HEADER TRANSFERASE 28-JUL-11 3T69 TITLE CRYSTAL STRUCTURE OF A PUTATIVE 2-DEHYDRO-3-DEOXYGALACTONOKINASE TITLE 2 PROTEIN FROM SINORHIZOBIUM MELILOTI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE 2-DEHYDRO-3-DEOXYGALACTONOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.58; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; SOURCE 3 ORGANISM_COMMON: ENSIFER MELILOTI; SOURCE 4 ORGANISM_TAXID: 266834; SOURCE 5 STRAIN: 1021; SOURCE 6 GENE: DGOK1, R00825, SMC00881; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIPL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS KEYWDS 2 RESEARCH CONSORTIUM, NYSGRC, 2-DEHYDRO-3-DEOXYGALACTONOKINASE, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.AGARWAL,S.CHAMALA,B.EVANS,R.FOTI,A.GIZZI,B.HILLERICH,A.KAR, AUTHOR 2 J.LAFLEUR,R.SEIDEL,G.VILLIGAS,W.ZENCHECK,S.C.ALMO,S.SWAMINATHAN,NEW AUTHOR 3 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 2 28-FEB-24 3T69 1 REMARK SEQADV REVDAT 1 17-AUG-11 3T69 0 JRNL AUTH R.AGARWAL,S.C.ALMO,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE JRNL TITL 2 2-DEHYDRO-3-DEOXYGALACTONOKINASE PROTEIN FROM SINORHIZOBIUM JRNL TITL 3 MELILOTI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 25837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1360 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1300 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.429 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.082 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4502 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6127 ; 1.880 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 601 ; 6.946 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;36.908 ;22.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 652 ;20.178 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;23.303 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 707 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3423 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2971 ; 0.911 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4667 ; 1.752 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1531 ; 2.784 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1460 ; 4.608 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3T69 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9783 REMARK 200 MONOCHROMATOR : SI-III REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27367 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHARP, CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH5.5, 2M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.19900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.56700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.87050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.56700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.19900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.87050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 MET A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 309 REMARK 465 GLU A 310 REMARK 465 ASN A 311 REMARK 465 LEU A 312 REMARK 465 TYR A 313 REMARK 465 PHE A 314 REMARK 465 GLN A 315 REMARK 465 SER A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 TRP A 323 REMARK 465 SER A 324 REMARK 465 HIS A 325 REMARK 465 PRO A 326 REMARK 465 GLN A 327 REMARK 465 PHE A 328 REMARK 465 GLU A 329 REMARK 465 LYS A 330 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 MET B 3 REMARK 465 THR B 4 REMARK 465 THR B 5 REMARK 465 ALA B 6 REMARK 465 GLY B 7 REMARK 465 GLY B 47 REMARK 465 GLY B 255 REMARK 465 SER B 256 REMARK 465 GLY B 257 REMARK 465 SER B 316 REMARK 465 HIS B 317 REMARK 465 HIS B 318 