HEADER PROTEIN BINDING 18-AUG-11 3THG TITLE CRYSTAL STRUCTURE OF THE CREOSOTE RUBISCO ACTIVASE C-DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE 1, COMPND 3 CHLOROPLASTIC; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 308-409; COMPND 6 SYNONYM: RA 1, RUBISCO ACTIVASE 1, RUBISCO ACTIVASE ALPHA FORM; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LARREA TRIDENTATA; SOURCE 3 ORGANISM_COMMON: CREOSOTE BUSH; SOURCE 4 ORGANISM_TAXID: 66636; SOURCE 5 GENE: RCA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21*(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151-DTOPO KEYWDS FOUR-HELIX BUNDLE, RUBISCO REACTIVATION, CHLOROPLAST STROMA, AAA+, KEYWDS 2 ATPASE, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.N.HENDERSON,A.M.KURIATA,R.FROMME,M.E.SALVUCCI,R.M.WACHTER REVDAT 3 28-FEB-24 3THG 1 REMARK SEQADV REVDAT 2 21-MAR-12 3THG 1 JRNL REVDAT 1 31-AUG-11 3THG 0 JRNL AUTH J.N.HENDERSON,A.M.KURIATA,R.FROMME,M.E.SALVUCCI,R.M.WACHTER JRNL TITL ATOMIC RESOLUTION X-RAY STRUCTURE OF THE SUBSTRATE JRNL TITL 2 RECOGNITION DOMAIN OF HIGHER PLANT RIBULOSE-BISPHOSPHATE JRNL TITL 3 CARBOXYLASE/OXYGENASE (RUBISCO) ACTIVASE. JRNL REF J.BIOL.CHEM. V. 286 35683 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21880724 JRNL DOI 10.1074/JBC.C111.289595 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 11875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 606 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 812 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.3700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 780 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.80000 REMARK 3 B22 (A**2) : 0.80000 REMARK 3 B33 (A**2) : -1.20000 REMARK 3 B12 (A**2) : 0.40000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.204 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 766 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 552 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1037 ; 1.742 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1318 ; 0.993 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 102 ; 5.692 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 32 ;34.008 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 123 ;14.419 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;12.394 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 116 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 867 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 158 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 494 ; 1.708 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 207 ; 0.569 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 791 ; 2.649 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 272 ; 3.813 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 244 ; 5.736 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 248 A 346 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7320 28.3070 88.6630 REMARK 3 T TENSOR REMARK 3 T11: 0.2053 T22: 0.2152 REMARK 3 T33: 0.2706 T12: -0.0242 REMARK 3 T13: -0.0329 T23: -0.0612 REMARK 3 L TENSOR REMARK 3 L11: 5.8976 L22: 3.6919 REMARK 3 L33: 5.4710 L12: 3.5577 REMARK 3 L13: 3.9680 L23: 3.1960 REMARK 3 S TENSOR REMARK 3 S11: 0.0898 S12: 0.6206 S13: -0.4375 REMARK 3 S21: -0.2914 S22: 0.2974 S23: -0.3022 REMARK 3 S31: 0.3950 S32: 0.2643 S33: -0.3872 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3THG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067482. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-11; NULL; NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL; NULL; NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N; N; N REMARK 200 RADIATION SOURCE : APS; NULL; NULL; NULL REMARK 200 BEAMLINE : 19-ID; NULL; NULL; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL; NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921; NULL; NULL; NULL REMARK 200 MONOCHROMATOR : NULL; NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD; CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; NULL; NULL; REMARK 200 NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12496 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 48.135 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.53600 REMARK 200 R SYM FOR SHELL (I) : 0.53600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL; NULL; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, 0.2 M TRIMETHYLAMINE N REMARK 280 -OXIDE, 20% PEG MME 2000, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 35.95950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 20.76123 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 50.56600 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 35.95950 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 20.76123 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 