HEADER IMMUNE SYSTEM 02-AUG-11 3T8X TITLE CRYSTAL STRUCTURE OF HUMAN CD1B IN COMPLEX WITH SYNTHETIC ANTIGENIC TITLE 2 DIACYLSULFOGLYCOLIPID SGL12 AND ENDOGENOUS SPACER CAVEAT 3T8X FUC E 2 HAS WRONG CHIRALITY AT ATOM C1 FUC G 2 HAS WRONG CAVEAT 2 3T8X CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: T-CELL SURFACE GLYCOPROTEIN CD1B; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 19-298; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD1B; SOURCE 6 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PLASMACYTOMA J558; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BCMGSNEO; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 16 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: PLASMACYTOMA J558; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: BCMGSNEO KEYWDS ENDOGENOUS SPACER LIGAND, MYCOBACTERIAL DIACYLSULFOGLYCOLIPID, MHC, KEYWDS 2 GLYCOPROTEIN, IMMUNE SYSTEM, IMMUNOGLOBULIN DOMAIN/MHC I, ANTIGEN KEYWDS 3 PRESENTATION, GLYCOLIPID ANTIGEN BINDING, GLYCOSYLATION, CELL KEYWDS 4 MEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR L.F.GARCIA-ALLES,L.MAVEYRAUD,L.MOUREY,S.JULIEN REVDAT 3 13-SEP-23 3T8X 1 HETSYN REVDAT 2 29-JUL-20 3T8X 1 CAVEAT COMPND REMARK SEQADV REVDAT 2 2 1 HETNAM LINK SITE ATOM REVDAT 1 26-OCT-11 3T8X 0 JRNL AUTH L.F.GARCIA-ALLES,A.COLLMANN,C.VERSLUIS,B.LINDNER,J.GUIARD, JRNL AUTH 2 L.MAVEYRAUD,E.HUC,J.S.IM,S.SANSANO,T.BRANDO,S.JULIEN, JRNL AUTH 3 J.PRANDI,M.GILLERON,S.A.PORCELLI,H.DE LA SALLE,A.J.R.HECK, JRNL AUTH 4 L.MORI,G.PUZO,L.MOUREY,G.DE LIBERO JRNL TITL STRUCTURAL REORGANIZATION OF THE HUMAN CD1B ANTIGEN-BINDING JRNL TITL 2 GROOVE FOR PRESENTATION OF MYCOBACTERIAL SULFOGLYCOLIPIDS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 76823 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4044 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3381 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 55.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 180 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5869 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 376 REMARK 3 SOLVENT ATOMS : 525 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.588 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6457 ; 0.024 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4467 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8758 ; 2.183 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10381 ; 1.229 ; 3.011 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 754 ; 6.896 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 280 ;33.081 ;23.893 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 938 ;13.914 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;19.966 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 950 ; 0.235 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6953 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1335 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3743 ; 1.219 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1533 ; 0.372 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6003 ; 2.140 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2723 ; 3.331 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2775 ; 5.292 