REMARK 465 HIS B 319 REMARK 465 HIS B 320 REMARK 465 HIS B 321 REMARK 465 HIS B 322 REMARK 465 TRP B 323 REMARK 465 SER B 324 REMARK 465 HIS B 325 REMARK 465 PRO B 326 REMARK 465 GLN B 327 REMARK 465 PHE B 328 REMARK 465 GLU B 329 REMARK 465 LYS B 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 256 OG REMARK 470 SER A 258 OG REMARK 470 ARG B 20 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 45 CB CG CD CE NZ REMARK 470 SER B 60 OG REMARK 470 LEU B 139 CB CG CD1 CD2 REMARK 470 ALA B 232 CB REMARK 470 SER B 258 OG REMARK 470 ARG B 275 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 286 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 292 CG CD OE1 OE2 REMARK 470 ARG B 295 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 80 123.34 -170.78 REMARK 500 ASP A 118 123.16 -38.55 REMARK 500 MET A 170 35.63 -80.32 REMARK 500 ALA A 196 -36.46 -35.20 REMARK 500 ASP A 260 -70.21 -64.72 REMARK 500 TRP A 306 68.45 -118.93 REMARK 500 MET B 72 0.31 -68.11 REMARK 500 GLN B 77 31.69 -97.73 REMARK 500 ASP B 118 123.01 -35.96 REMARK 500 PRO B 149 173.00 -57.76 REMARK 500 MET B 170 41.31 -94.30 REMARK 500 ALA B 196 -34.13 -36.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 333 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-012388 RELATED DB: TARGETDB DBREF 3T69 A 3 308 UNP Q92RN7 Q92RN7_RHIME 1 306 DBREF 3T69 B 3 308 UNP Q92RN7 Q92RN7_RHIME 1 306 SEQADV 3T69 MET A 1 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 VAL A 2 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 ALA A 309 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLU A 310 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 ASN A 311 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 LEU A 312 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 TYR A 313 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 PHE A 314 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLN A 315 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 SER A 316 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 317 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 318 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 319 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 320 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 321 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 322 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 TRP A 323 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 SER A 324 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS A 325 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 PRO A 326 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLN A 327 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 PHE A 328 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLU A 329 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 LYS A 330 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 MET B 1 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 VAL B 2 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 ALA B 309 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLU B 310 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 ASN B 311 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 LEU B 312 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 TYR B 313 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 PHE B 314 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLN B 315 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 SER B 316 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 317 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 318 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 319 