HEADER TRANSFERASE 31-AUG-11 3TMQ TITLE CRYSTAL STRUCTURE OF A 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE FROM TITLE 2 BURKHOLDERIA PSEUDOMALLEI IN COMPLEX WITH D-ARABINOSE-5-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 3-DEOXY-D-MANNO-OCTULOSONIC ACID 8-PHOSPHATE SYNTHASE 2, COMPND 5 KDO-8-PHOSPHATE SYNTHASE 2, PHOSPHO-2-DEHYDRO-3-DEOXYOCTONATE COMPND 6 ALDOLASE 2; COMPND 7 EC: 2.5.1.55; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 320372; SOURCE 4 STRAIN: 1710B; SOURCE 5 GENE: KDSA, KDSA2, BURPS1710B_3264; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, ALDOLASE BARREL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 13-SEP-23 3TMQ 1 REMARK SEQADV REVDAT 2 09-OCT-13 3TMQ 1 JRNL REVDAT 1 21-SEP-11 3TMQ 0 JRNL AUTH L.BAUGH,L.A.GALLAGHER,R.PATRAPUVICH,M.C.CLIFTON, JRNL AUTH 2 A.S.GARDBERG,T.E.EDWARDS,B.ARMOUR,D.W.BEGLEY,S.H.DIETERICH, JRNL AUTH 3 D.M.DRANOW,J.ABENDROTH,J.W.FAIRMAN,D.FOX,B.L.STAKER,I.PHAN, JRNL AUTH 4 A.GILLESPIE,R.CHOI,S.NAKAZAWA-HEWITT,M.T.NGUYEN,A.NAPULI, JRNL AUTH 5 L.BARRETT,G.W.BUCHKO,R.STACY,P.J.MYLER,L.J.STEWART,C.MANOIL, JRNL AUTH 6 W.C.VAN VOORHIS JRNL TITL COMBINING FUNCTIONAL AND STRUCTURAL GENOMICS TO SAMPLE THE JRNL TITL 2 ESSENTIAL BURKHOLDERIA STRUCTOME. JRNL REF PLOS ONE V. 8 53851 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23382856 JRNL DOI 10.1371/JOURNAL.PONE.0053851 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 73746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3679 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4663 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 629 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.74000 REMARK 3 B22 (A**2) : 2.19000 REMARK 3 B33 (A**2) : -1.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.165 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.273 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8272 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5487 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11212 ; 1.415 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13452 ; 1.122 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1091 ; 5.918 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 306 ;34.557 ;23.824 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1305 ;11.906 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;18.216 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1325 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9267 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1598 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 280 REMARK 3 ORIGIN FOR THE GROUP (A): 72.9021 68.7977 18.1549 REMARK 3 T TENSOR REMARK 3 T11: 0.0643 T22: 0.0842 REMARK 3 T33: 0.0386 T12: -0.0353 REMARK 3 T13: 0.0038 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 0.4705 L22: 0.3790 REMARK 3 L33: 0.8046 L12: -0.1041 REMARK 3 L13: -0.0865 L23: -0.0627 REMARK 3 S TENSOR REMARK 3 S11: 0.0062 S12: -0.0988 S13: 0.0848 REMARK 3 S21: 0.0501 S22: -0.0001 S23: -0.0022 REMARK 3 S31: -0.1909 S32: 0.0958 S33: -0.0061 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 281 REMARK 3 ORIGIN FOR THE GROUP (A): 71.4399 34.2960 26.0705 REMARK 3 T TENSOR REMARK 3 T11: 0.0390 T22: 0.0955 REMARK 3 T33: 0.0327 T12: 0.0055 REMARK 3 T13: 0.0092 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.6920 L22: 0.6847 REMARK 3 L33: 0.6858 L12: -0.2027 REMARK 3 L13: 0.1258 L23: 0.2870 REMARK 3 S TENSOR REMARK 3 S11: 0.0084 S12: -0.0794 S13: -0.0926 REMARK 3 S21: 0.0629 S22: 0.0202 S23: 0.0284 REMARK 3 S31: 0.1191 S32: 0.0708 S33: -0.0285 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 280 REMARK 3 ORIGIN FOR THE GROUP (A): 74.3823 60.7784 -14.8027 REMARK 3 T TENSOR REMARK 3 T11: 0.0253 T22: 0.0573 REMARK 3 T33: 0.0114 T12: -0.0083 REMARK 3 T13: -0.0015 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.5440 L22: 0.3716 REMARK 3 L33: 0.7642 L12: 0.0806 REMARK 3 L13: -0.0682 L23: -0.0259 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: 0.0435 S13: 0.0350 REMARK 3 S21: -0.0444 S22: 0.0010 S23: 0.0105 REMARK 3 S31: -0.0750 S32: 0.0348 S33: -0.0161 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 281 REMARK 3 ORIGIN FOR THE GROUP (A): 62.7125 28.0962 -7.3370 REMARK 3 T TENSOR REMARK 3 T11: 0.0284 T22: 0.0477 REMARK 3 T33: 0.0855 T12: 0.0034 REMARK 3 T13: -0.0269 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 0.5833 L22: 1.0353 REMARK 3 L33: 0.6250 L12: 0.0920 REMARK 3 L13: 0.2741 L23: -0.3972 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: 0.0130 S13: -0.1087 REMARK 3 S21: -0.0717 S22: 0.0248 S23: 0.0787 REMARK 3 S31: 0.0992 S32: -0.0032 S33: -0.0538 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 3TMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067665. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78647 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 49.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 5.320 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.31 REMARK 200 R MERGE FOR SHELL (I) : 0.55300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3SZ8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: INTERNAL TRACKING NUMBER224822. PACT REMARK 280 SCREEN F5. 0.2M SODIUM NITRATE, 0.1M BIS-TRIS PROPANE, 20% REMARK 280 PEG3350, PROTEIN DROP CONTAINS 10MM D-ARABINOSE-5-PHOSPHATE. REMARK 280 BUPSA.00102A.A1 PS00621 30.3MG/ML., PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.86000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.49000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.49000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.86000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ARG A 281 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 LEU B 208 REMARK 465 GLY B 209 REMARK 465 ASP B 210 REMARK 465 ALA B 211 REMARK 465 SER B 212 REMARK 465 GLY B 213 REMARK 465 GLY B 214 REMARK 465 ARG B 215 REMARK 465 ARG B 216 REMARK 465 ASP B 248 REMARK 465 GLY B 249 REMARK 465 PRO B 250 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 GLY C -1 REMARK 465 ARG C 281 REMARK 465 GLY D -3 REMARK 465 PRO