HEADER OXIDOREDUCTASE 23-JUL-11 3T2Y TITLE CRYSTAL STRUCTURE OF SULFIDE:QUINONE OXIDOREDUCTASE HIS132ALA VARIANT TITLE 2 FROM ACIDITHIOBACILLUS FERROOXIDANS WITH BOUND DISULFIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFIDE-QUINONE REDUCTASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIDITHIOBACILLUS FERROOXIDANS; SOURCE 3 ORGANISM_TAXID: 243159; SOURCE 4 STRAIN: ATCC 23270 / DSM 14882 / NCIB 8455; SOURCE 5 GENE: AFE_1792; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SULFIDE:QUINONE OXIDOREDUCTASE, HIS132ALA VARIANT, INTEGRAL MONOTOPIC KEYWDS 2 MEMBRANE PROTEIN, COMPLEX WITH DISULFIDE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.CHERNEY,Y.ZHANG,M.N.G.JAMES,J.H.WEINER REVDAT 2 13-JUN-12 3T2Y 1 JRNL REVDAT 1 16-MAY-12 3T2Y 0 JRNL AUTH M.M.CHERNEY,Y.ZHANG,M.N.JAMES,J.H.WEINER JRNL TITL STRUCTURE-ACTIVITY CHARACTERIZATION OF SULFIDE:QUINONE JRNL TITL 2 OXIDOREDUCTASE VARIANTS. JRNL REF J.STRUCT.BIOL. V. 178 319 2012 JRNL REFN ISSN 1047-8477 JRNL PMID 22542586 JRNL DOI 10.1016/J.JSB.2012.04.007 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.9 REMARK 3 NUMBER OF REFLECTIONS : 15185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1313 - 5.3841 0.82 2843 111 0.1674 0.2559 REMARK 3 2 5.3841 - 4.2743 0.84 2856 144 0.1139 0.1722 REMARK 3 3 4.2743 - 3.7342 0.71 2421 129 0.1546 0.2186 REMARK 3 4 3.7342 - 3.3929 0.56 1905 113 0.1644 0.2778 REMARK 3 5 3.3929 - 3.1497 0.87 2959 138 0.1765 0.2682 REMARK 3 6 3.1497 - 2.9641 0.87 2953 151 0.1999 0.2870 REMARK 3 7 2.9641 - 2.8156 0.88 2936 202 0.2192 0.3310 REMARK 3 8 2.8156 - 2.6931 0.88 2990 156 0.2462 0.3298 REMARK 3 9 2.6931 - 2.5894 0.56 1866 111 0.2966 0.3678 REMARK 3 10 2.5894 - 2.5001 0.89 2983 179 0.3301 0.3977 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 36.43 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.980 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.16260 REMARK 3 B22 (A**2) : -7.16260 REMARK 3 B33 (A**2) : 14.32510 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3277 REMARK 3 ANGLE : 1.078 4442 REMARK 3 CHIRALITY : 0.070 485 REMARK 3 PLANARITY : 0.008 561 REMARK 3 DIHEDRAL : 16.078 1197 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain 'A' and (resseq 1:161) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6002 -26.8502 12.2142 REMARK 3 T TENSOR REMARK 3 T11: 0.3141 T22: 0.4040 REMARK 3 T33: 0.1847 T12: -0.1111 REMARK 3 T13: 0.0859 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 2.3788 L22: 2.6602 REMARK 3 L33: 0.3129 L12: 0.4737 REMARK 3 L13: -0.3201 L23: -0.4881 REMARK 3 S TENSOR REMARK 3 S11: 0.1216 S12: -0.4614 S13: 0.2124 REMARK 3 S21: 0.4978 S22: -0.2031 S23: 0.2043 REMARK 3 S31: 0.0514 S32: -0.2068 S33: 0.0455 