HEADER TRANSFERASE 26-JUL-11 3T57 TITLE ACTIVITY AND CRYSTAL STRUCTURE OF ARABIDOPSIS UDP-N-ACETYLGLUCOSAMINE TITLE 2 ACYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE DOMAIN-CONTAINING COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RESIDUES 34-336; COMPND 6 SYNONYM: UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE-LIKE PROTEIN; COMPND 7 EC: 2.3.1.129; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS, THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 STRAIN: VAR. COLUMBIA; SOURCE 6 GENE: AT4G29540, LPXA, T16L4.50; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: C41(DE3) KEYWDS LEFT-HANDED PARALLEL BETA HELIX, ACYLTRANSFERASE, LIPID A KEYWDS 2 BIOSYNTHESIS, LIPID SYNTHESIS, ACYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.R.H.RAETZ,S.H.JOO REVDAT 3 13-SEP-23 3T57 1 SEQADV REVDAT 2 13-JUN-12 3T57 1 JRNL REVDAT 1 23-MAY-12 3T57 0 JRNL AUTH S.H.JOO,H.S.CHUNG,C.R.RAETZ,T.A.GARRETT JRNL TITL ACTIVITY AND CRYSTAL STRUCTURE OF ARABIDOPSIS JRNL TITL 2 THALIANAUDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE. JRNL REF BIOCHEMISTRY V. 51 4322 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22545860 JRNL DOI 10.1021/BI3002242 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 24836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1319 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1795 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2179 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.690 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2222 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2999 ; 1.163 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 289 ; 6.358 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;36.147 ;23.958 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 380 ;13.990 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;12.596 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1671 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1420 ; 0.487 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2283 ; 0.982 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 802 ; 1.751 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 715 ; 2.996 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7541 37.7170 11.8276 REMARK 3 T TENSOR REMARK 3 T11: 0.1859 T22: 0.1846 REMARK 3 T33: 0.2219 T12: 0.0148 REMARK 3 T13: -0.0120 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.2333 L22: 0.2180 REMARK 3 L33: 1.0978 L12: -0.0743 REMARK 3 L13: -0.1178 L23: -0.1129 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: -0.0136 S13: -0.0276 REMARK 3 S21: 0.0100 S22: 0.0026 S23: 0.0057 REMARK 3 S31: 0.0620 S32: 0.0232 S33: -0.0162 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 296 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0361 28.2949 43.4021 REMARK 3 T TENSOR REMARK 3 T11: 0.2802 T22: 0.2555 REMARK 3 T33: 0.0583 T12: 0.0267 REMARK 3 T13: 0.0473 T23: 0.0396 REMARK 3 L TENSOR REMARK 3 L11: 3.0862 L22: 4.7639 REMARK 3 L33: 2.5793 L12: 0.4849 REMARK 3 L13: 0.2889 L23: -0.5432 REMARK 3 S TENSOR REMARK 3 S11: -0.1444 S12: -0.5442 S13: 0.0976 REMARK 