data_3TB7 # _entry.id 3TB7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3TB7 pdb_00003tb7 10.2210/pdb3tb7/pdb RCSB RCSB067265 ? ? WWPDB D_1000067265 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-26 2 'Structure model' 1 1 2011-11-09 3 'Structure model' 1 2 2011-12-21 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 4 'Structure model' '_software.version' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3TB7 _pdbx_database_status.recvd_initial_deposition_date 2011-08-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RBK 'The type II crystal structure of Streptococcus agalactiae sortase C1' unspecified PDB 3RBI 'The type III crystal structure of Streptococcus agalactiae sortase C1' unspecified PDB 3RBJ 'Crystal structure of the Streptococcus agalactiae lid mutant of sortase C1' unspecified PDB 3TBE 'The crystal structure of the complex of Streptococcus agalactiae sortase C1 and MTSET' unspecified # _audit_author.name 'Khare, B.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;The Crystal Structure Analysis of Group B Streptococcus Sortase C1: A Model for the "Lid" Movement upon Substrate Binding. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 414 _citation.page_first 563 _citation.page_last 577 _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22033482 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.10.017 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Khare, B.' 1 ? primary 'Fu, Z.Q.' 2 ? primary 'Huang, I.H.' 3 ? primary 'Ton-That, H.' 4 ? primary 'Narayana, S.V.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sortase family protein' 25775.227 1 3.4.22.- ? 'UNP residues 43-260' ? 2 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Sortase C1, Pilus-specific sortase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHGSSHANINAFKEAVTKIDRVEINRRLELAYAYNASIAGAKTNGEYPALKDPYSAEQKQAGVVEYARMLEV KEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIG GKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKTVQKDSKTFRQQQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHGSSHANINAFKEAVTKIDRVEINRRLELAYAYNASIAGAKTNGEYPALKDPYSAEQKQAGVVEYARMLEV KEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIG GKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKTVQKDSKTFRQQQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 SER n 1 13 SER n 1 14 HIS n 1 15 ALA n 1 16 ASN n 1 17 ILE n 1 18 ASN n 1 19 ALA n 1 20 PHE n 1 21 LYS n 1 22 GLU n 1 23 ALA n 1 24 VAL n 1 25 THR n 1 26 LYS n 1 27 ILE n 1 28 ASP n 1 29 ARG n 1 30 VAL n 1 31 GLU n 1 32 ILE n 1 33 ASN n 1 34 ARG n 1 35 ARG n 1 36 LEU n 1 37 GLU n 1 38 LEU n 1 39 ALA n 1 40 TYR n 1 41 ALA n 1 42 TYR n 1 43 ASN n 1 44 ALA n 1 45 SER n 1 46 ILE n 1 47 ALA n 1 48 GLY n 1 49 ALA n 1 50 LYS n 1 51 THR n 1 52 ASN n 1 53 GLY n 1 54 GLU n 1 55 TYR n 1 56 PRO n 1 57 ALA n 1 58 LEU n 1 59 LYS n 1 60 ASP n 1 61 PRO n 1 62 TYR n 1 63 SER n 1 64 ALA n 1 65 GLU n 1 66 GLN n 1 67 LYS n 1 68 GLN n 1 69 ALA n 1 70 GLY n 1 71 VAL n 1 72 VAL n 1 73 GLU n 1 74 TYR n 1 75 ALA n 1 76 ARG n 1 77 MET n 1 78 LEU n 1 79 GLU n 1 