HEADER HYDROLASE 03-AUG-11 3T9Q TITLE STRUCTURE OF THE PHOSPHATASE DOMAIN OF THE CELL FATE DETERMINANT TITLE 2 SPOIIE FROM BACILLUS SUBTILIS (MN PRESOAKED) COMPND MOL_ID: 1; COMPND 2 MOLECULE: STAGE II SPORULATION PROTEIN E; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 590-827; COMPND 5 SYNONYM: STAGE II SPORULATION PROTEIN H; COMPND 6 EC: 3.1.3.16; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BSU00640, SPOIIE, SPOIIH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-YSBLIC KEYWDS SPOIIE, PHOSPHATASE, SPORULATION, MANGANESE BINDING, PP2C PHOSPHATASE KEYWDS 2 DOMAIN, DEPHOSPHORYLATING THE ANTI-SIGMA FACTOR ANTAGONIST SPOIIAA, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.M.LEVDIKOV,E.V.BLAGOVA,A.J.WILKINSON REVDAT 4 13-SEP-23 3T9Q 1 HETSYN REVDAT 3 29-JUL-20 3T9Q 1 REMARK SEQADV LINK SITE REVDAT 2 23-MAY-12 3T9Q 1 JRNL REVDAT 1 07-DEC-11 3T9Q 0 JRNL AUTH V.M.LEVDIKOV,E.V.BLAGOVA,A.E.RAWLINGS,K.JAMESON,J.TUNALEY, JRNL AUTH 2 D.J.HART,I.BARAK,A.J.WILKINSON JRNL TITL STRUCTURE OF THE PHOSPHATASE DOMAIN OF THE CELL FATE JRNL TITL 2 DETERMINANT SPOIIE FROM BACILLUS SUBTILIS. JRNL REF J.MOL.BIOL. V. 415 343 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22115775 JRNL DOI 10.1016/J.JMB.2011.11.017 REMARK 2 REMARK 2 RESOLUTION. 2.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0086 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 979 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1273 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3411 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.15000 REMARK 3 B22 (A**2) : 2.15000 REMARK 3 B33 (A**2) : -3.22000 REMARK 3 B12 (A**2) : 1.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.369 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.246 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3465 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4660 ; 2.001 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 438 ; 8.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;36.123 ;25.177 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 669 ;23.523 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.809 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 547 ; 0.136 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2484 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3T9Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93930 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL REMARK 200 OPTICS : TOROIDAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19173 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.760 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 16.80 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 64.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : 16.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3T91 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9 - 1.2 M SODIUM ACETATE AND 0.1 M REMARK 280 HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.49033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 214.98067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 161.23550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 268.72583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.74517 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 107.49033 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 214.98067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 268.72583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 161.23550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 53.74517 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -125.