data_3TJQ # _entry.id 3TJQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3TJQ RCSB RCSB067562 WWPDB D_1000067562 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3TJN unspecified . PDB 3TJO unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3TJQ _pdbx_database_status.recvd_initial_deposition_date 2011-08-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eigenbrot, C.' 1 'Ultsch, M.' 2 # _citation.id primary _citation.title 'Structural and Functional Analysis of HtrA1 and Its Subdomains.' _citation.journal_abbrev Structure _citation.journal_volume 20 _citation.page_first 1040 _citation.page_last 1050 _citation.year 2012 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22578544 _citation.pdbx_database_id_DOI 10.1016/j.str.2012.03.021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Eigenbrot, C.' 1 primary 'Ultsch, M.' 2 primary 'Lipari, M.T.' 3 primary 'Moran, P.' 4 primary 'Lin, S.J.' 5 primary 'Ganesan, R.' 6 primary 'Quan, C.' 7 primary 'Tom, J.' 8 primary 'Sandoval, W.' 9 primary 'van Lookeren Campagne, M.' 10 primary 'Kirchhofer, D.' 11 # _cell.entry_id 3TJQ _cell.length_a 72.085 _cell.length_b 72.085 _cell.length_c 41.289 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TJQ _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Serine protease HTRA1' 14651.489 1 3.4.21.- ? 'N-terminal part (UNP residues 36-155)' ? 2 non-polymer syn 'PLATINUM (II) ION' 195.078 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 6 ? ? ? ? 4 non-polymer syn 'THIOCYANATE ION' 58.082 4 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 38 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'High-temperature requirement A serine peptidase 1, L56, Serine protease 11' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AHHHHHHGENLYFQGSAGCPDRCEPARCPPQPEHCEGGRARDACGCCEVCGAPEGAACGLQEGPCGEGLQCVVPFGVPAS ATVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACGNS ; _entity_poly.pdbx_seq_one_letter_code_can ;AHHHHHHGENLYFQGSAGCPDRCEPARCPPQPEHCEGGRARDACGCCEVCGAPEGAACGLQEGPCGEGLQCVVPFGVPAS ATVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACGNS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 GLU n 1 10 ASN n 1 11 LEU n 1 12 TYR n 1 13 PHE n 1 14 GLN n 1 15 GLY n 1 16 SER n 1 17 ALA n 1 18 GLY n 1 19 CYS n 1 20 PRO n 1 21 ASP n 1 22 ARG n 1 23 CYS n 1 24 GLU n 1 25 PRO n 1 26 ALA n 1 27 ARG n 1 28 CYS n 1 29 PRO n 1 30 PRO n 1 31 GLN n 1 32 PRO n 1 33 GLU n 1 34 HIS n 1 35 CYS n 1 36 GLU n 1 37 GLY n 1 38 GLY n 1 39 ARG n 1 40 ALA n 1 41 ARG n 1 42 ASP n 1 43 ALA n 1 44 CYS n 1 45 GLY n 1 46 CYS n 1 47 CYS n 1 48 GLU n 1 49 VAL n 1 50 CYS n 1 51 GLY n 1 52 ALA n 1 53 PRO n 1 54 GLU n 1 55 GLY n 1 56 ALA n 1 57 ALA