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 278 REMARK 3 RESIDUE RANGE : A 1001 A 1002 REMARK 3 RESIDUE RANGE : A 1011 A 1016 REMARK 3 RESIDUE RANGE : A 1111 A 1111 REMARK 3 ORIGIN FOR THE GROUP (A): 48.5750 -31.0380 26.1460 REMARK 3 T TENSOR REMARK 3 T11: 0.0339 T22: 0.0299 REMARK 3 T33: 0.0227 T12: -0.0191 REMARK 3 T13: -0.0017 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.2722 L22: 0.4587 REMARK 3 L33: 0.2668 L12: 0.0890 REMARK 3 L13: -0.1158 L23: -0.0437 REMARK 3 S TENSOR REMARK 3 S11: -0.0384 S12: 0.0217 S13: -0.0138 REMARK 3 S21: 0.0361 S22: 0.0333 S23: -0.0327 REMARK 3 S31: -0.0011 S32: 0.0377 S33: 0.0051 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2060 -16.4890 16.4730 REMARK 3 T TENSOR REMARK 3 T11: 0.0838 T22: 0.0341 REMARK 3 T33: 0.0042 T12: -0.0227 REMARK 3 T13: -0.0082 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.5158 L22: 0.7174 REMARK 3 L33: 0.9854 L12: 0.0762 REMARK 3 L13: -0.3482 L23: -0.3495 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: 0.0920 S13: 0.0136 REMARK 3 S21: -0.0832 S22: 0.0060 S23: 0.0473 REMARK 3 S31: -0.0407 S32: -0.0112 S33: -0.0219 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 282 REMARK 3 RESIDUE RANGE : C 2021 C 2022 REMARK 3 RESIDUE RANGE : C 2031 C 2033 REMARK 3 ORIGIN FOR THE GROUP (A): 70.2570 -14.8240 67.7910 REMARK 3 T TENSOR REMARK 3 T11: 0.0186 T22: 0.0498 REMARK 3 T33: 0.0417 T12: 0.0279 REMARK 3 T13: -0.0040 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.7622 L22: 0.0935 REMARK 3 L33: 0.2226 L12: 0.0355 REMARK 3 L13: 0.2541 L23: -0.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.0407 S12: 0.0669 S13: 0.0700 REMARK 3 S21: -0.0114 S22: -0.0230 S23: 0.0294 REMARK 3 S31: 0.0566 S32: 0.0718 S33: -0.0177 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 99 REMARK 3 ORIGIN FOR THE GROUP (A): 68.7060 -30.1140 58.0270 REMARK 3 T TENSOR REMARK 3 T11: 0.0570 T22: 0.0797 REMARK 3 T33: 0.0615 T12: 0.0617 REMARK 3 T13: -0.0488 T23: -0.0603 REMARK 3 L TENSOR REMARK 3 L11: 1.8529 L22: 0.4680 REMARK 3 L33: 2.9482 L12: -0.0714 REMARK 3 L13: 1.3441 L23: 0.3237 REMARK 3 S TENSOR REMARK 3 S11: 0.1870 S12: 0.1886 S13: -0.2802 REMARK 3 S21: -0.0114 S22: -0.0712 S23: 0.0341 REMARK 3 S31: 0.2011 S32: 0.0698 S33: -0.1159 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3T8X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067185. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81026 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 36.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36200 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2H26 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M AMMONIUM SULFATE, 0.2 M AMMONIUM REMARK 280 ACETATE, PH 6.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 101.62500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.79000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 101.62500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.79000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 HIS A 2 REMARK 465 ALA A 3 REMARK 465 ASN A 279 REMARK 465 PRO A 280 REMARK 465 ILE A 281 REMARK 465 ASP A 282 REMARK 465 LYS A 283 REMARK 465 LEU A 284 REMARK 465 GLY A 285 REMARK 465 GLY A 286 REMARK 465 GLY A 287 REMARK 465 LEU