HEADER HYDROLASE/HYDROLASE INHIBITOR 01-AUG-11 3T87 TITLE THERMOLYSIN IN COMPLEX WITH UBTLN28 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOLYSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MATURE FORM (UNP RESIDUES 233-548); COMPND 5 SYNONYM: THERMOSTABLE NEUTRAL PROTEINASE; COMPND 6 EC: 3.4.24.27 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOPROTEOLYTICUS; SOURCE 3 ORGANISM_TAXID: 1427 KEYWDS PROTEASE, METALLOPROTEASE, HYDROLYSIS OF PEPTIDE BONDS, KEYWDS 2 PHOSPHORAMIDON, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.BIELA,A.HEINE,G.KLEBE REVDAT 2 13-SEP-23 3T87 1 REMARK LINK REVDAT 1 01-AUG-12 3T87 0 JRNL AUTH A.BIELA,N.NASIEF,A.HEINE,D.HANGAUER,G.KLEBE JRNL TITL THERMOLYSIN INHIBITION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 80710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.107 REMARK 3 R VALUE (WORKING SET) : 0.105 REMARK 3 FREE R VALUE : 0.127 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 4106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2441 - 3.9308 0.89 2774 143 0.1459 0.1410 REMARK 3 2 3.9308 - 3.1207 0.93 2726 148 0.1258 0.1551 REMARK 3 3 3.1207 - 2.7264 0.94 2673 144 0.1157 0.1384 REMARK 3 4 2.7264 - 2.4772 0.94 2715 134 0.1115 0.1390 REMARK 3 5 2.4772 - 2.2997 0.94 2703 124 0.1043 0.1131 REMARK 3 6 2.2997 - 2.1641 0.95 2698 140 0.0955 0.1247 REMARK 3 7 2.1641 - 2.0558 0.96 2713 136 0.0930 0.1208 REMARK 3 8 2.0558 - 1.9663 0.96 2721 135 0.0922 0.1124 REMARK 3 9 1.9663 - 1.8906 0.96 2648 146 0.0891 0.0917 REMARK 3 10 1.8906 - 1.8253 0.95 2680 135 0.0818 0.1130 REMARK 3 11 1.8253 - 1.7683 0.96 2688 159 0.0829 0.1083 REMARK 3 12 1.7683 - 1.7177 0.96 2627 152 0.0832 0.1086 REMARK 3 13 1.7177 - 1.6725 0.95 2643 155 0.0778 0.0965 REMARK 3 14 1.6725 - 1.6317 0.95 2673 151 0.0792 0.1010 REMARK 3 15 1.6317 - 1.5946 0.96 2649 159 0.0785 0.1076 REMARK 3 16 1.5946 - 1.5607 0.96 2629 153 0.0815 0.1077 REMARK 3 17 1.5607 - 1.5295 0.95 2654 127 0.0861 0.1231 REMARK 3 18 1.5295 - 1.5006 0.95 2592 159 0.0854 0.1218 REMARK 3 19 1.5006 - 1.4738 0.94 2627 144 0.0893 0.1112 REMARK 3 20 1.4738 - 1.4488 0.95 2621 140 0.0934 0.1211 REMARK 3 21 1.4488 - 1.4254 0.95 2609 138 0.0934 0.1208 REMARK 3 22 1.4254 - 1.4035 0.95 2676 131 0.0947 0.1063 REMARK 3 23 1.4035 - 1.3829 0.93 2541 137 0.1043 0.1376 REMARK 3 24 1.3829 - 1.3634 0.93 2596 141 0.1017 0.1461 REMARK 3 25 1.3634 - 1.3450 0.93 2602 135 0.1143 0.1702 REMARK 3 26 1.3450 - 1.3275 0.92 2495 134 0.1218 0.1434 REMARK 3 27 1.3275 - 1.3109 0.93 2605 122 0.1237 0.1839 REMARK 3 28 1.3109 - 1.2951 0.92 2502 123 0.1334 0.1701 REMARK 3 29 1.2951 - 1.2801 0.91 2524 161 0.1412 0.1603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.77 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 55.43 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 9.