50.56600 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 35.95950 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 20.76123 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.56600 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 35.95950 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 20.76123 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 50.56600 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 35.95950 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 20.76123 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 50.56600 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 35.95950 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 20.76123 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 50.56600 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 41.52245 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 101.13200 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 41.52245 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 101.13200 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 41.52245 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 101.13200 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 41.52245 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 101.13200 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 41.52245 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 101.13200 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 41.52245 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 101.13200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 35.95950 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 20.76123 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 202.26400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 245 REMARK 465 ILE A 246 REMARK 465 ASP A 247 REMARK 465 GLU A 347 REMARK 465 ASN A 348 REMARK 465 VAL A 349 REMARK 465 LYS A 350 REMARK 465 ARG A 351 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 PHE A 249 CD1 CD2 CE1 CE2 CZ REMARK 480 GLU A 252 CD OE1 OE2 REMARK 480 ASP A 253 CB CG OD1 OD2 REMARK 480 VAL A 257 CG1 CG2 REMARK 480 LYS A 259 NZ REMARK 480 ASN A 266 CG OD1 ND2 REMARK 480 ASP A 270 CG OD1 OD2 REMARK 480 ILE A 284 CG1 CG2 CD1 REMARK 480 ASP A 285 CG OD1 OD2 REMARK 480 LYS A 301 CD CE NZ REMARK 480 LYS A 314 CE NZ REMARK 480 LYS A 319 CE NZ REMARK 480 GLU A 326 CG CD OE1 OE2 REMARK 480 LYS A 329 CG CD CE NZ REMARK 480 GLU A 345 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 249 CG PHE A 249 CD1 -0.141 REMARK 500 ASP A 253 CA ASP A 253 CB -0.181 REMARK 500 ASN A 266 CB ASN A 266 CG -0.273 REMARK 500 ILE A 284 CB ILE A 284 CG1 -0.192 REMARK 500 GLU A 345 CB GLU A 345 CG -0.229 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 249 CB - CG - CD2 ANGL. DEV. = -8.2 DEGREES REMARK 500 PHE A 249 CD1 - CG - CD2 ANGL. DEV. = 9.8 DEGREES REMARK 500 PHE A 249 CG - CD2 - CE2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASN A 266 CB - CG - OD1 ANGL. DEV. = -13.2 DEGREES REMARK 500 LYS A 301 CG - CD - CE ANGL. DEV. = 19.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 266 46.49 -108.65 REMARK 500 ASN A 317 49.35 36.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLU A 252 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE DEPOSITED SEQUENCE UNP Q7X9A0 REMARK 999 IS WRONG AT THE POSITION H354 DBREF 3THG A 250 351 UNP Q7X9A0 RCA1_LARTR 308 409 SEQADV 3THG GLY A 245 UNP Q7X9A0 EXPRESSION TAG SEQADV 3THG ILE A 246 UNP Q7X9A0 EXPRESSION TAG SEQADV 3THG ASP A 247 UNP Q7X9A0 EXPRESSION TAG SEQADV 3THG PRO A 248 UNP Q7X9A0 EXPRESSION TAG SEQADV 3THG PHE A 249 UNP Q7X9A0 EXPRESSION TAG SEQADV 3THG ASP A 296 UNP Q7X9A0 HIS 354 SEE REMARK 999 SEQRES 1 A 107 GLY ILE ASP PRO PHE THR ARG GLU ASP ARG ILE GLY VAL SEQRES 2 A 107 CYS LYS GLY ILE PHE ARG THR ASP ASN VAL ALA ASP ASP SEQRES 3 A 107 ASP ILE VAL LYS LEU VAL ASP THR PHE PRO GLY GLN SER SEQRES 4 A 107 ILE ASP PHE PHE GLY ALA LEU ARG ALA ARG VAL TYR ASP SEQRES 5 A 107 ASP GLU VAL ARG LYS TRP VAL SER GLU VAL GLY VAL ASP SEQRES 6 A 107 THR ILE GLY LYS LYS LEU VAL ASN SER LYS GLU GLY PRO SEQRES 7 A 107 PRO SER PHE GLU GLN PRO LYS MET THR ILE ASP LYS LEU SEQRES 8 A 107 LEU GLY TYR GLY GLY MET LEU VAL GLN GLU GLN GLU ASN SEQRES 9 A 107 VAL LYS ARG HET GOL A 1 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *42(H2 O) HELIX 1 1 THR A 250 PHE A 262 1 13 HELIX 2 2 ALA A 268 PHE A 279 1 12 HELIX 3 3 SER A 283 VAL A 316 1 34 HELIX 4 4 THR A 331 GLN A 344 1 14 SITE 1 AC1 7 HOH A 13 HOH A 14 ARG A 293 ASP A 297 SITE 2 AC1 7 ARG A 300 TYR A 338 MET A 341 CRYST1 71.919 71.919 151.698 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013905 0.008028 0.000000 0.00000 SCALE2 0.000000 0.016056 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006592 0.00000