A 288 REMARK 465 ASN A 289 REMARK 465 ASP A 290 REMARK 465 ILE A 291 REMARK 465 PHE A 292 REMARK 465 GLU A 293 REMARK 465 ALA A 294 REMARK 465 GLN A 295 REMARK 465 LYS A 296 REMARK 465 ILE A 297 REMARK 465 GLU A 298 REMARK 465 TRP A 299 REMARK 465 HIS A 300 REMARK 465 GLU A 301 REMARK 465 GLU C 1 REMARK 465 HIS C 2 REMARK 465 ALA C 3 REMARK 465 PHE C 4 REMARK 465 GLN C 5 REMARK 465 LYS C 283 REMARK 465 LEU C 284 REMARK 465 GLY C 285 REMARK 465 GLY C 286 REMARK 465 GLY C 287 REMARK 465 LEU C 288 REMARK 465 ASN C 289 REMARK 465 ASP C 290 REMARK 465 ILE C 291 REMARK 465 PHE C 292 REMARK 465 GLU C 293 REMARK 465 ALA C 294 REMARK 465 GLN C 295 REMARK 465 LYS C 296 REMARK 465 ILE C 297 REMARK 465 GLU C 298 REMARK 465 TRP C 299 REMARK 465 HIS C 300 REMARK 465 GLU C 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 61 CE NZ REMARK 470 LYS A 91 CE NZ REMARK 470 SER A 106 OG REMARK 470 ASP A 253 CG OD1 OD2 REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 19 CE NZ REMARK 470 GLU B 44 CD OE1 OE2 REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 LYS B 58 NZ REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 GLU B 77 CD OE1 OE2 REMARK 470 LYS B 91 CE NZ REMARK 470 LYS C 61 CG CD CE NZ REMARK 470 GLU C 68 CD OE1 OE2 REMARK 470 ASP C 87 OD1 OD2 REMARK 470 LYS C 91 CG CD CE NZ REMARK 470 LYS C 127 CD CE NZ REMARK 470 ILE C 148 CD1 REMARK 470 GLN C 150 OE1 NE2 REMARK 470 GLN C 152 CG CD OE1 NE2 REMARK 470 LYS C 178 CE NZ REMARK 470 ARG C 183 CD NE CZ NH1 NH2 REMARK 470 SER C 196 CB OG REMARK 470 ARG C 201 NH1 NH2 REMARK 470 GLU C 224 CG CD OE1 OE2 REMARK 470 ARG C 278 CZ NH1 NH2 REMARK 470 ASN C 279 CB CG OD1 ND2 REMARK 470 ASP C 282 O CG OD1 OD2 REMARK 470 LYS D 19 CG CD CE NZ REMARK 470 GLU D 47 CG CD OE1 OE2 REMARK 470 LYS D 48 CG CD CE NZ REMARK 470 GLU D 50 CD OE1 OE2 REMARK 470 LYS D 58 CD CE NZ REMARK 470 GLU D 74 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE MET C 219 O HOH C 472 1.97 REMARK 500 CG2 THR C 22 O HOH C 311 2.00 REMARK 500 C56 T8X A 304 CAA ULI A 305 2.11 REMARK 500 O3 MAN F 4 O HOH A 473 2.17 REMARK 500 O HOH A 407 O HOH A 428 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 490 O HOH C 479 4546 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 243 CE2 TRP A 243 CD2 0.081 REMARK 500 TRP B 60 CE2 TRP B 60 CD2 0.073 REMARK 500 HIS D 31 CG HIS D 31 CD2 0.060 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 34 CB - CG - OD1 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 71 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 79 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 83 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 272 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG C 168 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 MET C 219 CG - SD - CE ANGL. DEV. = -10.5 DEGREES REMARK 500 ASP D 59 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 -114.99 50.82 REMARK 500 ASN A 128 62.99 39.02 REMARK 500 TRP B 60 -1.07 78.47 REMARK 500 ASP C 33 -115.24 44.00 REMARK 500 ALA C 129 12.63 59.15 REMARK 500 ASN D 42 59.29 33.16 REMARK 500 TRP D 60 -3.90 81.