80 VAL n 1 81 LYS n 1 82 GLU n 1 83 GLN n 1 84 ILE n 1 85 GLY n 1 86 HIS n 1 87 VAL n 1 88 ILE n 1 89 ILE n 1 90 PRO n 1 91 ARG n 1 92 ILE n 1 93 ASN n 1 94 GLN n 1 95 ASP n 1 96 ILE n 1 97 PRO n 1 98 ILE n 1 99 TYR n 1 100 ALA n 1 101 GLY n 1 102 SER n 1 103 ALA n 1 104 GLU n 1 105 GLU n 1 106 ASN n 1 107 LEU n 1 108 GLN n 1 109 ARG n 1 110 GLY n 1 111 VAL n 1 112 GLY n 1 113 HIS n 1 114 LEU n 1 115 GLU n 1 116 GLY n 1 117 THR n 1 118 SER n 1 119 LEU n 1 120 PRO n 1 121 VAL n 1 122 GLY n 1 123 GLY n 1 124 GLU n 1 125 SER n 1 126 THR n 1 127 HIS n 1 128 ALA n 1 129 VAL n 1 130 LEU n 1 131 THR n 1 132 ALA n 1 133 HIS n 1 134 ARG n 1 135 GLY n 1 136 LEU n 1 137 PRO n 1 138 THR n 1 139 ALA n 1 140 LYS n 1 141 LEU n 1 142 PHE n 1 143 THR n 1 144 ASN n 1 145 LEU n 1 146 ASP n 1 147 LYS n 1 148 VAL n 1 149 THR n 1 150 VAL n 1 151 GLY n 1 152 ASP n 1 153 ARG n 1 154 PHE n 1 155 TYR n 1 156 ILE n 1 157 GLU n 1 158 HIS n 1 159 ILE n 1 160 GLY n 1 161 GLY n 1 162 LYS n 1 163 ILE n 1 164 ALA n 1 165 TYR n 1 166 GLN n 1 167 VAL n 1 168 ASP n 1 169 GLN n 1 170 ILE n 1 171 LYS n 1 172 VAL n 1 173 ILE n 1 174 ALA n 1 175 PRO n 1 176 ASP n 1 177 GLN n 1 178 LEU n 1 179 GLU n 1 180 ASP n 1 181 LEU n 1 182 TYR n 1 183 VAL n 1 184 ILE n 1 185 GLN n 1 186 GLY n 1 187 GLU n 1 188 ASP n 1 189 HIS n 1 190 VAL n 1 191 THR n 1 192 LEU n 1 193 LEU n 1 194 THR n 1 195 CYS n 1 196 THR n 1 197 PRO n 1 198 TYR n 1 199 MET n 1 200 ILE n 1 201 ASN n 1 202 SER n 1 203 HIS n 1 204 ARG n 1 205 LEU n 1 206 LEU n 1 207 VAL n 1 208 ARG n 1 209 GLY n 1 210 LYS n 1 211 ARG n 1 212 ILE n 1 213 PRO n 1 214 TYR n 1 215 VAL n 1 216 GLU n 1 217 LYS n 1 218 THR n 1 219 VAL n 1 220 GLN n 1 221 LYS n 1 222 ASP n 1 223 SER n 1 224 LYS n 1 225 THR n 1 226 PHE n 1 227 ARG n 1 228 GLN n 1 229 GLN n 1 230 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SAG0647 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'SAG 2603V/R' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae serogroup V' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 216466 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain XL1Blue _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -10 ? ? ? A . n A 1 2 ARG 2 -9 ? ? ? A . n A 1 3 GLY 3 -8 ? ? ? A . n A 1 4 SER 4 -7 ? ? ? A . n A 1 5 HIS 5 -6 ? ? ? A . n A 1 6 HIS 6 -5 ? ? ? A . n A 1 7 HIS 7 -4 ? ? ? A . n A 1 8 HIS 8 -3 ? ? ? A . n A 1 9 HIS 9 -2 ? ? ? A . n A 1 10 HIS 10 -1 ? ? ? A . n A 1 11 GLY 11 0 ? ? ? A . n A 1 12 SER 12 1 ? ? ? A . n A 1 13 SER 13 2 ? ? ? A . n A 1 14 HIS 14 3 ? ? ? A . n A 1 15 ALA 15 4 ? ? ? A . n A 1 16 ASN 16 5 5 ASN ASN A . n A 1 17 ILE 17 6 6 ILE ALA A . n A 1 18 ASN 18 7 7 ASN ASN A . n A 1 19 ALA 19 8 8 ALA ALA A . n A 1 20 PHE 20 9 9 PHE PHE A . n A 1 21 LYS 21 10 10 LYS ALA A . n A 1 22 GLU 22 11 11 GLU ALA A . n A 1 23 ALA 23 12 12 ALA ALA A . n A 1 24 VAL 24 13 13 VAL VAL A . n A 1 25 THR 25 14 14 THR THR A . n A 1 26 LYS 26 15 15 LYS ALA A . n A 1 27 ILE 27 16 16 ILE ILE A . n A 1 28 ASP 28 17 17 ASP ASP A . n A 1 29 ARG 29 18 18 ARG ARG A . n A 1 30 VAL 30 19 19 VAL VAL A . n A 1 31 GLU 31 20 20 GLU GLU A . n A 1 32 ILE 32 21 21 ILE ILE A . n A 1 33 ASN 33 22 22 ASN ASN A . n A 1 34 ARG 34 23 23 ARG ARG A . n A 1 35 ARG 35 24 24 ARG ARG A . n A 1 36 LEU 36 25 25 LEU LEU A . n A 1 37 GLU 37 26 26 GLU GLU A . n A 1 38 LEU 38 27 27 LEU LEU A . n A 1 39 ALA 39 28 28 ALA ALA A . n A 1 40 TYR 40 29 29 TYR TYR A . n A 1 41 ALA 41 30 30 ALA ALA A . n A 1 42 TYR 42 31 31 TYR TYR A . n A 1 43 ASN 43 32 32 ASN ASN A . n A 1 44 ALA 44 33 33 ALA ALA A . n A 1 45 SER 45 34 34 SER SER A . n A 1 46 ILE 46 35 35 ILE ILE A . n A 1 47 ALA 47 36 36 ALA ALA A . n A 1 48 GLY 48 37 37 GLY GLY A . n A 1 49 ALA 49 38 ? ? ? A . n A 1 50 LYS 50 39 ? ? ? A . n A 1 51 THR 51 40 ? ? ? A . n A 1 52 ASN 52 41 ? ? ? A . n A 1 53 GLY 53 42 ? ? ? A . n A 1 54 GLU 54 43 ? ? ? A . n A 1 55 TYR 55 44 ? ? ? A . n A 1 56 PRO 56 45 ? ? ? A . n A 1 57 ALA 57 46 ? ? ? A . n A 1 58 LEU 58 47 ? ? ? A . n A 1 59 LYS 59 48 ? ? ? A . n A 1 60 ASP 60 49 ? ? ? A . n A 1 61 PRO 61 50 50 PRO PRO A . n A 1 62 TYR 62 51 51 TYR TYR A . n A 1 63 SER 63 52 52 SER SER A . n A 1 64 ALA 64 53 53 ALA ALA A . n A 1 65 GLU 65 54 54 GLU GLU A . n A 1 66 GLN 66 55 55 GLN GLN A . n A 1 67 LYS 67 56 56 LYS LYS A . n A 1 68 GLN 68 57 57 GLN GLN A . n A 1 69 ALA 69 58 58 ALA ALA A . n A 1 70 GLY 70 59 59 GLY GLY A . n A 1 71 VAL 71 60 60 VAL VAL A . n A 1 72 VAL 72 61 61 VAL VAL A . n A 1 73 GLU 73 62 62 GLU GLU A . n A 1 74 TYR 74 63 63 TYR TYR A . n A 1 75 ALA 75 64 64 ALA ALA A . n A 1 76 ARG 76 65 65 ARG ARG A . n A 1 77 MET 77 66 66 MET MET A . n A 1 78 LEU 78 67 67 LEU LEU A . n A 1 79 GLU 79 68 68 GLU ALA A . n A 1 80 VAL 80 69 69 VAL VAL A . n A 1 81 LYS 81 70 70 LYS LYS A . n A 1 82 GLU 82 71 71 GLU GLU A . n A 1 83 GLN 83 72 72 GLN GLN A . n A 1 84 ILE 84 73 73 ILE ILE A . n A 1 85 GLY 85 74 74 GLY GLY A . n A 1 86 HIS 86 75 75 HIS HIS A . n A 1 87 VAL 87 76 76 VAL VAL A . n A 1 88 ILE 88 77 77 ILE ILE A . n A 1 89 ILE 89 78 78 ILE ILE A . n A 1 90 PRO 90 79 79 PRO PRO A . n A 1 91 ARG 91 80 80 ARG ARG A . n A 1 92 ILE 92 81 81 ILE ILE A . n A 1 93 ASN 93 82 82 ASN ASN A . n A 1 94 GLN 94 83 83 GLN GLN A . n A 1 95 ASP 95 84 84 ASP ASP A . n A 1 96 ILE 96 85 85 ILE ILE A . n A 1 97 PRO 97 86 86 PRO PRO A . n A 1 98 ILE 98 87 87 ILE ILE A . n A 1 99 TYR 99 88 88 TYR TYR A . n A 1 100 ALA 100 89 89 ALA ALA A . n A 1 101 GLY 101 90 90 GLY GLY A . n A 1 102 SER 102 91 91 SER SER A . n A 1 103 ALA 103 92 92 ALA ALA A . n A 1 104 GLU 104 93 93 GLU GLU A . n A 1 105 GLU 105 94 94 GLU ALA A . n A 1 106 ASN 106 95 95 ASN ASN A . n A 1 107 LEU 107 96 96 LEU LEU A . n A 1 108 GLN 108 97 97 GLN GLN A . n A 1 109 ARG 109 98 98 ARG ARG A . n A 1 110 GLY 110 99 99 GLY GLY A . n A 1 111 VAL 111 100 100 VAL VAL A . n A 1 112 GLY 112 101 101 GLY GLY A . n A 1 113 HIS 113 102 102 HIS HIS A . n A 1 114 LEU 114 103 103 LEU LEU A . n A 1 115 GLU 115 104 104 GLU GLU A . n A 1 116 GLY 116 105 105 GLY GLY A . n A 1 117 THR 117 106 106 THR THR A . n A 1 118 SER 118 107 107 SER SER A . n A 1 119 LEU 119 108 108 LEU LEU A . n A 1 120 PRO 120 109 109 PRO