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 320 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 321 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 322 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 TRP B 323 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 SER B 324 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 HIS B 325 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 PRO B 326 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLN B 327 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 PHE B 328 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 GLU B 329 UNP Q92RN7 EXPRESSION TAG SEQADV 3T69 LYS B 330 UNP Q92RN7 EXPRESSION TAG SEQRES 1 A 330 MET VAL MET THR THR ALA GLY TYR TYR ALA ALA VAL ASP SEQRES 2 A 330 TRP GLY THR SER SER PHE ARG LEU TRP ILE ILE GLY GLU SEQRES 3 A 330 ASP GLY ALA VAL LEU ALA GLU ARG ARG SER ALA GLU GLY SEQRES 4 A 330 MET THR THR ALA ALA LYS THR GLY PHE HIS THR ILE LEU SEQRES 5 A 330 ASP GLY HIS LEU ALA ALA VAL SER ALA PRO ALA HIS LEU SEQRES 6 A 330 PRO ILE ILE ILE CYS GLY MET ALA GLY ALA ARG GLN GLY SEQRES 7 A 330 TRP LYS GLU ALA GLY TYR ILE GLU THR PRO ALA ALA LEU SEQRES 8 A 330 ALA GLU ILE ALA GLY ARG ALA THR ALA ILE PRO ASP VAL SEQRES 9 A 330 ASP ARG ASP ILE ARG ILE LEU PRO GLY LEU ALA GLN ARG SEQRES 10 A 330 ASP ARG ARG HIS PRO ASP VAL MET ARG GLY GLU GLU THR SEQRES 11 A 330 GLN LEU LEU GLY ALA ALA ALA HIS LEU GLY ALA GLY SER SEQRES 12 A 330 HIS LEU VAL CYS MET PRO GLY THR HIS SER LYS TRP VAL SEQRES 13 A 330 ARG LEU ALA ASP ASP ARG VAL GLU GLY PHE SER THR PHE SEQRES 14 A 330 MET THR GLY GLU LEU PHE ASP THR ILE ALA ARG HIS THR SEQRES 15 A 330 ILE LEU SER HIS ALA VAL ALA GLU ALA ASP THR PHE ALA SEQRES 16 A 330 ALA GLY SER ALA ALA PHE THR ASP ALA VAL SER ARG THR SEQRES 17 A 330 ARG GLU ASN PRO ALA LEU ALA THR ASN LEU LEU PHE SER SEQRES 18 A 330 VAL ARG ALA GLY GLN LEU LEU HIS GLY THR ALA ALA ALA SEQRES 19 A 330 ASP ALA ARG ALA GLN LEU SER GLY THR LEU ILE GLY LEU SEQRES 20 A 330 GLU ILE ALA GLY ALA LEU ALA GLY SER GLY SER VAL ASP SEQRES 21 A 330 GLY VAL CYS LEU VAL GLY SER GLY GLY LEU GLY THR LEU SEQRES 22 A 330 TYR ARG THR ALA LEU GLU SER GLN GLY LEU ASN VAL ARG SEQRES 23 A 330 ALA VAL ASP ALA ASP GLU ALA VAL ARG ALA GLY LEU SER SEQRES 24 A 330 ALA ALA ALA ARG ALA ILE TRP PRO LEU ALA GLU ASN LEU SEQRES 25 A 330 TYR PHE GLN SER HIS HIS HIS HIS HIS HIS TRP SER HIS SEQRES 26 A 330 PRO GLN PHE GLU LYS SEQRES 1 B 330 MET VAL MET THR THR ALA GLY TYR TYR ALA ALA VAL ASP SEQRES 2 B 330 TRP GLY THR SER SER PHE ARG LEU TRP ILE ILE GLY GLU SEQRES 3 B 330 ASP GLY ALA VAL LEU ALA GLU ARG ARG SER ALA GLU GLY SEQRES 4 B 330 MET THR THR ALA ALA LYS THR GLY PHE HIS THR ILE LEU SEQRES 5 B 330 ASP GLY HIS LEU ALA ALA VAL SER ALA PRO ALA HIS LEU SEQRES 6 B 330 PRO ILE ILE ILE CYS GLY MET ALA GLY ALA ARG GLN GLY SEQRES 7 B 330 TRP LYS GLU ALA GLY TYR ILE GLU THR PRO ALA ALA LEU SEQRES 8 B 330 ALA GLU ILE ALA GLY ARG ALA THR ALA ILE PRO ASP VAL SEQRES 9 B 330 ASP ARG ASP ILE ARG ILE LEU PRO GLY LEU ALA GLN ARG SEQRES 10 B 330 ASP ARG ARG HIS PRO ASP VAL MET ARG GLY GLU GLU THR SEQRES 11 B 330 GLN LEU LEU GLY ALA ALA ALA HIS LEU GLY ALA GLY SER SEQRES 12 B 330 HIS LEU VAL CYS MET PRO GLY THR HIS SER LYS TRP VAL SEQRES 13 B 330 ARG LEU ALA ASP ASP ARG VAL GLU GLY PHE SER THR PHE SEQRES 14 B 330 MET THR GLY GLU LEU PHE ASP THR ILE ALA ARG HIS THR SEQRES 15 B 330 ILE LEU SER HIS ALA VAL ALA GLU ALA ASP THR PHE ALA SEQRES 16 B 330 ALA GLY SER ALA ALA PHE THR ASP ALA VAL SER ARG THR SEQRES 17 B 330 ARG GLU ASN PRO ALA LEU ALA THR ASN LEU LEU PHE SER SEQRES 18 B 330 VAL ARG ALA GLY GLN LEU LEU HIS GLY THR ALA ALA ALA SEQRES 19 B 330 ASP ALA