data_3T5L # _entry.id 3T5L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3T5L pdb_00003t5l 10.2210/pdb3t5l/pdb NDB NA1260 ? ? RCSB RCSB067065 ? ? WWPDB D_1000067065 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-15 2 'Structure model' 1 1 2013-01-09 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' pdbx_validate_polymer_linkage 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_conn_type 8 3 'Structure model' struct_ref_seq 9 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.value' 20 3 'Structure model' '_struct_conn.conn_type_id' 21 3 'Structure model' '_struct_conn.id' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 3 'Structure model' '_struct_conn_type.id' 39 3 'Structure model' '_struct_ref_seq.db_align_beg' 40 3 'Structure model' '_struct_ref_seq.db_align_end' 41 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 42 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 43 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3T5L _pdbx_database_status.recvd_initial_deposition_date 2011-07-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3T5H . unspecified PDB 3T5J . unspecified PDB 3T5K . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Banerjee, S.' 1 'Christov, P.P.' 2 'Kozekova, A.' 3 'Rizzo, C.J.' 4 'Stone, M.P.' 5 # _citation.id primary _citation.title ;Replication bypass of the trans-4-Hydroxynonenal-derived (6S,8R,11S)-1,N(2)-deoxyguanosine DNA adduct by the sulfolobus solfataricus DNA polymerase IV. ; _citation.journal_abbrev Chem.Res.Toxicol. _citation.journal_volume 25 _citation.page_first 422 _citation.page_last 435 _citation.year 2012 _citation.journal_id_ASTM CRTOEC _citation.country US _citation.journal_id_ISSN 0893-228X _citation.journal_id_CSD 2140 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22313351 _citation.pdbx_database_id_DOI 10.1021/tx200460j # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banerjee, S.' 1 ? primary 'Christov, P.P.' 2 ? primary 'Kozekova, A.' 3 ? primary 'Rizzo, C.J.' 4 ? primary 'Egli, M.' 5 ? primary 'Stone, M.P.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase IV' 39019.523 1 2.7.7.7 ? ? ? 2 polymer syn ;DNA (5'-D(*CP*AP*CP*(HN0)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') ; 5224.510 1 ? ? ? 'Modified DNA Template' 3 polymer syn ;DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') ; 4385.852 1 ? ? ? 'DNA Primer' 4 non-polymer syn "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 6 water nat water 18.015 110 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DA)(DC)(HN0)(DG)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DC)(DC)(DC)(DC)(DC)' CACXGAATCCTTCCCCC B ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DT)(DT)(DC)(DC)' GGGGGAAGGATTCC C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" DGT 5 'CALCIUM ION' CA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 VAL n 1 4 LEU n 1 5 PHE n 1 6 VAL n 1 7 ASP n 1 8 PHE n 1 9 ASP n 1 10 TYR n 1 11 PHE n 1 12 TYR n 1 13 ALA n 1 14 GLN n 1 15 VAL n 1 16 GLU n 1 17 GLU n 1 18 VAL n 1 19 LEU n 1 20 ASN n 1 21 PRO n 1 22 SER n 1 23 LEU n 1 24 LYS n 1 25 GLY n 1 26 LYS n 1 27 PRO n 1 28 VAL n 1 29 VAL n 1 30 VAL n 1 31 CYS n 1 32 VAL n 1 33 PHE n 1 34 SER n 1 35 GLY n 1 36 ARG n 1 37 PHE n 1 38 GLU n 1 39 ASP n 1 40 SER n 1 41 GLY n 1 42 ALA n 1 43 VAL n 1 44 ALA n 1 45 THR n 1 46 ALA n 1 47 ASN n 1 48 TYR n 1 49 GLU n 1 50 ALA n 1 51 ARG n 1 52 LYS n 1 53 PHE n 1 54 GLY n 1 55 VAL n 1 56 LYS n 1 57 ALA n 1 58 GLY n 1 59 ILE n 1 60 PRO n 1 61 ILE n 1 62 VAL n 1 63 GLU n 1 64 ALA n 1 65 LYS n 1 66 LYS n 1 67 ILE n 1 68 LEU n 1 69 PRO n 1 70 ASN n 1 71 ALA n 1 72 VAL n 1 73 TYR n 1 74 LEU n 1 75 PRO n 1 76 MET n 1 77 ARG n 1 78 LYS n 1 79 GLU n 1 80 VAL n 1 81 TYR n 1 82 GLN n 1 83 GLN n 1 84 VAL n 1 85 SER n 1 86 SER n 1 87 ARG n 1 88 ILE n 1 89 MET n 1 90 ASN n 1 91 LEU n 1 92 LEU n 1 93 ARG n 1 94 GLU n 1 95 TYR n 1 96 SER n 1 97 GLU n 1 98 LYS n 1 99 ILE n 1 100 GLU n 1 101 ILE n 1 102 ALA n 1 103 SER n 1 104 ILE n 1 105 ASP n 1 106 GLU n 1 107 ALA n 1 108 TYR n 1 109 LEU n 1 110 ASP n 1 111 ILE n 1 112 SER n 1 113 ASP n 1 114 LYS n 1 115 VAL n 1 116 ARG n 1 117 ASP n 1 118 TYR n 1 119 ARG n 1 120 GLU n 1 121 ALA n 1 122 TYR n 1 123 ASN n 1 124 LEU n 1 125 GLY n 1 126 LEU n 1 127 GLU n 1 128 ILE n 1 129 LYS n 1 130 ASN n 1 131 LYS n 1 132 ILE n 1 133 LEU n 1 134 GLU n 1 135 LYS n 1 136 GLU n 1 137 LYS n 1 138 ILE n 1 139 THR n 1 140 VAL n 1 141 THR n 1 142 VAL n 1 143 GLY n 1 144 ILE n 1 145 SER n 1 146 LYS n 1 147 ASN n 1 148 LYS n 1 149 VAL n 1 150 PHE n 1 151 ALA n 1 152 LYS n 1 153 ILE n 1 154 ALA n 1 155 ALA n 1 156 ASP n 1 157 MET n 1 158 ALA n 1 159 LYS n 1 160 PRO n 1 161 ASN n 1 162 GLY n 1 163 ILE n 1 164 LYS n 1 165 VAL n 1 166 ILE n 1 167 ASP n 1 168 ASP n 1 169 GLU n 1 170 GLU n 1 171 VAL n 1 172 LYS n 1 173 ARG n 1 174 LEU n 1 175 ILE n 1 176 ARG n 1 177 GLU n 1 178 LEU n 1 179 ASP n 1 180 ILE n 1 181 ALA n 1 182 ASP n 1 183 VAL n 1 184 PRO n 1 185 GLY n 1 186 ILE n 1 187 GLY n 1 188 ASN n 1 189 ILE n 1 190 THR n 1 191 ALA n 1 192 GLU n 1 193 LYS n 1 194 LEU n 1 195 LYS n 1 196 LYS n 1 197 LEU n 1 198 GLY n 1 199 ILE n 1 200 ASN n 1 201 LYS n 1 202 LEU n 1 203 VAL n 1 204 ASP n 1 205 THR n 1 206 LEU n 1 207 SER n 1 208 ILE n 1 209 GLU n 1 210 PHE n 1 211 ASP n 1 212 LYS n 1 213 LEU n 1 214 LYS n 1 215 GLY n 1 216 MET n 1 217 ILE n 1 218 GLY n 1 219 GLU n 1 220 ALA n 1 221 LYS n 1 222 ALA n 1 223 LYS n 1 224 TYR n 1 225 LEU n 1 226 ILE n 1 227 SER n 1 228 LEU n 1 229 ALA n 1 230 ARG n 1 231 ASP n 1 232 GLU n 1 233 TYR n 1 234 ASN n 1 235 GLU n 1 236 PRO n 1 237 ILE n 1 238 ARG n 1 239 THR n 1 240 ARG n 1 241 VAL n 1 242 ARG n 1 243 LYS n 1 244 SER n 1 245 ILE n 1 246 GLY n 1 247 ARG n 1 248 ILE n 1 249 VAL n 1 250 THR n 1 251 MET n 1 252 LYS n 1 253 ARG n 1 254 ASN n 1 255 SER n 1 256 ARG n 1 257 ASN n 1 258 LEU n 1 259 GLU n 1 260 GLU n 1 261 ILE n 1 262 LYS n 1 263 PRO n 1 264 TYR n 1 265 LEU n 1 266 PHE n 1 267 ARG n 1 268 ALA n 1 269 ILE n 1 270 GLU n 1 271 GLU n 1 272 SER n 1 273 TYR n 1 274 TYR n 1 275 LYS n 1 276 LEU n 1 277 ASP n 1 278 LYS n 1 279 ARG n 1 280 ILE n 1 281 PRO n 1 282 LYS n 1 283 ALA n 1 284 ILE n 1 285 HIS n 1 286 VAL n 1 287 VAL n 1 288 ALA n 1 289 VAL n 1 290 THR n 1 291 GLU n 1 292 ASP n 1 293 LEU n 1 294 ASP n 1 295 ILE n 1 296 VAL n 1 297 SER n 1 298 ARG n 1 299 GLY n 1 300 ARG n 1 301 THR n 1 302 PHE n 1 303 PRO n 1 304 HIS n 1 305 GLY n 1 306 ILE n 1 307 SER n 1 308 LYS n 1 309 GLU n 1 310 THR n 1 311 ALA n 1 312 TYR n 1 313 SER n 1 314 GLU n 1 315 SER n 1 316 VAL n 1 317 LYS n 1 318 LEU n 1 319 LEU n 1 320 GLN n 1 321 LYS n 1 322 ILE n 1 323 LEU n 1 324 GLU n 1 325 GLU n 1 326 ASP n 1 327 GLU n 1 328 ARG n 1 329 LYS n 1 330 ILE n 1 331 ARG n 1 332 ARG n 1 333 ILE n 1 334 GLY n 1 335 VAL n 1 336 ARG n 1 337 PHE n 1 338 SER n 1 339 LYS n 1 340 PHE n 1 341 ILE n 2 1 DC n 2 2 DA n 2 3 DC n 2 4 HN0 n 2 5 DG n 2 6 DA n 2 7 DA n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DC n 2 14 DC n 2 15 DC n 2 16 DC n 2 17 DC n 3 1 DG n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DA n 3 7 DA n 3 8 DG n 3 9 DG n 3 10 DA n 3 11 DT n 3 12 DT n 3 13 DC n 3 14 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dbh, dpo4, SSO2448' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 35092 / DSM 1617 / JCM 11322 / P2' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus P2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273057 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Synthetic construct' 3 1 sample ? ? ? ? ? 