data_3TPN # _entry.id 3TPN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3TPN pdb_00003tpn 10.2210/pdb3tpn/pdb RCSB RCSB067765 ? ? WWPDB D_1000067765 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2D4N . unspecified PDB 2D4L . unspecified PDB 2D4M . unspecified PDB 3TP1 . unspecified PDB 3TPS . unspecified PDB 3TPW . unspecified PDB 3TPY . unspecified PDB 3TQ3 . unspecified PDB 3TQ4 . unspecified PDB 3TQ5 . unspecified PDB 3TRL . unspecified PDB 3TRN . unspecified PDB 3TS6 . unspecified PDB 3TSL . unspecified PDB 3TTA . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3TPN _pdbx_database_status.recvd_initial_deposition_date 2011-09-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nemeth, V.' 1 'Barabas, O.' 2 'Vertessy, G.B.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'Crystallization and preliminary X-ray studies of dUTPase from Mason-Pfizer monkey retrovirus.' 'Acta Crystallogr.,Sect.F' 62 399 401 2006 ? DK 1744-3091 ? ? 16582495 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barabas, O.' 1 ? primary 'Nemeth, V.' 2 ? primary 'Bodor, A.' 3 ? primary 'Perczel, A.' 4 ? primary 'Rosta, E.' 5 ? primary 'Kele, Z.' 6 ? primary 'Zagyva, I.' 7 ? primary 'Szabadka, Z.' 8 ? primary 'Grolmusz, V.I.' 9 ? primary 'Wilmanns, M.' 10 ? primary 'Vertessy, B.G.' 11 ? 1 'Barabas, O.' 12 ? 1 'Nemeth, V.' 13 ? 1 'Vertessy, B.G.' 14 ? # _cell.entry_id 3TPN _cell.length_a 60.333 _cell.length_b 60.333 _cell.length_c 64.519 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TPN _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE ; 16155.373 1 3.6.1.23 N1K 'dUTPase (catalytic) domain, UNP residues 608-759' ? 2 non-polymer syn ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; 467.157 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 5 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 1 ? ? ? ? 6 water nat water 18.015 120 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KRVEGPAPGPETSLWGSQLCSSQQKQPISKLTRATPGSAGLDLCSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRS SITMKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVSQGNRIAQLILLPLIETDNKVQQPYRGQGSFGSSDIY ; _entity_poly.pdbx_seq_one_letter_code_can ;KRVEGPAPGPETSLWGSQLCSSQQKQPISKLTRATPGSAGLDLCSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRS SITMKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVSQGNRIAQLILLPLIETDNKVQQPYRGQGSFGSSDIY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ARG n 1 3 VAL n 1 4 GLU n 1 5 GLY n 1 6 PRO n 1 7 ALA n 1 8 PRO n 1 9 GLY n 1 10 PRO n 1 11 GLU n 1 12 THR n 1 13 SER n 1 14 LEU n 1 15 TRP n 1 16 GLY n 1 17 SER n 1 18 GLN n 1 19 LEU n 1 20 CYS n 1 21 SER n 1 22 SER n 1 23 GLN n 1 24 GLN n 1 25 LYS n 1 26 GLN n 1 27 PRO n 1 28 ILE n 1 29 SER n 1 30 LYS n 1 31 LEU n 1 32 THR n 1 33 ARG n 1 34 ALA n 1 35 THR n 1 36 PRO n 1 37 GLY n 1 38 SER n 1 39 ALA n 1 40 GLY n 1 41 LEU n 1 42 ASP n 1 43 LEU n 1 44 CYS n 1 45 SER n 1 46 THR n 1 47 SER n 1 48 HIS n 1 49 THR n 1 50 VAL n 1 51 LEU n 1 52 THR n 1 53 PRO n 1 54 GLU n 1 55 MET n 1 56 GLY n 1 57 