16 SHEET 13 B14 ILE B 136 ASN B 141 1 O GLN B 139 N PHE B 101 SHEET 14 B14 VAL B 166 ALA B 169 1 O LEU B 167 N VAL B 140 SHEET 1 C 5 ILE C 4 ASN C 5 0 SHEET 2 C 5 GLU C 10 TYR C 18 -1 O GLU C 10 N ASN C 5 SHEET 3 C 5 LYS C 71 THR C 78 1 O HIS C 75 N ILE C 15 SHEET 4 C 5 ARG C 53 PHE C 59 -1 N LEU C 55 O THR C 78 SHEET 5 C 5 VAL C 45 ALA C 48 -1 N LEU C 47 O THR C 54 SHEET 1 D 5 ILE C 4 ASN C 5 0 SHEET 2 D 5 GLU C 10 TYR C 18 -1 O GLU C 10 N ASN C 5 SHEET 3 D 5 GLY C 98 ASP C 104 1 O VAL C 100 N TYR C 18 SHEET 4 D 5 ILE C 136 ASN C 141 1 O GLN C 139 N PHE C 101 SHEET 5 D 5 VAL C 166 GLU C 168 1 O LEU C 167 N VAL C 140 SHEET 1 E 5 ILE D 4 ASN D 5 0 SHEET 2 E 5 GLU D 10 TYR D 18 -1 O GLU D 10 N ASN D 5 SHEET 3 E 5 LYS D 71 THR D 78 1 O ARG D 73 N ILE D 11 SHEET 4 E 5 ARG D 53 PHE D 59 -1 N LEU D 55 O THR D 78 SHEET 5 E 5 VAL D 45 ALA D 48 -1 N VAL D 45 O PHE D 56 SHEET 1 F 5 ILE D 4 ASN D 5 0 SHEET 2 F 5 GLU D 10 TYR D 18 -1 O GLU D 10 N ASN D 5 SHEET 3 F 5 GLY D 98 ASP D 104 1 O VAL D 100 N TYR D 18 SHEET 4 F 5 ILE D 136 ASN D 141 1 O GLN D 139 N PHE D 101 SHEET 5 F 5 VAL D 166 ALA D 169 1 O LEU D 167 N VAL D 140 LINK C GLU A 43 N MSE A 44 1555 1555 1.32 LINK C MSE A 44 N VAL A 45 1555 1555 1.34 LINK C SER A 116 N MSE A 117 1555 1555 1.31 LINK C MSE A 117 N ARG A 118 1555 1555 1.33 LINK C ASN A 119 N MSE A 120 1555 1555 1.32 LINK C MSE A 120 N ARG A 121 1555 1555 1.33 LINK C GLU A 152 N MSE A 153 1555 1555 1.32 LINK C MSE A 153 N VAL A 154 1555 1555 1.32 LINK C GLU B 43 N MSE B 44 1555 1555 1.32 LINK C MSE B 44 N VAL B 45 1555 1555 1.33 LINK C SER B 116 N MSE B 117 1555 1555 1.32 LINK C MSE B 117 N ARG B 118 1555 1555 1.33 LINK C ASN B 119 N MSE B 120 1555 1555 1.33 LINK C MSE B 120 N ARG B 121 1555 1555 1.33 LINK C GLU B 152 N MSE B 153 1555 1555 1.34 LINK C MSE B 153 N VAL B 154 1555 1555 1.34 LINK C GLU C 43 N MSE C 44 1555 1555 1.31 LINK C MSE C 44 N VAL C 45 1555 1555 1.35 LINK C SER C 116 N MSE C 117 1555 1555 1.32 LINK C MSE C 117 N ARG C 118 1555 1555 1.34 LINK C ASN C 119 N MSE C 120 1555 1555 1.32 LINK C MSE C 120 N ARG C 121 1555 1555 1.33 LINK C GLU C 152 N MSE C 153 1555 1555 1.33 LINK C MSE C 153 N VAL C 154 1555 1555 1.34 LINK C GLU D 43 N MSE D 44 1555 1555 1.32 LINK C MSE D 44 N VAL D 45 1555 1555 1.34 LINK C SER D 116 N MSE D 117 1555 1555 1.32 LINK C MSE D 117 N ARG D 118 1555 1555 1.34 LINK C ASN D 119 N MSE D 120 1555 1555 1.33 LINK C MSE D 120 N ARG D 121 1555 1555 1.33 LINK C GLU D 152 N MSE D 153 1555 1555 1.34 LINK C MSE D 153 N VAL D 154 1555 1555 1.33 CISPEP 1 ALA C 190 ARG C 191 0 6.39 SITE 1 AC1 15 LEU A 22 SER A 23 GLY A 24 LYS A 25 SITE 2 AC1 15 THR A 26 THR A 27 GLY A 81 ASN A 141 SITE 3 AC1 15 LYS A 142 ASP A 144 VAL A 170 ALA A 171 SITE 4 AC1 15 THR A 172 HOH A 204 HOH A 207 SITE 1 AC2 15 LEU B 22 SER B 23 GLY B 24 LYS B 25 SITE 2 AC2 15 THR B 26 THR B 27 PRO B 80 GLY B 81 SITE 3 AC2 15 ASN B 141 LYS B 142 ASP B 144 VAL B 170 SITE 4 AC2 15 ALA B 171 THR B 172 MSE C 153 SITE 1 AC3 15 LEU C 22 SER C 23 GLY C 24 LYS C 25 SITE 2 AC3 15 THR C 26 THR C 27 GLY C 81 ASN C 141 SITE 3 AC3 15 LYS C 142 ASP C 144 LEU C 145 VAL C 170 SITE 4 AC3 15 ALA C 171 THR C 172 HOH C 207 SITE 1 AC4 13 LEU D 22 SER D 23 GLY D 24 LYS D 25 SITE 2 AC4 13 THR D 26 THR D 27 GLY D 81 ASN D 141 SITE 3 AC4 13 LYS D 142 ASP D 144 VAL D 170 ALA D 171 SITE 4 AC4 13 THR D 172 CRYST1 94.380 48.870 100.660 90.00 104.17 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010595 0.000000 0.002675 0.00000 SCALE2 0.000000 0.020462 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010246 0.00000