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 43.00700 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 74.49031 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -53.74517 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 43.00700 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 74.49031 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -53.74517 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 586 REMARK 465 PRO A 587 REMARK 465 MET A 630 REMARK 465 GLY A 631 REMARK 465 ASN A 632 REMARK 465 ASN A 717 REMARK 465 LEU A 718 REMARK 465 PRO A 719 REMARK 465 ILE A 720 REMARK 465 GLY A 721 REMARK 465 ALA A 812 REMARK 465 SER A 813 REMARK 465 ILE A 814 REMARK 465 PRO A 815 REMARK 465 VAL A 816 REMARK 465 PRO A 817 REMARK 465 ALA A 818 REMARK 465 ILE A 819 REMARK 465 PHE A 820 REMARK 465 GLN A 821 REMARK 465 ASN A 822 REMARK 465 LYS A 823 REMARK 465 GLN A 824 REMARK 465 GLU A 825 REMARK 465 ILE A 826 REMARK 465 SER A 827 REMARK 465 GLY B 586 REMARK 465 PRO B 587 REMARK 465 ALA B 588 REMARK 465 MET B 630 REMARK 465 GLY B 631 REMARK 465 ASN B 632 REMARK 465 GLY B 633 REMARK 465 PHE B 820 REMARK 465 GLN B 821 REMARK 465 ASN B 822 REMARK 465 LYS B 823 REMARK 465 GLN B 824 REMARK 465 GLU B 825 REMARK 465 ILE B 826 REMARK 465 SER B 827 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 606 -72.25 -56.23 REMARK 500 ALA A 619 -25.31 63.11 REMARK 500 ALA A 634 -97.33 43.19 REMARK 500 ARG A 635 109.25 -59.97 REMARK 500 GLU A 642 -103.50 -47.03 REMARK 500 THR A 643 -69.78 -10.44 REMARK 500 GLU A 652 -7.55 -59.09 REMARK 500 ILE A 655 169.42 -47.81 REMARK 500 LEU A 670 36.41 -80.67 REMARK 500 THR A 673 -54.53 -25.95 REMARK 500 GLU A 675 -56.29 -144.19 REMARK 500 TYR A 677 50.70 -101.18 REMARK 500 SER A 678 -147.99 28.70 REMARK 500 ASN A 724 74.56 -151.70 REMARK 500 ASP A 727 61.70 68.11 REMARK 500 HIS A 754 68.78 37.47 REMARK 500 LYS A 770 55.67 -113.02 REMARK 500 THR A 771 149.99 -171.07 REMARK 500 SER A 790 61.52 -108.82 REMARK 500 HIS A 806 40.19 -102.39 REMARK 500 LYS A 810 90.55 -67.30 REMARK 500 SER B 590 140.01 69.30 REMARK 500 LYS B 602 151.35 -44.33 REMARK 500 LEU B 606 -126.05 98.24 REMARK 500 ALA B 619 0.00 52.41 REMARK 500 ASN B 641 -82.24 -1.40 REMARK 500 GLU B 642 -64.08 139.24 REMARK 500 LEU B 651 -21.36 -36.62 REMARK 500 GLU B 652 -84.62 -91.89 REMARK 500 SER B 653 140.01 -37.23 REMARK 500 ILE B 655 122.06 13.38 REMARK 500 THR B 673 95.04 -51.66 REMARK 500 VAL B 710 54.76 -109.85 REMARK 500 LEU B 718 99.15 -65.73 REMARK 500 ASN B 724 74.38 -106.63 REMARK 500 ILE B 748 -31.72 -133.34 REMARK 500 PRO B 752 97.53 -26.63 REMARK 500 HIS B 754 90.34 -66.12 REMARK 500 VAL B 755 -144.98 -67.75 REMARK 500 GLU B 756 95.99 72.38 REMARK 500 ASN B 757 78.43 55.59 REMARK 500 ASP B 759 -70.37 -41.71 REMARK 500 LYS B 763 -19.49 -49.09 REMARK 500 LEU B 780 -76.41 -63.13 REMARK 500 GLU B 784 -2.39 -53.81 REMARK 500 THR B 788 -7.17 -54.77 REMARK 500 ARG B 789 28.49 -145.78 REMARK 500 SER B 790 -138.11 53.56 REMARK 500 GLN B 792 114.32 24.