3 S21: 0.5803 S22: 0.0000 S23: 0.3414 REMARK 3 S31: 0.1699 S32: -0.1290 S33: 0.1444 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 297 A 327 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2652 26.3689 39.6664 REMARK 3 T TENSOR REMARK 3 T11: 0.2408 T22: 0.2929 REMARK 3 T33: 0.1238 T12: 0.1340 REMARK 3 T13: -0.0503 T23: 0.0998 REMARK 3 L TENSOR REMARK 3 L11: 2.2737 L22: 6.1989 REMARK 3 L33: 2.5973 L12: 1.5687 REMARK 3 L13: -1.3524 L23: -1.3473 REMARK 3 S TENSOR REMARK 3 S11: -0.1021 S12: -0.4243 S13: -0.2408 REMARK 3 S21: 0.2858 S22: -0.0729 S23: -0.4284 REMARK 3 S31: 0.3746 S32: 0.6268 S33: 0.1750 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3T57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26374 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LXA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CITRATE(PH 5.6), 1.0 M LITHIUM SULFATE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 100.12500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 100.12500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 100.12500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 100.12500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 100.12500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 100.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 43.09750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 74.64706 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -43.09750 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 74.64706 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 422 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 455 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 467 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 32 REMARK 465 ASP A 33 REMARK 465 SER A 34 REMARK 465 ARG A 35 REMARK 465 ASP A 36 REMARK 465 SER A 37 REMARK 465 GLU A 38 REMARK 465 VAL A 39 REMARK 465 PHE A 328 REMARK 465 ARG A 329 REMARK 465 GLN A 330 REMARK 465 TRP A 331 REMARK 465 LEU A 332 REMARK 465 ASP A 333 REMARK 465 SER A 334 REMARK 465 THR A 335 REMARK 465 THR A 336 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O SER A 44 OH TYR A 62 2665 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 203 -128.17 -85.15 REMARK 500 PHE A 217 -0.36 71.55 REMARK 500 GLU A 245 -144.45 42.44 REMARK 500 ARG A 246 105.68 -56.23 REMARK 500 SER A 280 65.27 -107.60 REMARK 500 ASP A 298 93.05 -69.34 REMARK 500 GLU A 320 131.11 -39.11 REMARK 500 SER A 321 -27.30 76.03 REMARK 500 REMARK 500 REMARK: NULL DBREF 3T57 A 33 336 UNP Q9SU91 Q9SU91_ARATH 33 336 SEQADV 3T57 MET A 32 UNP Q9SU91 INITIATING METHIONINE SEQRES 1 A 305 MET ASP SER ARG ASP SER GLU VAL LEU ILE HIS PRO SER SEQRES 2 A 305 ALA VAL VAL HIS PRO ASN ALA VAL ILE GLY LYS GLY VAL SEQRES 3 A 305 SER VAL GLY PRO TYR CYS THR ILE GLY SER SER VAL LYS SEQRES 4 A 305 LEU GLY ASN GLY CYS LYS LEU TYR PRO SER SER HIS VAL SEQRES 5 A 305 PHE GLY ASN THR GLU LEU GLY GLU SER CYS VAL LEU MET SEQRES 6 A 305 THR GLY ALA VAL VAL GLY ASP GLU LEU PRO GLY TYR THR SEQRES 7 A 305 PHE ILE GLY CYS ASN ASN ILE ILE GLY HIS HIS ALA VAL SEQRES 8 A 305 VAL GLY VAL LYS CYS GLN ASP LEU LYS