PRO A . n A 1 121 VAL 121 110 110 VAL VAL A . n A 1 122 GLY 122 111 111 GLY GLY A . n A 1 123 GLY 123 112 112 GLY GLY A . n A 1 124 GLU 124 113 113 GLU ALA A . n A 1 125 SER 125 114 114 SER SER A . n A 1 126 THR 126 115 115 THR THR A . n A 1 127 HIS 127 116 116 HIS HIS A . n A 1 128 ALA 128 117 117 ALA ALA A . n A 1 129 VAL 129 118 118 VAL VAL A . n A 1 130 LEU 130 119 119 LEU LEU A . n A 1 131 THR 131 120 120 THR THR A . n A 1 132 ALA 132 121 121 ALA ALA A . n A 1 133 HIS 133 122 122 HIS HIS A . n A 1 134 ARG 134 123 123 ARG ARG A . n A 1 135 GLY 135 124 124 GLY GLY A . n A 1 136 LEU 136 125 125 LEU LEU A . n A 1 137 PRO 137 126 126 PRO PRO A . n A 1 138 THR 138 127 127 THR THR A . n A 1 139 ALA 139 128 128 ALA ALA A . n A 1 140 LYS 140 129 129 LYS LYS A . n A 1 141 LEU 141 130 130 LEU LEU A . n A 1 142 PHE 142 131 131 PHE PHE A . n A 1 143 THR 143 132 132 THR THR A . n A 1 144 ASN 144 133 133 ASN ASN A . n A 1 145 LEU 145 134 134 LEU LEU A . n A 1 146 ASP 146 135 135 ASP ASP A . n A 1 147 LYS 147 136 136 LYS LYS A . n A 1 148 VAL 148 137 137 VAL VAL A . n A 1 149 THR 149 138 138 THR THR A . n A 1 150 VAL 150 139 139 VAL VAL A . n A 1 151 GLY 151 140 140 GLY GLY A . n A 1 152 ASP 152 141 141 ASP ASP A . n A 1 153 ARG 153 142 142 ARG ARG A . n A 1 154 PHE 154 143 143 PHE PHE A . n A 1 155 TYR 155 144 144 TYR TYR A . n A 1 156 ILE 156 145 145 ILE ILE A . n A 1 157 GLU 157 146 146 GLU GLU A . n A 1 158 HIS 158 147 147 HIS HIS A . n A 1 159 ILE 159 148 148 ILE ILE A . n A 1 160 GLY 160 149 149 GLY GLY A . n A 1 161 GLY 161 150 150 GLY GLY A . n A 1 162 LYS 162 151 151 LYS LYS A . n A 1 163 ILE 163 152 152 ILE ILE A . n A 1 164 ALA 164 153 153 ALA ALA A . n A 1 165 TYR 165 154 154 TYR TYR A . n A 1 166 GLN 166 155 155 GLN GLN A . n A 1 167 VAL 167 156 156 VAL VAL A . n A 1 168 ASP 168 157 157 ASP ASP A . n A 1 169 GLN 169 158 158 GLN GLN A . n A 1 170 ILE 170 159 159 ILE ILE A . n A 1 171 LYS 171 160 160 LYS LYS A . n A 1 172 VAL 172 161 161 VAL VAL A . n A 1 173 ILE 173 162 162 ILE ILE A . n A 1 174 ALA 174 163 163 ALA ALA A . n A 1 175 PRO 175 164 164 PRO PRO A . n A 1 176 ASP 176 165 165 ASP ASP A . n A 1 177 GLN 177 166 166 GLN GLN A . n A 1 178 LEU 178 167 167 LEU LEU A . n A 1 179 GLU 179 168 168 GLU GLU A . n A 1 180 ASP 180 169 169 ASP ASP A . n A 1 181 LEU 181 170 170 LEU LEU A . n A 1 182 TYR 182 171 171 TYR TYR A . n A 1 183 VAL 183 172 172 VAL VAL A . n A 1 184 ILE 184 173 173 ILE ILE A . n A 1 185 GLN 185 174 174 GLN GLN A . n A 1 186 GLY 186 175 175 GLY GLY A . n A 1 187 GLU 187 176 176 GLU GLU A . n A 1 188 ASP 188 177 177 ASP ASP A . n A 1 189 HIS 189 178 178 HIS HIS A . n A 1 190 VAL 190 179 179 VAL VAL A . n A 1 191 THR 191 180 180 THR THR A . n A 1 192 LEU 192 181 181 LEU LEU A . n A 1 193 LEU 193 182 182 LEU LEU A . n A 1 194 THR 194 183 183 THR THR A . n A 1 195 CYS 195 184 184 CYS CYS A . n A 1 196 THR 196 185 185 THR THR A . n A 1 197 PRO 197 186 186 PRO PRO A . n A 1 198 TYR 198 187 187 TYR TYR A . n A 1 199 MET 199 188 188 MET MET A . n A 1 200 ILE 200 189 189 ILE ILE A . n A 1 201 