D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 ASP D 206 REMARK 465 PRO D 207 REMARK 465 LEU D 208 REMARK 465 GLY D 209 REMARK 465 ASP D 210 REMARK 465 ALA D 211 REMARK 465 SER D 212 REMARK 465 GLY D 213 REMARK 465 GLY D 214 REMARK 465 ARG D 215 REMARK 465 ARG D 216 REMARK 465 ALA D 245 REMARK 465 ARG D 246 REMARK 465 CYS D 247 REMARK 465 ASP D 248 REMARK 465 GLY D 249 REMARK 465 PRO D 250 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 38 CG CD OE1 OE2 REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 GLU A 98 CG CD OE1 OE2 REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 ASP A 159 CG OD1 OD2 REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 ILE A 280 CG1 CG2 CD1 REMARK 470 SER B 0 OG REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 77 CG CD CE NZ REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 ARG B 85 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 GLU B 98 CG CD OE1 OE2 REMARK 470 GLU B 155 CG CD OE1 OE2 REMARK 470 ASP B 159 CG OD1 OD2 REMARK 470 GLN B 203 CG CD OE1 NE2 REMARK 470 CYS B 204 SG REMARK 470 ASP B 206 CG OD1 OD2 REMARK 470 ARG B 217 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 218 CG CD OE1 NE2 REMARK 470 ARG B 244 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 246 CG CD NE CZ NH1 NH2 REMARK 470 SER B 251 OG REMARK 470 GLU B 279 CG CD OE1 OE2 REMARK 470 ARG B 281 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 81 CG CD OE1 OE2 REMARK 470 ARG C 85 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 98 CG CD OE1 OE2 REMARK 470 LYS C 147 CG CD CE NZ REMARK 470 ASP C 159 CG OD1 OD2 REMARK 470 ARG C 244 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 279 CG CD OE1 OE2 REMARK 470 ILE C 280 CG1 CG2 CD1 REMARK 470 MET D 1 CG SD CE REMARK 470 ARG D 44 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 61 CG CD NE CZ NH1 NH2 REMARK 470 SER D 62 OG REMARK 470 ILE D 64 CG1 CG2 CD1 REMARK 470 HIS D 65 CG ND1 CD2 CE1 NE2 REMARK 470 SER D 66 OG REMARK 470 GLU D 81 CG CD OE1 OE2 REMARK 470 GLU D 96 CG CD OE1 OE2 REMARK 470 GLU D 98 CG CD OE1 OE2 REMARK 470 LYS D 147 CG CD CE NZ REMARK 470 GLU D 155 CG CD OE1 OE2 REMARK 470 ASP D 159 CG OD1 OD2 REMARK 470 ARG D 217 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 243 CG OD1 OD2 REMARK 470 ARG D 244 CG CD NE CZ NH1 NH2 REMARK 470 SER D 251 OG REMARK 470 LEU D 278 CG CD1 CD2 REMARK 470 GLU D 279 CG CD OE1 OE2 REMARK 470 ARG D 281 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 200 CG HIS A 200 CD2 0.058 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 205 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 216 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG C 166 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 205 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 160 74.30 -102.34 REMARK 500 ARG B 160 73.10 -116.67 REMARK 500 ARG C 160 77.48 -109.87 REMARK 500 ARG D 160 71.65 -111.