'Synthetic construct' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DGT non-polymer . "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HN0 'DNA linking' n ;2'-deoxy-N-[(2S,3S,5R)-5-hydroxy-2-pentyltetrahydrofuran-3-yl]guanosine 5'-(dihydrogen phosphate) ; ? 'C19 H30 N5 O9 P' 503.443 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 MET 76 76 76 MET MET A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 MET 89 89 89 MET MET A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 ASN 130 130 130 ASN ASN A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 LYS 193 193 193 LYS LYS A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 ASN 200 200 200 ASN ASN A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 SER 207 207 207 SER SER A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 PHE 210 210 210 PHE PHE A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 MET 216 216 216 MET MET A . n A 1 217 ILE 217 217 217 ILE ILE A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 LYS 221 221 221 LYS LYS A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 LYS 223 223 223 LYS LYS A . n A 1 224 TYR 224 224 224 TYR TYR A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 TYR 233 233 233 TYR TYR A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 PRO 236 236 236 PRO PRO A . n A 1 237 ILE 237 237 237 ILE ILE A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 THR 239 239 239 THR THR A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 VAL 241 241 241 VAL VAL A . n A 1 242 ARG 242 242 242 ARG ARG A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 SER 244 244 244 SER SER A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 ARG 247 247 247 ARG ARG A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 VAL 249 249 249 VAL VAL A . n A 1 250 THR 250 250 250 THR THR A . n A 1 251 MET 251 251 251 MET MET A . n A 1 252 LYS 252 252 252 LYS LYS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ASN 254 254 254 ASN ASN A . n A 1 255 SER 255 255 255 SER SER A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 LEU 258 258 258 LEU LEU A . n A 1 259 GLU 259 259 259 GLU GLU A . n A 1 260 GLU 260 260 260 GLU GLU A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 PRO 263 263 263 PRO PRO A . n A 1 264 TYR 264 264 264 TYR TYR A . n A 1 265 LEU 265 265 265 LEU LEU A . n A 1 266 PHE 266 266 266 PHE PHE A . n A 1 267 ARG 267 267 267 ARG ARG A . n A 1 268 ALA 268 268 268 ALA ALA A . n A 1 269 ILE 269 269 269 ILE ILE A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 GLU 271 271 271 GLU GLU A . n A 1 272 SER 272 272 272 SER SER A . n A 1 273 TYR 273 273 273 TYR TYR A . n A 1 274 TYR 274 274 274 TYR TYR A . n A 1 275 LYS 275 275 275 LYS LYS A . n A 1 276 LEU 276 276 276 LEU LEU A . n A 1 277 ASP 277 277 277 ASP ASP A . n A 1 278 LYS 278 278 278 LYS LYS A . n A 1 279 ARG 279 279 279 ARG ARG A . n A 1 280 ILE 280 280 280 ILE ILE A . n A 1 281 PRO 281 281 281 PRO PRO A . n A 1 282 LYS 282 282 282 LYS LYS A . n A 1 283 ALA 283 283 283 ALA ALA A . n A 1 284 ILE 284 284 284 ILE ILE A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 VAL 286 286 286 VAL VAL A . n A 1 287 VAL 287 287 287 VAL VAL A . n A 1 288 ALA 288 288 288 ALA ALA A . n A 1 289 VAL 289 289 289 VAL VAL A . n A 1 290 THR 290 290 290 THR THR A . n A 1 291 GLU 291 291 291 GLU GLU A . n A 1 292 ASP 292 292 292 ASP ASP A . n A 1 293 LEU 293 293 293 LEU LEU A . n A 1 294 ASP 294 294 294 ASP ASP A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 VAL 296 296 296 VAL VAL A . n A 1 297 SER 297 297 297 SER SER A . n A 1 298 ARG 298 298 298 ARG ARG A . n A 1 299 GLY 299 299 299 GLY GLY A . n A 1 300 ARG 300 300 300 ARG ARG A . n A 1 301 THR 301 301 301 THR THR A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 PRO 303 303 303 PRO PRO A . n A 1 304 HIS 304 304 304 HIS HIS A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 ILE 306 306 306 ILE ILE A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 LYS 308 308 308 LYS LYS A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 THR 310 310 310 THR THR A . n A 1 311 ALA 311 311 311 ALA ALA A . n A 1 312 TYR 312 312 312 TYR TYR A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 VAL 316 316 316 VAL VAL A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 LEU 319 319 319 LEU LEU A . n A 1 320 GLN 320 320 320 GLN GLN A . n A 1 321 LYS 321 321 321 LYS LYS A . n A 1 322 ILE 322 322 322 ILE ILE A . n A 1 323 LEU 323 323 323 LEU LEU A . n A 1 324 GLU 324 324 324 GLU GLU A . n A 1 325 GLU 325 325 325 GLU GLU A . n A 1 326 ASP 326 326 326 ASP ASP A . n A 1 327 GLU 327 327 327 GLU GLU A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 LYS 329 329 329 LYS LYS A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 ARG 332 332 332 ARG ARG A . n A 1 333 ILE 333 333 333 ILE ILE A . n A 1 334 GLY 334 334 334 GLY GLY A . n A 1 335 VAL 335 335 335 VAL VAL A . n A 1 336 ARG 336 336 336 ARG ARG A . n A 1 337 PHE 337 337 337 PHE PHE A . n A 1 338 SER 338 338 338 SER SER A . n A 1 339 LYS 339 339 339 LYS LYS A . n A 1 340 PHE 340 340 340 PHE PHE A . n A 1 341 ILE 341 341 341 ILE ILE A . n B 2 1 DC 1 402 402 DC DC B . n B 2 2 DA 2 403 403 DA DA B . n B 2 3 DC 3 404 404 DC DC B . n B 2 4 HN0 4 405 405 HN0 HN0 B . n B 2 5 DG 5 406 406 DG DG B . n B 2 6 DA 6 407 407 DA DA B . n B 2 7 DA 7 408 408 DA DA B . n B 2 8 DT 8 409 409 DT DT B . n B 2 9 DC 9 410 410 DC DC B . n B 2 10 DC 10 411 411 DC DC B . n B 2 11 DT 11 412 412 DT DT B . n B 2 12 DT 12 413 413 DT DT B . n B 2 13 DC 13 414 414 DC DC B . n B 2 14 DC 14 415 415 DC DC B . n B 2 15 DC 15 416 416 DC DC B . n B 2 16 DC 16 417 417 DC DC B . n B 2 17 DC 17 418 418 DC DC B . n C 3 1 DG 1 501 501 DG DG C . n C 3 2 DG 2 502 502 DG DG C . n C 3 3 DG 3 503 503 DG DG C . n C 3 4 DG 4 504 504 DG DG C . n C 3 5 DG 5 505 505 DG DG C . n C 3 6 DA 6 506 506 DA DA C . n C 3 7 DA 7 507 507 DA DA C . n C 3 8 DG 8 508 508 DG DG C . n C 3 9 DG 9 509 509 DG DG C . n C 3 10 DA 10 510 510 DA DA C . n C 3 11 DT 11 511 511 DT DT C . n C 3 12 DT 12 512 512 DT DT C . n C 3 13 DC 13 513 513 DC DC C . n C 3 14 DC 14 514 514 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DGT 1 600 600 DGT DGT A . E 5 CA 1 1001 1001 CA CA A . F 5 CA 1 1002 1002 CA CA A . G 5 CA 1 1003 1003 CA CA A . H 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 2 2003 2003 HOH HOH A . H 6 HOH 3 2005 2005 HOH HOH A . H 6 HOH 4 2006 2006 HOH HOH A . H 6 HOH 5 2009 2009 HOH HOH A . H 6 HOH 6 2011 2011 HOH HOH A . H 6 HOH 7 2012 2012 HOH HOH A . H 6 HOH 8 2015 2015 HOH HOH A . H 6 HOH 9 2016 2016 HOH HOH A . H 6 HOH 10 2017 2017 HOH HOH A . H 6 HOH 11 2018 2018 HOH HOH A . H 6 HOH 12 2019 2019 HOH HOH A . H 6 HOH 13 2020 2020 HOH HOH A . H 6 HOH 14 2021 2021 HOH HOH A . H 6 HOH 15 2022 2022 HOH HOH A . H 6 HOH 16 2023 2023 HOH HOH A . H 6 HOH 17 2024 2024 HOH HOH A . H 6 HOH 18 2025 2025 HOH HOH A . H 6 HOH 19 2027 2027 HOH HOH A . H 6 HOH 20 2029 2029 HOH HOH A . H 6 HOH 21 2032 2032 HOH HOH A . H 6 HOH 22 2033 2033 HOH HOH A . H 6 HOH 23 2034 2034 HOH HOH A . H 6 HOH 24 2035 2035 HOH HOH A . H 6 HOH 25 2036 2036 HOH HOH A . H 6 HOH 26 2037 2037 HOH HOH A . H 6 HOH 27 2038 2038 HOH HOH A . H 6 HOH 28 2039 2039 HOH HOH A . H 6 HOH 29 2040 2040 HOH HOH A . H 6 HOH 30 2041 2041 HOH HOH A . H 6 HOH 31 2042 2042 HOH HOH A . H 6 HOH 32 2043 2043 HOH HOH A . H 6 HOH 33 2044 2044 HOH HOH A . H 6 