n 1 58 CYS n 1 59 GLY n 1 60 LEU n 1 61 GLN n 1 62 GLU n 1 63 GLY n 1 64 PRO n 1 65 CYS n 1 66 GLY n 1 67 GLU n 1 68 GLY n 1 69 LEU n 1 70 GLN n 1 71 CYS n 1 72 VAL n 1 73 VAL n 1 74 PRO n 1 75 PHE n 1 76 GLY n 1 77 VAL n 1 78 PRO n 1 79 ALA n 1 80 SER n 1 81 ALA n 1 82 THR n 1 83 VAL n 1 84 ARG n 1 85 ARG n 1 86 ARG n 1 87 ALA n 1 88 GLN n 1 89 ALA n 1 90 GLY n 1 91 LEU n 1 92 CYS n 1 93 VAL n 1 94 CYS n 1 95 ALA n 1 96 SER n 1 97 SER n 1 98 GLU n 1 99 PRO n 1 100 VAL n 1 101 CYS n 1 102 GLY n 1 103 SER n 1 104 ASP n 1 105 ALA n 1 106 ASN n 1 107 THR n 1 108 TYR n 1 109 ALA n 1 110 ASN n 1 111 LEU n 1 112 CYS n 1 113 GLN n 1 114 LEU n 1 115 ARG n 1 116 ALA n 1 117 ALA n 1 118 SER n 1 119 ARG n 1 120 ARG n 1 121 SER n 1 122 GLU n 1 123 ARG n 1 124 LEU n 1 125 HIS n 1 126 ARG n 1 127 PRO n 1 128 PRO n 1 129 VAL n 1 130 ILE n 1 131 VAL n 1 132 LEU n 1 133 GLN n 1 134 ARG n 1 135 GLY n 1 136 ALA n 1 137 CYS n 1 138 GLY n 1 139 ASN n 1 140 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HTRA, HTRA1, PRSS11' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'T. ni' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HTRA1_HUMAN _struct_ref.pdbx_db_accession Q92743 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AAGCPDRCEPARCPPQPEHCEGGRARDACGCCEVCGAPEGAACGLQEGPCGEGLQCVVPFGVPASATVRRRAQAGLCVCA SSEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACG ; _struct_ref.pdbx_align_begin 34 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TJQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92743 _struct_ref_seq.db_align_beg 34 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 156 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 19 _struct_ref_seq.pdbx_auth_seq_align_end 156 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3TJQ HIS A 2 ? UNP Q92743 ? ? 'EXPRESSION TAG' 20 1 1 3TJQ HIS A 3 ? UNP Q92743 ? ? 'EXPRESSION TAG' 21 2 1 3TJQ HIS A 4 ? UNP Q92743 ? ? 'EXPRESSION TAG' 22 3 1 3TJQ HIS A 5 ? UNP Q92743 ? ? 'EXPRESSION TAG' 23 4 1 3TJQ HIS A 6 ? UNP Q92743 ? ? 'EXPRESSION TAG' 24 5 1 3TJQ HIS A 7 ? UNP Q92743 ? ? 'EXPRESSION TAG' 25 6 1 3TJQ GLY A 8 ? UNP Q92743 ? ? 'EXPRESSION TAG' 26 7 1 3TJQ GLU A 9 ? UNP Q92743 ? ? 'EXPRESSION TAG' 27 8 1 3TJQ ASN A 10 ? UNP Q92743 ? ? 'EXPRESSION TAG' 28 9 1 3TJQ LEU A 11 ? UNP Q92743 ? ? 'EXPRESSION TAG' 29 10 1 3TJQ TYR A 12 ? UNP Q92743 ? ? 'EXPRESSION TAG' 30 11 1 3TJQ PHE A 13 ? UNP Q92743 ? ? 'EXPRESSION TAG' 31 12 1 3TJQ GLN A 14 ? UNP Q92743 ? ? 'EXPRESSION TAG' 32 13 1 3TJQ GLY A 15 ? UNP Q92743 ? ? 'EXPRESSION TAG' 33 14 1 3TJQ SER A 16 ? UNP Q92743 ? ? 'EXPRESSION TAG' 34 15 1 3TJQ ASN A 139 ? UNP Q92743 ? ? 'EXPRESSION TAG' 157 16 1 3TJQ SER A 140 ? UNP Q92743 ? ? 