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18940 REMARK 3 B22 (A**2) : -0.18940 REMARK 3 B33 (A**2) : 0.37870 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 2661 REMARK 3 ANGLE : 1.353 3679 REMARK 3 CHIRALITY : 0.088 385 REMARK 3 PLANARITY : 0.007 469 REMARK 3 DIHEDRAL : 13.510 942 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3T87 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067159. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : COLLIMATING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83248 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37800 REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 8TLN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS, 1.9 M CESIUM CHLORIDE, 50% REMARK 280 DMSO, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.70000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.40000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.55000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 109.25000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.85000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.70000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 87.40000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 109.25000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.55000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 382 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 383 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C2 DMS A 325 O HOH A 732 2.16 REMARK 500 O HOH A 592 O HOH A 805 2.16 REMARK 500 O HOH A 406 O HOH A 470 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 488 O HOH A 625 12555 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 26 -60.13 70.32 REMARK 500 SER A 92 -173.62 60.84 REMARK 500 SER A 107 -161.16 60.97 REMARK 500 THR A 152 -100.73 -119.89 REMARK 500 ASN A 159 -145.05 54.57 REMARK 500 THR A 194 74.92 44.51 REMARK 500 ILE A 232 -60.74 -101.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 326 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 142 NE2 REMARK 620 2 HIS A 146 NE2 102.3 REMARK 620 3 GLU A 166 OE2 125.4 96.7 REMARK 620 4 UBZ A 317 O23 112.1 126.5 95.3 REMARK 620 N 1 2 3 REMARK 630 REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE INHIBITOR REMARK 630 MOLECULE NAME: (2S)-2-({N-[(R)-({[(BENZYLOXY)CARBONYL]AMINO}METHYL) REMARK 630 (HYDROXY)PHOSPHORYL]-L-LEUCYL}AMINO)BUTANOIC ACID REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 UBZ A 317 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: PHQ PGL LEU ABA REMARK 630 DETAILS: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UBZ A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 325 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 326 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 327 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 328 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 329 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 330 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3T74 RELATED DB: PDB REMARK 900 