PRO n 1 58 GLN n 1 59 ALA n 1 60 LEU n 1 61 SER n 1 62 THR n 1 63 GLY n 1 64 ILE n 1 65 TYR n 1 66 GLY n 1 67 PRO n 1 68 LEU n 1 69 PRO n 1 70 PRO n 1 71 ASN n 1 72 THR n 1 73 PHE n 1 74 GLY n 1 75 LEU n 1 76 ILE n 1 77 LEU n 1 78 GLY n 1 79 ARG n 1 80 SER n 1 81 SER n 1 82 ILE n 1 83 THR n 1 84 MET n 1 85 LYS n 1 86 GLY n 1 87 LEU n 1 88 GLN n 1 89 VAL n 1 90 TYR n 1 91 PRO n 1 92 GLY n 1 93 VAL n 1 94 ILE n 1 95 ASP n 1 96 ASN n 1 97 ASP n 1 98 TYR n 1 99 THR n 1 100 GLY n 1 101 GLU n 1 102 ILE n 1 103 LYS n 1 104 ILE n 1 105 MET n 1 106 ALA n 1 107 LYS n 1 108 ALA n 1 109 VAL n 1 110 ASN n 1 111 ASN n 1 112 ILE n 1 113 VAL n 1 114 THR n 1 115 VAL n 1 116 SER n 1 117 GLN n 1 118 GLY n 1 119 ASN n 1 120 ARG n 1 121 ILE n 1 122 ALA n 1 123 GLN n 1 124 LEU n 1 125 ILE n 1 126 LEU n 1 127 LEU n 1 128 PRO n 1 129 LEU n 1 130 ILE n 1 131 GLU n 1 132 THR n 1 133 ASP n 1 134 ASN n 1 135 LYS n 1 136 VAL n 1 137 GLN n 1 138 GLN n 1 139 PRO n 1 140 TYR n 1 141 ARG n 1 142 GLY n 1 143 GLN n 1 144 GLY n 1 145 SER n 1 146 PHE n 1 147 GLY n 1 148 SER n 1 149 SER n 1 150 ASP n 1 151 ILE n 1 152 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name MPMV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag-pro _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mason-Pfizer monkey virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11855 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O92810_MPMV _struct_ref.pdbx_db_accession O92810 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NRVEGPAPGPETSLWGSQLCSSQQKQPISKLTRATPGSAGLDLCSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRS SITMKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVSQGNRIAQLILLPLIETDNKVQQPYRGQGSFGSSDIY ; _struct_ref.pdbx_align_begin 608 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TPN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O92810 _struct_ref_seq.db_align_beg 608 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 759 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 152 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3TPN _struct_ref_seq_dif.mon_id LYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O92810 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 608 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 DUP non-polymer . ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; ? 'C9 H16 N3 O13 P3' 467.157 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3TPN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PEG 8000, AMMONIUM CHLORIDE, TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2005-02-01 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si [111], horizontally focusing' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.8128 1.0 2 0.8430 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7B' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7B _diffrn_source.pdbx_wavelength 0.8128 _diffrn_source.pdbx_wavelength_list 0.8430 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3TPN _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.65 _reflns.number_obs 15802 _reflns.number_all 15802 _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.040 _reflns.pdbx_netI_over_sigmaI 15.