'EXPRESSION TAG' 158 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3TJQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details 'potassium thiocyanate, sodium acetate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 300K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-11-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3TJQ _reflns.observed_criterion_sigma_I -2 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 7676 _reflns.number_all 8555 _reflns.percent_possible_obs 90 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.106 _reflns.pdbx_netI_over_sigmaI 19 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3TJQ _refine.ls_number_reflns_obs 7676 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 2.001 _refine.ls_percent_reflns_obs 99.12 _refine.ls_R_factor_obs 0.22212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21677 _refine.ls_R_factor_R_free 0.26960 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 859 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 41.153 _refine.aniso_B[1][1] 1.55 _refine.aniso_B[2][2] 1.55 _refine.aniso_B[3][3] -2.33 _refine.aniso_B[1][2] 0.78 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.184 _refine.overall_SU_ML 0.119 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.584 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 753 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 817 _refine_hist.d_res_high 2.001 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.009 0.021 ? 798 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.233 1.996 ? 1077 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.633 5.000 ? 106 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 29.636 22.353 ? 34 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.157 15.000 ? 114 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16.335 15.000 ? 11 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.072 0.200 ? 110 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.022 ? 626 ? 'X-RAY DIFFRACTION' r_mcbond_it 3.857 2.500 ? 540 ? 'X-RAY DIFFRACTION' r_mcangle_it 5.674 5.000 ? 847 ? 'X-RAY DIFFRACTION' r_scbond_it 4.667 2.500 ? 258 ? 'X-RAY DIFFRACTION' r_scangle_it 6.711 5.000 ? 230 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.001 _refine_ls_shell.d_res_low 2.109 _refine_ls_shell.number_reflns_R_work 1053 _refine_ls_shell.R_factor_R_work 0.265 _refine_ls_shell.percent_reflns_obs 94.71 _refine_ls_shell.R_factor_R_free 0.323 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 111 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3TJQ _struct.title 'N-domain of HtrA1' _struct.pdbx_descriptor 'Serine protease HTRA1 (E.C.3.4.21.