RELATED ID: 3T73 RELATED DB: PDB REMARK 900 RELATED ID: 3FVP RELATED DB: PDB REMARK 900 RELATED ID: 3FV4 RELATED DB: PDB REMARK 900 RELATED ID: 3FWD RELATED DB: PDB REMARK 900 RELATED ID: 3FLF RELATED DB: PDB REMARK 900 RELATED ID: 3T8C RELATED DB: PDB REMARK 900 RELATED ID: 3T8D RELATED DB: PDB REMARK 900 RELATED ID: 3T8F RELATED DB: PDB REMARK 900 RELATED ID: 3T8G RELATED DB: PDB REMARK 900 RELATED ID: 3T8H RELATED DB: PDB DBREF 3T87 A 1 316 UNP P00800 THER_BACTH 233 548 SEQRES 1 A 316 ILE THR GLY THR SER THR VAL GLY VAL GLY ARG GLY VAL SEQRES 2 A 316 LEU GLY ASP GLN LYS ASN ILE ASN THR THR TYR SER THR SEQRES 3 A 316 TYR TYR TYR LEU GLN ASP ASN THR ARG GLY ASN GLY ILE SEQRES 4 A 316 PHE THR TYR ASP ALA LYS TYR ARG THR THR LEU PRO GLY SEQRES 5 A 316 SER LEU TRP ALA ASP ALA ASP ASN GLN PHE PHE ALA SER SEQRES 6 A 316 TYR ASP ALA PRO ALA VAL ASP ALA HIS TYR TYR ALA GLY SEQRES 7 A 316 VAL THR TYR ASP TYR TYR LYS ASN VAL HIS ASN ARG LEU SEQRES 8 A 316 SER TYR ASP GLY ASN ASN ALA ALA ILE ARG SER SER VAL SEQRES 9 A 316 HIS TYR SER GLN GLY TYR ASN ASN ALA PHE TRP ASN GLY SEQRES 10 A 316 SER GLN MET VAL TYR GLY ASP GLY ASP GLY GLN THR PHE SEQRES 11 A 316 ILE PRO LEU SER GLY GLY ILE ASP VAL VAL ALA HIS GLU SEQRES 12 A 316 LEU THR HIS ALA VAL THR ASP TYR THR ALA GLY LEU ILE SEQRES 13 A 316 TYR GLN ASN GLU SER GLY ALA ILE ASN GLU ALA ILE SER SEQRES 14 A 316 ASP ILE PHE GLY THR LEU VAL GLU PHE TYR ALA ASN LYS SEQRES 15 A 316 ASN PRO ASP TRP GLU ILE GLY GLU ASP VAL TYR THR PRO SEQRES 16 A 316 GLY ILE SER GLY ASP SER LEU ARG SER MET SER ASP PRO SEQRES 17 A 316 ALA LYS TYR GLY ASP PRO ASP HIS TYR SER LYS ARG TYR SEQRES 18 A 316 THR GLY THR GLN ASP ASN GLY GLY VAL HIS ILE ASN SER SEQRES 19 A 316 GLY ILE ILE ASN LYS ALA ALA TYR LEU ILE SER GLN GLY SEQRES 20 A 316 GLY THR HIS TYR GLY VAL SER VAL VAL GLY ILE GLY ARG SEQRES 21 A 316 ASP LYS LEU GLY LYS ILE PHE TYR ARG ALA LEU THR GLN SEQRES 22 A 316 TYR LEU THR PRO THR SER ASN PHE SER GLN LEU ARG ALA SEQRES 23 A 316 ALA ALA VAL GLN SER ALA THR ASP LEU TYR GLY SER THR SEQRES 24 A 316 SER GLN GLU VAL ALA SER VAL LYS GLN ALA PHE ASP ALA SEQRES 25 A 316 VAL GLY VAL LYS HET UBZ A 317 34 HET GOL A 318 6 HET GOL A 319 6 HET GOL A 320 8 HET DMS A 321 4 HET DMS A 322 4 HET DMS A 323 4 HET DMS A 324 4 HET DMS A 325 4 HET ZN A 326 1 HET CA A 327 1 HET CA A 328 1 HET CA A 329 1 HET CA A 330 1 HETNAM UBZ (2S)-2-({N-[(R)-({[(BENZYLOXY)CARBONYL]AMINO}METHYL) HETNAM 2 UBZ (HYDROXY)PHOSPHORYL]-L-LEUCYL}AMINO)BUTANOIC ACID HETNAM GOL GLYCEROL HETNAM DMS DIMETHYL SULFOXIDE HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 UBZ C19 H30 N3 O7 P FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 DMS 5(C2 H6 O S) FORMUL 11 ZN ZN 2+ FORMUL 12 CA 4(CA 2+) FORMUL 16 HOH *481(H2 O) HELIX 1 1 ALA A 64 TYR A 66 5 3 HELIX 2 2 ASP A 67 ASN A 89 1 23 HELIX 3 3 PRO A 132 GLY A 135 5 4 HELIX 4 4 GLY A 136 THR A 152 1 17 HELIX 5 5 GLN A 158 ASN A 181 1 24 HELIX 6 