HEADER VIRAL PROTEIN 09-AUG-11 3TCQ TITLE CRYSTAL STRUCTURE OF MATRIX PROTEIN VP40 FROM EBOLA VIRUS SUDAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATRIX PROTEIN VP40; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUDAN EBOLAVIRUS; SOURCE 3 ORGANISM_TAXID: 128948; SOURCE 4 STRAIN: BONIFACE-76; SOURCE 5 GENE: VP40, SEBOVGP3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SEATTLE STRUCTURAL GENOMICS CENTERS FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 2 EBOLA, SEBOV, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 3 DISEASE, MATRIX PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.C.CLIFTON,T.E.EDWARDS,V.ANDERSON,K.ATKINS,A.RAYMOND,E.O.SAPHIRE, AUTHOR 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 5 13-SEP-23 3TCQ 1 REMARK REVDAT 4 08-NOV-17 3TCQ 1 REMARK REVDAT 3 20-JAN-16 3TCQ 1 JRNL REVDAT 2 10-OCT-12 3TCQ 1 REMARK REVDAT 1 03-OCT-12 3TCQ 0 JRNL AUTH M.C.CLIFTON,J.F.BRUHN,K.ATKINS,T.L.WEBB,R.O.BAYDO,A.RAYMOND, JRNL AUTH 2 D.D.LORIMER,T.E.EDWARDS,P.J.MYLER,E.O.SAPHIRE JRNL TITL HIGH-RESOLUTION CRYSTAL STRUCTURE OF DIMERIC VP40 FROM SUDAN JRNL TITL 2 EBOLAVIRUS. JRNL REF J INFECT DIS V.PL 2 S167 2015 JRNL REFN ISSN 0022-1899 JRNL PMID 25957961 JRNL DOI 10.1093/INFDIS/JIV090 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 34411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1808 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2528 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1791 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.10000 REMARK 3 B22 (A**2) : -3.47000 REMARK 3 B33 (A**2) : -0.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.56000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.087 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.768 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1873 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1862 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2573 ; 1.590 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4300 ; 0.812 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 247 ; 6.562 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;42.665 ;24.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 300 ;15.181 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;10.770 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 315 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2063 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 375 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 189 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7549 26.6247 17.2592 REMARK 3 T TENSOR REMARK 3 T11: 0.0521 T22: 0.1455 REMARK 3 T33: 0.1198 T12: 0.0073 REMARK 3 T13: 0.0485 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.7414 L22: 1.6982 REMARK 3 L33: 0.8707 L12: 0.3042 REMARK 3 L13: 0.2310 L23: 0.0169 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: -0.0066 S13: 0.0183 REMARK 3 S21: -0.0938 S22: -0.0051 S23: 0.2404 REMARK 3 S31: 0.0465 S32: -0.1239 S33: 0.0230 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 190 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5233 41.7029 2.7384 REMARK 3 T TENSOR REMARK 3 T11: 0.2461 T22: 0.3620 REMARK 3 T33: 0.2924 T12: 0.0425 REMARK 3 T13: -0.0765 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 2.7525 L22: 1.5127 REMARK 3 L33: 0.5972 L12: 0.2171 REMARK 3 L13: 0.1180 L23: -0.7101 REMARK 3 S TENSOR REMARK 3 S11: 0.1084 S12: -0.2778 S13: 0.0738 REMARK 3 S21: -0.1063 S22: -0.0394 S23: 0.3987 REMARK 3 S31: -0.0404 S32: -0.2516 S33: -0.0690 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9394 41.8198 -2.0691 REMARK 3 T TENSOR REMARK 3 T11: 0.1834 T22: 0.1731 REMARK 3 T33: 0.1310 T12: -0.0240 