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TJQ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text hydrolase # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 5 ? K N N 3 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 24 ? CYS A 28 ? GLU A 42 CYS A 46 5 ? 5 HELX_P HELX_P2 2 ASN A 110 ? LEU A 124 ? ASN A 128 LEU A 142 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 19 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 37 A CYS 62 1_555 ? ? ? ? ? ? ? 2.026 ? disulf2 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 41 A CYS 64 1_555 ? ? ? ? ? ? ? 2.044 ? disulf3 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 46 A CYS 65 1_555 ? ? ? ? ? ? ? 2.043 ? disulf4 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 50 SG ? ? A CYS 53 A CYS 68 1_555 ? ? ? ? ? ? ? 2.050 ? disulf5 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 71 SG ? ? A CYS 76 A CYS 89 1_555 ? ? ? ? ? ? ? 2.040 ? disulf6 disulf ? ? A CYS 65 SG ? ? ? 1_555 A CYS 92 SG ? ? A CYS 83 A CYS 110 1_555 ? ? ? ? ? ? ? 2.047 ? disulf7 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 112 SG ? ? A CYS 112 A CYS 130 1_555 ? ? ? ? ? ? ? 2.026 ? metalc1 metalc ? ? F PT . PT ? ? ? 1_555 O HOH . O ? ? A PT 2 A HOH 177 1_555 ? ? ? ? ? ? ? 2.029 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 39 ? ARG A 41 ? ARG A 57 ARG A 59 A 2 GLU A 48 ? CYS A 50 ? GLU A 66 CYS A 68 B 1 ALA A 57 ? CYS A 58 ? ALA A 75 CYS A 76 B 2 GLY A 90 ? CYS A 94 ? GLY A 108 CYS A 112 B 3 LEU A 69 ? VAL A 72 ? LEU A 87 VAL A 90 C 1 VAL A 100 ? CYS A 101 ? VAL A 118 CYS A 119 C 2 THR A 107 ? TYR A 108 ? THR A 125 TYR A 126 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 40 ? N ALA A 58 O VAL A 49 ? O VAL A 67 B 1 2 N CYS A 58 ? N CYS A 76 O GLY A 90 ? O GLY A 108 B 2 3 O LEU A 91 ? O LEU A 109 N VAL A 72 ? N VAL A 90 C 1 2 N VAL A 100 ? N VAL A 118 O TYR A 108 ? O TYR A 126 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE PT A 1' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CL A 4' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A 5' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 6' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PT A 2' AC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A 7' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 8' AC8 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SCN A 159' AC9 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 160' BC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 161' BC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SCN A 162' BC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SCN A 163' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 CL C . ? CL A 4 . ? 