6 ASP A 207 GLY A 212 5 6 HELIX 7 7 HIS A 216 ARG A 220 5 5 HELIX 8 8 THR A 224 VAL A 230 1 7 HELIX 9 9 ASN A 233 GLY A 247 1 15 HELIX 10 10 GLY A 259 TYR A 274 1 16 HELIX 11 11 ASN A 280 GLY A 297 1 18 HELIX 12 12 SER A 300 VAL A 313 1 14 SHEET 1 A 5 ALA A 56 ASP A 57 0 SHEET 2 A 5 TYR A 28 TYR A 29 -1 N TYR A 28 O ASP A 57 SHEET 3 A 5 GLN A 17 TYR A 24 -1 N THR A 23 O TYR A 29 SHEET 4 A 5 THR A 4 ARG A 11 -1 N GLY A 8 O ILE A 20 SHEET 5 A 5 GLN A 61 PHE A 62 1 O PHE A 62 N VAL A 9 SHEET 1 B 3 GLN A 31 ASP A 32 0 SHEET 2 B 3 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 3 B 3 SER A 53 LEU A 54 -1 O SER A 53 N ASP A 43 SHEET 1 C 5 GLN A 31 ASP A 32 0 SHEET 2 C 5 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 3 C 5 ILE A 100 TYR A 106 1 O ILE A 100 N PHE A 40 SHEET 4 C 5 MET A 120 GLY A 123 1 O MET A 120 N ARG A 101 SHEET 5 C 5 ALA A 113 TRP A 115 -1 N PHE A 114 O VAL A 121 SHEET 1 D 2 GLU A 187 ILE A 188 0 SHEET 2 D 2 ARG A 203 SER A 204 -1 O ARG A 203 N ILE A 188 SHEET 1 E 2 GLY A 248 HIS A 250 0 SHEET 2 E 2 VAL A 253 VAL A 255 -1 O VAL A 255 N GLY A 248 LINK NE2 HIS A 142 ZN ZN A 326 1555 1555 2.04 LINK NE2 HIS A 146 ZN ZN A 326 1555 1555 2.03 LINK OE2 GLU A 166 ZN ZN A 326 1555 1555 1.98 LINK O23 UBZ A 317 ZN ZN A 326 1555 1555 1.98 CISPEP 1 LEU A 50 PRO A 51 0 5.65 SITE 1 AC1 19 TYR A 106 ASN A 112 ALA A 113 PHE A 114 SITE 2 AC1 19 TRP A 115 HIS A 142 GLU A 143 HIS A 146 SITE 3 AC1 19 TYR A 157 GLU A 166 LEU A 202 ARG A 203 SITE 4 AC1 19 HIS A 231 GOL A 319 DMS A 321 ZN A 326 SITE 5 AC1 19 HOH A 621 HOH A 633 HOH A 683 SITE 1 AC2 6 GLY A 109 TYR A 110 ASN A 111 ASN A 112 SITE 2 AC2 6 HOH A 674 HOH A 713 SITE 1 AC3 8 PHE A 114 TRP A 115 HIS A 146 TYR A 157 SITE 2 AC3 8 UBZ A 317 HOH A 490 HOH A 515 HOH A 537 SITE 1 AC4 11 GLY A 247 GLY A 248 THR A 249 VAL A 255 SITE 2 AC4 11 GLN A 273 LEU A 275 HOH A 535 HOH A 573 SITE 3 AC4 11 HOH A 588 HOH A 635 HOH A 658 SITE 1 AC5 6 TYR A 110 ASN A 112 PHE A 114 UBZ A 317 SITE 2 AC5 6 HOH A 793 HOH A 802 SITE 1 AC6 5 ILE A 1 THR A 2 GLY A 3 GLN A 31 SITE 2 AC6 5 ASN A 33 SITE 1 AC7 7 TYR A 66 HIS A 216 SER A 218 TYR A 251 SITE 2 AC7 7 HOH A 351 HOH A 412 HOH A 647 SITE 1 AC8 6 THR A 4 TYR A 24 SER A 25 TYR A 28 SITE 2 AC8 6 HOH A 717 HOH A 722 SITE 1 AC9 6 GLY A 95 PRO A 184 TRP A 186 HOH A 570 SITE 2 AC9 6 HOH A 732 HOH A 739 SITE 1 BC1 4 HIS A 142 HIS A 146 GLU A 166 UBZ A 317 SITE 1 BC2 6 ASP A 138 GLU A 177 ASP A 185 GLU A 187 SITE 2 BC2 6 GLU A 190 HOH A 785 SITE 1 BC3 6 GLU A 177 ASN A 183 ASP A 185 GLU A 190 SITE 2 BC3 6 HOH A 790 HOH A 791 SITE 1 BC4 6 TYR A 193 THR A 194 ILE A 197 ASP A 200 SITE 2 BC4 6 HOH A 788 HOH A 792 SITE 1 BC5 6 ASP A 57 ASP A 59 GLN A 61 HOH A 786 SITE 2 BC5 6 HOH A 787 HOH A 789 CRYST1 92.700 92.700 131.100 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010787 0.006228 0.000000 0.00000 SCALE2 0.000000 0.012456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007628 0.00000