REMARK 3 T13: -0.0239 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.9998 L22: 3.7853 REMARK 3 L33: 1.4325 L12: -1.0578 REMARK 3 L13: 0.2407 L23: -1.9383 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: 0.1305 S13: 0.1464 REMARK 3 S21: -0.2975 S22: 0.0241 S23: 0.0598 REMARK 3 S31: 0.0274 S32: -0.0267 S33: -0.0087 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 293 A 308 REMARK 3 ORIGIN FOR THE GROUP (A): 6.7255 36.7327 -2.4899 REMARK 3 T TENSOR REMARK 3 T11: 0.4794 T22: 0.3713 REMARK 3 T33: 0.1873 T12: 0.0054 REMARK 3 T13: -0.0538 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 2.9940 L22: 4.7211 REMARK 3 L33: 0.0515 L12: -0.1475 REMARK 3 L13: 0.3698 L23: 0.0742 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: 0.0418 S13: -0.2484 REMARK 3 S21: -0.3362 S22: 0.0043 S23: 0.2572 REMARK 3 S31: 0.0384 S32: 0.0028 S33: -0.0262 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TCQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067320. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36225 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 27.368 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8210 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.481 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 4DUT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11MG/ML EBSUA.17247.A PD00181, 10% REMARK 280 PEG4000, 20% GLYCEROL, 0.1M MES PH 6.5. DIRECT CRYOPROTECTION. , REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K, PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 31.99100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.47000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 31.99100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.47000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ARG A 3 REMARK 465 VAL A 4 REMARK 465 THR A 5 REMARK 465 VAL A 6 REMARK 465 PRO A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 PRO A 10 REMARK 465 PRO A 11 REMARK 465 ALA A 12 REMARK 465 TYR A 13 REMARK 465 ALA A 14 REMARK 465 ASP A 15 REMARK 465 ILE A 16 REMARK 465 GLY A 17 REMARK 465 TYR A 18 REMARK 465 PRO A 19 REMARK 465 MET A 20 REMARK 465 SER A 21 REMARK 465 MET A 22 REMARK 465 LEU A 23 REMARK 465 PRO A 24 REMARK 465 ILE A 25 REMARK 465 LYS A 26 REMARK 465 SER A 27 REMARK 465 SER A 28 REMARK 465 ARG A 29 REMARK 465 ALA A 30 REMARK 465 VAL A 31 REMARK 465 SER A 32 REMARK 465 GLY A 33 REMARK 465 ILE A 34 REMARK 465 GLN A 35 REMARK 465 GLN A 36 REMARK 465 LYS A 37 REMARK 465 GLN A 38 REMARK 465 GLU A 39 REMARK 465 VAL A 40 REMARK 465 LEU A 41 REMARK 465 PRO A 42 REMARK 465 GLY A 43 REMARK 465 GLU A 194 REMARK 465 THR A 195 REMARK 465 PRO A 196 REMARK 465 SER A 197 REMARK 465 ASN A 198 REMARK 465 LEU A 199 REMARK 465 SER A 200 REMARK 465 GLY A 201 REMARK 465 ALA A 202 REMARK 465 LEU A 203 REMARK 465 LYS A 221 REMARK 465 THR A 222 REMARK 465 GLY A 223 REMARK 465 LYS A 224 REMARK 465 LYS A 225 REMARK 465 GLY A 226 REMARK 465 HIS A 227 REMARK 465 VAL A 228 REMARK 465 SER A 229 REMARK 465 ASP A 230 REMARK 465 LEU A 231 REMARK 465 LEU A 295 REMARK 465 ASP A 296 REMARK 465 PRO A 297 REMARK 465 ILE A 298 REMARK 465 SER A 299 REMARK 465 PRO A 309 REMARK 465 ASP A 310 REMARK 465 TYR A 311 REMARK 465 ASP A 312 REMARK 465 ASP A 313 REMARK 465 CYS A 314 REMARK 465 HIS A 315 REMARK 465 SER A 316 REMARK 465 PRO A 317 REMARK 465 ALA A 318 REMARK 465 SER A 319 REMARK 465 CYS A 320 REMARK 465 SER A 321 REMARK 465 TYR A 322 REMARK 465 LEU A 323 REMARK 465 SER A 324 REMARK 465 GLU A 325 REMARK 465 LYS A 326 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 44 CG SD CE REMARK 470 ASP A 45 CG OD1 OD2 REMARK 470 GLN A 167 CG CD OE1 NE2 REMARK 470 ARG A 204 