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 1 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 14 O REMARK 620 2 HOH A 16 O 169.1 REMARK 620 3 ASP A 746 OD1 97.3 72.2 REMARK 620 4 ASP A 795 OD2 94.9 81.3 83.4 REMARK 620 5 HOH B 37 O 109.6 80.2 150.6 82.6 REMARK 620 6 ASP B 628 OD2 106.2 77.7 92.4 158.9 91.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 3 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 35 O REMARK 620 2 ASP A 628 OD1 82.7 REMARK 620 3 HOH B 19 O 119.8 87.2 REMARK 620 4 ASP B 746 OD1 156.8 74.1 59.8 REMARK 620 5 ASP B 746 OD2 118.7 73.0 114.3 54.6 REMARK 620 6 ASP B 795 OD2 125.1 149.8 87.8 77.6 82.1 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3T91 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT MN PRESOAKING DBREF 3T9Q A 590 827 UNP P37475 SP2E_BACSU 590 827 DBREF 3T9Q B 590 827 UNP P37475 SP2E_BACSU 590 827 SEQADV 3T9Q GLY A 586 UNP P37475 EXPRESSION TAG SEQADV 3T9Q PRO A 587 UNP P37475 EXPRESSION TAG SEQADV 3T9Q ALA A 588 UNP P37475 EXPRESSION TAG SEQADV 3T9Q MET A 589 UNP P37475 EXPRESSION TAG SEQADV 3T9Q GLY B 586 UNP P37475 EXPRESSION TAG SEQADV 3T9Q PRO B 587 UNP P37475 EXPRESSION TAG SEQADV 3T9Q ALA B 588 UNP P37475 EXPRESSION TAG SEQADV 3T9Q MET B 589 UNP P37475 EXPRESSION TAG SEQRES 1 A 242 GLY PRO ALA MET SER TYR ARG VAL SER THR GLY ALA ALA SEQRES 2 A 242 HIS ALA ALA LYS GLY GLY GLY LEU VAL SER GLY ASP SER SEQRES 3 A 242 TYR SER MET MET GLU LEU GLY ALA ARG LYS TYR ALA ALA SEQRES 4 A 242 ALA ILE SER ASP GLY MET GLY ASN GLY ALA ARG ALA HIS SEQRES 5 A 242 PHE GLU SER ASN GLU THR ILE LYS LEU LEU GLU LYS ILE SEQRES 6 A 242 LEU GLU SER GLY ILE ASP GLU LYS ILE ALA ILE LYS THR SEQRES 7 A 242 ILE ASN SER ILE LEU SER LEU ARG THR THR ASP GLU ILE SEQRES 8 A 242 TYR SER THR LEU ASP LEU SER ILE ILE ASP LEU GLN ASP SEQRES 9 A 242 ALA SER CYS LYS PHE LEU LYS VAL GLY SER THR PRO SER SEQRES 10 A 242 PHE ILE LYS ARG GLY ASP GLN VAL MET LYS VAL GLN ALA SEQRES 11 A 242 SER ASN LEU PRO ILE GLY ILE ILE ASN GLU PHE ASP VAL SEQRES 12 A 242 GLU VAL VAL SER GLU GLN LEU LYS ALA GLY ASP LEU LEU SEQRES 13 A 242 ILE MET MET SER ASP GLY ILE PHE GLU GLY PRO LYS HIS SEQRES 14 A 242 VAL GLU ASN HIS ASP LEU TRP MET LYS ARG LYS MET LYS SEQRES 15 A 242 GLY LEU LYS THR ASN ASP PRO GLN GLU ILE ALA ASP LEU SEQRES 16 A 242 LEU MET GLU GLU VAL ILE ARG THR ARG SER GLY GLN ILE SEQRES 17 A 242 GLU ASP ASP MET THR VAL VAL VAL VAL ARG ILE ASP HIS SEQRES 18 A 242 ASN THR PRO LYS TRP ALA SER ILE PRO VAL PRO ALA ILE SEQRES 19 A 242 PHE GLN ASN LYS GLN GLU ILE SER SEQRES 1 B 242 GLY PRO ALA MET SER TYR ARG VAL SER THR GLY ALA ALA SEQRES 2 B 242 HIS ALA ALA LYS GLY GLY GLY LEU VAL SER GLY ASP SER SEQRES 3 B 242 TYR SER MET MET GLU LEU GLY ALA ARG LYS TYR ALA ALA SEQRES 4 B 242 ALA ILE SER ASP GLY MET GLY ASN GLY ALA ARG ALA HIS SEQRES 5 B 242 PHE GLU SER ASN GLU THR ILE LYS LEU LEU GLU LYS ILE SEQRES 6 B 242 LEU GLU SER GLY ILE ASP GLU LYS ILE ALA ILE LYS THR SEQRES 7 B 242 ILE ASN SER ILE LEU SER LEU ARG THR THR ASP GLU ILE SEQRES 8 B 242 TYR SER THR LEU ASP LEU SER ILE ILE ASP LEU GLN ASP SEQRES 9 B 242 ALA SER CYS LYS PHE LEU LYS VAL GLY SER THR PRO SER SEQRES 10 B 242 PHE ILE LYS ARG GLY ASP GLN VAL MET LYS VAL GLN ALA