HEADER METAL BINDING PROTEIN 09-AUG-11 3TCS TITLE CRYSTAL STRUCTURE OF A PUTATIVE RACEMASE FROM ROSEOBACTER TITLE 2 DENITRIFICANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RACEMASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROSEOBACTER DENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 375451; SOURCE 4 STRAIN: ATCC 33942 / OCH 114; SOURCE 5 GENE: RD1_3860; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS PSI-BIOLOGY, NYSGRC, STRUCTURAL GENOMICS, NEW YORK STRUCTURAL KEYWDS 2 GENOMICS RESEARCH CONSORTIUM, TIM BARREL, METAL BINDING, METAL KEYWDS 3 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.ESWARAMOORTHY,S.CHAMALA,B.EVANS,R.FOTI,A.GIZZI,B.HILLERICH,A.KAR, AUTHOR 2 J.LAFLEUR,R.SEIDEL,G.VILLIGAS,W.ZENCHECK,S.C.ALMO,S.SWAMINATHAN,NEW AUTHOR 3 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 2 13-SEP-23 3TCS 1 REMARK SEQADV LINK REVDAT 1 31-AUG-11 3TCS 0 JRNL AUTH S.ESWARAMOORTHY,S.C.ALMO,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE RACEMASE FROM ROSEOBACTER JRNL TITL 2 DENITRIFICANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 72505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3703 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 509 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5806 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 229 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.94000 REMARK 3 B22 (A**2) : 3.92000 REMARK 3 B33 (A**2) : -1.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.04 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.10 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.090 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.585 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.851 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.731 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : LIGAND2.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TCS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.045 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73698 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3N4E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG MME 550, 0.1M HEPES, 0.05M REMARK 280 MGCL2, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 91.24600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.37250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 91.24600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.37250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 391 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 373 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 34 112.25 85.23 REMARK 500 ASN A 155 -8.43 73.75 REMARK 500 TRP A 159 149.38 -173.07 REMARK 500 GLU A 216 70.96 -113.86 REMARK 500 SER A 290 -167.34 -79.09 REMARK 500 TYR B 34 114.49 84.45 REMARK 500 ASP B 58 75.63 -101.96 REMARK 500 ASP B 122 49.96 -90.08 REMARK 500 ASN B 155 -5.46 77.27 REMARK 500 ASN B 185 57.98 39.48 REMARK 500 GLU B 216 77.70 -112.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 DAL A 370 REMARK 610 DAL B 370 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 368 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 183 OD2 REMARK 620 2 GLU A 209 OE2 85.6 REMARK 620 3 GLU A 235 OE1 171.3 93.6 REMARK 620 4 DAL A 370 O 92.1 172.1 89.8 REMARK 620 5 HOH A 402 O 82.1 105.4 89.9 81.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 369 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 224 O REMARK 620 2 LEU A 227 O 86.0 REMARK 620 3 HOH A 418 O 73.6 90.8 REMARK 620 4 HOH A 419 O 81.4 165.2 93.1 REMARK 620 5 HOH A 420 O 166.4 83.8 97.5 109.8 REMARK 620 6 HOH A 421 O 86.6 67.9 152.0 103.5 97.