1_555 ? 2 AC1 3 CL D . ? CL A 5 . ? 1_555 ? 3 AC1 3 CL E . ? CL A 6 . ? 1_555 ? 4 AC2 5 PT B . ? PT A 1 . ? 1_555 ? 5 AC2 5 CL D . ? CL A 5 . ? 1_555 ? 6 AC2 5 CL E . ? CL A 6 . ? 1_555 ? 7 AC2 5 PRO A 25 ? PRO A 43 . ? 5_665 ? 8 AC2 5 HOH O . ? HOH A 180 . ? 1_555 ? 9 AC3 3 PT B . ? PT A 1 . ? 1_555 ? 10 AC3 3 CL C . ? CL A 4 . ? 1_555 ? 11 AC3 3 ARG A 22 ? ARG A 40 . ? 5_665 ? 12 AC4 4 PT B . ? PT A 1 . ? 1_555 ? 13 AC4 4 CL C . ? CL A 4 . ? 1_555 ? 14 AC4 4 VAL A 72 ? VAL A 90 . ? 4_556 ? 15 AC4 4 LEU A 91 ? LEU A 109 . ? 4_556 ? 16 AC5 5 CL G . ? CL A 7 . ? 1_555 ? 17 AC5 5 CL H . ? CL A 8 . ? 1_555 ? 18 AC5 5 ARG A 119 ? ARG A 137 . ? 1_555 ? 19 AC5 5 CL K . ? CL A 161 . ? 1_555 ? 20 AC5 5 HOH O . ? HOH A 177 . ? 1_555 ? 21 AC6 3 PT F . ? PT A 2 . ? 1_555 ? 22 AC6 3 CL H . ? CL A 8 . ? 1_555 ? 23 AC6 3 HOH O . ? HOH A 12 . ? 1_555 ? 24 AC7 4 PT F . ? PT A 2 . ? 1_555 ? 25 AC7 4 CL G . ? CL A 7 . ? 1_555 ? 26 AC7 4 PRO A 30 ? PRO A 48 . ? 3_564 ? 27 AC7 4 ARG A 119 ? ARG A 137 . ? 1_555 ? 28 AC8 4 GLU A 33 ? GLU A 51 . ? 3_564 ? 29 AC8 4 SER A 96 ? SER A 114 . ? 1_555 ? 30 AC8 4 CYS A 112 ? CYS A 130 . ? 1_555 ? 31 AC8 4 ARG A 115 ? ARG A 133 . ? 1_555 ? 32 AC9 6 GLU A 36 ? GLU A 54 . ? 1_555 ? 33 AC9 6 ALA A 40 ? ALA A 58 . ? 2_665 ? 34 AC9 6 ARG A 41 ? ARG A 59 . ? 2_665 ? 35 AC9 6 GLY A 51 ? GLY A 69 . ? 1_555 ? 36 AC9 6 GLU A 67 ? GLU A 85 . ? 2_665 ? 37 AC9 6 HOH O . ? HOH A 192 . ? 1_555 ? 38 BC1 4 PT F . ? PT A 2 . ? 1_555 ? 39 BC1 4 CYS A 35 ? CYS A 53 . ? 1_555 ? 40 BC1 4 ARG A 39 ? ARG A 57 . ? 1_555 ? 41 BC1 4 ARG A 119 ? ARG A 137 . ? 1_555 ? 42 BC2 2 GLN A 31 ? GLN A 49 . ? 2_665 ? 43 BC2 2 GLN A 61 ? GLN A 79 . ? 1_555 ? 44 BC3 3 GLU A 54 ? GLU A 72 . ? 1_555 ? 45 BC3 3 ALA A 116 ? ALA A 134 . ? 1_555 ? 46 BC3 3 ARG A 119 ? ARG A 137 . ? 1_555 ? # _database_PDB_matrix.entry_id 3TJQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3TJQ _atom_sites.fract_transf_matrix[1][1] 0.013873 _atom_sites.fract_transf_matrix[1][2] 0.008009 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016019 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024220 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O PT S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 19 ? ? ? A . n A 1 2 HIS 2 20 ? ? ? A . n A 1 3 HIS 3 21 ? ? ? A . n A 1 4 HIS 4 22 ? ? ? A . n A 1 5 HIS 5 23 ? ? ? A . n A 1 6 HIS 6 24 ? ? ? A . n A 1 7 HIS 7 25 ? ? ? A . n A 1 8 GLY 8 26 ? ? ? A . n A 1 9 GLU 9 27 ? ? ? A . n A 1 10 ASN 10 28 ? ? ? A . n A 1 11 LEU 11 29 ? ? ? A . n A 1 12 TYR 12 30 ? ? ? A . n A 1 13 PHE 13 31 ? ? ? A . n A 1 14 GLN 14 32 ? ? ? A . n A 1 15 GLY 15 33 ? ? ? A . n A 1 16 SER 16 34 ? ? ? A . n A 1 17 ALA 17 35 ? ? ? A . n A 1 18 GLY 18 36 36 GLY GLY A . n A 1 19 CYS 19 37 37 CYS CYS A . n A 1 20 PRO 20 38 38 PRO PRO A . n A 1 21 ASP 21 39 39 ASP ASP A . n A 1 22 ARG 22 40 40 ARG ARG A . n A 1 23 CYS 23 41 41 CYS CYS A . n A 1 24 GLU 24 42 42 GLU GLU A . n A 1 25 PRO 25 43 43 PRO PRO A . n A 1 26 ALA 26 44 44 ALA ALA A . n A 1 27 ARG 27 45 45 ARG ARG A . n A 1 28 CYS 28 46 46 CYS CYS A . n A 1 29 PRO 29 47 47 PRO PRO A . n A 1 30 PRO 30 48 48 PRO PRO A . n A 1 31 GLN 31 49 49 GLN GLN A . n A 1 32 PRO 32 50 50 PRO PRO A . n A 1 33 GLU 33 51 51 GLU GLU A . n A 1 34 HIS 34 52 52 HIS HIS A . n A 1 35 CYS 35 53 53 CYS CYS A . n A 1 36 GLU 36 54 54 GLU GLU A . n A 1 37 GLY 37 55 55 GLY GLY A . n A 1 38 GLY 38 56 56 GLY GLY A . n A 1 39 ARG 39 57 57 ARG ARG A . n A 1 40 ALA 40 58 58 ALA ALA A . n A 1 41 ARG 41 59 59 ARG ARG A . n A 1 42 ASP 42 60 60 ASP ASP A . n A 1 43 ALA 43 61 61 ALA ALA A . n A 1 44 CYS 44 62 62 CYS CYS A . n A 1 45 GLY 45 63 63 GLY GLY A . n A 1 46 CYS 46 64 64 CYS CYS A . n A 1 47 CYS 47 65 65 CYS CYS A . n A 1 48 GLU 48 66 66 GLU GLU A . n A 1 49 VAL 49 67 67 VAL VAL A . n A 1 50 CYS 50 68 68 CYS CYS A . n A 1 51 GLY 51 69 69 GLY GLY A . n A 1 52 ALA 52 70 70 ALA ALA A . n A 1 53 PRO 53 71 71 PRO PRO A . n A 1 54 GLU 54 72 72 GLU GLU A . n A 1 55 GLY 55 73 73 GLY GLY A . n A 1 56 ALA 56 74 74 ALA ALA A . n A 1 57 ALA 57 75 75 ALA ALA A . n A 1 58 CYS 58 76 76 CYS CYS A . n A 1 59 GLY 59 77 77 GLY GLY A . n A 1 60 LEU 60 78 78 LEU LEU A . n A 1 61 GLN 61 79 79 GLN GLN A . n A 1 62 GLU 62 80 80 GLU GLU A . n A 1 63 GLY 63 81 81 GLY GLY A . n A 1 64 PRO 64 82 82 PRO PRO A . n A 1 65 CYS 65 83 83 CYS CYS A . n A 1 66 GLY 66 84 84 GLY GLY A . n A 1 67 GLU 67 85 85 GLU GLU A . n A 1 68 GLY 68 86 86 GLY GLY A . n A 1 69 LEU 69 87 87 LEU LEU A . n A 1 70 GLN 70 88 88 GLN GLN A . n A 1 71 CYS 71 89 89 CYS CYS A . n A 1 72 VAL 72 90 90 VAL VAL A . n A 1 73 VAL 73 91 91 VAL VAL A . n A 1 74 PRO 74 92 92 PRO PRO A . n A 1 75 PHE 75 93 93 PHE PHE A . n A 1 76 GLY 76 94 ? ? ? A . n A 1 77 VAL 77 95 ? ? ? A . n A 1 78 PRO 78 96 ? ? ? A . n A 1 79 ALA 79 97 ? ? ? A . n A 1 80 SER 80 98 ? ? ? A . n A 1 81 ALA 81 99 ? ? ? A . n A 1 82 THR 82 100 ? ? ? A . n A 1 83 VAL 83 101 ? ? ? A . n A 1 84 ARG 84 102 ? ? ? A . n A 1 85 ARG 85 103 ? ? ? A . n A 1 86 ARG 86 104 ? ? ? A . n A 1 87 ALA 87 105 ? ? ? A . n A 1 88 GLN 88 106 ? ? ? A . n A 1 89 ALA 89 107 107 ALA ALA A . n A 1 90 GLY 90 108 108 GLY GLY A . n A 1 91 LEU 91 109 109 LEU LEU A . n A 1 92 CYS 92 110 110 CYS CYS A . n A 1 93 VAL 93 111 111 VAL VAL A . n A 1 94 CYS 94 112 112 CYS CYS A . n A 1 95 ALA 95 113 113 ALA ALA A . n A 1 96 SER 96 114 114 SER SER A . n A 1 97 SER 97 115 115 SER SER