HOH 34 2045 2045 HOH HOH A . H 6 HOH 35 2046 2046 HOH HOH A . H 6 HOH 36 2047 2047 HOH HOH A . H 6 HOH 37 2048 2048 HOH HOH A . H 6 HOH 38 2049 2049 HOH HOH A . H 6 HOH 39 2050 2050 HOH HOH A . H 6 HOH 40 2051 2051 HOH HOH A . H 6 HOH 41 2052 2052 HOH HOH A . H 6 HOH 42 2053 2053 HOH HOH A . H 6 HOH 43 2054 2054 HOH HOH A . H 6 HOH 44 2055 2055 HOH HOH A . H 6 HOH 45 2056 2056 HOH HOH A . H 6 HOH 46 2058 2058 HOH HOH A . H 6 HOH 47 2059 2059 HOH HOH A . H 6 HOH 48 2060 2060 HOH HOH A . H 6 HOH 49 2061 2061 HOH HOH A . H 6 HOH 50 2062 2062 HOH HOH A . H 6 HOH 51 2063 2063 HOH HOH A . H 6 HOH 52 2064 2064 HOH HOH A . H 6 HOH 53 2065 2065 HOH HOH A . H 6 HOH 54 2066 2066 HOH HOH A . H 6 HOH 55 2067 2067 HOH HOH A . H 6 HOH 56 2070 2070 HOH HOH A . H 6 HOH 57 2071 2071 HOH HOH A . H 6 HOH 58 2072 2072 HOH HOH A . H 6 HOH 59 2073 2073 HOH HOH A . H 6 HOH 60 2074 2074 HOH HOH A . H 6 HOH 61 2075 2075 HOH HOH A . H 6 HOH 62 2076 2076 HOH HOH A . H 6 HOH 63 2077 2077 HOH HOH A . H 6 HOH 64 2078 2078 HOH HOH A . H 6 HOH 65 2079 2079 HOH HOH A . H 6 HOH 66 2085 2085 HOH HOH A . H 6 HOH 67 2086 2086 HOH HOH A . H 6 HOH 68 2090 2090 HOH HOH A . H 6 HOH 69 2096 2096 HOH HOH A . H 6 HOH 70 2097 2097 HOH HOH A . H 6 HOH 71 2098 2098 HOH HOH A . H 6 HOH 72 2102 2102 HOH HOH A . H 6 HOH 73 2104 2104 HOH HOH A . H 6 HOH 74 2105 2105 HOH HOH A . H 6 HOH 75 2106 2106 HOH HOH A . H 6 HOH 76 2107 2107 HOH HOH A . H 6 HOH 77 2108 2108 HOH HOH A . H 6 HOH 78 2109 2109 HOH HOH A . H 6 HOH 79 2110 2110 HOH HOH A . H 6 HOH 80 2111 2111 HOH HOH A . I 6 HOH 1 2007 2007 HOH HOH B . I 6 HOH 2 2010 2010 HOH HOH B . I 6 HOH 3 2026 2026 HOH HOH B . I 6 HOH 4 2028 2028 HOH HOH B . I 6 HOH 5 2030 2030 HOH HOH B . I 6 HOH 6 2031 2031 HOH HOH B . I 6 HOH 7 2057 2057 HOH HOH B . I 6 HOH 8 2068 2068 HOH HOH B . I 6 HOH 9 2080 2080 HOH HOH B . I 6 HOH 10 2081 2081 HOH HOH B . I 6 HOH 11 2082 2082 HOH HOH B . I 6 HOH 12 2087 2087 HOH HOH B . I 6 HOH 13 2088 2088 HOH HOH B . I 6 HOH 14 2089 2089 HOH HOH B . I 6 HOH 15 2094 2094 HOH HOH B . I 6 HOH 16 2095 2095 HOH HOH B . I 6 HOH 17 2100 2100 HOH HOH B . J 6 HOH 1 2002 2002 HOH HOH C . J 6 HOH 2 2004 2004 HOH HOH C . J 6 HOH 3 2013 2013 HOH HOH C . J 6 HOH 4 2014 2014 HOH HOH C . J 6 HOH 5 2069 2069 HOH HOH C . J 6 HOH 6 2083 2083 HOH HOH C . J 6 HOH 7 2084 2084 HOH HOH C . J 6 HOH 8 2091 2091 HOH HOH C . J 6 HOH 9 2092 2092 HOH HOH C . J 6 HOH 10 2093 2093 HOH HOH C . J 6 HOH 11 2099 2099 HOH HOH C . J 6 HOH 12 2101 2101 HOH HOH C . J 6 HOH 13 2103 2103 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 CNS refinement . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 3T5L _cell.length_a 95.124 _cell.length_b 103.716 _cell.length_c 52.816 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3T5L _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3T5L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 54.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;50 mM Tris-HCl (pH 7.4 at 25 C) buffer, 12 20% polyethylene glycol 3350 (w/v), 100 mM Ca(OAc)2, and 2.5% glycerol (v/v). , VAPOR DIFFUSION, temperature 298K ; # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.08 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.08 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3T5L _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.6 _reflns.number_obs ? _reflns.number_all 16566 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 35.0 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3T5L _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11955 _refine.ls_number_reflns_all 16566 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 161352.52 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.19 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 98.8 _refine.ls_R_factor_obs 0.204 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.204 _refine.ls_R_factor_R_free 0.255 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 1167 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 48.0 _refine.aniso_B[1][1] 9.55 _refine.aniso_B[2][2] -4.33 _refine.aniso_B[3][3] -5.22 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.313796 _refine.solvent_model_param_bsol 21.6468 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'RESOLUTION-DEPENDENT WEIGHTING SCHEME USE OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3T5L _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.29 _refine_analyze.Luzzati_d_res_low_obs 50.00 _refine_analyze.Luzzati_coordinate_error_free 0.46 _refine_analyze.Luzzati_sigma_a_free 0.42 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2744 _refine_hist.pdbx_number_atoms_nucleic_acid 638 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 110 _refine_hist.number_atoms_total 3526 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 27.19 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.19 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.41 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.49 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.20 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.69 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.90 _refine_ls_shell.d_res_low 3.08 _refine_ls_shell.number_reflns_R_work 1731 _refine_ls_shell.R_factor_R_work 0.318 _refine_ls_shell.percent_reflns_obs 97.4 _refine_ls_shell.R_factor_R_free 0.406 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 9.6 _refine_ls_shell.number_reflns_R_free 183 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_hne.param dna-rna_hne.top 'X-RAY DIFFRACTION' 3 dgtp.param dgtp.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 water_rep.param water.top # _database_PDB_matrix.entry_id 3T5L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3T5L _struct.title ;Ternary complex of HNE Adduct modified DNA (5'-CXG-3' vs 14-mer) with Dpo4 and incoming dDGT ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3T5L _struct_keywords.pdbx_keywords DNA/Transferase _struct_keywords.text 'Ternary complex of Dpo4-DNA-dGTP, DNA Polymerase, HNE, DNA-Transferase complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? # loop_ _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 Q97W02 1 UNP DPO4_SULSO 1 ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; ? 2 3T5L 2 PDB 3T5L 1 CACGGAATCCTTCCCCC ? 3 3T5L 3 PDB 3T5L 1 GGGGGAAGGATTCC ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3T5L A 1 ? 341 ? Q97W02 1 ? 341 ? 1 341 2 2 3T5L B 1 ? 17 ? 3T5L 402 ? 418 ? 402 418 3 3 3T5L C 1 ? 14 ? 3T5L 501 ? 514 ? 501 514 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5940 ? 1 MORE -72 ? 1 'SSA (A^2)' 19920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 10 ? LEU A 19 ? TYR A 10 LEU A 19 1 ? 10 HELX_P HELX_P2 2 ASN A 20 ? LYS A 24 ? ASN A 20 LYS A 24 5 ? 5 HELX_P HELX_P3 3 ASN A 47 ? LYS A 52 ? ASN A 47 LYS A 52 1 ? 6 HELX_P HELX_P4 4 PRO A 60 ? LEU A 68 ? PRO A 60 LEU A 68 1 ? 9 HELX_P HELX_P5 5 ARG A 77 ? GLU A 94 ? ARG A 77 GLU A 94 1 ? 18 HELX_P HELX_P6 6 ASP A 117 ? LYS A 137 ? ASP A 117 LYS A 137 1 ? 21 HELX_P HELX_P7 7 ASN A 147 ? LYS A 159 ? ASN A 147 LYS A 159 1 ? 13 HELX_P HELX_P8 8 ASP A 167 ? LEU A 178 ? ASP A 167 LEU A 178 1 ? 12 HELX_P HELX_P9 9 ASP A 179 ? VAL A 183 ? ASP A 179 VAL A 183 5 ? 5 HELX_P HELX_P10 10 GLY A 187 ? LEU A 197 ? GLY A 187 LEU A 197 1 ? 11 HELX_P HELX_P11 11 LYS A 201 ? SER A 207 ? LYS A 201 SER A 207 5 ? 7 HELX_P HELX_P12 12 GLU A 209 ? GLY A 218 ? GLU A 209 GLY A 218 1 ? 