HEADER DNA BINDING PROTEIN 15-AUG-11 3TEK TITLE THERMODBP: A NON-CANONICAL SINGLE-STRANDED DNA BINDING PROTEIN WITH A TITLE 2 NOVEL STRUCTURE AND MECHANISM COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMODBP-SINGLE STRANDED DNA BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPROTEUS TENAX; SOURCE 3 ORGANISM_TAXID: 2271; SOURCE 4 GENE: TTX1576; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO KEYWDS LEUCINE ZIPPER, SINGLE STRANDED DNA BINDING, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.F.WHITE,S.PAYTUBI,H.LIU,S.GRAHAM,S.A.MCMAHON,J.H.NAISMITH REVDAT 4 28-FEB-24 3TEK 1 REMARK REVDAT 3 29-FEB-12 3TEK 1 JRNL REVDAT 2 14-DEC-11 3TEK 1 JRNL REVDAT 1 23-NOV-11 3TEK 0 JRNL AUTH S.PAYTUBI,S.A.MCMAHON,S.GRAHAM,H.LIU,C.H.BOTTING, JRNL AUTH 2 K.S.MAKAROVA,E.V.KOONIN,J.H.NAISMITH,M.F.WHITE JRNL TITL DISPLACEMENT OF THE CANONICAL SINGLE-STRANDED DNA-BINDING JRNL TITL 2 PROTEIN IN THE THERMOPROTEALES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 E398 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22106294 JRNL DOI 10.1073/PNAS.1113277108 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0111 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 16635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 911 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 676 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 50.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2930 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2302 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.04000 REMARK 3 B22 (A**2) : 1.32000 REMARK 3 B33 (A**2) : 2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.202 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.050 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2343 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1748 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3144 ; 1.376 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4166 ; 1.064 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 6.292 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;30.851 ;22.258 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;14.821 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;15.321 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 318 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2602 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 560 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 28 REMARK 3 ORIGIN FOR THE GROUP (A): -9.8720 -7.4410 -24.9160 REMARK 3 T TENSOR REMARK 3 T11: 0.4699 T22: 0.4562 REMARK 3 T33: 0.3394 T12: -0.0475 REMARK 3 T13: -0.0087 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.8069 L22: 9.7857 REMARK 3 L33: 1.4559 L12: -3.0964 REMARK 3 L13: 1.5166 L23: -3.2174 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: 0.0319 S13: 0.0866 REMARK 3 S21: 0.0390 S22: 0.0585 S23: 0.0334 REMARK 3 S31: 0.0780 S32: -0.1629 S33: -0.0604 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 29 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): 1.2540 -20.4760 -10.1220 REMARK 3 T TENSOR REMARK 3 T11: 0.5303 T22: 0.3950 REMARK 3 T33: 0.3033 T12: 0.0672 REMARK 3 T13: -0.0128 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 3.4857 L22: 3.6092 REMARK 3 L33: 3.2949 L12: -1.1834 REMARK 3 L13: 2.6098 L23: -2.5235 