A . n A 1 98 GLU 98 116 116 GLU GLU A . n A 1 99 PRO 99 117 117 PRO PRO A . n A 1 100 VAL 100 118 118 VAL VAL A . n A 1 101 CYS 101 119 119 CYS CYS A . n A 1 102 GLY 102 120 120 GLY GLY A . n A 1 103 SER 103 121 121 SER SER A . n A 1 104 ASP 104 122 122 ASP ASP A . n A 1 105 ALA 105 123 123 ALA ALA A . n A 1 106 ASN 106 124 124 ASN ASN A . n A 1 107 THR 107 125 125 THR THR A . n A 1 108 TYR 108 126 126 TYR TYR A . n A 1 109 ALA 109 127 127 ALA ALA A . n A 1 110 ASN 110 128 128 ASN ASN A . n A 1 111 LEU 111 129 129 LEU LEU A . n A 1 112 CYS 112 130 130 CYS CYS A . n A 1 113 GLN 113 131 131 GLN GLN A . n A 1 114 LEU 114 132 132 LEU LEU A . n A 1 115 ARG 115 133 133 ARG ARG A . n A 1 116 ALA 116 134 134 ALA ALA A . n A 1 117 ALA 117 135 135 ALA ALA A . n A 1 118 SER 118 136 136 SER SER A . n A 1 119 ARG 119 137 137 ARG ARG A . n A 1 120 ARG 120 138 138 ARG ARG A . n A 1 121 SER 121 139 139 SER SER A . n A 1 122 GLU 122 140 140 GLU GLU A . n A 1 123 ARG 123 141 141 ARG ARG A . n A 1 124 LEU 124 142 142 LEU LEU A . n A 1 125 HIS 125 143 143 HIS HIS A . n A 1 126 ARG 126 144 144 ARG ARG A . n A 1 127 PRO 127 145 145 PRO PRO A . n A 1 128 PRO 128 146 146 PRO PRO A . n A 1 129 VAL 129 147 147 VAL VAL A . n A 1 130 ILE 130 148 148 ILE ILE A . n A 1 131 VAL 131 149 149 VAL VAL A . n A 1 132 LEU 132 150 150 LEU LEU A . n A 1 133 GLN 133 151 151 GLN GLN A . n A 1 134 ARG 134 152 152 ARG ARG A . n A 1 135 GLY 135 153 153 GLY GLY A . n A 1 136 ALA 136 154 154 ALA ALA A . n A 1 137 CYS 137 155 ? ? ? A . n A 1 138 GLY 138 156 ? ? ? A . n A 1 139 ASN 139 157 ? ? ? A . n A 1 140 SER 140 158 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT 1 1 1 PT PT A . C 3 CL 1 4 4 CL CL A . D 3 CL 1 5 5 CL CL A . E 3 CL 1 6 6 CL CL A . F 2 PT 1 2 2 PT PT A . G 3 CL 1 7 7 CL CL A . H 3 CL 1 8 8 CL CL A . I 4 SCN 1 159 51 SCN SCN A . J 5 GOL 1 160 54 GOL GOL A . K 3 CL 1 161 55 CL CL A . L 4 SCN 1 162 52 SCN SCN A . M 4 SCN 1 163 53 SCN SCN A . N 4 SCN 1 164 56 SCN SCN A . O 6 HOH 1 3 3 HOH HOH A . O 6 HOH 2 9 9 HOH HOH A . O 6 HOH 3 10 10 HOH HOH A . O 6 HOH 4 11 11 HOH HOH A . O 6 HOH 5 12 12 HOH HOH A . O 6 HOH 6 15 15 HOH HOH A . O 6 HOH 7 16 16 HOH HOH A . O 6 HOH 8 17 17 HOH HOH A . O 6 HOH 9 18 18 HOH HOH A . O 6 HOH 10 165 1 HOH HOH A . O 6 HOH 11 166 2 HOH HOH A . O 6 HOH 12 167 4 HOH HOH A . O 6 HOH 13 168 5 HOH HOH A . O 6 HOH 14 169 6 HOH HOH A . O 6 HOH 15 170 7 HOH HOH A . O 6 HOH 16 171 8 HOH HOH A . O 6 HOH 17 172 19 HOH HOH A . O 6 HOH 18 173 20 HOH HOH A . O 6 HOH 19 174 21 HOH HOH A . O 6 HOH 20 175 22 HOH HOH A . O 6 HOH 21 176 23 HOH HOH A . O 6 HOH 22 177 24 HOH HOH A . O 6 HOH 23 178 25 HOH HOH A . O 6 HOH 24 179 26 HOH HOH A . O 6 