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 T8X C 304 REMARK 610 ULI C 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H26 RELATED DB: PDB REMARK 900 APO-CD1B, NO EXOGENOUS LIPID ADDED DBREF 3T8X A 1 280 UNP P29016 CD1B_HUMAN 19 298 DBREF 3T8X B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3T8X C 1 280 UNP P29016 CD1B_HUMAN 19 298 DBREF 3T8X D 1 99 UNP P61769 B2MG_HUMAN 21 119 SEQADV 3T8X ILE A 281 UNP P29016 EXPRESSION TAG SEQADV 3T8X ASP A 282 UNP P29016 EXPRESSION TAG SEQADV 3T8X LYS A 283 UNP P29016 EXPRESSION TAG SEQADV 3T8X LEU A 284 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLY A 285 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLY A 286 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLY A 287 UNP P29016 EXPRESSION TAG SEQADV 3T8X LEU A 288 UNP P29016 EXPRESSION TAG SEQADV 3T8X ASN A 289 UNP P29016 EXPRESSION TAG SEQADV 3T8X ASP A 290 UNP P29016 EXPRESSION TAG SEQADV 3T8X ILE A 291 UNP P29016 EXPRESSION TAG SEQADV 3T8X PHE A 292 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLU A 293 UNP P29016 EXPRESSION TAG SEQADV 3T8X ALA A 294 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLN A 295 UNP P29016 EXPRESSION TAG SEQADV 3T8X LYS A 296 UNP P29016 EXPRESSION TAG SEQADV 3T8X ILE A 297 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLU A 298 UNP P29016 EXPRESSION TAG SEQADV 3T8X TRP A 299 UNP P29016 EXPRESSION TAG SEQADV 3T8X HIS A 300 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLU A 301 UNP P29016 EXPRESSION TAG SEQADV 3T8X ILE C 281 UNP P29016 EXPRESSION TAG SEQADV 3T8X ASP C 282 UNP P29016 EXPRESSION TAG SEQADV 3T8X LYS C 283 UNP P29016 EXPRESSION TAG SEQADV 3T8X LEU C 284 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLY C 285 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLY C 286 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLY C 287 UNP P29016 EXPRESSION TAG SEQADV 3T8X LEU C 288 UNP P29016 EXPRESSION TAG SEQADV 3T8X ASN C 289 UNP P29016 EXPRESSION TAG SEQADV 3T8X ASP C 290 UNP P29016 EXPRESSION TAG SEQADV 3T8X ILE C 291 UNP P29016 EXPRESSION TAG SEQADV 3T8X PHE C 292 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLU C 293 UNP P29016 EXPRESSION TAG SEQADV 3T8X ALA C 294 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLN C 295 UNP P29016 EXPRESSION TAG SEQADV 3T8X LYS C 296 UNP P29016 EXPRESSION TAG SEQADV 3T8X ILE C 297 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLU C 298 UNP P29016 EXPRESSION TAG SEQADV 3T8X TRP C 299 UNP P29016 EXPRESSION TAG SEQADV 3T8X HIS C 300 UNP P29016 EXPRESSION TAG SEQADV 3T8X GLU C 301 UNP P29016 EXPRESSION TAG SEQRES 1 A 301 GLU HIS ALA PHE GLN GLY PRO THR SER PHE HIS VAL ILE SEQRES 2 A 301 GLN THR SER SER PHE THR ASN SER THR TRP ALA GLN THR SEQRES 3 A 301 GLN GLY SER GLY TRP LEU ASP ASP LEU GLN ILE HIS GLY SEQRES 4 A 301 TRP ASP SER ASP SER GLY THR ALA ILE PHE LEU LYS PRO SEQRES 5 A 301 TRP SER LYS GLY ASN PHE SER ASP LYS GLU VAL ALA GLU SEQRES 6 A 301 LEU GLU GLU ILE PHE ARG VAL TYR ILE PHE GLY PHE ALA SEQRES 7 A 301 ARG GLU VAL GLN ASP PHE ALA GLY ASP PHE GLN MET LYS SEQRES 8 A 301 TYR PRO PHE GLU ILE GLN GLY ILE ALA GLY CYS GLU LEU SEQRES 9 A 301 HIS SER GLY GLY ALA ILE VAL SER PHE LEU ARG GLY ALA SEQRES 10 A 301 LEU GLY GLY LEU ASP PHE LEU SER VAL LYS ASN ALA SER SEQRES 11 A 301 CYS VAL PRO SER PRO GLU GLY GLY SER ARG ALA GLN LYS SEQRES 12 A 301 PHE CYS