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain 'A' and (resseq 162:232) REMARK 3 ORIGIN FOR THE GROUP (A): 64.4705 -17.0569 6.1098 REMARK 3 T TENSOR REMARK 3 T11: 0.1604 T22: 0.1958 REMARK 3 T33: 0.5220 T12: -0.1635 REMARK 3 T13: -0.1729 T23: 0.1121 REMARK 3 L TENSOR REMARK 3 L11: 1.8270 L22: 2.3821 REMARK 3 L33: 1.1376 L12: -0.1559 REMARK 3 L13: 0.1556 L23: 0.0264 REMARK 3 S TENSOR REMARK 3 S11: 0.1355 S12: -0.1179 S13: 0.0202 REMARK 3 S21: 0.3941 S22: -0.3064 S23: -1.6735 REMARK 3 S31: -0.5283 S32: 0.1698 S33: 0.0064 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain 'A' and (resseq 233:341) REMARK 3 ORIGIN FOR THE GROUP (A): 45.7974 -25.9311 -2.5443 REMARK 3 T TENSOR REMARK 3 T11: 0.2121 T22: 0.3390 REMARK 3 T33: 0.1383 T12: -0.0562 REMARK 3 T13: 0.0465 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 3.1366 L22: 2.1959 REMARK 3 L33: 0.1187 L12: 0.7053 REMARK 3 L13: 0.4177 L23: -0.7436 REMARK 3 S TENSOR REMARK 3 S11: -0.0413 S12: 0.2970 S13: -0.3016 REMARK 3 S21: -0.1661 S22: 0.0890 S23: -0.0576 REMARK 3 S31: 0.1346 S32: -0.1336 S33: -0.0329 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: chain 'A' and (resseq 342:377) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5019 -10.4256 -1.9901 REMARK 3 T TENSOR REMARK 3 T11: 0.2472 T22: 0.1844 REMARK 3 T33: 0.3390 T12: -0.0540 REMARK 3 T13: 0.0339 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 2.3525 L22: 3.0459 REMARK 3 L33: 1.4766 L12: 0.3983 REMARK 3 L13: -1.8167 L23: -1.0158 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.3919 S13: 0.0884 REMARK 3 S21: -0.2373 S22: 0.1380 S23: 0.1461 REMARK 3 S31: 0.0114 S32: -0.3945 S33: -0.0993 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: chain 'A' and (resseq 378:407) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2386 -7.1976 11.8781 REMARK 3 T TENSOR REMARK 3 T11: 0.4574 T22: 0.3194 REMARK 3 T33: 0.3677 T12: -0.0275 REMARK 3 T13: 0.1299 T23: -0.0661 REMARK 3 L TENSOR REMARK 3 L11: 3.2042 L22: 2.8427 REMARK 3 L33: 3.2582 L12: 2.2254 REMARK 3 L13: -2.3345 L23: -1.6028 REMARK 3 S TENSOR REMARK 3 S11: 0.3530 S12: -0.2998 S13: 0.6891 REMARK 3 S21: 0.8188 S22: -0.1190 S23: 0.6036 REMARK 3 S31: -0.1023 S32: -0.2276 S33: -0.1578 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3T2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-11. REMARK 100 THE RCSB ID CODE IS RCSB066970. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE-ROOT I REMARK 200 -BEAM SINGLE CRYSTAL; ASYMMETRIC REMARK 200 CUT 4.965 DEGS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15185 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 79.4 REMARK 200 DATA REDUNDANCY : 10.000 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : 0.12300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : 0.89300 REMARK 200 R SYM FOR SHELL (I) : 0.89300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: REFINEMENT REMARK 200 SOFTWARE USED: PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 600, 0.1 M BIS-TRIS BUFFER, REMARK 280 0.1 M MGSO4, 0.05% DDM, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.57333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.28667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.57333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.28667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.57333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 27.28667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 54.57333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.28667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 408 REMARK 465 PRO A 409 REMARK 465 PHE A 410 REMARK 465 TYR A 411 REMARK 465 GLU A 412 REMARK 465 LYS A 413 REMARK 465 VAL A 414 REMARK 465 LEU A 415 REMARK 465 PHE A 416 REMARK 465 LYS A 417 REMARK 465 MET A 418 REMARK 465 MET A 419 REMARK 465 GLY A 420 REMARK 465 ILE A 421 REMARK 465 THR A 422 REMARK 465 ARG A 423 REMARK 465 LEU A 424 REMARK 465 LYS A 425 REMARK 465 GLU A 426 REMARK 465 GLU A 427 REMARK 465 ASP A 428 REMARK 465 THR A 429 REMARK 465 HIS A 430 REMARK 465 ARG A 431 REMARK 465 LYS A 432 REMARK 465 ALA A 433 REMARK 465 SER A 434 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 VAL A 42 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 63 -76.64 -26.44 REMARK 500 SER A 159 -3.41 -141.46 REMARK 500 LYS A 177 12.11 -59.21 REMARK 500 LEU A 199 17.62 56.36 REMARK 500 ASP A 206 51.30 -101.59 REMARK 500 LYS A 230 149.25 -175.72 REMARK 500 GLU A 232 129.38 -172.65 REMARK 500 GLU A 243 -8.36 -59.68 REMARK 500 GLU A 341 13.95 -144.05 REMARK 500 PRO A 371 -154.04 -82.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE H2S A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE S2H A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KPG RELATED DB: PDB REMARK 900 RELATED ID: 3KPI RELATED DB: PDB REMARK 900 RELATED ID: 3KPK RELATED DB: PDB REMARK 900 RELATED ID: 3HYV RELATED DB: PDB REMARK 900 RELATED ID: 3HYW RELATED DB: PDB REMARK 900 RELATED ID: 3HYX RELATED DB: PDB REMARK 900 RELATED ID: 3SX6 RELATED DB: PDB REMARK 900 RELATED ID: 3SXI RELATED DB: PDB REMARK 900 RELATED ID: 3SY4 RELATED DB: PDB REMARK 900 RELATED ID: 3SYI RELATED DB: PDB REMARK 900 RELATED ID: 3SZ0 RELATED DB: PDB REMARK 900 RELATED ID: 3SZC RELATED DB: PDB REMARK 900 RELATED ID: 3SZF RELATED DB: PDB REMARK 900 RELATED ID: 3SZW RELATED DB: PDB REMARK 900 RELATED ID: 3T0K RELATED DB: PDB REMARK 900 RELATED ID: 3T14 RELATED DB: PDB REMARK 900 RELATED ID: 3T2K RELATED DB: PDB REMARK 900 RELATED ID: 3T2Z