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A5P C 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A5P A 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 284 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 284 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 D 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 284 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 286 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SZ8 RELATED DB: PDB REMARK 900 APO-FORM SAME SPECIES REMARK 900 RELATED ID: 3TML RELATED DB: PDB REMARK 900 APO-FORM BURKHOLDERI CENOCEPACIA REMARK 900 RELATED ID: 3T4C RELATED DB: PDB REMARK 900 APO-FORM BURKHOLDERI AMBIFARIA REMARK 900 RELATED ID: BUPSA.00102.A RELATED DB: TARGETDB DBREF 3TMQ A 1 281 UNP Q3JP68 Q3JP68_BURP1 1 281 DBREF 3TMQ B 1 281 UNP Q3JP68 Q3JP68_BURP1 1 281 DBREF 3TMQ C 1 281 UNP Q3JP68 Q3JP68_BURP1 1 281 DBREF 3TMQ D 1 281 UNP Q3JP68 Q3JP68_BURP1 1 281 SEQADV 3TMQ GLY A -3 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ PRO A -2 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY A -1 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ SER A 0 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY B -3 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ PRO B -2 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY B -1 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ SER B 0 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY C -3 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ PRO C -2 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY C -1 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ SER C 0 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY D -3 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ PRO D -2 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ GLY D -1 UNP Q3JP68 EXPRESSION TAG SEQADV 3TMQ SER D 0 UNP Q3JP68 EXPRESSION TAG SEQRES 1 A 285 GLY PRO GLY SER MET ASN VAL ALA ILE SER PRO GLY VAL SEQRES 2 A 285 THR ALA GLY ASN SER LEU PRO PHE VAL LEU PHE GLY GLY SEQRES 3 A 285 ILE ASN VAL LEU GLU SER LEU ASP PHE THR LEU ASP VAL SEQRES 4 A 285 CYS GLY GLU TYR VAL ALA VAL THR ARG LYS LEU GLY ILE SEQRES 5 A 285 PRO PHE VAL PHE LYS ALA SER PHE ASP LYS ALA ASN ARG SEQRES 6 A 285 SER SER ILE HIS SER TYR ARG GLY VAL GLY LEU ASP GLU SEQRES 7 A 285 GLY LEU LYS ILE PHE ALA GLU VAL LYS ALA ARG PHE GLY SEQRES 8 A 285 VAL PRO VAL ILE THR ASP VAL HIS GLU ALA GLU GLN ALA SEQRES 9 A 285 ALA PRO VAL ALA GLU ILE ALA ASP VAL LEU GLN VAL PRO SEQRES 10 A 285 ALA PHE LEU ALA ARG GLN THR ASP LEU VAL VAL ALA ILE SEQRES 11 A 285 ALA LYS ALA GLY LYS PRO VAL ASN VAL LYS LYS PRO GLN SEQRES 12 A 285 PHE MET SER PRO THR GLN LEU LYS HIS VAL VAL SER LYS SEQRES 13 A 285 CYS GLY GLU VAL GLY ASN ASP ARG VAL MET LEU CYS GLU SEQRES 14 A 285 ARG GLY SER SER PHE GLY TYR ASP ASN LEU VAL VAL ASP SEQRES 15 A 285 MET LEU GLY PHE ARG GLN MET ALA GLU THR THR GLY GLY SEQRES 16 A 285 CYS PRO VAL ILE PHE ASP VAL THR HIS SER LEU GLN CYS SEQRES 17 A 285 ARG ASP PRO LEU GLY ASP ALA SER GLY GLY ARG ARG ARG SEQRES 18 A 285 GLN VAL LEU ASP LEU ALA ARG ALA GLY ILE ALA VAL GLY SEQRES 19 A 285 ILE ALA GLY LEU PHE LEU GLU ALA HIS PRO ASP PRO ASP SEQRES 20 A 285 ARG ALA ARG CYS