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.75 _reflns_shell.percent_possible_all 98.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.488 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3TPN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14564 _refine.ls_number_reflns_all 14564 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 18.88 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 95.4 _refine.ls_R_factor_obs 0.159 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.157 _refine.ls_R_factor_R_free 0.182 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.300 _refine.ls_number_reflns_R_free 822 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.B_iso_mean 25.55 _refine.aniso_B[1][1] 0.99000 _refine.aniso_B[2][2] 0.99000 _refine.aniso_B[3][3] -1.48000 _refine.aniso_B[1][2] 0.49000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2D4L' _refine.pdbx_method_to_determine_struct 'rigid body refinement' _refine.pdbx_isotropic_thermal_model 'TLS and isotropic individual' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.082 _refine.overall_SU_ML 0.066 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.689 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 830 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 995 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 18.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.022 ? 921 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.984 2.064 ? 1269 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.075 5.000 ? 124 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.172 25.769 ? 26 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.289 15.000 ? 157 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 30.604 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.139 0.200 ? 159 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 641 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.239 0.200 ? 384 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.322 0.200 ? 627 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.179 0.200 ? 93 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.049 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.231 0.200 ? 86 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.106 0.200 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.678 2.000 ? 596 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.842 4.000 ? 962 'X-RAY DIFFRACTION' ? r_scbond_it 5.392 6.000 ? 354 'X-RAY DIFFRACTION' ? r_scangle_it 8.905 50.000 ? 301 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.65 _refine_ls_shell.d_res_low 1.69 _refine_ls_shell.number_reflns_R_work 700 _refine_ls_shell.R_factor_R_work 0.3030 _refine_ls_shell.percent_reflns_obs 61.40 _refine_ls_shell.R_factor_R_free 0.3290 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3TPN _struct.title 'Crystal structure of M-PMV dUTPASE complexed with dUPNPP, substrate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TPN _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'JELLY ROLL, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 29 ? LEU A 31 ? SER A 29 LEU A 31 5 ? 