ALA LEU ILE ILE GLN TYR GLN GLY ILE MET GLU SEQRES 13 A 301 THR VAL ARG ILE LEU LEU TYR GLU THR CYS PRO ARG TYR SEQRES 14 A 301 LEU LEU GLY VAL LEU ASN ALA GLY LYS ALA ASP LEU GLN SEQRES 15 A 301 ARG GLN VAL LYS PRO GLU ALA TRP LEU SER SER GLY PRO SEQRES 16 A 301 SER PRO GLY PRO GLY ARG LEU GLN LEU VAL CYS HIS VAL SEQRES 17 A 301 SER GLY PHE TYR PRO LYS PRO VAL TRP VAL MET TRP MET SEQRES 18 A 301 ARG GLY GLU GLN GLU GLN GLN GLY THR GLN LEU GLY ASP SEQRES 19 A 301 ILE LEU PRO ASN ALA ASN TRP THR TRP TYR LEU ARG ALA SEQRES 20 A 301 THR LEU ASP VAL ALA ASP GLY GLU ALA ALA GLY LEU SER SEQRES 21 A 301 CYS ARG VAL LYS HIS SER SER LEU GLU GLY GLN ASP ILE SEQRES 22 A 301 ILE LEU TYR TRP ARG ASN PRO ILE ASP LYS LEU GLY GLY SEQRES 23 A 301 GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU TRP SEQRES 24 A 301 HIS GLU SEQRES 1 B 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 B 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 B 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 B 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 B 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 B 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 B 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 301 GLU HIS ALA PHE GLN GLY PRO THR SER PHE HIS VAL ILE SEQRES 2 C 301 GLN THR SER SER PHE THR ASN SER THR TRP ALA GLN THR SEQRES 3 C 301 GLN GLY SER GLY TRP LEU ASP ASP LEU GLN ILE HIS GLY SEQRES 4 C 301 TRP ASP SER ASP SER GLY THR ALA ILE PHE LEU LYS PRO SEQRES 5 C 301 TRP SER LYS GLY ASN PHE SER ASP LYS GLU VAL ALA GLU SEQRES 6 C 301 LEU GLU GLU ILE PHE ARG VAL TYR ILE PHE GLY PHE ALA SEQRES 7 C 301 ARG GLU VAL GLN ASP PHE ALA GLY ASP PHE GLN MET LYS SEQRES 8 C 301 TYR PRO PHE GLU ILE GLN GLY ILE ALA GLY CYS GLU LEU SEQRES 9 C 301 HIS SER GLY GLY ALA ILE VAL SER PHE LEU ARG GLY ALA SEQRES 10 C 301 LEU GLY GLY LEU ASP PHE LEU SER VAL LYS ASN ALA SER SEQRES 11 C 301 CYS VAL PRO SER PRO GLU GLY GLY SER ARG ALA GLN LYS SEQRES 12 C 301 PHE CYS ALA LEU ILE ILE GLN TYR GLN GLY ILE MET GLU SEQRES 13 C 301 THR VAL ARG ILE LEU LEU TYR GLU THR CYS PRO ARG TYR SEQRES 14 C 301 LEU LEU GLY VAL LEU ASN ALA GLY LYS ALA ASP LEU GLN SEQRES 15 C 301 ARG GLN VAL LYS PRO GLU ALA TRP LEU SER SER GLY PRO SEQRES 16 C 301 SER PRO GLY PRO GLY ARG LEU GLN LEU VAL CYS HIS VAL SEQRES 17 C 301 SER GLY PHE TYR PRO LYS PRO VAL TRP VAL MET TRP MET SEQRES 18 C 301 ARG GLY GLU GLN GLU GLN GLN GLY THR GLN LEU GLY ASP SEQRES 19 C 301 ILE LEU PRO ASN ALA ASN TRP THR TRP TYR LEU ARG ALA SEQRES 20 C 301 THR LEU ASP VAL ALA ASP GLY GLU ALA ALA GLY LEU SER SEQRES 21 C 301 CYS ARG VAL LYS HIS SER SER LEU GLU GLY GLN ASP ILE SEQRES 22 C 301 ILE LEU TYR TRP ARG ASN PRO ILE ASP LYS LEU GLY GLY SEQRES 23 C 301 GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU TRP SEQRES 24 C 301 HIS GLU SEQRES 1 D 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 D 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 D 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 D 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 D 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 D 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 D 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 D 99 ILE VAL LYS TRP