ASP GLY PRO SER ALA LEU PRO LEU HIS SEQRES 21 A 285 GLN LEU GLU GLY LEU LEU SER GLN MET LYS ALA ILE ASP SEQRES 22 A 285 ASP LEU VAL LYS ARG MET PRO ALA LEU GLU ILE ARG SEQRES 1 B 285 GLY PRO GLY SER MET ASN VAL ALA ILE SER PRO GLY VAL SEQRES 2 B 285 THR ALA GLY ASN SER LEU PRO PHE VAL LEU PHE GLY GLY SEQRES 3 B 285 ILE ASN VAL LEU GLU SER LEU ASP PHE THR LEU ASP VAL SEQRES 4 B 285 CYS GLY GLU TYR VAL ALA VAL THR ARG LYS LEU GLY ILE SEQRES 5 B 285 PRO PHE VAL PHE LYS ALA SER PHE ASP LYS ALA ASN ARG SEQRES 6 B 285 SER SER ILE HIS SER TYR ARG GLY VAL GLY LEU ASP GLU SEQRES 7 B 285 GLY LEU LYS ILE PHE ALA GLU VAL LYS ALA ARG PHE GLY SEQRES 8 B 285 VAL PRO VAL ILE THR ASP VAL HIS GLU ALA GLU GLN ALA SEQRES 9 B 285 ALA PRO VAL ALA GLU ILE ALA ASP VAL LEU GLN VAL PRO SEQRES 10 B 285 ALA PHE LEU ALA ARG GLN THR ASP LEU VAL VAL ALA ILE SEQRES 11 B 285 ALA LYS ALA GLY LYS PRO VAL ASN VAL LYS LYS PRO GLN SEQRES 12 B 285 PHE MET SER PRO THR GLN LEU LYS HIS VAL VAL SER LYS SEQRES 13 B 285 CYS GLY GLU VAL GLY ASN ASP ARG VAL MET LEU CYS GLU SEQRES 14 B 285 ARG GLY SER SER PHE GLY TYR ASP ASN LEU VAL VAL ASP SEQRES 15 B 285 MET LEU GLY PHE ARG GLN MET ALA GLU THR THR GLY GLY SEQRES 16 B 285 CYS PRO VAL ILE PHE ASP VAL THR HIS SER LEU GLN CYS SEQRES 17 B 285 ARG ASP PRO LEU GLY ASP ALA SER GLY GLY ARG ARG ARG SEQRES 18 B 285 GLN VAL LEU ASP LEU ALA ARG ALA GLY ILE ALA VAL GLY SEQRES 19 B 285 ILE ALA GLY LEU PHE LEU GLU ALA HIS PRO ASP PRO ASP SEQRES 20 B 285 ARG ALA ARG CYS ASP GLY PRO SER ALA LEU PRO LEU HIS SEQRES 21 B 285 GLN LEU GLU GLY LEU LEU SER GLN MET LYS ALA ILE ASP SEQRES 22 B 285 ASP LEU VAL LYS ARG MET PRO ALA LEU GLU ILE ARG SEQRES 1 C 285 GLY PRO GLY SER MET ASN VAL ALA ILE SER PRO GLY VAL SEQRES 2 C 285 THR ALA GLY ASN SER LEU PRO PHE VAL LEU PHE GLY GLY SEQRES 3 C 285 ILE ASN VAL LEU GLU SER LEU ASP PHE THR LEU ASP VAL SEQRES 4 C 285 CYS GLY GLU TYR VAL ALA VAL THR ARG LYS LEU GLY ILE SEQRES 5 C 285 PRO PHE VAL PHE LYS ALA SER PHE ASP LYS ALA ASN ARG SEQRES 6 C 285 SER SER ILE HIS SER TYR ARG GLY VAL GLY LEU ASP GLU SEQRES 7 C 285 GLY LEU LYS ILE PHE ALA GLU VAL LYS ALA ARG PHE GLY SEQRES 8 C 285 VAL PRO VAL ILE THR ASP VAL HIS GLU ALA GLU GLN ALA SEQRES 9 C 285 ALA PRO VAL ALA GLU ILE ALA ASP VAL LEU GLN VAL PRO SEQRES 10 C 285 ALA PHE LEU ALA ARG GLN THR ASP LEU VAL VAL ALA ILE SEQRES 11 C 285 ALA LYS ALA GLY LYS PRO VAL ASN VAL LYS LYS PRO GLN SEQRES 12 C 285 PHE MET SER PRO THR GLN LEU LYS HIS VAL VAL SER LYS SEQRES 13 C 285 CYS GLY GLU VAL GLY ASN ASP ARG VAL MET LEU CYS GLU SEQRES 14 C 285 ARG GLY SER SER PHE GLY TYR ASP ASN LEU VAL VAL ASP SEQRES 15 C 285 MET LEU GLY PHE ARG GLN MET ALA GLU THR THR GLY GLY SEQRES 16 C 285 CYS PRO VAL ILE PHE ASP VAL THR HIS SER LEU GLN CYS SEQRES 17 C 285 ARG ASP PRO LEU GLY ASP ALA SER GLY GLY ARG ARG ARG SEQRES 18 C 285 GLN VAL LEU ASP LEU ALA ARG ALA GLY ILE ALA VAL GLY SEQRES 19 C 285 ILE ALA GLY LEU PHE LEU GLU ALA HIS PRO ASP PRO ASP SEQRES 20 C 285 ARG ALA ARG CYS ASP GLY PRO SER ALA LEU PRO LEU HIS SEQRES 21 C 285 GLN LEU GLU GLY LEU LEU SER