REMARK 3 S TENSOR REMARK 3 S11: 0.1231 S12: -0.0877 S13: -0.0058 REMARK 3 S21: -0.3016 S22: -0.1096 S23: 0.0491 REMARK 3 S31: 0.2962 S32: 0.1389 S33: -0.0135 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): 14.4210 -20.5060 -9.8520 REMARK 3 T TENSOR REMARK 3 T11: 0.5169 T22: 0.6496 REMARK 3 T33: 0.3224 T12: 0.0144 REMARK 3 T13: -0.0242 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 2.7868 L22: 35.8968 REMARK 3 L33: 3.1212 L12: -9.9781 REMARK 3 L13: 2.9440 L23: -10.5840 REMARK 3 S TENSOR REMARK 3 S11: -0.0386 S12: 0.0823 S13: 0.0770 REMARK 3 S21: 0.0522 S22: -0.1110 S23: -0.3194 REMARK 3 S31: -0.0273 S32: 0.0567 S33: 0.1496 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 64 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2690 -16.0330 -19.2600 REMARK 3 T TENSOR REMARK 3 T11: 0.5204 T22: 0.3854 REMARK 3 T33: 0.3487 T12: 0.0182 REMARK 3 T13: -0.0172 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 4.7745 L22: 0.2054 REMARK 3 L33: 5.7438 L12: 0.2054 REMARK 3 L13: 4.1615 L23: -0.4569 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.0378 S13: -0.2744 REMARK 3 S21: -0.1011 S22: 0.0119 S23: -0.1093 REMARK 3 S31: 0.2922 S32: 0.0440 S33: -0.0295 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): -2.0740 -14.1120 -32.4210 REMARK 3 T TENSOR REMARK 3 T11: 0.5363 T22: 0.4289 REMARK 3 T33: 0.2770 T12: 0.0052 REMARK 3 T13: -0.0357 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 8.0433 L22: 6.2258 REMARK 3 L33: 1.7630 L12: 3.7769 REMARK 3 L13: -2.4480 L23: -0.6279 REMARK 3 S TENSOR REMARK 3 S11: 0.2037 S12: 0.3218 S13: -0.0536 REMARK 3 S21: -0.0960 S22: -0.0296 S23: -0.0772 REMARK 3 S31: 0.3073 S32: 0.0055 S33: -0.1741 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 76 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1600 -6.3820 -24.1360 REMARK 3 T TENSOR REMARK 3 T11: 0.5079 T22: 0.4089 REMARK 3 T33: 0.3329 T12: 0.0037 REMARK 3 T13: -0.0178 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 1.6242 L22: 1.1540 REMARK 3 L33: 3.0707 L12: 1.0057 REMARK 3 L13: 0.8597 L23: 1.3219 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: 0.0168 S13: -0.1035 REMARK 3 S21: -0.0368 S22: 0.0212 S23: -0.0778 REMARK 3 S31: -0.0534 S32: 0.2490 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5120 -9.8330 -5.7970 REMARK 3 T TENSOR REMARK 3 T11: 0.5134 T22: 0.4395 REMARK 3 T33: 0.3184 T12: -0.0514 REMARK 3 T13: -0.0529 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.5443 L22: 0.6771 REMARK 3 L33: 5.2259 L12: -0.1347 REMARK 3 L13: -2.4384 L23: -0.7430 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.0550 S13: 0.0243 REMARK 3 S21: 0.0856 S22: -0.0367 S23: -0.0597 REMARK 3 S31: -0.0773 S32: 0.1456 S33: 0.0390 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): -0.0180 -19.1430 1.6210 REMARK 3 T TENSOR REMARK 3 T11: 0.5305 T22: 0.4457 REMARK 3 T33: 0.2995 T12: -0.0236 REMARK 3 T13: 0.0117 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 2.6288 L22: 2.3352 REMARK 3 L33: 1.3930 L12: -0.5316 REMARK 3 L13: 1.7542 L23: -0.1944 REMARK 3 S TENSOR REMARK 3 S11: 0.0671 S12: -0.0336 S13: -0.2108 REMARK 3 S21: 0.1575 S22: 0.0813 S23: 0.3102 REMARK 3 S31: -0.0338 S32: 0.2749 S33: -0.1484 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 134 REMARK 3 ORIGIN FOR THE GROUP (A): -3.0490 -5.9490 -18.8920 REMARK 3 T