RELATED DB: PDB REMARK 900 RELATED ID: 3T31 RELATED DB: PDB DBREF 3T2Y A 1 434 UNP B7JBP8 B7JBP8_ACIF2 1 434 SEQADV 3T2Y ALA A 132 UNP B7JBP8 HIS 132 ENGINEERED MUTATION SEQRES 1 A 434 MET ALA HIS VAL VAL ILE LEU GLY ALA GLY THR GLY GLY SEQRES 2 A 434 MET PRO ALA ALA TYR GLU MET LYS GLU ALA LEU GLY SER SEQRES 3 A 434 GLY HIS GLU VAL THR LEU ILE SER ALA ASN ASP TYR PHE SEQRES 4 A 434 GLN PHE VAL PRO SER ASN PRO TRP VAL GLY VAL GLY TRP SEQRES 5 A 434 LYS GLU ARG ASP ASP ILE ALA PHE PRO ILE ARG HIS TYR SEQRES 6 A 434 VAL GLU ARG LYS GLY ILE HIS PHE ILE ALA GLN SER ALA SEQRES 7 A 434 GLU GLN ILE ASP ALA GLU ALA GLN ASN ILE THR LEU ALA SEQRES 8 A 434 ASP GLY ASN THR VAL HIS TYR ASP TYR LEU MET ILE ALA SEQRES 9 A 434 THR GLY PRO LYS LEU ALA PHE GLU ASN VAL PRO GLY SER SEQRES 10 A 434 ASP PRO HIS GLU GLY PRO VAL GLN SER ILE CYS THR VAL SEQRES 11 A 434 ASP ALA ALA GLU ARG ALA PHE ALA GLU TYR GLN ALA LEU SEQRES 12 A 434 LEU ARG GLU PRO GLY PRO ILE VAL ILE GLY ALA MET ALA SEQRES 13 A 434 GLY ALA SER CYS PHE GLY PRO ALA TYR GLU TYR ALA MET SEQRES 14 A 434 ILE VAL ALA SER ASP LEU LYS LYS ARG GLY MET ARG ASP SEQRES 15 A 434 LYS ILE PRO SER PHE THR PHE ILE THR SER GLU PRO TYR SEQRES 16 A 434 ILE GLY HIS LEU GLY ILE GLN GLY VAL GLY ASP SER LYS SEQRES 17 A 434 GLY ILE LEU THR LYS GLY LEU LYS GLU GLU GLY ILE GLU SEQRES 18 A 434 ALA TYR THR ASN CYS LYS VAL THR LYS VAL GLU ASP ASN SEQRES 19 A 434 LYS MET TYR VAL THR GLN VAL ASP GLU LYS GLY GLU THR SEQRES 20 A 434 ILE LYS GLU MET VAL LEU PRO VAL LYS PHE GLY MET MET SEQRES 21 A 434 ILE PRO ALA PHE LYS GLY VAL PRO ALA VAL ALA GLY VAL SEQRES 22 A 434 GLU GLY LEU CYS ASN PRO GLY GLY PHE VAL LEU VAL ASP SEQRES 23 A 434 GLU HIS GLN ARG SER LYS LYS TYR ALA ASN ILE PHE ALA SEQRES 24 A 434 ALA GLY ILE ALA ILE ALA ILE PRO PRO VAL GLU THR THR SEQRES 25 A 434 PRO VAL PRO THR GLY ALA PRO LYS THR GLY TYR MET ILE SEQRES 26 A 434 GLU SER MET VAL SER ALA ALA VAL HIS ASN ILE LYS ALA SEQRES 27 A 434 ASP LEU GLU GLY ARG LYS GLY GLU GLN THR MET GLY THR SEQRES 28 A 434 TRP ASN ALA VAL CYS PHE ALA ASP MET GLY ASP ARG GLY SEQRES 29 A 434 ALA ALA PHE ILE ALA LEU PRO GLN LEU LYS PRO ARG LYS SEQRES 30 A 434 VAL ASP VAL PHE ALA TYR GLY ARG TRP VAL HIS LEU ALA SEQRES 31 A 434 LYS VAL ALA PHE GLU LYS TYR PHE ILE ARG LYS MET LYS SEQRES 32 A 434 MET GLY VAL SER GLU PRO PHE TYR GLU LYS VAL LEU PHE SEQRES 33 A 434 LYS MET MET GLY ILE THR ARG LEU LYS GLU GLU ASP THR SEQRES 34 A 434 HIS ARG LYS ALA SER HET FAD A 500 53 HET LMT A 501 35 HET H2S A 504 1 HET S2H A 505 2 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM H2S HYDROSULFURIC ACID HETNAM S2H HYDROGEN DISULFIDE HETSYN H2S HYDROGEN SULFIDE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 LMT C24 H46 O11 FORMUL 4 