ASN 201 190 190 ASN ASN A . n A 1 202 SER 202 191 191 SER SER A . n A 1 203 HIS 203 192 192 HIS HIS A . n A 1 204 ARG 204 193 193 ARG ARG A . n A 1 205 LEU 205 194 194 LEU LEU A . n A 1 206 LEU 206 195 195 LEU LEU A . n A 1 207 VAL 207 196 196 VAL VAL A . n A 1 208 ARG 208 197 197 ARG ARG A . n A 1 209 GLY 209 198 198 GLY GLY A . n A 1 210 LYS 210 199 199 LYS LYS A . n A 1 211 ARG 211 200 200 ARG ARG A . n A 1 212 ILE 212 201 201 ILE ILE A . n A 1 213 PRO 213 202 202 PRO PRO A . n A 1 214 TYR 214 203 203 TYR TYR A . n A 1 215 VAL 215 204 204 VAL VAL A . n A 1 216 GLU 216 205 ? ? ? A . n A 1 217 LYS 217 206 ? ? ? A . n A 1 218 THR 218 207 ? ? ? A . n A 1 219 VAL 219 208 ? ? ? A . n A 1 220 GLN 220 209 ? ? ? A . n A 1 221 LYS 221 210 ? ? ? A . n A 1 222 ASP 222 211 ? ? ? A . n A 1 223 SER 223 212 ? ? ? A . n A 1 224 LYS 224 213 ? ? ? A . n A 1 225 THR 225 214 ? ? ? A . n A 1 226 PHE 226 215 ? ? ? A . n A 1 227 ARG 227 216 ? ? ? A . n A 1 228 GLN 228 217 ? ? ? A . n A 1 229 GLN 229 218 ? ? ? A . n A 1 230 GLN 230 219 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 220 1 HOH HOH A . B 2 HOH 2 221 3 HOH HOH A . B 2 HOH 3 222 4 HOH HOH A . B 2 HOH 4 223 7 HOH HOH A . B 2 HOH 5 224 10 HOH HOH A . B 2 HOH 6 225 11 HOH HOH A . B 2 HOH 7 226 12 HOH HOH A . B 2 HOH 8 227 13 HOH HOH A . B 2 HOH 9 228 14 HOH HOH A . B 2 HOH 10 229 15 HOH HOH A . B 2 HOH 11 230 20 HOH HOH A . B 2 HOH 12 231 22 HOH HOH A . B 2 HOH 13 232 23 HOH HOH A . B 2 HOH 14 233 24 HOH HOH A . B 2 HOH 15 234 25 HOH HOH A . B 2 HOH 16 235 26 HOH HOH A . B 2 HOH 17 236 27 HOH HOH A . B 2 HOH 18 237 28 HOH HOH A . B 2 HOH 19 238 29 HOH HOH A . B 2 HOH 20 239 30 HOH HOH A . B 2 HOH 21 240 31 HOH HOH A . B 2 HOH 22 241 32 HOH HOH A . B 2 HOH 23 242 33 HOH HOH A . B 2 HOH 24 243 34 HOH HOH A . B 2 HOH 25 244 35 HOH HOH A . B 2 HOH 26 245 36 HOH HOH A . B 2 HOH 27 246 37 HOH HOH A . B 2 HOH 28 247 38 HOH HOH A . B 2 HOH 29 248 39 HOH HOH A . B 2 HOH 30 249 40 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 6 ? CG1 ? A ILE 17 CG1 2 1 Y 1 A ILE 6 ? CG2 ? A ILE 17 CG2 3 1 Y 1 A ILE 6 ? CD1 ? A ILE 17 CD1 4 1 Y 1 A LYS 10 ? CG ? A LYS 21 CG 5 1 Y 1 A LYS 10 ? CD ? A LYS 21 CD 6 1 Y 1 A LYS 10 ? CE ? A LYS 21 CE 7 1 Y 1 A LYS 10 ? NZ ? A LYS 21 NZ 8 1 Y 1 A GLU 11 ? CG ? A GLU 22 CG 9 1 Y 1 A GLU 11 ? CD ? A GLU 22 CD 10 1 Y 1 A GLU 11 ? OE1 ? A GLU 22 OE1 11 1 Y 1 A GLU 11 ? OE2 ? A GLU 22 OE2 12 1 Y 1 A LYS 15 ? CG ? A LYS 26 CG 13 1 Y 1 A LYS 15 ? CD ? A LYS 26 CD 14 1 Y 1 A LYS 15 ? CE ? A LYS 26 CE 15 1 Y 1 A LYS 15 ? NZ ? A LYS 26 NZ 16 1 Y 1 A GLU 68 ? CG ? A GLU 79 CG 17 1 Y 1 A GLU 68 ? CD ? A GLU 79 CD 18 1 Y 1 A GLU 68 ? OE1 ? A GLU 79 OE1 19 1 Y 1 A GLU 68 ? OE2 ? A GLU 79 OE2 20 1 Y 1 A GLU 94 ? CG ? A GLU 105 CG 21 1 Y 1 A GLU 94 ? CD ? A GLU 105 CD 22 1 Y 1 A GLU 94 ? OE1 ? A GLU 105 OE1 23 1 Y 1 A GLU 94 ? OE2 ? A GLU 105 OE2 24 1 Y 1 A GLU 113 ? CG ? A GLU 124 CG 25 1 Y 1 A GLU 113 ? CD ? A GLU 124 CD 26 1 Y 1 A GLU 113 ? OE1 ? A GLU 124 OE1 27 1 Y 1 A GLU 113 ? OE2 ? A GLU 124 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0102 ? 