TENSOR REMARK 3 T11: 0.4984 T22: 0.4032 REMARK 3 T33: 0.3706 T12: -0.0078 REMARK 3 T13: -0.0236 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.8885 L22: 1.9055 REMARK 3 L33: 5.8171 L12: 0.8927 REMARK 3 L13: -2.2493 L23: -2.1323 REMARK 3 S TENSOR REMARK 3 S11: 0.1212 S12: 0.0170 S13: 0.0773 REMARK 3 S21: 0.0849 S22: 0.1132 S23: 0.0399 REMARK 3 S31: -0.0861 S32: 0.0345 S33: -0.2343 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 135 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): -5.3690 -20.8320 0.1130 REMARK 3 T TENSOR REMARK 3 T11: 0.5271 T22: 0.3745 REMARK 3 T33: 0.4051 T12: 0.0291 REMARK 3 T13: 0.0542 T23: 0.0768 REMARK 3 L TENSOR REMARK 3 L11: 1.4145 L22: 11.0823 REMARK 3 L33: 2.5903 L12: -3.9548 REMARK 3 L13: 1.9111 L23: -5.3461 REMARK 3 S TENSOR REMARK 3 S11: -0.1344 S12: -0.1220 S13: -0.0926 REMARK 3 S21: 0.3767 S22: 0.3023 S23: 0.3429 REMARK 3 S31: -0.1920 S32: -0.2103 S33: -0.1679 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 15 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0900 15.7070 -14.0280 REMARK 3 T TENSOR REMARK 3 T11: 0.5889 T22: 0.4375 REMARK 3 T33: 0.8697 T12: -0.1180 REMARK 3 T13: -0.0785 T23: -0.4614 REMARK 3 L TENSOR REMARK 3 L11: 13.6371 L22: 11.5902 REMARK 3 L33: 21.1807 L12: 12.5313 REMARK 3 L13: 16.9841 L23: 15.6153 REMARK 3 S TENSOR REMARK 3 S11: -0.7317 S12: -0.1210 S13: -0.9330 REMARK 3 S21: -1.5662 S22: 0.9253 S23: -0.9999 REMARK 3 S31: -2.0833 S32: -0.1632 S33: -0.1936 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 16 B 30 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9070 0.0370 -19.5180 REMARK 3 T TENSOR REMARK 3 T11: 0.5046 T22: 0.4559 REMARK 3 T33: 0.3276 T12: -0.0241 REMARK 3 T13: -0.0211 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.5863 L22: 2.7407 REMARK 3 L33: 1.6711 L12: 0.4481 REMARK 3 L13: -0.0445 L23: 2.0587 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: 0.1287 S13: 0.0151 REMARK 3 S21: 0.0040 S22: -0.0210 S23: -0.0798 REMARK 3 S31: 0.0071 S32: -0.1378 S33: 0.0094 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 31 B 41 REMARK 3 ORIGIN FOR THE GROUP (A): -8.8180 15.1160 -0.4490 REMARK 3 T TENSOR REMARK 3 T11: 0.4758 T22: 0.3656 REMARK 3 T33: 0.4561 T12: -0.0331 REMARK 3 T13: -0.0243 T23: -0.0974 REMARK 3 L TENSOR REMARK 3 L11: 4.0116 L22: 1.9821 REMARK 3 L33: 0.9647 L12: 2.2754 REMARK 3 L13: -0.5863 L23: 0.4299 REMARK 3 S TENSOR REMARK 3 S11: -0.0870 S12: -0.2107 S13: 0.5314 REMARK 3 S21: 0.0543 S22: -0.0506 S23: 0.3855 REMARK 3 S31: 0.1385 S32: 0.1085 S33: 0.1376 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 42 B 50 REMARK 3 ORIGIN FOR THE GROUP (A): -15.5050 13.5570 8.0810 REMARK 3 T TENSOR REMARK 3 T11: 0.5858 T22: 0.9046 REMARK 3 T33: 0.3981 T12: 0.1027 REMARK 3 T13: -0.0693 T23: -0.2819 REMARK 3 L TENSOR REMARK 3 L11: 9.1366 L22: 30.7365 REMARK 3 L33: 2.5862 L12: 14.0149 REMARK 3 L13: 1.7967 L23: 7.2923 REMARK 3 S TENSOR REMARK 3 S11: 0.0822 S12: -1.4585 S13: 1.4752 REMARK 3 S21: 1.1415 S22: -0.0792 S23: 1.5352 REMARK 3 S31: 0.6009 S32: 0.7184 S33: -0.0029 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 51 B 63 REMARK 3 ORIGIN FOR THE GROUP (A): -18.6120 9.3210 -4.5730 REMARK 3 T TENSOR REMARK 3 T11: 0.5389 T22: 0.3963 REMARK 3 T33: 0.3430 T12: 0.0027 REMARK 3 T13: -0.0034 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 3.6273 L22: 0.3925 REMARK 3 L33: 9.9678 L12: 0.0916 REMARK 3 L13: 4.3066 L23: -1.2549 REMARK 3 S TENSOR REMARK 3 S11: -0.0540 S12: -0.1390 S13: 0.1140 REMARK 3 S21: 0.0517 S22: 0.0448 S23: 0.0594 REMARK 3 S31: -0.4392 S32: -0.2142 S33: 0.0092 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 64 B 77 REMARK 3 ORIGIN FOR THE GROUP (A): -27.5570 6.6560 -15.