GLN MET LYS ALA ILE ASP SEQRES 22 C 285 ASP LEU VAL LYS ARG MET PRO ALA LEU GLU ILE ARG SEQRES 1 D 285 GLY PRO GLY SER MET ASN VAL ALA ILE SER PRO GLY VAL SEQRES 2 D 285 THR ALA GLY ASN SER LEU PRO PHE VAL LEU PHE GLY GLY SEQRES 3 D 285 ILE ASN VAL LEU GLU SER LEU ASP PHE THR LEU ASP VAL SEQRES 4 D 285 CYS GLY GLU TYR VAL ALA VAL THR ARG LYS LEU GLY ILE SEQRES 5 D 285 PRO PHE VAL PHE LYS ALA SER PHE ASP LYS ALA ASN ARG SEQRES 6 D 285 SER SER ILE HIS SER TYR ARG GLY VAL GLY LEU ASP GLU SEQRES 7 D 285 GLY LEU LYS ILE PHE ALA GLU VAL LYS ALA ARG PHE GLY SEQRES 8 D 285 VAL PRO VAL ILE THR ASP VAL HIS GLU ALA GLU GLN ALA SEQRES 9 D 285 ALA PRO VAL ALA GLU ILE ALA ASP VAL LEU GLN VAL PRO SEQRES 10 D 285 ALA PHE LEU ALA ARG GLN THR ASP LEU VAL VAL ALA ILE SEQRES 11 D 285 ALA LYS ALA GLY LYS PRO VAL ASN VAL LYS LYS PRO GLN SEQRES 12 D 285 PHE MET SER PRO THR GLN LEU LYS HIS VAL VAL SER LYS SEQRES 13 D 285 CYS GLY GLU VAL GLY ASN ASP ARG VAL MET LEU CYS GLU SEQRES 14 D 285 ARG GLY SER SER PHE GLY TYR ASP ASN LEU VAL VAL ASP SEQRES 15 D 285 MET LEU GLY PHE ARG GLN MET ALA GLU THR THR GLY GLY SEQRES 16 D 285 CYS PRO VAL ILE PHE ASP VAL THR HIS SER LEU GLN CYS SEQRES 17 D 285 ARG ASP PRO LEU GLY ASP ALA SER GLY GLY ARG ARG ARG SEQRES 18 D 285 GLN VAL LEU ASP LEU ALA ARG ALA GLY ILE ALA VAL GLY SEQRES 19 D 285 ILE ALA GLY LEU PHE LEU GLU ALA HIS PRO ASP PRO ASP SEQRES 20 D 285 ARG ALA ARG CYS ASP GLY PRO SER ALA LEU PRO LEU HIS SEQRES 21 D 285 GLN LEU GLU GLY LEU LEU SER GLN MET LYS ALA ILE ASP SEQRES 22 D 285 ASP LEU VAL LYS ARG MET PRO ALA LEU GLU ILE ARG HET A5P A 282 15 HET NO3 A 283 4 HET NO3 A 284 4 HET NO3 A 285 4 HET EDO A 286 4 HET NO3 B 282 4 HET NO3 B 283 4 HET EDO B 284 4 HET EDO B 285 4 HET A5P C 282 15 HET NO3 C 283 4 HET NO3 C 284 4 HET NO3 C 285 4 HET NO3 C 286 4 HET EDO C 287 4 HET NO3 D 282 4 HET EDO D 283 4 HETNAM A5P ARABINOSE-5-PHOSPHATE HETNAM NO3 NITRATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 A5P 2(C5 H13 O8 P) FORMUL 6 NO3 10(N O3 1-) FORMUL 9 EDO 5(C2 H6 O2) FORMUL 22 HOH *629(H2 O) HELIX 1 1 SER A 28 GLY A 47 1 20 HELIX 2 2 GLY A 71 GLY A 87 1 17 HELIX 3 3 GLU A 96 GLU A 98 5 3 HELIX 4 4 GLN A 99 ALA A 107 1 9 HELIX 5 5 PRO A 113 ALA A 117 5 5 HELIX 6 6 GLN A 119 ALA A 129 1 11 HELIX 7 7 SER A 142 THR A 144 5 3 HELIX 8 8 GLN A 145 VAL A 156 1 12 HELIX 9 9 LEU A 180 THR A 188 1 9 HELIX 10 10 VAL A 198 LEU A 202 1 5 HELIX 11 11 ARG A 215 ARG A 217 5 3 HELIX 12 12 GLN A 218 GLY A 230 1 13 HELIX 13 13 ASP A 241 ALA A 245 5 5 HELIX 14 14 ASP A 248 ALA A 252 5 5 HELIX 15 15 GLN A 257 LYS A 273 1 17 HELIX 16 16 SER B 28 GLY B 47 1 20 HELIX 17 17 GLY B 71 GLY B 87 1 17 HELIX 18 18 GLU B 96 GLU B 98 5 3 HELIX 19 19 GLN B 99 GLU B 105 1 7 HELIX 20 20 PRO B 113 ALA B 117 5 5 HELIX 21 21 GLN B 119 ALA B 129 1 11 HELIX 22 22 GLN B 145 VAL B 156 1 12 HELIX 23 23 LEU B 180 THR B 189 1 10 HELIX 24 24 VAL B 198 LEU B 202 1 5 HELIX 25 25 GLN B 218 GLY B 230 1 13 HELIX 26 26 ASP B 241 ALA B 245 5 5 HELIX 27 27 GLN B 257 LYS B 273 1 17 HELIX 28 28 SER C 28 GLY C 47 1 20 HELIX 29 29 GLY