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 368 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 183 OD2 REMARK 620 2 GLU B 209 OE2 90.0 REMARK 620 3 GLU B 235 OE1 177.2 89.2 REMARK 620 4 DAL B 370 O 88.3 167.5 93.0 REMARK 620 5 HOH B 379 O 86.2 108.8 91.5 83.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 369 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 224 O REMARK 620 2 LEU B 227 O 96.2 REMARK 620 3 HOH B 398 O 92.8 170.6 REMARK 620 4 HOH B 406 O 94.0 90.7 86.2 REMARK 620 5 HOH B 412 O 92.6 90.9 91.2 173.0 REMARK 620 6 HOH B 416 O 175.2 88.3 82.6 84.3 89.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 367 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 368 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 369 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DAL A 370 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 371 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 372 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 367 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 368 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 369 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DAL B 370 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 371 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 372 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-200604 RELATED DB: TARGETDB DBREF 3TCS A 1 366 UNP Q161M1 Q161M1_ROSDO 1 366 DBREF 3TCS B 1 366 UNP Q161M1 Q161M1_ROSDO 1 366 SEQADV 3TCS MET A -21 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS A -20 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS A -19 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS A -18 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS A -17 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS A -16 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS A -15 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS SER A -14 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS SER A -13 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLY A -12 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS VAL A -11 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS ASP A -10 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS LEU A -9 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLY A -8 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS THR A -7 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLU A -6 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS ASN A -5 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS LEU A -4 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS TYR A -3 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS PHE A -2 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLN A -1 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS SER A 0 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS MET B -21 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS B -20 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS B -19 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS B -18 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS B -17 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS B -16 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS HIS B -15 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS SER B -14 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS SER B -13 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLY B -12 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS VAL B -11 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS ASP B -10 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS LEU B -9 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLY B -8 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS THR B -7 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLU B -6 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS ASN B -5 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS LEU B -4 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS TYR B -3 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS PHE B -2 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS GLN B -1 UNP Q161M1 EXPRESSION TAG SEQADV 3TCS SER B 0 UNP Q161M1 EXPRESSION TAG SEQRES 1 A 388 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 388 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU LYS SEQRES 3 A 388 ALA ILE GLU THR PHE THR ASN ASP ALA VAL GLY PHE VAL SEQRES 4 A 388 ARG VAL THR THR GLN ASP GLY ALA GLN GLY TRP GLY GLN SEQRES 5 A 388 VAL SER THR TYR HIS ALA ASP ILE THR CYS THR VAL LEU SEQRES 6 A 388 HIS ARG GLN VAL ALA PRO TRP MET LEU GLY GLN ASP ILE SEQRES 7 A 388 THR ASP LEU ASP ASP LEU LEU ASP ILE VAL THR GLU ARG SEQRES 8 A 388 GLU HIS LYS PHE PRO GLY SER TYR LEU ARG ARG ALA MET SEQRES 9 A 388 ALA GLY VAL ASP THR ALA ILE TRP ASP LEU ARG GLY LYS SEQRES 10 A 388 GLN GLN GLY LYS PRO VAL ALA GLU VAL LEU GLY GLY THR SEQRES 11 A 388 PRO GLY LEU ILE ARG ALA TYR ALA SER SER MET LYS ARG SEQRES 12 A 388 ASP ILE THR PRO ARG ASP GLU ALA GLU ARG LEU LYS ARG SEQRES 13 A 388 LEU ARG ASP THR GLN GLY PHE THR ALA PHE LYS VAL ARG SEQRES 14 A 388 ALA GLY ALA GLU VAL GLY ARG ASN ARG ASP GLU TRP PRO SEQRES 15 A 388 GLY ARG THR GLU GLU ILE ILE PRO THR MET ARG ARG GLU SEQRES 16 A 388 LEU GLY ASP ASP VAL ASP LEU LEU ILE ASP ALA ASN SER SEQRES 17 A 388 CYS TYR THR PRO ASP ARG ALA ILE GLU VAL GLY HIS MET SEQRES 18 A 388 LEU GLN ASP HIS GLY PHE CYS HIS PHE GLU GLU PRO CYS SEQRES 19 A 388 PRO TYR TRP GLU LEU ALA GLN THR LYS GLN VAL THR ASP SEQRES 20 A 388 ALA LEU ASP ILE ASP VAL THR GLY GLY GLU GLN ASP CYS SEQRES 21 A 388 ASP LEU PRO THR TRP GLN ARG MET ILE ASP MET ARG ALA SEQRES 22 A 388 VAL ASP ILE VAL GLN PRO ASP ILE LEU TYR LEU GLY GLY SEQRES 23 A 388 ILE CYS ARG THR LEU ARG VAL VAL GLU MET ALA ARG ALA SEQRES 24 A 388 ALA GLY LEU PRO VAL THR PRO HIS CYS ALA ASN TRP SER SEQRES 25 A 388 LEU VAL THR LEU PHE THR MET HIS LEU LEU ARG ALA ILE SEQRES 26 A 388 PRO ASN ALA GLY LYS TYR LEU GLU PHE SER ILE GLU GLY SEQRES 27 A 388 PRO ASP TYR TYR PRO TRP GLN GLU GLY LEU PHE VAL LYS SEQRES 28 A 388 THR PRO TYR GLU ILE GLU ASP GLY HIS ALA ARG VAL THR SEQRES 29 A 388 ASP ALA PRO GLY TRP GLY VAL GLU ILE SER PRO GLU TRP SEQRES 30 A 388 LEU ALA ARG SER GLN TYR GLN SER SER GLU ILE SEQRES 1 B 388 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 388 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU LYS SEQRES 3 B 388 ALA ILE GLU THR PHE THR ASN ASP ALA VAL GLY PHE VAL SEQRES 4 B 388 ARG VAL THR THR GLN ASP GLY ALA GLN GLY TRP GLY GLN SEQRES 5 B 388 VAL SER THR TYR HIS ALA ASP ILE THR CYS THR VAL LEU SEQRES 6 B 388 HIS ARG GLN VAL ALA PRO TRP MET LEU GLY GLN ASP ILE SEQRES 7 B 388 THR ASP LEU ASP ASP LEU LEU ASP ILE VAL THR GLU ARG SEQRES 8 B 388 GLU HIS LYS PHE PRO GLY SER TYR LEU ARG ARG ALA MET SEQRES 9 B 388 ALA GLY VAL ASP THR ALA ILE TRP ASP LEU ARG GLY LYS SEQRES 10 B 388 GLN GLN GLY LYS PRO VAL ALA GLU VAL LEU GLY GLY THR SEQRES 11 B 388 PRO GLY LEU ILE