SEQRES 11 B 242 SER ASN LEU PRO ILE GLY ILE ILE ASN GLU PHE ASP VAL SEQRES 12 B 242 GLU VAL VAL SER GLU GLN LEU LYS ALA GLY ASP LEU LEU SEQRES 13 B 242 ILE MET MET SER ASP GLY ILE PHE GLU GLY PRO LYS HIS SEQRES 14 B 242 VAL GLU ASN HIS ASP LEU TRP MET LYS ARG LYS MET LYS SEQRES 15 B 242 GLY LEU LYS THR ASN ASP PRO GLN GLU ILE ALA ASP LEU SEQRES 16 B 242 LEU MET GLU GLU VAL ILE ARG THR ARG SER GLY GLN ILE SEQRES 17 B 242 GLU ASP ASP MET THR VAL VAL VAL VAL ARG ILE ASP HIS SEQRES 18 B 242 ASN THR PRO LYS TRP ALA SER ILE PRO VAL PRO ALA ILE SEQRES 19 B 242 PHE GLN ASN LYS GLN GLU ILE SER HET MN A 1 1 HET GL0 A 5 12 HET MN B 3 1 HETNAM MN MANGANESE (II) ION HETNAM GL0 BETA-D-GULOPYRANOSE HETSYN GL0 BETA-D-GULOSE; D-GULOSE; GULOSE FORMUL 3 MN 2(MN 2+) FORMUL 4 GL0 C6 H12 O6 FORMUL 6 HOH *35(H2 O) HELIX 1 1 ASN A 641 GLU A 652 1 12 HELIX 2 2 ASP A 656 LEU A 670 1 15 HELIX 3 3 SER A 745 GLU A 750 1 6 HELIX 4 4 ASN A 757 GLY A 768 1 12 HELIX 5 5 ASP A 773 ARG A 789 1 17 HELIX 6 6 ALA B 601 GLY B 605 5 5 HELIX 7 7 GLU B 642 SER B 653 1 12 HELIX 8 8 ASP B 656 SER B 669 1 14 HELIX 9 9 SER B 745 GLU B 750 1 6 HELIX 10 10 ASN B 757 GLY B 768 1 12 HELIX 11 11 ASP B 773 ARG B 787 1 15 HELIX 12 12 THR B 788 SER B 790 5 3 HELIX 13 13 PRO B 809 ILE B 814 1 6 SHEET 1 A 4 ARG A 592 ALA A 600 0 SHEET 2 A 4 MET B 797 ASP B 805 -1 O MET B 797 N ALA A 600 SHEET 3 A 4 LEU B 740 MET B 744 -1 N MET B 743 O VAL B 800 SHEET 4 A 4 PHE B 703 LYS B 705 -1 N PHE B 703 O ILE B 742 SHEET 1 B10 VAL A 728 GLN A 734 0 SHEET 2 B10 SER A 691 VAL A 697 -1 N LYS A 696 O GLU A 729 SHEET 3 B10 THR A 679 ASP A 686 -1 N LEU A 682 O LEU A 695 SHEET 4 B10 LYS B 621 ASP B 628 -1 O TYR B 622 N ILE A 685 SHEET 5 B10 ASP B 610 LEU B 617 -1 N SER B 611 O SER B 627 SHEET 6 B10 ASP A 610 LEU A 617 -1 N GLU A 616 O MET B 614 SHEET 7 B10 LYS A 621 ASP A 628 -1 O LYS A 621 N LEU A 617 SHEET 8 B10 THR B 679 ASP B 686 -1 O ILE B 685 N TYR A 622 SHEET 9 B10 SER B 691 VAL B 697 -1 O SER B 691 N ASP B 686 SHEET 10 B10 VAL B 728 GLN B 734 -1 O VAL B 731 N PHE B 694 SHEET 1 C 2 PHE A 638 SER A 640 0 SHEET 2 C 2 PHE B 638 SER B 640 -1 O GLU B 639 N GLU A 639 SHEET 1 D 5 MET A 711 LYS A 712 0 SHEET 2 D 5 PHE A 703 ILE A 704 -1 N ILE A 704 O MET A 711 SHEET 3 D 5 LEU A 740 MET A 744 -1 O ILE A 742 N PHE A 703 SHEET 4 D 5 MET A 797 ASP A 805 -1 O VAL A 802 N LEU A 741 SHEET 5 D 5 ARG B 592 ALA B 600 -1 O ALA B 600 N MET A 797 LINK MN MN A 1 O HOH A 14 1555 1555 2.45 LINK MN MN A 1 O HOH A 16 1555 1555 2.19 LINK MN MN A 1 OD1 ASP A 746 1555 1555 2.33 LINK MN MN A 1 OD2 ASP A 795 1555 1555 2.49 LINK MN MN A 1 O HOH B 37 1555 1555 2.37 LINK MN MN A 1 OD2 ASP B 628 1555 1555 2.52 LINK O HOH A 35 MN MN B 3 1555 1555 2.75 LINK OD1 ASP A 628 MN MN B 3 1555 1555 2.51 LINK MN MN B 3 O HOH B 19 1555 1555 2.48 LINK MN MN B 3 OD1 ASP B 746 1555 1555 2.19 LINK MN MN B 3 OD2 ASP B 746 1555 1555 2.48 LINK MN MN B 3 OD2 ASP B 795 1555 1555 2.31 CISPEP 1 GLY A 604 GLY A 605 0 8.86 CISPEP 2 GLU A 675 ILE A 676 0 -0.03 CISPEP 3 ILE A 676 TYR A 677 0 0.03 CISPEP 4 THR B 673 ASP B 674 0 -0.04 CRYST1 86.014 86.014 322.471 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011626 0.006712 0.000000 0.00000 SCALE2 0.000000 0.013425 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003101 0.00000