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.5057 T22: 0.4135 REMARK 3 T33: 0.3621 T12: 0.0179 REMARK 3 T13: -0.0153 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.8601 L22: 0.9560 REMARK 3 L33: 2.1995 L12: 1.2810 REMARK 3 L13: -0.9765 L23: -1.3139 REMARK 3 S TENSOR REMARK 3 S11: -0.0511 S12: 0.1374 S13: 0.3302 REMARK 3 S21: 0.0701 S22: 0.0381 S23: 0.0549 REMARK 3 S31: -0.1174 S32: -0.2327 S33: 0.0130 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 78 B 85 REMARK 3 ORIGIN FOR THE GROUP (A): -25.6950 -1.5160 -5.5940 REMARK 3 T TENSOR REMARK 3 T11: 0.4821 T22: 0.4081 REMARK 3 T33: 0.3420 T12: -0.0257 REMARK 3 T13: -0.0008 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 2.5816 L22: 6.3807 REMARK 3 L33: 7.1787 L12: -4.0050 REMARK 3 L13: 1.4572 L23: -1.8683 REMARK 3 S TENSOR REMARK 3 S11: -0.1147 S12: -0.1863 S13: -0.0277 REMARK 3 S21: 0.2390 S22: 0.1745 S23: 0.1596 REMARK 3 S31: -0.1093 S32: -0.1742 S33: -0.0598 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 86 B 108 REMARK 3 ORIGIN FOR THE GROUP (A): -6.2640 3.2330 0.3220 REMARK 3 T TENSOR REMARK 3 T11: 0.4983 T22: 0.4439 REMARK 3 T33: 0.3124 T12: -0.0331 REMARK 3 T13: -0.0444 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 6.0359 L22: 1.9206 REMARK 3 L33: 0.2339 L12: 2.9859 REMARK 3 L13: -0.2703 L23: 0.1794 REMARK 3 S TENSOR REMARK 3 S11: 0.1401 S12: -0.0863 S13: -0.0707 REMARK 3 S21: 0.1248 S22: -0.0678 S23: -0.1268 REMARK 3 S31: 0.0337 S32: -0.0269 S33: -0.0722 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 109 B 126 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0480 9.8860 -3.7810 REMARK 3 T TENSOR REMARK 3 T11: 0.5045 T22: 0.4057 REMARK 3 T33: 0.3541 T12: -0.0288 REMARK 3 T13: -0.0194 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.6672 L22: 0.6932 REMARK 3 L33: 1.3869 L12: 0.9883 REMARK 3 L13: 0.9841 L23: 0.5829 REMARK 3 S TENSOR REMARK 3 S11: -0.0190 S12: -0.1325 S13: -0.1034 REMARK 3 S21: -0.1623 S22: 0.0661 S23: -0.1322 REMARK 3 S31: -0.2225 S32: -0.0843 S33: -0.0470 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 127 B 143 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0980 4.1220 -8.8150 REMARK 3 T TENSOR REMARK 3 T11: 0.5192 T22: 0.3762 REMARK 3 T33: 0.3748 T12: -0.0165 REMARK 3 T13: -0.0035 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.7100 L22: 0.8124 REMARK 3 L33: 0.7739 L12: 0.1993 REMARK 3 L13: 0.5066 L23: 0.6989 REMARK 3 S TENSOR REMARK 3 S11: 0.0150 S12: -0.1197 S13: -0.0366 REMARK 3 S21: -0.1024 S22: 0.0951 S23: -0.0935 REMARK 3 S31: -0.0522 S32: -0.0098 S33: -0.1100 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3TEK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.917 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19149 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 103.