10 HELX_P HELX_P13 13 GLY A 218 ? ARG A 230 ? GLY A 218 ARG A 230 1 ? 13 HELX_P HELX_P14 14 ASN A 257 ? ASP A 277 ? ASN A 257 ASP A 277 1 ? 21 HELX_P HELX_P15 15 SER A 307 ? ASP A 326 ? SER A 307 ASP A 326 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 3 "O3'" ? ? ? 1_555 B HN0 4 P ? ? B DC 404 B HN0 405 1_555 ? ? ? ? ? ? ? 1.603 ? ? metalc1 metalc ? ? A ASP 7 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 7 A CA 1001 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc2 metalc ? ? A ASP 7 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 7 A CA 1002 1_555 ? ? ? ? ? ? ? 2.991 ? ? metalc3 metalc ? ? A PHE 8 O ? ? ? 1_555 E CA . CA ? ? A PHE 8 A CA 1001 1_555 ? ? ? ? ? ? ? 2.508 ? ? metalc4 metalc ? ? A ASP 105 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 105 A CA 1001 1_555 ? ? ? ? ? ? ? 2.566 ? ? metalc5 metalc ? ? A GLU 106 OE1 ? ? ? 1_555 F CA . CA ? ? A GLU 106 A CA 1002 1_555 ? ? ? ? ? ? ? 2.607 ? ? metalc6 metalc ? ? A ALA 181 O ? ? ? 1_555 G CA . CA ? ? A ALA 181 A CA 1003 1_555 ? ? ? ? ? ? ? 2.538 ? ? metalc7 metalc ? ? A ILE 186 O ? ? ? 1_555 G CA . CA ? ? A ILE 186 A CA 1003 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc8 metalc ? ? D DGT . O3A ? ? ? 1_555 E CA . CA ? ? A DGT 600 A CA 1001 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc9 metalc ? ? D DGT . O2G ? ? ? 1_555 E CA . CA ? ? A DGT 600 A CA 1001 1_555 ? ? ? ? ? ? ? 3.022 ? ? metalc10 metalc ? ? D DGT . O2B ? ? ? 1_555 E CA . CA ? ? A DGT 600 A CA 1001 1_555 ? ? ? ? ? ? ? 3.035 ? ? metalc11 metalc ? ? D DGT . "O5'" ? ? ? 1_555 E CA . CA ? ? A DGT 600 A CA 1001 1_555 ? ? ? ? ? ? ? 3.197 ? ? metalc12 metalc ? ? D DGT . O2A ? ? ? 1_555 F CA . CA ? ? A DGT 600 A CA 1002 1_555 ? ? ? ? ? ? ? 3.067 ? ? metalc13 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1001 A HOH 2102 1_555 ? ? ? ? ? ? ? 2.716 ? ? metalc14 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1002 A HOH 2086 1_555 ? ? ? ? ? ? ? 2.770 ? ? metalc15 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1002 A HOH 2102 1_555 ? ? ? ? ? ? ? 2.933 ? ? metalc16 metalc ? ? F CA . CA ? ? ? 1_555 C DC 14 OP1 ? ? A CA 1002 C DC 514 1_555 ? ? ? ? ? ? ? 2.974 ? ? metalc17 metalc ? ? G CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1003 A HOH 2001 1_555 ? ? ? ? ? ? ? 2.617 ? ? metalc18 metalc ? ? G CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1003 A HOH 2003 1_555 ? ? ? ? ? ? ? 2.740 ? ? metalc19 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 1003 C HOH 2002 1_555 ? ? ? ? ? ? ? 2.824 ? ? metalc20 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 1003 C HOH 2004 1_555 ? ? ? ? ? ? ? 2.755 ? ? hydrog1 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 406 C DC 513 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 13 O2 ? ? B DG 406 C DC 513 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 13 N4 ? ? B DG 406 C DC 513 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 407 C DT 512 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 12 O4 ? ? B DA 407 C DT 512 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 408 C DT 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 408 C DT 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 409 C DA 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 409 C DA 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 410 C DG 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 410 C DG 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 410 C DG 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 411 C DG 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 411 C DG 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 411 C DG 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 412 C DA 507 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 412 C DA 507 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 413 C DA 506 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 413 C DA 506 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 414 C DG 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 414 C DG 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 414 C DG 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 415 C DG 504 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 415 C DG 504 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 415 C DG 504 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 416 C DG 503 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 416 C DG 503 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 416 C DG 503 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 417 C DG 502 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 417 C DG 502 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 417 C DG 502 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 17 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 418 C DG 501 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 17 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 418 C DG 501 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 17 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 418 C DG 501 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? A PHE 8 ? A PHE 8 ? 1_555 88.6 ? 2 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 71.3 ? 3 O ? A PHE 8 ? A PHE 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 84.5 ? 4 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D DGT . ? A DGT 600 ? 1_555 139.2 ? 5 O ? A PHE 8 ? A PHE 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D DGT . ? A DGT 600 ? 1_555 130.2 ? 6 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D DGT . ? A DGT 600 ? 1_555 97.4 ? 7 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2G ? D DGT . ? A DGT 600 ? 1_555 136.9 ? 8 O ? A PHE 8 ? A PHE 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2G ? D DGT . ? A DGT 600 ? 1_555 68.4 ? 9 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2G ? D DGT . ? A DGT 600 ? 1_555 137.2 ? 10 O3A ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2G ? D DGT . ? A DGT 600 ? 1_555 77.9 ? 11 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D DGT . ? A DGT 600 ? 1_555 163.0 ? 12 O ? A PHE 8 ? A PHE 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D DGT . ? A DGT 600 ? 1_555 82.5 ? 13 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D DGT . ? A DGT 600 ? 1_555 93.3 ? 14 O3A ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D DGT . ? A DGT 600 ? 1_555 47.7 ? 15 O2G ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D DGT . ? A DGT 600 ? 1_555 52.0 ? 16 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 "O5'" ? D DGT . ? A DGT 600 ? 1_555 110.9 ? 17 O ? A PHE 8 ? A PHE 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 "O5'" ? D DGT . ? A DGT 600 ? 1_555 124.9 ? 18 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 "O5'" ? D DGT . ? A DGT 600 ? 1_555 57.4 ? 19 O3A ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 "O5'" ? D DGT . ? A DGT 600 ? 1_555 40.7 ? 20 O2G ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 "O5'" ? D DGT . ? A DGT 600 ? 1_555 112.1 ? 21 O2B ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 "O5'" ? D DGT . ? A DGT 600 ? 1_555 63.8 ? 22 OD1 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 86.6 ? 23 O ? A PHE 8 ? A PHE 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 134.0 ? 24 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 135.8 ? 25 O3A ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 74.8 ? 