ASP ARG ASP MET MODRES 3T8X ASN C 57 ASN GLYCOSYLATION SITE MODRES 3T8X ASN A 57 ASN GLYCOSYLATION SITE MODRES 3T8X ASN A 20 ASN GLYCOSYLATION SITE MODRES 3T8X ASN C 20 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET FUC E 2 10 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET FUC F 5 10 HET NAG G 1 14 HET FUC G 2 10 HET NAG H 1 14 HET NAG H 2 14 HET FUC H 3 10 HET SO4 A 302 5 HET ACT A 303 4 HET T8X A 304 73 HET ULI A 305 40 HET GOL B 100 6 HET GOL B 101 6 HET SO4 C 302 5 HET SO4 C 303 5 HET T8X C 304 31 HET ULI C 305 39 HET SO4 D 100 5 HET SO4 D 101 5 HET GOL D 102 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM T8X 2-O-SULFO-ALPHA-D-GLUCOPYRANOSYL 2-O-HEXADECANOYL-3-O- HETNAM 2 T8X [(2E,4S,6S,8S)-2,4,6,8-TETRAMETHYLTETRACOS-2-ENOYL]- HETNAM 3 T8X ALPHA-D-GLUCOPYRANOSIDE HETNAM ULI TETRACONTANE HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN T8X 2-PALMITOYL-3-[2S,4S,6S,8S-TETRAMETHYL-TRANS-2- HETSYN 2 T8X TETRACOSENOYL]-2'-SULFATE-ALPHA-ALPHA'-D-TREHALOSE HETSYN ULI N-TETRACONTANE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 NAG 6(C8 H15 N O6) FORMUL 5 FUC 4(C6 H12 O5) FORMUL 6 BMA C6 H12 O6 FORMUL 6 MAN C6 H12 O6 FORMUL 9 SO4 5(O4 S 2-) FORMUL 10 ACT C2 H3 O2 1- FORMUL 11 T8X 2(C56 H104 O16 S) FORMUL 12 ULI 2(C40 H82) FORMUL 13 GOL 3(C3 H8 O3) FORMUL 22 HOH *525(H2 O) HELIX 1 1 SER A 59 ALA A 85 1 27 HELIX 2 2 GLY A 137 ILE A 149 1 13 HELIX 3 3 GLY A 153 GLU A 164 1 12 HELIX 4 4 GLU A 164 GLY A 177 1 14 HELIX 5 5 GLY A 177 GLN A 182 1 6 HELIX 6 6 HIS A 265 GLU A 269 5 5 HELIX 7 7 SER C 59 ALA C 85 1 27 HELIX 8 8 SER C 106 GLY C 108 5 3 HELIX 9 9 GLY C 137 ILE C 149 1 13 HELIX 10 10 TYR C 151 GLU C 164 1 14 HELIX 11 11 GLU C 164 GLY C 177 1 14 HELIX 12 12 GLY C 177 GLN C 182 1 6 HELIX 13 13 HIS C 265 GLU C 269 5 5 SHEET 1 A 8 THR A 46 PHE A 49 0 SHEET 2 A 8 LEU A 35 ASP A 41 -1 N ASP A 41 O THR A 46 SHEET 3 A 8 TRP A 23 LEU A 32 -1 N LEU A 32 O LEU A 35 SHEET 4 A 8 SER A 9 ASN A 20 -1 N HIS A 11 O TRP A 31 SHEET 5 A 8 PHE A 94 LEU A 104 -1 O ILE A 96 N SER A 16 SHEET 6 A 8 ILE A 110 LEU A 118 -1 O ARG A 115 N ILE A 99 SHEET 7 A 8 LEU A 121 LYS A 127 -1 O PHE A 123 N GLY A 116 SHEET 8 A 8 SER A 130 PRO A 133 -1 O VAL A 132 N SER A 125 SHEET 1 B 4 GLU A 188 SER A 193 0 SHEET 2 B 4 ARG A 201 PHE A 211 -1 O HIS A 207 N TRP A 190 SHEET 3 B 4 THR A 242 ALA A 252 -1 O LEU A 249 N LEU A 204 SHEET 4 B 4 GLN A 231 LEU A 232 -1 N GLN A 231 O THR A 248 SHEET 1 C 4 GLU A 188 SER A 193 0 SHEET 2 C 4 ARG A 201 PHE A 211 -1 O HIS A 207 N TRP A 190 SHEET 3 C 4 THR A 242 ALA A 252 -1 O LEU A 249 N LEU A 204 SHEET 4 C 4 LEU A 236 ASN A 238 -1 N LEU A 236 O TYR A 244 SHEET 1 D 4 GLN A 225 GLU A 226 0 SHEET 2 D 4 TRP A 217 ARG A 222 -1 N ARG A 222 O GLN A 225 SHEET 3 D 4 LEU A 259 LYS A 264 -1 O ARG A 262 N MET A 219 SHEET 4 D 4 ILE A 273 TYR A 276 -1 O ILE A 273 N VAL A 263 SHEET 1 E 4 LYS B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O TYR B 26 N GLN B 8 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 E 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 F 4 LYS B 6 SER B 11 0 SHEET 2 F 4 ASN B 21 PHE B 30 -1 O TYR B 26 N GLN B 8 SHEET 3 F 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 F 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 