H2S H2 S FORMUL 5 S2H H2 S2 FORMUL 6 HOH *69(H2 O) HELIX 1 1 GLY A 12 GLY A 25 1 14 HELIX 2 2 SER A 44 VAL A 50 1 7 HELIX 3 3 GLU A 54 ILE A 58 1 5 HELIX 4 4 ILE A 62 ARG A 68 1 7 HELIX 5 5 PHE A 111 VAL A 114 5 4 HELIX 6 6 THR A 129 GLU A 146 1 18 HELIX 7 7 PHE A 161 LYS A 177 1 17 HELIX 8 8 ARG A 178 ILE A 184 5 7 HELIX 9 9 ASP A 206 GLU A 218 1 13 HELIX 10 10 VAL A 267 GLY A 272 1 6 HELIX 11 11 GLY A 301 ILE A 304 5 4 HELIX 12 12 THR A 321 LEU A 340 1 20 HELIX 13 13 ARG A 385 GLY A 405 1 21 SHEET 1 A 5 HIS A 72 ALA A 75 0 SHEET 2 A 5 GLU A 29 SER A 34 1 N LEU A 32 O HIS A 72 SHEET 3 A 5 HIS A 3 LEU A 7 1 N ILE A 6 O THR A 31 SHEET 4 A 5 TYR A 100 ILE A 103 1 O MET A 102 N VAL A 5 SHEET 5 A 5 ILE A 297 ALA A 299 1 O PHE A 298 N LEU A 101 SHEET 1 B 2 TYR A 38 GLN A 40 0 SHEET 2 B 2 ALA A 59 PRO A 61 -1 O PHE A 60 N PHE A 39 SHEET 1 C 3 ALA A 78 ASP A 82 0 SHEET 2 C 3 ASN A 87 LEU A 90 -1 O ASN A 87 N ASP A 82 SHEET 3 C 3 THR A 95 HIS A 97 -1 O VAL A 96 N ILE A 88 SHEET 1 D 2 LYS A 108 LEU A 109 0 SHEET 2 D 2 PHE A 264 LYS A 265 -1 O LYS A 265 N LYS A 108 SHEET 1 E 5 VAL A 124 GLN A 125 0 SHEET 2 E 5 PHE A 257 ILE A 261 1 O GLY A 258 N GLN A 125 SHEET 3 E 5 ILE A 150 ALA A 154 1 N GLY A 153 O ILE A 261 SHEET 4 E 5 PHE A 187 THR A 191 1 O THR A 188 N ILE A 150 SHEET 5 E 5 GLU A 221 THR A 224 1 O GLU A 221 N PHE A 189 SHEET 1 F 3 CYS A 226 GLU A 232 0 SHEET 2 F 3 LYS A 235 VAL A 241 -1 O THR A 239 N LYS A 227 SHEET 3 F 3 THR A 247 PRO A 254 -1 O LEU A 253 N MET A 236 SHEET 1 G 3 ALA A 354 ASP A 359 0 SHEET 2 G 3 GLY A 364 LEU A 370 -1 O ALA A 365 N ALA A 358 SHEET 3 G 3 VAL A 378 GLY A 384 -1 O ALA A 382 N ALA A 366 LINK SG BCYS A 160 S H2S A 504 1555 1555 2.10 LINK SG ACYS A 160 S H2S A 504 1555 1555 2.10 LINK SG ACYS A 356 S1 S2H A 505 1555 1555 2.12 LINK SG BCYS A 356 S1 S2H A 505 1555 1555 2.15 CISPEP 1 LEU A 370 PRO A 371 0 -5.01 CISPEP 2 LYS A 374 PRO A 375 0 -4.38 SITE 1 AC1 29 LEU A 7 GLY A 8 ALA A 9 GLY A 10 SITE 2 AC1 29 THR A 11 GLY A 12 SER A 34 ALA A 35 SITE 3 AC1 29 VAL A 42 PRO A 43 SER A 77 ALA A 78 SITE 4 AC1 29 ALA A 104 THR A 105 GLY A 106 PRO A 107 SITE 5 AC1 29 CYS A 160 PRO A 163 GLY A 301 ILE A 302 SITE 6 AC1 29 LYS A 320 THR A 321 GLY A 322 ILE A 325 SITE 7 AC1 29 VAL A 355 PHE A 357 HOH A 520 HOH A 522 SITE 8 AC1 29 HOH A 525 SITE 1 AC2 11 MET A 169 GLY A 205 ASP A 206 ILE A 210 SITE 2 AC2 11 LEU A 211 CYS A 356 ALA A 358 ALA A 365 SITE 3 AC2 11 TYR A 383 HOH A 539 HOH A 548 SITE 1 AC3 2 CYS A 160 S2H A 505 SITE 1 AC4 3 GLY A 162 CYS A 356 H2S A 504 CRYST1 150.070 150.070 81.860 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006664 0.003847 0.000000 0.00000 SCALE2 0.000000 0.007694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012216 0.00000