26 O2G ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 84.7 ? 27 O2B ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 110.0 ? 28 "O5'" ? D DGT . ? A DGT 600 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 99.4 ? 29 OD2 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OE1 ? A GLU 106 ? A GLU 106 ? 1_555 98.6 ? 30 OD2 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O2A ? D DGT . ? A DGT 600 ? 1_555 96.4 ? 31 OE1 ? A GLU 106 ? A GLU 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O2A ? D DGT . ? A DGT 600 ? 1_555 94.0 ? 32 OD2 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2086 ? 1_555 75.9 ? 33 OE1 ? A GLU 106 ? A GLU 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2086 ? 1_555 54.9 ? 34 O2A ? D DGT . ? A DGT 600 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2086 ? 1_555 48.9 ? 35 OD2 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 51.7 ? 36 OE1 ? A GLU 106 ? A GLU 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 136.5 ? 37 O2A ? D DGT . ? A DGT 600 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 64.1 ? 38 O ? H HOH . ? A HOH 2086 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O ? H HOH . ? A HOH 2102 ? 1_555 84.6 ? 39 OD2 ? A ASP 7 ? A ASP 7 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 157.4 ? 40 OE1 ? A GLU 106 ? A GLU 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 69.2 ? 41 O2A ? D DGT . ? A DGT 600 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 103.2 ? 42 O ? H HOH . ? A HOH 2086 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 109.0 ? 43 O ? H HOH . ? A HOH 2102 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OP1 ? C DC 14 ? C DC 514 ? 1_555 148.9 ? 44 O ? A ALA 181 ? A ALA 181 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? A ILE 186 ? A ILE 186 ? 1_555 80.8 ? 45 O ? A ALA 181 ? A ALA 181 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? H HOH . ? A HOH 2001 ? 1_555 92.5 ? 46 O ? A ILE 186 ? A ILE 186 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? H HOH . ? A HOH 2001 ? 1_555 160.1 ? 47 O ? A ALA 181 ? A ALA 181 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? H HOH . ? A HOH 2003 ? 1_555 80.0 ? 48 O ? A ILE 186 ? A ILE 186 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? H HOH . ? A HOH 2003 ? 1_555 57.6 ? 49 O ? H HOH . ? A HOH 2001 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? H HOH . ? A HOH 2003 ? 1_555 139.9 ? 50 O ? A ALA 181 ? A ALA 181 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2002 ? 1_555 78.5 ? 51 O ? A ILE 186 ? A ILE 186 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2002 ? 1_555 76.2 ? 52 O ? H HOH . ? A HOH 2001 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2002 ? 1_555 84.1 ? 53 O ? H HOH . ? A HOH 2003 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2002 ? 1_555 131.4 ? 54 O ? A ALA 181 ? A ALA 181 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2004 ? 1_555 165.0 ? 55 O ? A ILE 186 ? A ILE 186 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2004 ? 1_555 98.3 ? 56 O ? H HOH . ? A HOH 2001 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2004 ? 1_555 83.4 ? 57 O ? H HOH . ? A HOH 2003 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2004 ? 1_555 112.3 ? 58 O ? J HOH . ? C HOH 2002 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? J HOH . ? C HOH 2004 ? 1_555 86.7 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 159 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 159 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 160 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 160 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.27 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 99 ? ILE A 101 ? ILE A 99 ILE A 101 A 2 GLU A 106 ? ASP A 110 ? GLU A 106 ASP A 110 A 3 VAL A 3 ? PHE A 8 ? VAL A 3 PHE A 8 A 4 VAL A 140 ? SER A 145 ? VAL A 140 SER A 145 A 5 ILE A 163 ? VAL A 165 ? ILE A 163 VAL A 165 B 1 GLY A 41 ? ALA A 46 ? GLY A 41 ALA A 46 B 2 VAL A 28 ? PHE A 33 ? VAL A 28 PHE A 33 B 3 VAL A 72 ? PRO A 75 ? VAL A 72 PRO A 75 C 1 SER A 244 ? SER A 255 ? SER A 244 SER A 255 C 2 ILE A 330 ? PHE A 340 ? ILE A 330 PHE A 340 C 3 PRO A 281 ? THR A 290 ? PRO A 281 THR A 290 C 4 ILE A 295 ? THR A 301 ? ILE A 295 THR A 301 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 100 ? N GLU A 100 O TYR A 108 ? O TYR A 108 A 2 3 O LEU A 109 ? O LEU A 109 N LEU A 4 ? N LEU A 4 A 3 4 N PHE A 5 ? N PHE A 5 O GLY A 143 ? O GLY A 143 A 4 5 N ILE A 144 ? N ILE A 144 O LYS A 164 ? O LYS A 164 B 1 2 O ALA A 42 ? O ALA A 42 N VAL A 32 ? N VAL A 32 B 2 3 N CYS A 31 ? N CYS A 31 O LEU A 74 ? O LEU A 74 C 1 2 N ILE A 245 ? N ILE A 245 O PHE A 337 ? O PHE A 337 C 2 3 O ARG A 331 ? O ARG A 331 N VAL A 289 ? N VAL A 289 C 3 4 N ALA A 288 ? N ALA A 288 O VAL A 296 ? O VAL A 296 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DGT 600 ? 23 'BINDING SITE FOR RESIDUE DGT A 600' AC2 Software A CA 1001 ? 5 'BINDING SITE FOR RESIDUE CA A 1001' AC3 Software A CA 1002 ? 7 'BINDING SITE FOR RESIDUE CA A 1002' AC4 Software A CA 1003 ? 6 'BINDING SITE FOR RESIDUE CA A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 PHE A 8 ? PHE A 8 . ? 1_555 ? 2 AC1 23 ASP A 9 ? ASP A 9 . ? 1_555 ? 3 AC1 23 TYR A 10 ? TYR A 10 . ? 1_555 ? 4 AC1 23 PHE A 11 ? PHE A 11 . ? 1_555 ? 5 AC1 23 TYR A 12 ? TYR A 12 . ? 1_555 ? 6 AC1 23 ALA A 44 ? ALA A 44 . ? 1_555 ? 7 AC1 23 THR A 45 ? THR A 45 . ? 1_555 ? 8 AC1 23 TYR A 48 ? TYR A 48 . ? 1_555 ? 9 AC1 23 ARG A 51 ? ARG A 51 . ? 1_555 ? 10 AC1 23 ASP A 105 ? ASP A 105 . ? 1_555 ? 11 AC1 23 LYS A 159 ? LYS A 159 . ? 1_555 ? 12 AC1 23 CA E . ? CA A 1001 . ? 1_555 ? 13 AC1 23 CA F . ? CA A 1002 . ? 1_555 ? 14 AC1 23 HOH H . ? HOH A 2005 . ? 1_555 ? 15 AC1 23 HOH H . ? HOH A 2006 . ? 1_555 ? 16 AC1 23 HOH H . ? HOH A 2011 . ? 1_555 ? 17 AC1 23 HOH H . ? HOH A 2086 . ? 1_555 ? 18 AC1 23 HOH H . ? HOH A 2096 . ? 1_555 ? 19 AC1 23 HOH H . ? HOH A 2097 . ? 1_555 ? 20 AC1 23 HOH H . ? HOH A 2102 . ? 1_555 ? 21 AC1 23 DC B 3 ? DC B 404 . ? 1_555 ? 22 AC1 23 HN0 B 4 ? HN0 B 405 . ? 1_555 ? 23 AC1 23 DC C 14 ? DC C 514 . ? 1_555 ? 24 AC2 5 ASP A 7 ? ASP A 7 . ? 1_555 ? 25 AC2 5 PHE A 8 ? PHE A 8 . ? 1_555 ? 26 AC2 5 ASP A 105 ? ASP A 105 . ? 1_555 ? 27 AC2 5 DGT D . ? DGT A 600 . ? 1_555 ? 28 AC2 5 HOH H . ? HOH A 2102 . ? 1_555 ? 29 AC3 7 ASP A 7 ? ASP A 7 . ? 1_555 ? 30 AC3 7 GLU A 106 ? GLU A 106 . ? 1_555 ? 31 AC3 7 LYS A 152 ? LYS A 152 . ? 1_555 ? 32 AC3 7 DGT D . ? DGT A 600 . ? 1_555 ? 33 AC3 7 HOH H . ? HOH A 2086 . ? 1_555 ? 34 AC3 7 HOH H . ? HOH A 2102 . ? 1_555 ? 35 AC3 7 DC C 14 ? DC C 514 . ? 1_555 ? 36 AC4 6 ALA A 181 ? ALA A 181 . ? 1_555 ? 37 AC4 6 ILE A 186 ? ILE A 186 . ? 1_555 ? 38 AC4 6 HOH H . ? HOH A 2001 . ? 1_555 ? 39 AC4 6 HOH H . ? HOH A 2003 . ? 1_555 ? 40 AC4 6 HOH J . ? HOH C 2002 . ? 1_555 ? 41 AC4 6 HOH J . ? HOH C 2004 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 10 ? ? 20.54 48.21 2 1 ASN A 20 ? ? -162.42 73.87 3 1 GLU A 94 ? ? -76.18 40.10 4 1 TYR A 95 ? ? -151.91 -6.48 5 1 SER A 96 ? ? 175.84 143.02 6 1 ASP A 113 ? ? -68.36 -74.10 7 1 LYS A 114 ? ? -35.12 -76.13 8 1 SER A 145 ? ? -160.52 -165.91 9 1 SER A 207 ? ? -96.27 44.20 10 1 ASN A 234 ? ? -165.23 60.26 11 1 ASP A 277 ? ? 32.10 88.15 12 1 LYS A 278 ? ? 