ARG ALA TYR ALA SER SER MET LYS ARG SEQRES 12 B 388 ASP ILE THR PRO ARG ASP GLU ALA GLU ARG LEU LYS ARG SEQRES 13 B 388 LEU ARG ASP THR GLN GLY PHE THR ALA PHE LYS VAL ARG SEQRES 14 B 388 ALA GLY ALA GLU VAL GLY ARG ASN ARG ASP GLU TRP PRO SEQRES 15 B 388 GLY ARG THR GLU GLU ILE ILE PRO THR MET ARG ARG GLU SEQRES 16 B 388 LEU GLY ASP ASP VAL ASP LEU LEU ILE ASP ALA ASN SER SEQRES 17 B 388 CYS TYR THR PRO ASP ARG ALA ILE GLU VAL GLY HIS MET SEQRES 18 B 388 LEU GLN ASP HIS GLY PHE CYS HIS PHE GLU GLU PRO CYS SEQRES 19 B 388 PRO TYR TRP GLU LEU ALA GLN THR LYS GLN VAL THR ASP SEQRES 20 B 388 ALA LEU ASP ILE ASP VAL THR GLY GLY GLU GLN ASP CYS SEQRES 21 B 388 ASP LEU PRO THR TRP GLN ARG MET ILE ASP MET ARG ALA SEQRES 22 B 388 VAL ASP ILE VAL GLN PRO ASP ILE LEU TYR LEU GLY GLY SEQRES 23 B 388 ILE CYS ARG THR LEU ARG VAL VAL GLU MET ALA ARG ALA SEQRES 24 B 388 ALA GLY LEU PRO VAL THR PRO HIS CYS ALA ASN TRP SER SEQRES 25 B 388 LEU VAL THR LEU PHE THR MET HIS LEU LEU ARG ALA ILE SEQRES 26 B 388 PRO ASN ALA GLY LYS TYR LEU GLU PHE SER ILE GLU GLY SEQRES 27 B 388 PRO ASP TYR TYR PRO TRP GLN GLU GLY LEU PHE VAL LYS SEQRES 28 B 388 THR PRO TYR GLU ILE GLU ASP GLY HIS ALA ARG VAL THR SEQRES 29 B 388 ASP ALA PRO GLY TRP GLY VAL GLU ILE SER PRO GLU TRP SEQRES 30 B 388 LEU ALA ARG SER GLN TYR GLN SER SER GLU ILE HET CL A 367 1 HET MG A 368 1 HET MG A 369 1 HET DAL A 370 5 HET GOL A 371 6 HET PG4 A 372 13 HET CL B 367 1 HET MG B 368 1 HET MG B 369 1 HET DAL B 370 5 HET GOL B 371 6 HET PG4 B 372 13 HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM DAL D-ALANINE HETNAM GOL GLYCEROL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL 2(CL 1-) FORMUL 4 MG 4(MG 2+) FORMUL 6 DAL 2(C3 H7 N O2) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 8 PG4 2(C8 H18 O5) FORMUL 15 HOH *229(H2 O) HELIX 1 1 HIS A 35 VAL A 47 1 13 HELIX 2 2 VAL A 47 LEU A 52 1 6 HELIX 3 3 ASP A 58 GLU A 70 1 13 HELIX 4 4 GLY A 75 GLY A 98 1 24 HELIX 5 5 PRO A 100 LEU A 105 1 6 HELIX 6 6 THR A 124 GLY A 140 1 17 HELIX 7 7 GLY A 161 GLY A 175 1 15 HELIX 8 8 THR A 189 HIS A 203 1 15 HELIX 9 9 GLU A 216 LEU A 227 1 12 HELIX 10 10 ASP A 239 ARG A 250 1 12 HELIX 11 11 ASP A 258 GLY A 263 1 6 HELIX 12 12 GLY A 264 ALA A 278 1 15 HELIX 13 13 LEU A 291 ARG A 301 1 11 HELIX 14 14 TYR A 320 GLU A 324 5 5 HELIX 15 15 SER A 352 SER A 359 1 8 HELIX 16 16 HIS B 35 VAL B 47 1 13 HELIX 17 17 VAL B 47 LEU B 52 1 6 HELIX 18 18 ASP B 58 GLU B 70 1 13 HELIX 19 19 GLY B 75 GLY B 98 1 24 HELIX 20 20 PRO B 100 LEU B 105 1 6 HELIX 21 21 THR B 124 GLY B 140 1 17 HELIX 22 22 GLY B 161 GLY B 175 1 15 HELIX 23 23 THR B 189 HIS B 203 1 15 HELIX 24 24 GLU B 216 LEU B 227 1 12 HELIX 25 25 ASP B 239 MET B 249 1 11 HELIX 26 26 GLY B 264 GLY B 279 1 16 HELIX 27 27 LEU B 291 ARG B 301 1 11 HELIX 28 28 TYR B 320 GLU B 324 5 5 HELIX 29 29 SER B 352 SER B 359 1 8 SHEET 1 A 4 GLN A 26 GLN A 30 0 SHEET 2 A 4 GLY A 15 THR A 21 -1 N VAL A 17 O GLY A 29 SHEET 3 A 4 LEU A 3 THR A 10 -1 N LYS A 4 O THR A 20 SHEET 4 A 4 GLN A 360 GLU A 365 -1 O GLN A 360 N THR A 10 SHEET 1 B 7 ILE A 254 VAL A 255 0 SHEET 2 B 7 VAL A 231 GLY A 233 1 N GLY A 233 O ILE A 254 SHEET 3 B 7 HIS A 207 GLU A 209 1 N PHE A 208 O THR A 232 SHEET 4 B 7 ASP A 179 ASP A 183 1 N ILE A 182 O GLU A 209 SHEET 5 B 7 ALA A 143 ARG A 147 1 N PHE A 144 O LEU A 181 SHEET 6 B 7 GLY A 110 SER A 117 1 N ALA A 116 O LYS A 145 SHEET 7 B 7 LEU A 310 SER A 313 1 O PHE A 312 N SER A 117 SHEET 1 C 7 ILE A 254 VAL A 255 0 SHEET 2 C 7 VAL A 231 GLY A 233 1 N GLY A 233 O ILE A 254 SHEET 3 C 7 HIS