1 SGXPRO 'model building' . ? 2 SOLVE phasing . ? 3 CNS refinement . ? 4 HKL-2000 'data collection' . ? 5 HKL-2000 'data reduction' . ? 6 HKL-2000 'data scaling' . ? 7 SGXPRO phasing . ? 8 # _cell.entry_id 3TB7 _cell.length_a 78.590 _cell.length_b 46.930 _cell.length_c 66.570 _cell.angle_alpha 90.00 _cell.angle_beta 114.99 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TB7 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3TB7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.2 M Tris, 0.2 M ammonium acetate, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9748 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9748 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3TB7 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60.34 _reflns.d_resolution_high 2.450 _reflns.number_obs 8218 _reflns.number_all 8228 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.040 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.45 _reflns_shell.d_res_low 2.5 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.125 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 13.1 _reflns_shell.pdbx_redundancy 7.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3TB7 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7834 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.150 _refine.ls_d_res_high 2.45 _refine.ls_percent_reflns_obs 99.88 _refine.ls_R_factor_obs 0.23173 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22815 _refine.ls_R_factor_R_free 0.30777 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 381 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.913 _refine.correlation_coeff_Fo_to_Fc_free 0.846 _refine.B_iso_mean 31.762 _refine.aniso_B[1][1] -0.33 _refine.aniso_B[2][2] 0.78 _refine.aniso_B[3][3] -0.70 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.30 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.499 _refine.pdbx_overall_ESU_R_Free 0.333 _refine.overall_SU_ML 0.213 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.807 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1448 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1478 _refine_hist.d_res_high 2.45 _refine_hist.d_res_low 27.150 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 1475 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.134 1.956 ? 2004 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.074 5.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.982 23.636 ? 66 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.132 15.000 ? 241 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.651 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.100 0.200 ? 233 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 1114 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.942 1.500 ? 932 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.782 2.000 ? 1499 'X-RAY DIFFRACTION' ? r_scbond_it 2.793 3.000 ? 543 'X-RAY DIFFRACTION' ? r_scangle_it 4.590 4.500 ? 