86.54 -28.13 13 1 ASP A 292 ? ? -97.22 40.94 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 "C3'" _pdbx_validate_polymer_linkage.auth_asym_id_1 B _pdbx_validate_polymer_linkage.auth_comp_id_1 HN0 _pdbx_validate_polymer_linkage.auth_seq_id_1 405 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 P _pdbx_validate_polymer_linkage.auth_asym_id_2 B _pdbx_validate_polymer_linkage.auth_comp_id_2 DG _pdbx_validate_polymer_linkage.auth_seq_id_2 406 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 2.62 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id HN0 _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id HN0 _pdbx_struct_mod_residue.auth_seq_id 405 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DGT PG P N N 196 DGT O1G O N N 197 DGT O2G O N N 198 DGT O3G O N N 199 DGT O3B O N N 200 DGT PB P N S 201 DGT O1B O N N 202 DGT O2B O N N 203 DGT O3A O N N 204 DGT PA P N R 205 DGT O1A O N N 206 DGT O2A O N N 207 DGT "O5'" O N N 208 DGT "C5'" C N N 209 DGT "C4'" C N R 210 DGT "O4'" O N N 211 DGT "C3'" C N S 212 DGT "O3'" O N N 213 DGT "C2'" C N N 214 DGT "C1'" C N R 215 DGT N9 N Y N 216 DGT C8 C Y N 217 DGT N7 N Y N 218 DGT C5 C Y N 219 DGT C6 C N N 220 DGT O6 O N N 221 DGT N1 N N N 222 DGT C2 C N N 223 DGT N2 N N N 224 DGT N3 N N N 225 DGT C4 C Y N 226 DGT HO1G H N N 227 DGT HO2G H N N 228 DGT HO1B H N N 229 DGT HO1A H N N 230 DGT "H5'" H N N 231 DGT "H5'A" H N N 232 DGT "H4'" H N N 233 DGT "H3'" H N N 234 DGT "HO3'" H N N 235 DGT "H2'" H N N 236 DGT "H2'A" H N N 237 DGT "H1'" H N N 238 DGT H8 H N N 239 DGT HN2 H N N 240 DGT HN2A H N N 241 DGT H16 H N N 242 DT OP3 O N N 243 DT P P N N 244 DT OP1 O N N 245 DT OP2 O N N 246 DT "O5'" O N N 247 DT "C5'" C N N 248 DT "C4'" C N R 249 DT "O4'" O N N 250 DT "C3'" C N S 251 DT "O3'" O N N 252 DT "C2'" C N N 253 DT "C1'" C N R 254 DT N1 N N N 255 DT C2 C N N 256 DT O2 O N N 257 DT N3 N N N 258 DT C4 C N N 259 DT O4 O N N 260 DT C5 C N N 261 DT C7 C N N 262 DT C6 C N N 263 DT HOP3 H N N 264 DT HOP2 H N N 265 DT "H5'" H N N 266 DT "H5''" H N N 267 DT "H4'" H N N 268 DT "H3'" H N N 269 DT "HO3'" H N N 270 DT "H2'" H N N 271 DT "H2''" H N N 272 DT "H1'" H N N 273 DT H3 H N N 274 DT H71 H N N 275 DT H72 H N N 276 DT H73 H N N 277 DT H6 H N N 278 GLN N N N N 279 GLN CA C N S 280 GLN C C N N 281 GLN O O N N 282 GLN CB C N N 283 GLN CG C N N 284 GLN CD C N N 285 GLN OE1 O N N 286 GLN NE2 N N N 287 GLN OXT O N N 288 GLN H H N N 289 GLN H2 H N N 290 GLN HA H N N 291 GLN HB2 H N N 292 GLN HB3 H N N 293 GLN HG2 H N N 294 GLN HG3 H N N 295 GLN HE21 H N N 296 GLN HE22 H N N 297 GLN HXT H N N 298 GLU N N N N 299 GLU CA C N S 300 GLU C C N N 301 GLU O O N N 302 GLU CB C N N 303 GLU CG C N N 304 GLU CD C N N 305 GLU OE1 O N N 306 GLU OE2 O N N 307 GLU OXT O N N 308 GLU H H N N 309 GLU H2 H N N 310 GLU HA H N N 311 GLU HB2 H N N 312 GLU HB3 H N N 313 GLU HG2 H N N 314 GLU HG3 H N N 315 GLU HE2 H N N 316 GLU HXT H N N 317 GLY N N N N 318 GLY CA C N N 319 GLY C C N N 320 GLY O O N N 321 GLY OXT O N N 322 GLY H H N N 323 GLY H2 H N N 324 GLY HA2 H N N 325 GLY HA3 H N N 326 GLY HXT H N N 327 HIS N N N N 328 HIS CA C N S 329 HIS C C N N 330 HIS O O N N 331 HIS CB C N N 332 HIS CG C Y N 333 HIS ND1 N Y N 334 HIS CD2 C Y N 335 HIS CE1 C Y N 336 HIS NE2 N Y N 337 HIS OXT O N N 338 HIS H H N N 339 HIS H2 H N N 340 HIS HA H N N 341 HIS HB2 H N N 342 HIS HB3 H N N 343 HIS HD1 H N N 344 HIS HD2 H N N 345 HIS HE1 H N N 346 HIS HE2 H N N 347 HIS HXT H N N 348 HN0 OP3 O N N 349 HN0 C C N N 350 HN0 P P N N 351 HN0 C1 C N R 352 HN0 N1 N N N 353 HN0 O1 O N N 354 HN0 C2 C N N 355 HN0 N2 N N N 356 HN0 C3 C N S 357 HN0 N3 N N N 358 HN0 C4 C Y N 359 HN0 O4 O N N 360 HN0 C5 C Y N 361 HN0 C6 C N N 362 HN0 O6 O N N 363 HN0 C7 C N S 364 HN0 N7 N Y N 365 HN0 C8 C Y N 366 HN0 C9 C N N 367 HN0 N9 N Y N 368 HN0 "C1'" C N R 369 HN0 C10 C N N 370 HN0 C11 C N N 371 HN0 C12 C N N 372 HN0 C13 C N N 373 HN0 "C2'" C N N 374 HN0 "C3'" C N S 375 HN0 "O3'" O N N 376 HN0 "C4'" C N R 377 HN0 "O4'" O N N 378 HN0 "C5'" C N N 379 HN0 "O5'" O N N 380 HN0 OP1 O N N 381 HN0 OP2 O N N 382 HN0 H H N N 383 HN0 HA H N N 384 HN0 H1 H N N 385 HN0 HN1 H N N 386 HN0 HO1 H N N 387 HN0 HN2 H N N 388 HN0 H3 H N N 389 HN0 H7 H N N 390 HN0 H8 H N N 391 HN0 H9 H N N 392 HN0 H9A H N N 393 HN0 "H1'" H N N 394 HN0 H10 H N N 395 HN0 H10A H N N 396 HN0 H11 H N N 397 HN0 H11A H N N 398 HN0 H12 H N N 399 HN0 H12A H N N 400 HN0 H13 H N N 401 HN0 H13A H N N 402 HN0 H13B H N N 403 HN0 "H2'" H N N 404 HN0 "H2'A" H N N 405 HN0 "H3'" H N N 406 HN0 "HO3'" H N N 407 HN0 "H4'" H N N 408 HN0 "H5'" H N N 409 HN0 "H5'A" H N N 410 HN0 HOP3 H N N 411 HN0 HOP2 H N N 412 HOH O O N N 413 HOH H1 H N N 414 HOH H2 H N N 415 ILE N N N N 416 ILE CA C N S 417 ILE C C N N 418 ILE O O N N 419 ILE CB C N S 420 ILE CG1 C N N 421 ILE CG2 C N N 422 ILE CD1 C N N 423 ILE OXT O N N 424 ILE H H N N 425 ILE H2 H N N 426 ILE HA H N N 427 ILE HB H N N 428 ILE HG12 H N N 429 ILE HG13 H N N 430 ILE HG21 H N N 431 ILE HG22 H N N 432 ILE HG23 H N N 433 ILE HD11 H N N 434 ILE HD12 H N N 435 ILE HD13 H N N 436 ILE HXT H N N 437 LEU N N N N 438 LEU CA C N S 439 LEU C C N N 440 LEU O O N N 441 LEU CB C N N 442 LEU CG C N N 443 LEU CD1 C N N 444 LEU CD2 C N N 445 LEU OXT O N N 446 LEU H H N N 447 LEU H2 H N N 448 LEU HA H N N 449 LEU HB2 H N N 450 LEU HB3 H N N 451 LEU HG H N N 452 LEU HD11 H N N 453 LEU HD12 H N N 454 LEU HD13 H N N 455 LEU HD21 H N N 456 LEU HD22 H N N 457 LEU HD23 H N N 458 LEU HXT H N N 459 LYS N N N N 460 LYS CA C N S 461 LYS C C N N 462 LYS O O N N 463 LYS CB C N N 464 LYS CG C N N 465 LYS CD C N N 466 LYS CE C N N 467 LYS NZ N N N 468 LYS OXT O N N 469 LYS H H N N 470 LYS H2 H N N 471 LYS HA H N N 472 LYS HB2 H N N 473 LYS HB3 H N N 474 LYS HG2 H N N 475 LYS HG3 H N N 476 LYS HD2 H N N 477 LYS HD3 H N N 478 LYS HE2 H N N 479 LYS HE3 H N N 480 LYS HZ1 H N N 481 LYS HZ2 H N N 482 LYS HZ3 H N N 483 LYS HXT H N N 484 MET N N N N 485 MET CA C N S 486 MET C C N N 487 MET O O N N 488 MET CB C N N 489 MET CG C N N 490 MET SD S N N 491 MET CE C N N 492 MET OXT O N N 493 MET H H N N 494 MET H2 H N N 495 MET HA H N N 496 MET HB2 H N N 497 MET HB3 H N N 498 MET HG2 H N N 499 MET HG3 H N N 500 MET HE1 H N N 501 MET HE2 H N N 502 MET HE3 H N N 503 MET HXT H N N 504 PHE N N N N 505 PHE CA C N S 506 PHE C C N N 507 PHE O O N N 508 PHE CB C N N 509 PHE CG C Y N 510 PHE CD1 C Y N 511 PHE CD2 C Y N 512 PHE CE1 C Y N 513 PHE CE2 C Y N 514 PHE CZ C Y N 515 PHE OXT O N N 516 PHE H H N N 517 PHE H2 H N N 518 PHE HA H N N 519 PHE HB2 H N N 520 PHE HB3 H N N 521 PHE HD1 H N N 522 PHE HD2 H N N 523 PHE HE1 H N N 524 PHE HE2 H N N 525 PHE HZ H N N 526 PHE HXT H N N 527 PRO N N N N 528 PRO CA C N S 529 PRO C C N N 530 PRO O O N N 531 PRO CB C N N 532 PRO CG C N N 533 PRO CD C N N 534 PRO OXT O N N 535 PRO H H N N 536 PRO HA H N N 537 PRO HB2 H N N 538 PRO HB3 H N N 539 PRO HG2 H N N 540 PRO HG3 H N N 541 PRO HD2 H N N 542 PRO HD3 H N N 543 PRO HXT H N N 544 SER N N N N 545 SER CA C N S 546 SER C C N N 547 SER O O N N 548 SER CB C N N 549 SER OG O N N 550 SER OXT O N N 551 SER H H N N 552 SER H2 H N N 553 SER HA H N N 554 SER HB2 H N N 555 SER HB3 H N N 556 SER HG H N N 557 SER HXT H N N 558 THR N N N N 559 THR CA C N S 560 THR C C N N 561 THR O O N N 562 THR CB C N R 563 THR OG1 O N N 564 THR CG2 C N N 565 THR OXT O N N 566 THR H H N N 567 THR H2 H N N 568 THR HA H N N 569 THR HB H N N 570 THR HG1 H N N 571 THR HG21 H N N 572 THR HG22 H N N 573 THR HG23 H N N 574 THR HXT H N N 575 TYR N N N N 576 TYR CA C N S 577 TYR C C N N 578 TYR O O N N 579 TYR CB C N N 580 TYR CG C Y N 581 TYR CD1 C Y N 582 TYR CD2 C Y N 583 TYR CE1 C Y N 584 TYR CE2 C Y N 585 TYR CZ C Y N 