G 4 GLU B 44 ARG B 45 0 SHEET 2 G 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 G 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 G 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 H 8 THR C 46 PHE C 49 0 SHEET 2 H 8 LEU C 35 ASP C 41 -1 N ASP C 41 O THR C 46 SHEET 3 H 8 TRP C 23 LEU C 32 -1 N LEU C 32 O LEU C 35 SHEET 4 H 8 SER C 9 ASN C 20 -1 N SER C 17 O GLN C 25 SHEET 5 H 8 PHE C 94 LEU C 104 -1 O ILE C 96 N SER C 16 SHEET 6 H 8 ILE C 110 LEU C 118 -1 O ARG C 115 N ILE C 99 SHEET 7 H 8 LEU C 121 LYS C 127 -1 O PHE C 123 N GLY C 116 SHEET 8 H 8 SER C 130 PRO C 133 -1 O VAL C 132 N SER C 125 SHEET 1 I 4 GLU C 188 GLY C 194 0 SHEET 2 I 4 ARG C 201 PHE C 211 -1 O HIS C 207 N TRP C 190 SHEET 3 I 4 TRP C 243 ALA C 252 -1 O LEU C 249 N LEU C 204 SHEET 4 I 4 GLN C 231 LEU C 232 -1 N GLN C 231 O THR C 248 SHEET 1 J 4 GLU C 188 GLY C 194 0 SHEET 2 J 4 ARG C 201 PHE C 211 -1 O HIS C 207 N TRP C 190 SHEET 3 J 4 TRP C 243 ALA C 252 -1 O LEU C 249 N LEU C 204 SHEET 4 J 4 LEU C 236 PRO C 237 -1 N LEU C 236 O TYR C 244 SHEET 1 K 4 GLN C 225 GLU C 226 0 SHEET 2 K 4 TRP C 217 ARG C 222 -1 N ARG C 222 O GLN C 225 SHEET 3 K 4 LEU C 259 LYS C 264 -1 O SER C 260 N MET C 221 SHEET 4 K 4 ILE C 273 TYR C 276 -1 O LEU C 275 N CYS C 261 SHEET 1 L 4 LYS D 6 SER D 11 0 SHEET 2 L 4 ASN D 21 PHE D 30 -1 O SER D 28 N LYS D 6 SHEET 3 L 4 PHE D 62 PHE D 70 -1 O TYR D 66 N CYS D 25 SHEET 4 L 4 GLU D 50 HIS D 51 -1 N GLU D 50 O TYR D 67 SHEET 1 M 4 LYS D 6 SER D 11 0 SHEET 2 M 4 ASN D 21 PHE D 30 -1 O SER D 28 N LYS D 6 SHEET 3 M 4 PHE D 62 PHE D 70 -1 O TYR D 66 N CYS D 25 SHEET 4 M 4 SER D 55 PHE D 56 -1 N SER D 55 O TYR D 63 SHEET 1 N 4 GLU D 44 ARG D 45 0 SHEET 2 N 4 GLU D 36 LYS D 41 -1 N LYS D 41 O GLU D 44 SHEET 3 N 4 TYR D 78 ASN D 83 -1 O ARG D 81 N ASP D 38 SHEET 4 N 4 LYS D 91 LYS D 94 -1 O LYS D 91 N VAL D 82 SSBOND 1 CYS A 102 CYS A 166 1555 1555 2.32 SSBOND 2 CYS A 131 CYS A 145 1555 1555 2.16 SSBOND 3 CYS A 206 CYS A 261 1555 1555 2.02 SSBOND 4 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 5 CYS C 102 CYS C 166 1555 1555 2.28 SSBOND 6 CYS C 131 CYS C 145 1555 1555 2.18 SSBOND 7 CYS C 206 CYS C 261 1555 1555 2.04 SSBOND 8 CYS D 25 CYS D 80 1555 1555 2.06 LINK ND2 ASN A 20 C1 NAG E 1 1555 1555 1.46 LINK ND2 ASN A 57 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN C 20 C1 NAG G 1 1555 1555 1.51 LINK ND2 ASN C 57 C1 NAG H 1 1555 1555 1.44 LINK O6 NAG E 1 C1 FUC E 2 1555 1555 1.42 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.43 LINK O6 NAG F 1 C1 FUC F 5 1555 1555 1.38 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.46 LINK O6 BMA F 3 C1 MAN F 4 1555 1555 1.46 LINK O6 NAG G 1 C1 FUC G 2 1555 1555 1.43 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.43 LINK O6 NAG H 1 C1 FUC H 3 1555 1555 1.41 CISPEP 1 TYR A 92 PRO A 93 0 -3.54 CISPEP 2 TYR A 212 PRO A 213 0 2.21 CISPEP 3 HIS B 31 PRO B 32 0 7.13 CISPEP 4 TYR C 92 PRO C 93 0 1.76 CISPEP 5 TYR C 212 PRO C 213 0 6.47 CISPEP 6 HIS D 31 PRO D 32 0 -1.39 CRYST1 203.250 67.580 88.190 90.00 112.26 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004920 0.000000 0.002014 0.00000 SCALE2 0.000000 0.014797 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012252 0.00000