505 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.450 _refine_ls_shell.d_res_low 2.514 _refine_ls_shell.number_reflns_R_work 572 _refine_ls_shell.R_factor_R_work 0.253 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 CNS_TOPPAR:protein_rep.param CNS_TOPPAR:protein.top 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:dna-rna_rep.param CNS_TOPPAR:dna-rna.top 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:water_rep.param CNS_TOPPAR:water.top 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:ion.param CNS_TOPPAR:ion.top # _database_PDB_matrix.entry_id 3TB7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3TB7 _struct.title 'The type I crystal structure of Streptococcus agalactiae sortase C1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TB7 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Beta-barrel, Pili biogenesis, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8E0S7_STRA5 _struct_ref.pdbx_db_accession Q8E0S7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SHANINAFKEAVTKIDRVEINRRLELAYAYNASIAGAKTNGEYPALKDPYSAEQKQAGVVEYARMLEVKEQIGHVIIPRI NQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKV IAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKTVQKDSKTFRQQQ ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TB7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 230 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8E0S7 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 260 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 219 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3TB7 MET A 1 ? UNP Q8E0S7 ? ? 'expression tag' -10 1 1 3TB7 ARG A 2 ? UNP Q8E0S7 ? ? 'expression tag' -9 2 1 3TB7 GLY A 3 ? UNP Q8E0S7 ? ? 'expression tag' -8 3 1 3TB7 SER A 4 ? UNP Q8E0S7 ? ? 'expression tag' -7 4 1 3TB7 HIS A 5 ? UNP Q8E0S7 ? ? 'expression tag' -6 5 1 3TB7 HIS A 6 ? UNP Q8E0S7 ? ? 'expression tag' -5 6 1 3TB7 HIS A 7 ? UNP Q8E0S7 ? ? 'expression tag' -4 7 1 3TB7 HIS A 8 ? UNP Q8E0S7 ? ? 'expression tag' -3 8 1 3TB7 HIS A 9 ? UNP Q8E0S7 ? ? 'expression tag' -2 9 1 3TB7 HIS A 10 ? UNP Q8E0S7 ? ? 'expression tag' -1 10 1 3TB7 GLY A 11 ? UNP Q8E0S7 ? ? 'expression tag' 0 11 1 3TB7 SER A 12 ? UNP Q8E0S7 ? ? 'expression tag' 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 17 ? LYS A 26 ? ILE A 6 LYS A 15 1 ? 10 HELX_P HELX_P2 2 ASP A 28 ? GLY A 48 ? ASP A 17 GLY A 37 1 ? 21 HELX_P HELX_P3 3 SER A 63 ? VAL A 80 ? SER A 52 VAL A 69 1 ? 18 HELX_P HELX_P4 4 PRO A 90 ? ASN A 93 ? PRO A 79 ASN A 82 5 ? 4 HELX_P HELX_P5 5 ALA A 103 ? GLN A 108 ? ALA A 92 GLN A 97 1 ? 6 HELX_P HELX_P6 6 ASN A 144 ? VAL A 148 ? ASN A 133 VAL A 137 5 ? 5 HELX_P HELX_P7 7 LEU A 178 ? TYR A 182 ? LEU A 167 TYR A 171 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 196 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 185 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 197 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 186 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 83 ? ILE A 89 ? GLN A 72 ILE A 78 A 2 GLN A 94 ? ALA A 100 ? GLN A 83 ALA A 89 A 3 VAL A 111 ? HIS A 113 ? VAL A 100 HIS A 102 A 4 THR A 126 ? THR A 131 ? THR A 115 THR A 120 A 5 ASP