586 TYR OH O N N 587 TYR OXT O N N 588 TYR H H N N 589 TYR H2 H N N 590 TYR HA H N N 591 TYR HB2 H N N 592 TYR HB3 H N N 593 TYR HD1 H N N 594 TYR HD2 H N N 595 TYR HE1 H N N 596 TYR HE2 H N N 597 TYR HH H N N 598 TYR HXT H N N 599 VAL N N N N 600 VAL CA C N S 601 VAL C C N N 602 VAL O O N N 603 VAL CB C N N 604 VAL CG1 C N N 605 VAL CG2 C N N 606 VAL OXT O N N 607 VAL H H N N 608 VAL H2 H N N 609 VAL HA H N N 610 VAL HB H N N 611 VAL HG11 H N N 612 VAL HG12 H N N 613 VAL HG13 H N N 614 VAL HG21 H N N 615 VAL HG22 H N N 616 VAL HG23 H N N 617 VAL HXT H N N 618 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DGT PG O1G sing N N 195 DGT PG O2G sing N N 196 DGT O1G HO1G sing N N 197 DGT O2G HO2G sing N N 198 DGT O3G PG doub N N 199 DGT O3B PG sing N N 200 DGT PB O3B sing N N 201 DGT PB O1B sing N N 202 DGT PB O3A sing N N 203 DGT O1B HO1B sing N N 204 DGT O2B PB doub N N 205 DGT PA O3A sing N N 206 DGT PA O1A sing N N 207 DGT O1A HO1A sing N N 208 DGT O2A PA doub N N 209 DGT "O5'" PA sing N N 210 DGT "O5'" "C5'" sing N N 211 DGT "C5'" "H5'" sing N N 212 DGT "C5'" "H5'A" sing N N 213 DGT "C4'" "C5'" sing N N 214 DGT "C4'" "H4'" sing N N 215 DGT "O4'" "C4'" sing N N 216 DGT "C3'" "C4'" sing N N 217 DGT "C3'" "O3'" sing N N 218 DGT "C3'" "H3'" sing N N 219 DGT "O3'" "HO3'" sing N N 220 DGT "C2'" "C3'" sing N N 221 DGT "C2'" "C1'" sing N N 222 DGT "C2'" "H2'" sing N N 223 DGT "C2'" "H2'A" sing N N 224 DGT "C1'" "O4'" sing N N 225 DGT "C1'" "H1'" sing N N 226 DGT N9 "C1'" sing N N 227 DGT N9 C4 sing Y N 228 DGT C8 N9 sing Y N 229 DGT C8 H8 sing N N 230 DGT N7 C8 doub Y N 231 DGT N7 C5 sing Y N 232 DGT C5 C6 sing N N 233 DGT C5 C4 doub Y N 234 DGT C6 N1 sing N N 235 DGT O6 C6 doub N N 236 DGT N1 C2 sing N N 237 DGT C2 N3 doub N N 238 DGT C2 N2 sing N N 239 DGT N2 HN2 sing N N 240 DGT N2 HN2A sing N N 241 DGT C4 N3 sing N N 242 DGT N1 H16 sing N N 243 DT OP3 P sing N N 244 DT OP3 HOP3 sing N N 245 DT P OP1 doub N N 246 DT P OP2 sing N N 247 DT P "O5'" sing N N 248 DT OP2 HOP2 sing N N 249 DT "O5'" "C5'" sing N N 250 DT "C5'" "C4'" sing N N 251 DT "C5'" "H5'" sing N N 252 DT "C5'" "H5''" sing N N 253 DT "C4'" "O4'" sing N N 254 DT "C4'" "C3'" sing N N 255 DT "C4'" "H4'" sing N N 256 DT "O4'" "C1'" sing N N 257 DT "C3'" "O3'" sing N N 258 DT "C3'" "C2'" sing N N 259 DT "C3'" "H3'" sing N N 260 DT "O3'" "HO3'" sing N N 261 DT "C2'" "C1'" sing N N 262 DT "C2'" "H2'" sing N N 263 DT "C2'" "H2''" sing N N 264 DT "C1'" N1 sing N N 265 DT "C1'" "H1'" sing N N 266 DT N1 C2 sing N N 267 DT N1 C6 sing N N 268 DT C2 O2 doub N N 269 DT C2 N3 sing N N 270 DT N3 C4 sing N N 271 DT N3 H3 sing N N 272 DT C4 O4 doub N N 273 DT C4 C5 sing N N 274 DT C5 C7 sing N N 275 DT C5 C6 doub N N 276 DT C7 H71 sing N N 277 DT C7 H72 sing N N 278 DT C7 H73 sing N N 279 DT C6 H6 sing N N 280 GLN N CA sing N N 281 GLN N H sing N N 282 GLN N H2 sing N N 283 GLN CA C sing N N 284 GLN CA CB sing N N 285 GLN CA HA sing N N 286 GLN C O doub N N 287 GLN C OXT sing N N 288 GLN CB CG sing N N 289 GLN CB HB2 sing N N 290 GLN CB HB3 sing N N 291 GLN CG CD sing N N 292 GLN CG HG2 sing N N 293 GLN CG HG3 sing N N 294 GLN CD OE1 doub N N 295 GLN CD NE2 sing N N 296 GLN NE2 HE21 sing N N 297 GLN NE2 HE22 sing N N 298 GLN OXT HXT sing N N 299 GLU N CA sing N N 300 GLU N H sing N N 301 GLU N H2 sing N N 302 GLU CA C sing N N 303 GLU CA CB sing N N 304 GLU CA HA sing N N 305 GLU C O doub N N 306 GLU C OXT sing N N 307 GLU CB CG sing N N 308 GLU CB HB2 sing N N 309 GLU CB HB3 sing N N 310 GLU CG CD sing N N 311 GLU CG HG2 sing N N 312 GLU CG HG3 sing N N 313 GLU CD OE1 doub N N 314 GLU CD OE2 sing N N 315 GLU OE2 HE2 sing N N 316 GLU OXT HXT sing N N 317 GLY N CA sing N N 318 GLY N H sing N N 319 GLY N H2 sing N N 320 GLY CA C sing N N 321 GLY CA HA2 sing N N 322 GLY CA HA3 sing N N 323 GLY C O doub N N 324 GLY C OXT sing N N 325 GLY OXT HXT sing N N 326 HIS N CA sing N N 327 HIS N H sing N N 328 HIS N H2 sing N N 329 HIS CA C sing N N 330 HIS CA CB sing N N 331 HIS CA HA sing N N 332 HIS C O doub N N 333 HIS C OXT sing N N 334 HIS CB CG sing N N 335 HIS CB HB2 sing N N 336 HIS CB HB3 sing N N 337 HIS CG ND1 sing Y N 338 HIS CG CD2 doub Y N 339 HIS ND1 CE1 doub Y N 340 HIS ND1 HD1 sing N N 341 HIS CD2 NE2 sing Y N 342 HIS CD2 HD2 sing N N 343 HIS CE1 NE2 sing Y N 344 HIS CE1 HE1 sing N N 345 HIS NE2 HE2 sing N N 346 HIS OXT HXT sing N N 347 HN0 OP3 P sing N N 348 HN0 C C1 sing N N 349 HN0 C C3 sing N N 350 HN0 C H sing N N 351 HN0 C HA sing N N 352 HN0 P OP1 doub N N 353 HN0 P "O5'" sing N N 354 HN0 P OP2 sing N N 355 HN0 O1 C1 sing N N 356 HN0 C1 O4 sing N N 357 HN0 C1 H1 sing N N 358 HN0 C6 N1 sing N N 359 HN0 N1 C2 sing N N 360 HN0 N1 HN1 sing N N 361 HN0 O1 HO1 sing N N 362 HN0 C2 N2 sing N N 363 HN0 C2 N3 doub N N 364 HN0 N2 C3 sing N N 365 HN0 N2 HN2 sing N N 366 HN0 C3 C7 sing N N 367 HN0 C3 H3 sing N N 368 HN0 C4 N3 sing N N 369 HN0 C5 C4 doub Y N 370 HN0 C4 N9 sing Y N 371 HN0 O4 C7 sing N N 372 HN0 C6 C5 sing N N 373 HN0 C5 N7 sing Y N 374 HN0 O6 C6 doub N N 375 HN0 C7 C9 sing N N 376 HN0 C7 H7 sing N N 377 HN0 N7 C8 doub Y N 378 HN0 C8 N9 sing Y N 379 HN0 C8 H8 sing N N 380 HN0 C9 C10 sing N N 381 HN0 C9 H9 sing N N 382 HN0 C9 H9A sing N N 383 HN0 N9 "C1'" sing N N 384 HN0 "O4'" "C1'" sing N N 385 HN0 "C1'" "C2'" sing N N 386 HN0 "C1'" "H1'" sing N N 387 HN0 C11 C10 sing N N 388 HN0 C10 H10 sing N N 389 HN0 C10 H10A sing N N 390 HN0 C11 C12 sing N N 391 HN0 C11 H11 sing N N 392 HN0 C11 H11A sing N N 393 HN0 C13 C12 sing N N 394 HN0 C12 H12 sing N N 395 HN0 C12 H12A sing N N 396 HN0 C13 H13 sing N N 397 HN0 C13 H13A sing N N 398 HN0 C13 H13B sing N N 399 HN0 "C2'" "C3'" sing N N 400 HN0 "C2'" "H2'" sing N N 401 HN0 "C2'" "H2'A" sing N N 402 HN0 "C4'" "C3'" sing N N 403 HN0 "C3'" "O3'" sing N N 404 HN0 "C3'" "H3'" sing N N 405 HN0 "O3'" "HO3'" sing N N 406 HN0 "O4'" "C4'" sing N N 407 HN0 "C5'" "C4'" sing N N 408 HN0 "C4'" "H4'" sing N N 409 HN0 "C5'" "O5'" sing N N 410 HN0 "C5'" "H5'" sing N N 411 HN0 "C5'" "H5'A" sing N N 412 HN0 OP3 HOP3 sing N N 413 HN0 OP2 HOP2 sing N N 414 HOH O H1 sing N N 415 HOH O H2 sing N N 416 ILE N CA sing N N 417 ILE N H sing N N 418 ILE N H2 sing N N 419 ILE CA C sing N N 420 ILE CA CB sing N N 421 ILE CA HA sing N N 422 ILE C O doub N N 423 ILE C OXT sing N N 424 ILE CB CG1 sing N N 425 ILE CB CG2 sing N N 426 ILE CB HB sing N N 427 ILE CG1 CD1 sing N N 428 ILE CG1 HG12 sing N N 429 ILE CG1 HG13 sing N N 430 ILE CG2 HG21 sing N N 431 ILE CG2 HG22 sing N N 432 ILE CG2 HG23 sing N N 433 ILE CD1 HD11 sing N N 434 ILE CD1 HD12 sing N N 435 ILE CD1 HD13 sing N N 436 ILE OXT HXT sing N N 437 LEU N CA sing N N 438 LEU N H sing N N 439 LEU N H2 sing N N 440 LEU CA C sing N N 441 LEU CA CB sing N N 442 LEU CA HA sing N N 443 LEU C O doub N N 444 LEU C OXT sing N N 445 LEU CB CG sing N N 446 LEU CB HB2 sing N N 447 LEU CB HB3 sing N N 448 LEU CG CD1 sing N N 449 LEU CG CD2 sing N N 450 LEU CG HG sing N N 451 LEU CD1 HD11 sing N N 452 LEU CD1 HD12 sing N N 453 LEU CD1 HD13 sing N N 454 LEU CD2 HD21 sing N N 455 LEU CD2 HD22 sing N N 456 LEU CD2 HD23 sing N N 457 LEU OXT HXT sing N N 458 LYS N CA sing N N 459 LYS N H sing N N 460 LYS N H2 sing N N 461 LYS CA C sing N N 462 LYS CA CB sing N N 463 LYS CA HA sing N N 464 LYS C O doub N N 465 LYS C OXT sing N N 466 LYS CB CG sing N N 467 LYS CB HB2 sing N N 468 LYS CB HB3 sing N N 469 LYS CG CD sing N N 470 LYS CG HG2 sing N N 471 LYS CG HG3 sing N N 472 