3 HELX_P HELX_P2 2 THR A 52 ? GLY A 56 ? THR A 52 GLY A 56 5 ? 5 HELX_P HELX_P3 3 ARG A 79 ? LYS A 85 ? ARG A 79 LYS A 85 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 44 SG A ? ? 1_555 E DTT . S1 ? ? A CYS 44 A DTT 154 1_555 ? ? ? ? ? ? ? 2.151 ? ? metalc1 metalc ? ? F HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 235 A MG 999 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc2 metalc ? ? F HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 241 A MG 999 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc3 metalc ? ? B DUP . O2A ? ? ? 1_555 C MG . MG ? ? A DUP 777 A MG 999 1_555 ? ? ? ? ? ? ? 1.940 ? ? metalc4 metalc ? ? B DUP . O1G ? ? ? 1_555 C MG . MG ? ? A DUP 777 A MG 999 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc5 metalc ? ? B DUP . O2B ? ? ? 1_555 C MG . MG ? ? A DUP 777 A MG 999 1_555 ? ? ? ? ? ? ? 2.089 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 66 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 66 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 67 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 67 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.70 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 26 ? PRO A 27 ? GLN A 26 PRO A 27 A 2 GLN A 58 ? TYR A 65 ? GLN A 58 TYR A 65 A 3 GLU A 101 ? ALA A 108 ? GLU A 101 ALA A 108 A 4 LEU A 87 ? VAL A 89 ? LEU A 87 VAL A 89 B 1 LEU A 41 ? CYS A 44 ? LEU A 41 CYS A 44 B 2 ARG A 120 ? PRO A 128 ? ARG A 120 PRO A 128 B 3 THR A 72 ? GLY A 78 ? THR A 72 GLY A 78 B 4 GLY A 92 ? ILE A 94 ? GLY A 92 ILE A 94 C 1 THR A 49 ? LEU A 51 ? THR A 49 LEU A 51 C 2 VAL A 113 ? VAL A 115 ? VAL A 113 VAL A 115 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 26 ? N GLN A 26 O TYR A 65 ? O TYR A 65 A 2 3 N LEU A 60 ? N LEU A 60 O ILE A 104 ? O ILE A 104 A 3 4 O LYS A 107 ? O LYS A 107 N GLN A 88 ? N GLN A 88 B 1 2 N LEU A 41 ? N LEU A 41 O LEU A 124 ? O LEU A 124 B 2 3 O ILE A 125 ? O ILE A 125 N LEU A 75 ? N LEU A 75 B 3 4 N GLY A 74 ? N GLY A 74 O ILE A 94 ? O ILE A 94 C 1 2 N THR A 49 ? N THR A 49 O VAL A 115 ? O VAL A 115 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DUP 777 ? 23 'BINDING SITE FOR RESIDUE DUP A 777' AC2 Software A MG 999 ? 4 'BINDING SITE FOR RESIDUE MG A 999' AC3 Software A TRS 153 ? 11 'BINDING SITE FOR RESIDUE TRS A 153' AC4 Software A DTT 154 ? 6 'BINDING SITE FOR RESIDUE DTT A 154' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ARG A 79 ? ARG A 79 . ? 3_575 ? 2 AC1 23 SER A 80 ? SER A 80 . ? 3_575 ? 3 AC1 23 SER A 81 ? SER A 81 . ? 3_575 ? 4 AC1 23 GLY A 92 ? GLY A 92 . ? 1_555 ? 5 AC1 23 VAL A 93 ? VAL A 93 . ? 1_555 ? 6 AC1 23 ILE A 94 ? ILE A 94 . ? 1_555 ? 7 AC1 23 ASP A 95 ? ASP A 95 . ? 1_555 ? 8 AC1 23 TYR A 98 ? TYR A 98 . ? 1_555 ? 9 AC1 23 ILE A 102 ? ILE A 102 . ? 