HOH 25 180 27 HOH HOH A . O 6 HOH 26 181 28 HOH HOH A . O 6 HOH 27 182 29 HOH HOH A . O 6 HOH 28 183 30 HOH HOH A . O 6 HOH 29 184 32 HOH HOH A . O 6 HOH 30 185 33 HOH HOH A . O 6 HOH 31 186 34 HOH HOH A . O 6 HOH 32 187 36 HOH HOH A . O 6 HOH 33 188 37 HOH HOH A . O 6 HOH 34 189 38 HOH HOH A . O 6 HOH 35 190 39 HOH HOH A . O 6 HOH 36 191 40 HOH HOH A . O 6 HOH 37 192 41 HOH HOH A . O 6 HOH 38 193 42 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-16 2 'Structure model' 1 1 2012-06-13 3 'Structure model' 1 2 2012-06-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -6.1629 37.0294 19.7618 0.0456 0.0596 0.0236 -0.0302 -0.0054 0.0124 1.8148 1.7482 1.5909 1.1244 1.0484 1.1145 0.1362 -0.2336 -0.0931 0.1364 -0.1386 0.0793 0.0433 0.0195 0.0024 'X-RAY DIFFRACTION' 2 ? refined 10.9153 44.6886 17.2118 0.0914 0.0749 0.0313 -0.0437 0.0041 0.0207 0.6334 1.0813 1.5839 -0.7083 -0.4421 -0.0848 0.0994 -0.0024 0.1153 -0.0625 -0.0775 -0.1719 -0.1623 0.0582 -0.0219 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 36 ? ? A 65 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 66 ? ? A 154 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BOS 'data collection' . ? 1 PHENIX 'model building' . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 64 ? ? -101.98 -73.28 2 1 LEU A 78 ? ? 56.09 -108.45 3 1 ASP A 122 ? ? -78.88 -166.75 4 1 LEU A 142 ? ? -89.46 32.92 5 1 LEU A 142 ? ? -95.32 32.92 6 1 LEU A 150 ? ? -93.29 -61.94 7 1 GLN A 151 ? ? -139.72 -119.70 8 1 ARG A 152 ? ? -150.86 84.71 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 19 ? A ALA 1 2 1 Y 1 A HIS 20 ? A HIS 2 3 1 Y 1 A HIS 21 ? A HIS 3 4 1 Y 1 A HIS 22 ? A HIS 4 5 1 Y 1 A HIS 23 ? A HIS 5 6 1 Y 1 A HIS 24 ? A HIS 6 7 1 Y 1 A HIS 25 ? A HIS 7 8 1 Y 1 A GLY 26 ? A GLY 8 9 1 Y 1 A GLU 27 ? A GLU 9 10 1 Y 1 A ASN 28 ? A ASN 10 11 1 Y 1 A LEU 29 ? A LEU 11 12 1 Y 1 A TYR 30 ? A TYR 12 13 1 Y 1 A PHE 31 ? A PHE 13 14 1 Y 1 A GLN 32 ? A GLN 14 15 1 Y 1 A GLY 33 ? A GLY 15 16 1 Y 1 A SER 34 ? A SER 16 17 1 Y 1 A ALA 35 ? A ALA 17 18 1 Y 1 A GLY 94 ? A GLY 76 19 1 Y 1 A VAL 95 ? A VAL 77 20 1 Y 1 A PRO 96 ? A PRO 78 21 1 Y 1 A ALA 97 ? A ALA 79 22 1 Y 1 A SER 98 ? A SER 80 23 1 Y 1 A ALA 99 ? A ALA 81 24 1 Y 1 A THR 100 ? A THR 82 25 1 Y 1 A VAL 101 ? A VAL 83 26 1 Y 1 A ARG 102 ? A ARG 84 27 1 Y 1 A ARG 103 ? A ARG 85 28 1 Y 1 A ARG 104 ? A ARG 86 29 1 Y 1 A ALA 105 ? A ALA 87 30 1 Y 1 A GLN 106 ? A GLN 88 31 1 Y 1 A CYS 155 ? A CYS 137 32 1 Y 1 A GLY 156 ? A GLY 138 33 1 Y 1 A ASN 157 ? A ASN 139 34 1 Y 1 A SER 158 ? A SER 140 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PLATINUM (II) ION' PT 3 'CHLORIDE ION' CL 4 'THIOCYANATE ION' SCN 5 GLYCEROL GOL 6 water HOH #