LYS CD CE sing N N 473 LYS CD HD2 sing N N 474 LYS CD HD3 sing N N 475 LYS CE NZ sing N N 476 LYS CE HE2 sing N N 477 LYS CE HE3 sing N N 478 LYS NZ HZ1 sing N N 479 LYS NZ HZ2 sing N N 480 LYS NZ HZ3 sing N N 481 LYS OXT HXT sing N N 482 MET N CA sing N N 483 MET N H sing N N 484 MET N H2 sing N N 485 MET CA C sing N N 486 MET CA CB sing N N 487 MET CA HA sing N N 488 MET C O doub N N 489 MET C OXT sing N N 490 MET CB CG sing N N 491 MET CB HB2 sing N N 492 MET CB HB3 sing N N 493 MET CG SD sing N N 494 MET CG HG2 sing N N 495 MET CG HG3 sing N N 496 MET SD CE sing N N 497 MET CE HE1 sing N N 498 MET CE HE2 sing N N 499 MET CE HE3 sing N N 500 MET OXT HXT sing N N 501 PHE N CA sing N N 502 PHE N H sing N N 503 PHE N H2 sing N N 504 PHE CA C sing N N 505 PHE CA CB sing N N 506 PHE CA HA sing N N 507 PHE C O doub N N 508 PHE C OXT sing N N 509 PHE CB CG sing N N 510 PHE CB HB2 sing N N 511 PHE CB HB3 sing N N 512 PHE CG CD1 doub Y N 513 PHE CG CD2 sing Y N 514 PHE CD1 CE1 sing Y N 515 PHE CD1 HD1 sing N N 516 PHE CD2 CE2 doub Y N 517 PHE CD2 HD2 sing N N 518 PHE CE1 CZ doub Y N 519 PHE CE1 HE1 sing N N 520 PHE CE2 CZ sing Y N 521 PHE CE2 HE2 sing N N 522 PHE CZ HZ sing N N 523 PHE OXT HXT sing N N 524 PRO N CA sing N N 525 PRO N CD sing N N 526 PRO N H sing N N 527 PRO CA C sing N N 528 PRO CA CB sing N N 529 PRO CA HA sing N N 530 PRO C O doub N N 531 PRO C OXT sing N N 532 PRO CB CG sing N N 533 PRO CB HB2 sing N N 534 PRO CB HB3 sing N N 535 PRO CG CD sing N N 536 PRO CG HG2 sing N N 537 PRO CG HG3 sing N N 538 PRO CD HD2 sing N N 539 PRO CD HD3 sing N N 540 PRO OXT HXT sing N N 541 SER N CA sing N N 542 SER N H sing N N 543 SER N H2 sing N N 544 SER CA C sing N N 545 SER CA CB sing N N 546 SER CA HA sing N N 547 SER C O doub N N 548 SER C OXT sing N N 549 SER CB OG sing N N 550 SER CB HB2 sing N N 551 SER CB HB3 sing N N 552 SER OG HG sing N N 553 SER OXT HXT sing N N 554 THR N CA sing N N 555 THR N H sing N N 556 THR N H2 sing N N 557 THR CA C sing N N 558 THR CA CB sing N N 559 THR CA HA sing N N 560 THR C O doub N N 561 THR C OXT sing N N 562 THR CB OG1 sing N N 563 THR CB CG2 sing N N 564 THR CB HB sing N N 565 THR OG1 HG1 sing N N 566 THR CG2 HG21 sing N N 567 THR CG2 HG22 sing N N 568 THR CG2 HG23 sing N N 569 THR OXT HXT sing N N 570 TYR N CA sing N N 571 TYR N H sing N N 572 TYR N H2 sing N N 573 TYR CA C sing N N 574 TYR CA CB sing N N 575 TYR CA HA sing N N 576 TYR C O doub N N 577 TYR C OXT sing N N 578 TYR CB CG sing N N 579 TYR CB HB2 sing N N 580 TYR CB HB3 sing N N 581 TYR CG CD1 doub Y N 582 TYR CG CD2 sing Y N 583 TYR CD1 CE1 sing Y N 584 TYR CD1 HD1 sing N N 585 TYR CD2 CE2 doub Y N 586 TYR CD2 HD2 sing N N 587 TYR CE1 CZ doub Y N 588 TYR CE1 HE1 sing N N 589 TYR CE2 CZ sing Y N 590 TYR CE2 HE2 sing N N 591 TYR CZ OH sing N N 592 TYR OH HH sing N N 593 TYR OXT HXT sing N N 594 VAL N CA sing N N 595 VAL N H sing N N 596 VAL N H2 sing N N 597 VAL CA C sing N N 598 VAL CA CB sing N N 599 VAL CA HA sing N N 600 VAL C O doub N N 601 VAL C OXT sing N N 602 VAL CB CG1 sing N N 603 VAL CB CG2 sing N N 604 VAL CB HB sing N N 605 VAL CG1 HG11 sing N N 606 VAL CG1 HG12 sing N N 607 VAL CG1 HG13 sing N N 608 VAL CG2 HG21 sing N N 609 VAL CG2 HG22 sing N N 610 VAL CG2 HG23 sing N N 611 VAL OXT HXT sing N N 612 # _ndb_struct_conf_na.entry_id 3T5L _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 5 1_555 C DC 13 1_555 -0.200 0.155 -0.685 -19.664 -1.284 6.887 1 B_DG406:DC513_C B 406 ? C 513 ? 19 1 1 B DA 6 1_555 C DT 12 1_555 0.192 -0.219 -0.354 -2.578 1.002 -2.458 2 B_DA407:DT512_C B 407 ? C 512 ? 20 1 1 B DA 7 1_555 C DT 11 1_555 -0.258 0.065 -0.094 1.885 -9.028 4.871 3 B_DA408:DT511_C B 408 ? C 511 ? 20 1 1 B DT 8 1_555 C DA 10 1_555 -0.524 -0.023 -0.296 12.420 -9.035 5.195 4 B_DT409:DA510_C B 409 ? C 510 ? 20 1 1 B DC 9 1_555 C DG 9 1_555 -0.352 -0.094 -0.143 4.903 -8.951 -0.187 5 B_DC410:DG509_C B 410 ? C 509 ? 19 1 1 B DC 10 1_555 C DG 8 1_555 0.209 0.062 0.142 -5.844 -5.486 0.822 6 B_DC411:DG508_C B 411 ? C 508 ? 19 1 1 B DT 11 1_555 C DA 7 1_555 -0.318 -0.192 0.291 -4.140 -4.443 7.748 7 B_DT412:DA507_C B 412 ? C 507 ? 20 1 1 B DT 12 1_555 C DA 6 1_555 -0.432 -0.051 -0.240 1.108 -10.891 -0.640 8 B_DT413:DA506_C B 413 ? C 506 ? 20 1 1 B DC 13 1_555 C DG 5 1_555 -0.456 -0.363 0.090 -9.107 -2.874 -4.966 9 B_DC414:DG505_C B 414 ? C 505 ? 19 1 1 B DC 14 1_555 C DG 4 1_555 -0.151 -0.345 0.063 -8.170 -5.697 0.692 10 B_DC415:DG504_C B 415 ? C 504 ? 19 1 1 B DC 15 1_555 C DG 3 1_555 0.337 -0.214 0.043 -3.443 -4.754 -5.381 11 B_DC416:DG503_C B 416 ? C 503 ? 19 1 1 B DC 16 1_555 C DG 2 1_555 0.207 -0.252 -0.531 4.110 -2.274 2.536 12 B_DC417:DG502_C B 417 ? C 502 ? 19 1 1 B DC 17 1_555 C DG 1 1_555 0.221 -0.079 -0.216 5.757 -0.888 0.571 13 B_DC418:DG501_C B 418 ? C 501 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 5 1_555 C DC 13 1_555 B DA 6 1_555 C DT 12 1_555 -0.675 -0.317 3.004 -2.480 4.692 29.398 -1.511 0.835 2.964 9.151 4.837 29.863 1 BB_DG406DA407:DT512DC513_CC B 406 ? C 513 ? B 407 ? C 512 ? 1 B DA 6 1_555 C DT 12 1_555 B DA 7 1_555 C DT 11 1_555 -0.255 -0.317 3.271 -1.128 3.737 31.561 -1.259 0.260 3.220 6.837 2.064 31.796 2 BB_DA407DA408:DT511DT512_CC B 407 ? C 512 ? B 408 ? C 511 ? 1 B DA 7 1_555 C DT 11 1_555 B DT 8 1_555 C DA 10 1_555 -0.093 -0.510 3.104 -0.576 3.526 25.960 -2.022 0.058 3.011 7.803 1.274 26.201 3 BB_DA408DT409:DA510DT511_CC B 408 ? C 511 ? B 409 ? C 510 ? 1 B DT 8 1_555 C DA 10 1_555 B DC 9 1_555 C DG 9 1_555 0.380 -0.095 3.395 -1.542 -1.340 39.945 0.021 -0.738 3.380 -1.960 2.255 39.995 4 BB_DT409DC410:DG509DA510_CC B 409 ? C 510 ? B 410 ? C 509 ? 1 B DC 9 1_555 C DG 9 1_555 B DC 10 1_555 C DG 8 1_555 -0.323 -0.619 3.695 -1.025 2.403 36.888 -1.341 0.354 3.656 3.792 1.618 36.977 5 BB_DC410DC411:DG508DG509_CC B 410 ? C 509 ? B 411 ? C 508 ? 1 B DC 10 1_555 C DG 8 1_555 B DT 11 1_555 C DA 7 1_555 0.260 -0.258 3.317 0.228 5.289 29.719 -1.581 -0.452 3.226 10.210 -0.439 30.177 6 BB_DC411DT412:DA507DG508_CC B 411 ? C 508 ? B 412 ? C 507 ? 1 B DT 11 1_555 C DA 7 1_555 B DT 12 1_555 C DA 6 1_555 0.004 -0.352 3.021 4.977 1.628 32.863 -0.866 0.759 2.969 2.856 -8.728 33.267 7 BB_DT412DT413:DA506DA507_CC B 412 ? C 507 ? B 413 ? C 506 ? 1 B DT 12 1_555 C DA 6 1_555 B DC 13 1_555 C DG 5 1_555 0.509 -0.397 3.565 -2.107 5.903 32.255 -1.789 -1.288 3.402 10.502 3.749 32.843 8 BB_DT413DC414:DG505DA506_CC B 413 ? C 506 ? B 414 ? C 505 ? 1 B DC 13 1_555 C DG 5 1_555 B DC 14 1_555 C DG 4 1_555 0.124 -0.777 3.256 1.399 8.646 30.024 -3.025 0.026 2.927 16.259 -2.631 31.248 9 BB_DC414DC415:DG504DG505_CC B 414 ? C 505 ? B 415 ? C 504 ? 1 B DC 14 1_555 C DG 4 1_555 B DC 15 1_555 C DG 3 1_555 -0.518 -0.614 3.236 -0.746 6.005 35.042 -1.861 0.742 3.102 9.882 1.227 35.545 10 BB_DC415DC416:DG503DG504_CC B 415 ? C 504 ? B 416 ? C 503 ? 1 B DC 15 1_555 C DG 3 1_555 B DC 16 1_555 C DG 2 1_555 1.550 -0.369 3.123 8.897 4.711 30.513 -1.525 -1.184 3.339 8.659 -16.355 32.094 11 BB_DC416DC417:DG502DG503_CC B 416 ? C 503 ? B 417 ? C 502 ? 1 B DC 16 1_555 C DG 2 1_555 B DC 17 1_555 C DG 1 1_555 -0.605 0.380 3.364 -2.029 8.533 31.165 -0.903 0.710 3.379 15.501 3.686 32.346 12 BB_DC417DC418:DG501DG502_CC B 417 ? C 502 ? B 418 ? C 501 ? # _atom_sites.entry_id 3T5L _atom_sites.fract_transf_matrix[1][1] 0.010513 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009642 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018934 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_