A 207 GLU A 209 1 N PHE A 208 O THR A 232 SHEET 4 C 7 ASP A 179 ASP A 183 1 N ILE A 182 O GLU A 209 SHEET 5 C 7 ALA A 143 ARG A 147 1 N PHE A 144 O LEU A 181 SHEET 6 C 7 GLY A 110 SER A 117 1 N ALA A 116 O LYS A 145 SHEET 7 C 7 HIS A 338 VAL A 341 -1 O VAL A 341 N GLY A 110 SHEET 1 D 4 GLN B 26 GLN B 30 0 SHEET 2 D 4 GLY B 15 THR B 21 -1 N VAL B 17 O GLY B 29 SHEET 3 D 4 LEU B 3 THR B 10 -1 N LYS B 4 O THR B 20 SHEET 4 D 4 GLN B 360 GLU B 365 -1 O GLN B 360 N THR B 10 SHEET 1 E 7 ILE B 254 VAL B 255 0 SHEET 2 E 7 ASP B 230 GLY B 233 1 N GLY B 233 O ILE B 254 SHEET 3 E 7 HIS B 207 GLU B 209 1 N PHE B 208 O ASP B 230 SHEET 4 E 7 ASP B 179 ASP B 183 1 N ILE B 182 O GLU B 209 SHEET 5 E 7 ALA B 143 ARG B 147 1 N PHE B 144 O LEU B 181 SHEET 6 E 7 GLY B 110 SER B 117 1 N ALA B 116 O LYS B 145 SHEET 7 E 7 LEU B 310 SER B 313 1 O PHE B 312 N SER B 117 SHEET 1 F 7 ILE B 254 VAL B 255 0 SHEET 2 F 7 ASP B 230 GLY B 233 1 N GLY B 233 O ILE B 254 SHEET 3 F 7 HIS B 207 GLU B 209 1 N PHE B 208 O ASP B 230 SHEET 4 F 7 ASP B 179 ASP B 183 1 N ILE B 182 O GLU B 209 SHEET 5 F 7 ALA B 143 ARG B 147 1 N PHE B 144 O LEU B 181 SHEET 6 F 7 GLY B 110 SER B 117 1 N ALA B 116 O LYS B 145 SHEET 7 F 7 HIS B 338 VAL B 341 -1 O VAL B 341 N GLY B 110 LINK OD2 ASP A 183 MG MG A 368 1555 1555 2.10 LINK OE2 GLU A 209 MG MG A 368 1555 1555 1.87 LINK O THR A 224 MG MG A 369 1555 1555 2.29 LINK O LEU A 227 MG MG A 369 1555 1555 2.32 LINK OE1 GLU A 235 MG MG A 368 1555 1555 2.06 LINK MG MG A 368 O DAL A 370 1555 1555 1.85 LINK MG MG A 368 O HOH A 402 1555 1555 2.17 LINK MG MG A 369 O HOH A 418 1555 1555 2.09 LINK MG MG A 369 O HOH A 419 1555 1555 2.08 LINK MG MG A 369 O HOH A 420 1555 1555 2.03 LINK MG MG A 369 O HOH A 421 1555 1555 2.20 LINK OD2 ASP B 183 MG MG B 368 1555 1555 2.07 LINK OE2 GLU B 209 MG MG B 368 1555 1555 2.02 LINK O THR B 224 MG MG B 369 1555 1555 2.04 LINK O LEU B 227 MG MG B 369 1555 1555 2.05 LINK OE1 GLU B 235 MG MG B 368 1555 1555 2.04 LINK MG MG B 368 O DAL B 370 1555 1555 1.96 LINK MG MG B 368 O HOH B 379 1555 1555 2.10 LINK MG MG B 369 O HOH B 398 1555 1555 2.14 LINK MG MG B 369 O HOH B 406 1555 1555 2.20 LINK MG MG B 369 O HOH B 412 1555 1555 2.03 LINK MG MG B 369 O HOH B 416 1555 1555 2.26 SITE 1 AC1 5 SER A 76 TYR A 77 SER B 76 TYR B 77 SITE 2 AC1 5 HOH B 401 SITE 1 AC2 5 ASP A 183 GLU A 209 GLU A 235 DAL A 370 SITE 2 AC2 5 HOH A 402 SITE 1 AC3 6 THR A 224 LEU A 227 HOH A 418 HOH A 419 SITE 2 AC3 6 HOH A 420 HOH A 421 SITE 1 AC4 14 MET A 119 LYS A 145 ARG A 147 ASP A 183 SITE 2 AC4 14 ASN A 185 GLU A 209 GLU A 235 HIS A 285 SITE 3 AC4 14 ALA A 287 GLU A 311 MG A 368 HOH A 402 SITE 4 AC4 14 HOH A 422 HOH A 440 SITE 1 AC5 4 ASP A 12 TYR A 34 HIS A 35 ARG B 45 SITE 1 AC6 5 GLN A 139 TRP A 289 ILE A 314 TYR A 332 SITE 2 AC6 5 HOH A 456 SITE 1 AC7 2 LEU B 240 ARG B 267 SITE 1 AC8 5 ASP B 183 GLU B 209 GLU B 235 DAL B 370 SITE 2 AC8 5 HOH B 379 SITE 1 AC9 6 THR B 224 LEU B 227 HOH B 398 HOH B 406 SITE 2 AC9 6 HOH B 412 HOH B 416 SITE 1 BC1 14 MET B 119 LYS B 145 ARG B 147 ASP B 183 SITE 2 BC1 14 ASN B 185 GLU B 209 GLU B 235 HIS B 285 SITE 3 BC1 14 ALA B 287 GLU B 311 MG B 368 HOH B 379 SITE 4 BC1 14 HOH B 424 HOH B 457 SITE 1 BC2 5 ARG A 45 ASP B 12 TYR B 34 HIS B 35 SITE 2 BC2 5 HOH B 512 SITE 1 BC3 5 LEU B 135 TRP B 289 ILE B 314 TYR B 332 SITE 2 BC3 5 HOH B 494 CRYST1 182.492 64.745 76.449 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005480 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015445 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013081 0.00000