ARG ALA GLN LEU SER GLY THR LEU ILE GLY LEU SEQRES 20 B 330 GLU ILE ALA GLY ALA LEU ALA GLY SER GLY SER VAL ASP SEQRES 21 B 330 GLY VAL CYS LEU VAL GLY SER GLY GLY LEU GLY THR LEU SEQRES 22 B 330 TYR ARG THR ALA LEU GLU SER GLN GLY LEU ASN VAL ARG SEQRES 23 B 330 ALA VAL ASP ALA ASP GLU ALA VAL ARG ALA GLY LEU SER SEQRES 24 B 330 ALA ALA ALA ARG ALA ILE TRP PRO LEU ALA GLU ASN LEU SEQRES 25 B 330 TYR PHE GLN SER HIS HIS HIS HIS HIS HIS TRP SER HIS SEQRES 26 B 330 PRO GLN PHE GLU LYS HET SO4 A 331 5 HET SO4 A 332 5 HET SO4 B 331 5 HET SO4 B 332 5 HET SO4 B 333 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *64(H2 O) HELIX 1 1 GLY A 39 GLY A 47 1 9 HELIX 2 2 GLY A 47 VAL A 59 1 13 HELIX 3 3 ALA A 73 ALA A 75 5 3 HELIX 4 4 ALA A 92 ARG A 97 1 6 HELIX 5 5 GLY A 127 ALA A 137 1 11 HELIX 6 6 MET A 170 THR A 182 1 13 HELIX 7 7 LEU A 184 ALA A 189 1 6 HELIX 8 8 SER A 198 ASN A 211 1 14 HELIX 9 9 LEU A 214 GLY A 230 1 17 HELIX 10 10 ALA A 232 ALA A 254 1 23 HELIX 11 11 SER A 267 GLN A 281 1 15 HELIX 12 12 ALA A 290 TRP A 306 1 17 HELIX 13 13 GLY B 39 ALA B 44 1 6 HELIX 14 14 HIS B 49 VAL B 59 1 11 HELIX 15 15 ALA B 73 ALA B 75 5 3 HELIX 16 16 ALA B 92 ALA B 98 5 7 HELIX 17 17 GLY B 127 GLY B 140 1 14 HELIX 18 18 MET B 170 THR B 182 1 13 HELIX 19 19 LEU B 184 ALA B 189 1 6 HELIX 20 20 SER B 198 ASN B 211 1 14 HELIX 21 21 LEU B 214 HIS B 229 1 16 HELIX 22 22 ALA B 232 LEU B 253 1 22 HELIX 23 23 SER B 267 GLN B 281 1 15 HELIX 24 24 ASP B 289 TRP B 306 1 18 SHEET 1 A 6 VAL A 30 SER A 36 0 SHEET 2 A 6 PHE A 19 ILE A 24 -1 N ILE A 23 O LEU A 31 SHEET 3 A 6 TYR A 9 TRP A 14 -1 N TYR A 9 O ILE A 24 SHEET 4 A 6 ILE A 67 GLY A 71 1 O ILE A 68 N VAL A 12 SHEET 5 A 6 ILE A 108 ILE A 110 1 O ARG A 109 N ILE A 67 SHEET 6 A 6 THR A 99 ALA A 100 -1 N THR A 99 O ILE A 110 SHEET 1 B 3 TYR A 84 GLU A 86 0 SHEET 2 B 3 GLY A 113 GLN A 116 1 O ALA A 115 N ILE A 85 SHEET 3 B 3 ASP A 123 MET A 125 -1 O ASP A 123 N GLN A 116 SHEET 1 C 6 ALA A 89 ALA A 90 0 SHEET 2 C 6 ARG A 162 PHE A 169 -1 O VAL A 163 N ALA A 89 SHEET 3 C 6 SER A 153 ALA A 159 -1 N ARG A 157 O GLU A 164 SHEET 4 C 6 HIS A 144 MET A 148 -1 N MET A 148 O LYS A 154 SHEET 5 C 6 GLY A 261 GLY A 266 1 O CYS A 263 N CYS A 147 SHEET 6 C 6 ASN A 284 ASP A 289 1 O VAL A 288 N LEU A 264 SHEET 1 D 6 VAL B 30 SER B 36 0 SHEET 2 D 6 PHE B 19 ILE B 24 -1 N ILE B 23 O LEU B 31 SHEET 3 D 6 TYR B 9 TRP B 14 -1 N TYR B 9 O ILE B 24 SHEET 4 D 6 ILE B 67 GLY B 71 1 O ILE B 68 N VAL B 12 SHEET 5 D 6 ILE B 108 ILE B 110 1 O ARG B 109 N ILE B 67 SHEET 6 D 6 THR B 99 ILE B 101 -1 N THR B 99 O ILE B 110 SHEET 1 E 3 TYR B 84 GLU B 86 0 SHEET 2 E 3 GLY B 113 GLN B 116 1 O GLY B 113 N ILE B 85 SHEET 3 E 3 ASP B 123 MET B 125 -1 O ASP B 123 N GLN B 116 SHEET 1 F 6 ALA B 89 ALA B 90 0 SHEET 2 F 6 ARG B 162 PHE B 169 -1 O VAL B 163 N ALA B 89 SHEET 3 F 6 SER B 153 ALA B 159 -1 N SER B 153 O PHE B 169 SHEET 4 F 6 SER B 143 MET B 148 -1 N MET B 148 O LYS B 154 SHEET 5 F 6 GLY B 261 LEU B 264 1 O CYS B 263 N LEU B 145 SHEET 6 F 6 ASN B 284 VAL B 285 1 O ASN B 284 N VAL B 262 CISPEP 1 THR A 87 PRO A 88 0 -5.06 CISPEP 2 ASP A 260 GLY A 261 0 8.55 CISPEP 3 THR B 87 PRO B 88 0 -1.46 CISPEP 4 ASP B 260 GLY B 261 0 -3.29 SITE 1 AC1 4 HIS A 186 ARG A 223 ARG B 76 GLN B 77 SITE 1 AC2 7 LEU A 139 GLY A 140 HIS A 144 ARG A 286 SITE 2 AC2 7 ALA B 98 THR B 99 ALA B 100 SITE 1 AC3 4 PRO A 149 GLY A 150 THR A 151 HIS A 152 SITE 1 AC4 5 ALA A 75 ARG A 76 TYR A 84 ARG A 126 SITE 2 AC4 5 HOH A 341 SITE 1 AC5 3 ARG A 162 ARG B 117 ARG B 119 CRYST1 62.398 109.741 121.134 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016026 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008255 0.00000