TYR LYS HIS GLY SEQRES 9 A 305 ASP GLU CYS PHE LEU CYS ILE GLY ASN ASN ASN GLU ILE SEQRES 10 A 305 ARG GLU PHE CYS SER ILE HIS ARG SER SER LYS PRO SER SEQRES 11 A 305 ASP LYS THR VAL ILE GLY ASP ASN ASN LEU ILE MET GLY SEQRES 12 A 305 SER CYS HIS ILE ALA HIS ASP CYS LYS ILE GLY ASP ARG SEQRES 13 A 305 ASN ILE PHE ALA ASN ASN THR LEU LEU ALA GLY HIS VAL SEQRES 14 A 305 VAL VAL GLU ASP ASN THR HIS THR ALA GLY ALA SER VAL SEQRES 15 A 305 VAL HIS GLN PHE CYS HIS ILE GLY SER PHE ALA PHE ILE SEQRES 16 A 305 GLY GLY GLY SER VAL VAL SER GLN ASP VAL PRO LYS TYR SEQRES 17 A 305 MET MET VAL ALA GLY GLU ARG ALA GLU LEU ARG GLY LEU SEQRES 18 A 305 ASN LEU GLU GLY LEU ARG ARG ASN GLY PHE THR MET SER SEQRES 19 A 305 GLU MET LYS SER LEU ARG ALA ALA TYR ARG LYS ILE PHE SEQRES 20 A 305 MET SER THR GLU THR VAL SER LEU SER PHE GLU GLU ARG SEQRES 21 A 305 LEU THR GLU LEU GLU GLN ASP GLN GLU LEU TYR SER VAL SEQRES 22 A 305 PRO ALA VAL SER ALA MET LEU GLN SER ILE ARG ASP SER SEQRES 23 A 305 PHE THR GLU SER ARG ARG GLY ILE CYS LYS PHE ARG GLN SEQRES 24 A 305 TRP LEU ASP SER THR THR FORMUL 2 HOH *164(H2 O) HELIX 1 1 ASN A 253 ASN A 260 1 8 HELIX 2 2 THR A 263 MET A 279 1 17 HELIX 3 3 PHE A 288 ASP A 298 1 11 HELIX 4 4 ASP A 298 SER A 303 1 6 HELIX 5 5 VAL A 304 SER A 317 1 14 SHEET 1 A10 VAL A 46 VAL A 47 0 SHEET 2 A10 THR A 64 ILE A 65 1 O ILE A 65 N VAL A 46 SHEET 3 A10 HIS A 82 VAL A 83 1 O VAL A 83 N THR A 64 SHEET 4 A10 VAL A 100 VAL A 101 1 O VAL A 101 N HIS A 82 SHEET 5 A10 VAL A 122 VAL A 125 1 O VAL A 123 N VAL A 100 SHEET 6 A10 SER A 153 HIS A 155 1 O ILE A 154 N GLY A 124 SHEET 7 A10 HIS A 177 ILE A 178 1 O ILE A 178 N SER A 153 SHEET 8 A10 LEU A 195 LEU A 196 1 O LEU A 196 N HIS A 177 SHEET 9 A10 VAL A 213 VAL A 214 1 O VAL A 214 N LEU A 195 SHEET 10 A10 VAL A 231 VAL A 232 1 O VAL A 232 N VAL A 213 SHEET 1 B 9 VAL A 52 ILE A 53 0 SHEET 2 B 9 VAL A 69 LEU A 71 1 O VAL A 69 N VAL A 52 SHEET 3 B 9 THR A 87 LEU A 89 1 O THR A 87 N LYS A 70 SHEET 4 B 9 GLY A 107 ILE A 111 1 O ILE A 111 N GLU A 88 SHEET 5 B 9 CYS A 138 ILE A 142 1 O ILE A 142 N PHE A 110 SHEET 6 B 9 THR A 164 ILE A 166 1 O THR A 164 N CYS A 141 SHEET 7 B 9 LYS A 183 ILE A 184 1 O ILE A 184 N VAL A 165 SHEET 8 B 9 VAL A 201 VAL A 202 1 O VAL A 202 N LYS A 183 SHEET 9 B 9 HIS A 219 ILE A 220 1 O ILE A 220 N VAL A 201 SHEET 1 C11 SER A 58 VAL A 59 0 SHEET 2 C11 LYS A 76 LEU A 77 1 O LEU A 77 N SER A 58 SHEET 3 C11 VAL A 94 LEU A 95 1 O LEU A 95 N LYS A 76 SHEET 4 C11 ILE A 116 ILE A 117 1 O ILE A 117 N VAL A 94 SHEET 5 C11 GLU A 147 ILE A 148 1 O ILE A 148 N ILE A 116 SHEET 6 C11 LEU A 171 ILE A 172 1 O ILE A 172 N GLU A 147 SHEET 7 C11 ILE A 189 PHE A 190 1 O PHE A 190 N LEU A 171 SHEET 8 C11 HIS A 207 THR A 208 1 O THR A 208 N ILE A 189 SHEET 9 C11 PHE A 225 ILE A 226 1 O ILE A 226 N HIS A 207 SHEET 10 C11 MET A 240 ALA A 243 1 O VAL A 242 N PHE A 225 SHEET 11 C11 GLU A 248 LEU A 252 -1 O ARG A 250 N MET A 241 CRYST1 86.195 86.195 200.250 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011602 0.006698 0.000000 0.00000 SCALE2 0.000000 0.013396 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004994 0.00000