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 214 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 235 CG OD1 OD2 REMARK 470 GLN A 238 CG CD OE1 NE2 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 SER A 277 OG REMARK 470 GLN A 278 CG CD OE1 NE2 REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 ILE A 293 CG1 CG2 CD1 REMARK 470 ASP A 302 CG OD1 OD2 REMARK 470 THR A 304 OG1 CG2 REMARK 470 VAL A 306 CG1 CG2 REMARK 470 THR A 308 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 117 52.22 -100.58 REMARK 500 ASP A 144 19.74 57.53 REMARK 500 MET A 276 -137.86 -109.28 REMARK 500 ASP A 302 0.48 92.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EBSUA.17247.A RELATED DB: TARGETDB DBREF 3TCQ A 1 326 UNP B0LPL6 B0LPL6_9MONO 1 326 SEQRES 1 A 326 MET ARG ARG VAL THR VAL PRO THR ALA PRO PRO ALA TYR SEQRES 2 A 326 ALA ASP ILE GLY TYR PRO MET SER MET LEU PRO ILE LYS SEQRES 3 A 326 SER SER ARG ALA VAL SER GLY ILE GLN GLN LYS GLN GLU SEQRES 4 A 326 VAL LEU PRO GLY MET ASP THR PRO SER ASN SER MET ARG SEQRES 5 A 326 PRO VAL ALA ASP ASP ASN ILE ASP HIS THR SER HIS THR SEQRES 6 A 326 PRO ASN GLY VAL ALA SER ALA PHE ILE LEU GLU ALA THR SEQRES 7 A 326 VAL ASN VAL ILE SER GLY PRO LYS VAL LEU MET LYS GLN SEQRES 8 A 326 ILE PRO ILE TRP LEU PRO LEU GLY ILE ALA ASP GLN LYS SEQRES 9 A 326 THR TYR SER PHE ASP SER THR THR ALA ALA ILE MET LEU SEQRES 10 A 326 ALA SER TYR THR ILE THR HIS PHE GLY LYS ALA ASN ASN SEQRES 11 A 326 PRO LEU VAL ARG VAL ASN ARG LEU GLY GLN GLY ILE PRO SEQRES 12 A 326 ASP HIS PRO LEU ARG LEU LEU ARG MET GLY ASN GLN ALA SEQRES 13 A 326 PHE LEU GLN GLU PHE VAL LEU PRO PRO VAL GLN LEU PRO SEQRES 14 A 326 GLN TYR PHE THR PHE ASP LEU THR ALA LEU LYS LEU VAL SEQRES 15 A 326 THR GLN PRO LEU PRO ALA ALA THR TRP THR ASP GLU THR SEQRES 16 A 326 PRO SER ASN LEU SER GLY ALA LEU ARG PRO GLY LEU SER SEQRES 17 A 326 PHE HIS PRO LYS LEU ARG PRO VAL LEU LEU PRO GLY LYS SEQRES 18 A 326 THR GLY LYS LYS GLY HIS VAL SER ASP LEU THR ALA PRO SEQRES 19 A 326 ASP LYS ILE GLN THR ILE VAL ASN LEU MET GLN ASP PHE SEQRES 20 A 326 LYS ILE VAL PRO ILE ASP PRO ALA LYS SER ILE ILE GLY SEQRES 21 A 326 ILE GLU VAL PRO GLU LEU LEU VAL HIS LYS LEU THR GLY SEQRES 22 A 326 LYS LYS MET SER GLN LYS ASN GLY GLN PRO ILE ILE PRO SEQRES 23 A 326 VAL LEU LEU PRO LYS TYR ILE GLY LEU ASP PRO ILE SER SEQRES 24 A 326 PRO GLY ASP LEU THR MET VAL ILE THR PRO ASP TYR ASP SEQRES 25 A 326 ASP CYS HIS SER PRO ALA SER CYS SER TYR LEU SER GLU SEQRES 26 A 326 LYS FORMUL 2 HOH *148(H2 O) HELIX 1 1 ASP A 60 HIS A 64 5 5 HELIX 2 2 SER A 107 LEU A 117 1 11 HELIX 3 3 LEU A 147 GLY A 153 1 7 HELIX 4 4 GLN A 159 LEU A 163 1 5 HELIX 5 5 ALA A 233 MET A 244 1 12 HELIX 6 6 GLN A 245 PHE A 247 5 3 HELIX 7 7 PRO A 254 LYS A 256 5 3 HELIX 8 8 PRO A 264 GLY A 273 1 10 SHEET 1 A 4 VAL A 54 ALA A 55 0 SHEET 2 A 4 THR A 173 PRO A 185 1 O LEU A 181 N VAL A 54 SHEET 3 A 4 SER A 71 SER A 83 -1 N ILE A 82 O THR A 173 SHEET 4 A 4 LYS A 86 ALA A 101 -1 O ILE A 94 N ALA A 77 SHEET 1 B 3 SER A 119 PHE A 125 0 SHEET 2 B 3 LEU A 132 LEU A 138 -1 O LEU A 138 N SER A 119 SHEET 3 B 3 ASN A 154 LEU A 158 -1 O GLN A 155 N VAL A 135 SHEET 1 C 3 VAL A 216 LEU A 217 0 SHEET 2 C 3 PRO A 205 SER A 208 -1 N LEU A 207 O VAL A 216 SHEET 3 C 3 THR A 304 ILE A 307 -1 O VAL A 306 N GLY A 206 SHEET 1 D 3 LYS A 248 ASP A 253 0 SHEET 2 D 3 ILE A 258 GLU A 262 -1 O GLU A 262 N LYS A 248 SHEET 3 D 3 ILE A 284 LEU A 288 -1 O VAL A 287 N ILE A 259 CISPEP 1 MET A 44 ASP A 45 0 -25.11 CRYST1 63.982 90.940 48.684 90.00 95.86 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015629 0.000000 0.001604 0.00000 SCALE2 0.000000 0.010996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020649 0.00000