A 188 ? THR A 196 ? ASP A 177 THR A 185 A 6 HIS A 203 ? ILE A 212 ? HIS A 192 ILE A 201 A 7 GLY A 161 ? ILE A 173 ? GLY A 150 ILE A 162 A 8 ARG A 153 ? HIS A 158 ? ARG A 142 HIS A 147 A 9 GLN A 83 ? ILE A 89 ? GLN A 72 ILE A 78 B 1 ARG A 134 ? LEU A 136 ? ARG A 123 LEU A 125 B 2 ALA A 139 ? LEU A 141 ? ALA A 128 LEU A 130 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 85 ? N GLY A 74 O ILE A 98 ? O ILE A 87 A 2 3 N TYR A 99 ? N TYR A 88 O HIS A 113 ? O HIS A 102 A 3 4 N GLY A 112 ? N GLY A 101 O THR A 131 ? O THR A 120 A 4 5 N LEU A 130 ? N LEU A 119 O LEU A 193 ? O LEU A 182 A 5 6 N VAL A 190 ? N VAL A 179 O GLY A 209 ? O GLY A 198 A 6 7 O ARG A 208 ? O ARG A 197 N GLN A 169 ? N GLN A 158 A 7 8 O TYR A 165 ? O TYR A 154 N PHE A 154 ? N PHE A 143 A 8 9 O GLU A 157 ? O GLU A 146 N HIS A 86 ? N HIS A 75 B 1 2 N LEU A 136 ? N LEU A 125 O ALA A 139 ? O ALA A 128 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 197 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 197 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 197 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.11 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.19 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 8 ? ? -68.43 1.44 2 1 PRO A 126 ? ? -34.85 113.60 3 1 THR A 127 ? ? 72.80 -26.64 4 1 LEU A 130 ? ? 58.53 -128.17 5 1 VAL A 139 ? ? -35.66 132.04 6 1 HIS A 147 ? ? -106.85 -168.91 7 1 MET A 188 ? ? 75.27 -53.05 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -10 ? A MET 1 2 1 Y 1 A ARG -9 ? A ARG 2 3 1 Y 1 A GLY -8 ? A GLY 3 4 1 Y 1 A SER -7 ? A SER 4 5 1 Y 1 A HIS -6 ? A HIS 5 6 1 Y 1 A HIS -5 ? A HIS 6 7 1 Y 1 A HIS -4 ? A HIS 7 8 1 Y 1 A HIS -3 ? A HIS 8 9 1 Y 1 A HIS -2 ? A HIS 9 10 1 Y 1 A HIS -1 ? A HIS 10 11 1 Y 1 A GLY 0 ? A GLY 11 12 1 Y 1 A SER 1 ? A SER 12 13 1 Y 1 A SER 2 ? A SER 13 14 1 Y 1 A HIS 3 ? A HIS 14 15 1 Y 1 A ALA 4 ? A ALA 15 16 1 Y 1 A ALA 38 ? A ALA 49 17 1 Y 1 A LYS 39 ? A LYS 50 18 1 Y 1 A THR 40 ? A THR 51 19 1 Y 1 A ASN 41 ? A ASN 52 20 1 Y 1 A GLY 42 ? A GLY 53 21 1 Y 1 A GLU 43 ? A GLU 54 22 1 Y 1 A TYR 44 ? A TYR 55 23 1 Y 1 A PRO 45 ? A PRO 56 24 1 Y 1 A ALA 46 ? A ALA 57 25 1 Y 1 A LEU 47 ? A LEU 58 26 1 Y 1 A LYS 48 ? A LYS 59 27 1 Y 1 A ASP 49 ? A ASP 60 28 1 Y 1 A GLU 205 ? A GLU 216 29 1 Y 1 A LYS 206 ? A LYS 217 30 1 Y 1 A THR 207 ? A THR 218 31 1 Y 1 A VAL 208 ? A VAL 219 32 1 Y 1 A GLN 209 ? A GLN 220 33 1 Y 1 A LYS 210 ? A LYS 221 34 1 Y 1 A ASP 211 ? A ASP 222 35 1 Y 1 A SER 212 ? A SER 223 36 1 Y 1 A LYS 213 ? A LYS 224 37 1 Y 1 A THR 214 ? A THR 225 38 1 Y 1 A PHE 215 ? A PHE 226 39 1 Y 1 A ARG 216 ? A ARG 227 40 1 Y 1 A GLN 217 ? A GLN 228 41 1 Y 1 A GLN 218 ? A GLN 229 42 1 Y 1 A GLN 219 ? A GLN 230 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _atom_sites.entry_id 3TB7 _atom_sites.fract_transf_matrix[1][1] 0.012724 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005931 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021308 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016573 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_