C 71 GLY C 87 1 17 HELIX 30 30 GLU C 96 GLU C 98 5 3 HELIX 31 31 GLN C 99 ALA C 107 1 9 HELIX 32 32 PRO C 113 ALA C 117 5 5 HELIX 33 33 GLN C 119 ALA C 129 1 11 HELIX 34 34 SER C 142 GLN C 145 5 4 HELIX 35 35 LEU C 146 VAL C 156 1 11 HELIX 36 36 LEU C 180 THR C 188 1 9 HELIX 37 37 THR C 199 SER C 201 5 3 HELIX 38 38 GLN C 218 GLY C 230 1 13 HELIX 39 39 ASP C 241 ALA C 245 5 5 HELIX 40 40 ASP C 248 ALA C 252 5 5 HELIX 41 41 GLN C 257 LYS C 273 1 17 HELIX 42 42 SER D 28 GLY D 47 1 20 HELIX 43 43 GLY D 71 GLY D 87 1 17 HELIX 44 44 GLU D 96 GLU D 98 5 3 HELIX 45 45 GLN D 99 ALA D 107 1 9 HELIX 46 46 PRO D 113 ALA D 117 5 5 HELIX 47 47 GLN D 119 ALA D 129 1 11 HELIX 48 48 LEU D 146 VAL D 156 1 11 HELIX 49 49 LEU D 180 THR D 188 1 9 HELIX 50 50 VAL D 198 LEU D 202 1 5 HELIX 51 51 GLN D 218 GLY D 230 1 13 HELIX 52 52 GLN D 257 LYS D 273 1 17 SHEET 1 A 2 VAL A 3 SER A 6 0 SHEET 2 A 2 VAL A 9 ALA A 11 -1 O ALA A 11 N VAL A 3 SHEET 1 B10 LEU A 253 PRO A 254 0 SHEET 2 B10 GLY A 233 HIS A 239 1 N GLU A 237 O LEU A 253 SHEET 3 B10 VAL A 194 ASP A 197 1 N PHE A 196 O PHE A 235 SHEET 4 B10 VAL A 161 GLU A 165 1 N LEU A 163 O ILE A 195 SHEET 5 B10 VAL A 133 LYS A 136 1 N VAL A 133 O MET A 162 SHEET 6 B10 VAL A 109 VAL A 112 1 N VAL A 112 O ASN A 134 SHEET 7 B10 VAL A 90 ASP A 93 1 N THR A 92 O GLN A 111 SHEET 8 B10 PHE A 50 SER A 55 1 N PHE A 52 O ILE A 91 SHEET 9 B10 VAL A 18 VAL A 25 1 N LEU A 19 O VAL A 51 SHEET 10 B10 GLY A 233 HIS A 239 1 O LEU A 234 N PHE A 20 SHEET 1 C 2 SER A 168 SER A 169 0 SHEET 2 C 2 LEU A 175 VAL A 176 -1 O VAL A 176 N SER A 168 SHEET 1 D 2 VAL B 3 SER B 6 0 SHEET 2 D 2 VAL B 9 ALA B 11 -1 O VAL B 9 N SER B 6 SHEET 1 E10 LEU B 253 PRO B 254 0 SHEET 2 E10 GLY B 233 HIS B 239 1 N GLU B 237 O LEU B 253 SHEET 3 E10 VAL B 194 ASP B 197 1 N PHE B 196 O PHE B 235 SHEET 4 E10 VAL B 161 GLU B 165 1 N LEU B 163 O ILE B 195 SHEET 5 E10 VAL B 133 LYS B 136 1 N VAL B 133 O MET B 162 SHEET 6 E10 VAL B 109 VAL B 112 1 N VAL B 112 O ASN B 134 SHEET 7 E10 VAL B 90 ASP B 93 1 N THR B 92 O GLN B 111 SHEET 8 E10 PHE B 50 SER B 55 1 N PHE B 52 O ILE B 91 SHEET 9 E10 VAL B 18 VAL B 25 1 N LEU B 19 O VAL B 51 SHEET 10 E10 GLY B 233 HIS B 239 1 O LEU B 234 N PHE B 20 SHEET 1 F 2 SER B 168 SER B 169 0 SHEET 2 F 2 LEU B 175 VAL B 176 -1 O VAL B 176 N SER B 168 SHEET 1 G 2 ASN C 2 SER C 6 0 SHEET 2 G 2 VAL C 9 GLY C 12 -1 O ALA C 11 N VAL C 3 SHEET 1 H10 LEU C 253 PRO C 254 0 SHEET 2 H10 GLY C 233 HIS C 239 1 N GLU C 237 O LEU C 253 SHEET 3 H10 VAL C 194 ASP C 197 1 N PHE C 196 O PHE C 235 SHEET 4 H10 VAL C 161 GLU C 165 1 N GLU C 165 O ILE C 195 SHEET 5 H10 VAL C 133 LYS C 136 1 N VAL C 135 O CYS C 164 SHEET 6 H10 VAL C 109 VAL C 112 1 N VAL C 112 O ASN C 134 SHEET 7 H10 VAL C 90 ASP C 93 1 N THR C 92 O GLN C 111 SHEET 8 H10 PHE C 50 SER C 55 1 N PHE C 52 O ILE C 91 SHEET 9 H10 VAL C 18 VAL C 25 1 N LEU C 19 O VAL C 51 SHEET 10 H10 GLY C 233 HIS C 239 1 O LEU C 234 N PHE C 20 SHEET 1 I 2 SER C 168 SER C 169 0 SHEET 2 I 2 LEU C 175 VAL C 176 -1 O VAL C 176 N SER C 168 SHEET 1 J 2 GLN C 203 CYS C 204 0 