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX C/D/E REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11.8 % ISOPROPANOL, 0.1 M SODIUM REMARK 280 CITRATE, 0.2 M LITHIUM SULPHATE, PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.82750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 LEU A 5 REMARK 465 ARG A 6 REMARK 465 GLU A 7 REMARK 465 GLU A 8 REMARK 465 GLU A 9 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 LEU B 5 REMARK 465 ARG B 6 REMARK 465 GLU B 7 REMARK 465 GLU B 8 REMARK 465 GLU B 9 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 135 CD NE CZ NH1 NH2 REMARK 480 ARG B 135 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 135 O HOH A 186 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 46 130.35 -36.44 REMARK 500 PRO B 46 130.08 -36.43 REMARK 500 REMARK 500 REMARK: NULL DBREF 3TEK A 1 148 PDB 3TEK 3TEK 1 148 DBREF 3TEK B 1 148 PDB 3TEK 3TEK 1 148 SEQRES 1 A 148 MET GLY GLU GLU LEU ARG GLU GLU GLU ARG GLY GLU VAL SEQRES 2 A 148 ARG SER GLU LEU ILE THR LYS GLY GLU LYS LYS LEU VAL SEQRES 3 A 148 LEU ILE ARG TRP ASN THR GLY LYS THR SER ALA GLY ARG SEQRES 4 A 148 LEU PHE GLY ARG TYR GLY PRO GLY GLY ARG PRO GLU PHE SEQRES 5 A 148 PHE LYS LEU LEU PHE GLY ALA VAL ALA GLY SER LEU ARG SEQRES 6 A 148 GLU GLN PHE GLY PRO ASP GLY GLU ASN ILE PHE ASN ARG SEQRES 7 A 148 ILE ARG ASP SER GLU LYS PHE ARG GLU THR SER ARG GLU SEQRES 8 A 148 LEU PHE ASP GLY LEU LYS LYS TRP PHE PHE GLU GLU ALA SEQRES 9 A 148 VAL PRO ARG TYR ASN LEU GLU ARG GLY ASP ILE PHE MET SEQRES 10 A 148 ILE SER THR GLU LEU VAL LEU ASP PRO ASP THR GLY GLU SEQRES 11 A 148 LEU LEU TRP ASN ARG ASP LYS THR GLN LEU ILE TYR TRP SEQRES 12 A 148 ILE ARG SER ASP ARG SEQRES 1 B 148 MET GLY GLU GLU LEU ARG GLU GLU GLU ARG GLY GLU VAL SEQRES 2 B 148 ARG SER GLU LEU ILE THR LYS GLY GLU LYS LYS LEU VAL SEQRES 3 B 148 LEU ILE ARG TRP ASN THR GLY LYS THR SER ALA GLY ARG SEQRES 4 B 148 LEU PHE GLY ARG TYR GLY PRO GLY GLY ARG PRO GLU PHE SEQRES 5 B 148 PHE LYS LEU LEU PHE GLY ALA VAL ALA GLY SER LEU ARG SEQRES 6 B 148 GLU GLN PHE GLY PRO ASP GLY GLU ASN ILE PHE ASN ARG SEQRES 7 B 148 ILE ARG ASP SER GLU LYS PHE ARG GLU THR SER ARG GLU SEQRES 8 B 148 LEU PHE ASP GLY LEU LYS LYS TRP PHE PHE GLU GLU ALA SEQRES 9 B 148 VAL PRO ARG TYR ASN LEU GLU ARG GLY ASP ILE PHE MET SEQRES 10 B 148 ILE SER THR GLU LEU VAL LEU ASP PRO ASP THR GLY GLU SEQRES 11 B 148 LEU LEU TRP ASN ARG ASP LYS THR GLN LEU ILE TYR TRP SEQRES 12 B 148 ILE ARG SER ASP ARG FORMUL 3 HOH *93(H2 O) HELIX 1 1 SER A 36 GLY A 42 1 7 HELIX 2 2 GLU A 51 GLY A 69 1 19 HELIX 3 3 PRO A 70 ARG A 80 1 11 HELIX 4 4 SER A 82 GLU A 103 1 22 HELIX 5 5 GLU A 103 ASN A 109 1 7 HELIX 6 6 SER B 36 GLY B 42 1 7 HELIX 7 7 GLU B 51 GLY B 69 1 19 HELIX 8 8 PRO B 70 ARG B 80 1 11 HELIX 9 9 SER B 82 GLU B 103 1 22 HELIX 10 10 GLU B 103 ASN B 109 1 7 SHEET 1 A 4 VAL A 13 LYS A 20 0 SHEET 2 A 4 LYS A 23 ASN A 31 -1 O ARG A 29 N ARG A 14 SHEET 3 A 4 PHE A 116 LEU A 124 -1 O LEU A 122 N ILE A 28 SHEET 4 A 4 LEU A 131 TYR A 142 -1 O GLN A 139 N SER A 119 SHEET 1 B 4 VAL B 13 LYS B 20 0 SHEET 2 B 4 LYS B 23 ASN B 31 -1 O ARG B 29 N ARG B 14 SHEET 3 B 4 PHE B 116 LEU B 124 -1 O LEU B 122 N ILE B 28 SHEET 4 B 4 LEU B 131 TYR B 142 -1 O GLN B 139 N SER B 119 CRYST1 39.809 103.655 39.829 90.00 118.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025120 0.000000 0.013354 0.00000 SCALE2 0.000000 0.009647 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028435 0.00000