SHEET 2 J 2 GLY C 213 GLY C 214 -1 O GLY C 213 N CYS C 204 SHEET 1 K 2 VAL D 3 SER D 6 0 SHEET 2 K 2 VAL D 9 ALA D 11 -1 O ALA D 11 N VAL D 3 SHEET 1 L10 LEU D 253 PRO D 254 0 SHEET 2 L10 GLY D 233 HIS D 239 1 N GLU D 237 O LEU D 253 SHEET 3 L10 VAL D 194 ASP D 197 1 N PHE D 196 O PHE D 235 SHEET 4 L10 VAL D 161 GLU D 165 1 N GLU D 165 O ASP D 197 SHEET 5 L10 VAL D 133 LYS D 136 1 N VAL D 135 O CYS D 164 SHEET 6 L10 VAL D 109 VAL D 112 1 N VAL D 112 O ASN D 134 SHEET 7 L10 VAL D 90 ASP D 93 1 N THR D 92 O GLN D 111 SHEET 8 L10 PHE D 50 SER D 55 1 N PHE D 52 O ILE D 91 SHEET 9 L10 VAL D 18 VAL D 25 1 N LEU D 19 O VAL D 51 SHEET 10 L10 GLY D 233 HIS D 239 1 O LEU D 234 N PHE D 20 SHEET 1 M 2 SER D 168 SER D 169 0 SHEET 2 M 2 LEU D 175 VAL D 176 -1 O VAL D 176 N SER D 168 SITE 1 AC1 17 ARG A 118 ASN C 24 LYS C 58 ASN C 60 SITE 2 AC1 17 ARG C 61 SER C 62 HIS C 200 GLN C 203 SITE 3 AC1 17 ARG C 205 ALA C 211 SER C 212 ASP C 248 SITE 4 AC1 17 NO3 C 283 NO3 C 284 EDO C 287 HOH C 342 SITE 5 AC1 17 HOH C 371 SITE 1 AC2 17 ASN A 24 LYS A 58 ASN A 60 ARG A 61 SITE 2 AC2 17 SER A 62 HIS A 200 GLN A 203 ARG A 205 SITE 3 AC2 17 ALA A 211 SER A 212 ASP A 248 NO3 A 283 SITE 4 AC2 17 NO3 A 284 HOH A 312 HOH A 317 HOH A 519 SITE 5 AC2 17 ARG C 118 SITE 1 AC3 10 LYS A 53 SER A 55 LYS A 58 GLN A 111 SITE 2 AC3 10 LYS A 136 HIS A 200 PHE A 235 A5P A 282 SITE 3 AC3 10 NO3 A 284 HOH A 319 SITE 1 AC4 9 PRO A 113 ALA A 114 LYS A 136 ARG A 166 SITE 2 AC4 9 A5P A 282 NO3 A 283 HOH A 313 HOH A 319 SITE 3 AC4 9 HOH A 356 SITE 1 AC5 10 LYS C 53 SER C 55 LYS C 58 GLN C 111 SITE 2 AC5 10 LYS C 136 HIS C 200 PHE C 235 A5P C 282 SITE 3 AC5 10 NO3 C 284 HOH C 306 SITE 1 AC6 10 PRO C 113 ALA C 114 LYS C 136 ARG C 166 SITE 2 AC6 10 A5P C 282 NO3 C 283 EDO C 287 HOH C 306 SITE 3 AC6 10 HOH C 312 HOH C 373 SITE 1 AC7 5 ASN C 13 PHE C 182 ARG C 183 VAL C 194 SITE 2 AC7 5 GLY C 230 SITE 1 AC8 7 ASP C 173 ASN C 174 GLN C 203 CYS C 204 SITE 2 AC8 7 HOH C 359 HOH C 389 HOH C 416 SITE 1 AC9 5 ASN A 13 PHE A 182 ARG A 183 VAL A 194 SITE 2 AC9 5 GLY A 230 SITE 1 BC1 8 LYS D 53 SER D 55 ASP D 93 GLN D 111 SITE 2 BC1 8 LYS D 136 HIS D 200 PHE D 235 EDO D 283 SITE 1 BC2 7 PHE A 170 SER B 169 PHE B 170 GLY B 171 SITE 2 BC2 7 HOH B 431 SER D 169 GLY D 171 SITE 1 BC3 9 LYS B 53 SER B 55 LYS B 58 ASP B 93 SITE 2 BC3 9 GLN B 111 LYS B 136 HIS B 200 PHE B 235 SITE 3 BC3 9 EDO B 284 SITE 1 BC4 10 ARG A 118 ARG C 166 GLN C 203 ARG C 205 SITE 2 BC4 10 A5P C 282 NO3 C 284 HOH C 359 HOH C 373 SITE 3 BC4 10 HOH C 389 HOH C 416 SITE 1 BC5 7 PRO B 113 ALA B 114 LYS B 136 ARG B 166 SITE 2 BC5 7 NO3 B 283 HOH B 323 HOH B 355 SITE 1 BC6 7 PRO D 113 ALA D 114 LYS D 136 ARG D 166 SITE 2 BC6 7 NO3 D 282 HOH D 328 HOH D 374 SITE 1 BC7 5 ASN B 13 PHE B 182 ARG B 183 VAL B 194 SITE 2 BC7 5 GLY B 230 SITE 1 BC8 4 ASP A 173 ASN A 174 HOH A 287 HOH A 293 CRYST1 89.720 92.080 152.980 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011146 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010860 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006537 0.00000