1_555 ? 10 AC1 23 LYS A 103 ? LYS A 103 . ? 1_555 ? 11 AC1 23 MET A 105 ? MET A 105 . ? 1_555 ? 12 AC1 23 GLN A 123 ? GLN A 123 . ? 3_575 ? 13 AC1 23 HOH F . ? HOH A 156 . ? 1_555 ? 14 AC1 23 HOH F . ? HOH A 157 . ? 1_555 ? 15 AC1 23 HOH F . ? HOH A 177 . ? 1_555 ? 16 AC1 23 HOH F . ? HOH A 199 . ? 1_555 ? 17 AC1 23 HOH F . ? HOH A 206 . ? 1_555 ? 18 AC1 23 HOH F . ? HOH A 212 . ? 1_555 ? 19 AC1 23 HOH F . ? HOH A 235 . ? 1_555 ? 20 AC1 23 HOH F . ? HOH A 241 . ? 1_555 ? 21 AC1 23 HOH F . ? HOH A 246 . ? 3_575 ? 22 AC1 23 HOH F . ? HOH A 252 . ? 1_555 ? 23 AC1 23 MG C . ? MG A 999 . ? 1_555 ? 24 AC2 4 HOH F . ? HOH A 235 . ? 1_555 ? 25 AC2 4 HOH F . ? HOH A 241 . ? 1_555 ? 26 AC2 4 HOH F . ? HOH A 246 . ? 3_575 ? 27 AC2 4 DUP B . ? DUP A 777 . ? 1_555 ? 28 AC3 11 GLN A 88 ? GLN A 88 . ? 1_555 ? 29 AC3 11 GLN A 88 ? GLN A 88 . ? 2_775 ? 30 AC3 11 GLN A 88 ? GLN A 88 . ? 3_575 ? 31 AC3 11 VAL A 89 ? VAL A 89 . ? 3_575 ? 32 AC3 11 VAL A 89 ? VAL A 89 . ? 2_775 ? 33 AC3 11 VAL A 89 ? VAL A 89 . ? 1_555 ? 34 AC3 11 TYR A 90 ? TYR A 90 . ? 2_775 ? 35 AC3 11 TYR A 90 ? TYR A 90 . ? 3_575 ? 36 AC3 11 PRO A 91 ? PRO A 91 . ? 1_555 ? 37 AC3 11 PRO A 91 ? PRO A 91 . ? 2_775 ? 38 AC3 11 PRO A 91 ? PRO A 91 . ? 3_575 ? 39 AC4 6 CYS A 44 ? CYS A 44 . ? 1_555 ? 40 AC4 6 SER A 45 ? SER A 45 . ? 1_555 ? 41 AC4 6 THR A 46 ? THR A 46 . ? 1_555 ? 42 AC4 6 GLY A 118 ? GLY A 118 . ? 1_555 ? 43 AC4 6 HOH F . ? HOH A 217 . ? 1_555 ? 44 AC4 6 HOH F . ? HOH A 273 . ? 1_555 ? # _database_PDB_matrix.entry_id 3TPN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3TPN _atom_sites.fract_transf_matrix[1][1] 0.016575 _atom_sites.fract_transf_matrix[1][2] 0.009569 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019139 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015499 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _database_PDB_caveat.text 'CHIRALITY ERROR AT C2, C3 ATOMS OF RESIDUE DTT' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 ? ? ? A . n A 1 2 ARG 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 GLU 4 4 ? ? ? A . n A 1 5 GLY 5 5 ? ? ? A . n A 1 6 PRO 6 6 ? ? ? A . n A 1 7 ALA 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 GLY 9 9 ? ? ? A . n A 1 10 PRO 10 10 ? ? ? A . n A 1 11 GLU 11 11 ? ? ? A . n A 1 12 THR 12 12 ? ? ? A . n A 1 13 SER 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 TRP 15 15 ? ? ? A . n A 1 16 GLY 16 16 ? ? ? A . n A 1 17 SER 17 17 ? ? ? A . n A 1 18 GLN 18 18 ? ? ? A . n A 1 19 LEU 19 19 ? ? ? A . n A 1 20 CYS 20 20 ? ? ? A . n A 1 21 SER 21 21 ? ? ? A . n A 1 22 SER 22 22 ? ? ? A . n A 1 23 GLN 23 23 ? ? ? A . n A 1 24 GLN 24 24 ? ? ? A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 GLN 117 117 117 GLN GLN A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 ARG 120 120 120 ARG ARG A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLN 137 137 137 GLN GLN A . n A 1 138 GLN 138 138 ? ? ? A . n A 1 139 PRO 139 139 ? ? ? A . n A 1 140 TYR 140 140 ? ? ? A . n A 1 141 ARG 141 141 ? ? ? A . n A 1 142 GLY 142 142 ? ? ? A . n A 1 143 GLN 143 143 ? ? ? A . n A 1 144 GLY 144 144 ? ? ? A . n A 1 145 SER 145 145 ? ? ? A . n A 1 146 PHE 146 146 ? ? ? A . n A 1 147 GLY 147 147 ? ? ? A . n A 1 148 SER 148 148 ? ? ? A . n A 1 149 SER 149 149 ? ? ? A . n A 1 150 ASP 150 150 ? ? ? A . n A 1 151 ILE 151 151 ? ? ? A . n A 1 152 TYR 152 152 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DUP 1 777 777 DUP DUP A . C 3 MG 1 999 999 MG MG A . D 4 TRS 1 153 1 TRS TRS A . E 5 DTT 1 154 1 DTT DTT A . F 6 HOH 1 155 1 HOH HOH A . F 6 HOH 2 156 2 HOH HOH A . F 6 HOH 3 157 3 HOH HOH A . F 6 HOH 4 158 4 HOH HOH A . F 6 HOH 5 159 5 HOH HOH A . F 6 HOH 6 160 6 HOH HOH A . F 6 HOH 7 161 7 HOH HOH A . F 6 HOH 8 162 8 HOH HOH A . F 6 HOH 9 163 10 HOH HOH A . F 6 HOH 10 164 11 HOH HOH A . F 6 HOH 11 165 12 HOH HOH A . F 6 HOH 12 166 13 HOH HOH A . F 6 HOH 13 167 15 HOH HOH A . F 6 HOH 14 168 16 HOH HOH A . F 6 HOH 15 169 17 HOH HOH A . F 6 HOH 16 170 18 HOH HOH A . F 6 HOH 17 171 19 HOH HOH A . F 6 HOH 18 172 20 HOH HOH A . F 6 HOH 19 173 21 HOH HOH A . F 6 HOH 20 174 22 HOH HOH A . F 6 HOH 21 175 23 HOH HOH A . F 6 HOH 22 176 24 HOH HOH A . F 6 HOH 23 177 25 HOH HOH A . F 6 HOH 24 178 26 HOH HOH A . F 6 HOH 25 179 27 HOH HOH A . F 6 HOH 26 180 28 HOH HOH A . F 6 HOH 27 181 29 HOH HOH A . F 6 HOH 28 182 30 HOH HOH A . F 6 HOH 29 183 31 HOH HOH A . F 6 HOH 30 184 32 HOH HOH A . F 6 HOH 31 185 33 HOH HOH A . F 6 HOH 32 186 34 HOH HOH A . F 6 HOH 33 187 35 HOH HOH A . F 6 HOH 34 188 36 HOH HOH A . F 6 HOH 35 189 37 HOH HOH A . F 6 HOH 36 190 38 HOH HOH A . F 6 HOH 37 191 39 HOH HOH A . F 6 HOH 38 192 40 HOH HOH A . F 6 HOH 39 193 41 HOH HOH A . F 6 HOH 40 194 42 HOH HOH A . F 6 HOH 41 195 44 HOH HOH A . F 6 HOH 42 196 45 HOH HOH A . F 6 HOH 43 197 46 HOH HOH A . F 6 HOH 44 198 47 HOH HOH A . F 6 HOH 45 199 48 HOH HOH A . F 6 HOH 46 200 49 HOH HOH A . F 6 HOH 47 201 50 HOH HOH A . F 6 HOH 48 202 51 HOH HOH A . F 6 HOH 49 203 52 HOH HOH A . F 6 HOH 50 204 53 HOH HOH A . F 6 HOH 51 205 54 HOH HOH A . F 6 HOH 52 206 55 HOH HOH A . F 6 HOH 53 207 56 HOH HOH A . F 6 HOH 54 208 57 HOH HOH A . F 6 HOH 55 209 60 HOH HOH A . F 6 HOH 56 210 61 HOH HOH A . F 6 HOH 57 211 62 HOH HOH A . F 6 HOH 58 212 63 HOH HOH A . F 6 HOH 59 213 64 HOH HOH A . F 6 HOH 60 214 65 HOH HOH A . F 6 HOH 61 215 66 HOH HOH A . F 6 HOH 62 216 67 HOH HOH A . F 6 HOH 63 217 68 HOH HOH A . F 6 HOH 64 218 69 HOH HOH A . F 6 HOH 65 219 70 HOH HOH A . F 6 HOH 66 220 71 HOH HOH A . F 6 HOH 67 221 72 HOH HOH A . F 6 HOH 68 222 73 HOH HOH A . F 6 HOH 69 223 74 HOH HOH A . F 6 HOH 70 224 75 HOH HOH A . F 6 HOH 71 225 77 HOH HOH A . F 6 HOH 72 226 79 HOH HOH A . F 6 HOH 73 227 80 HOH HOH A . F 6 HOH 74 228 81 HOH HOH A . F 6 HOH 75 229 82 HOH HOH A . F 6 HOH 76 230 83 HOH HOH A . F 6 HOH 77 231 84 HOH HOH A . F 6 HOH 78 232 85 HOH HOH A . F 6 HOH 79 233 86 HOH HOH A . F 6 HOH 80 234 87 HOH HOH A . F 6 HOH 81 235 88 HOH HOH A . F 6 HOH 82 236 89 HOH HOH A . F 6 HOH 83 237 90 HOH HOH A . F 6 HOH 84 238 91 HOH HOH A . F 6 HOH 85 239 92 HOH HOH A . F 6 HOH 86 240 93 HOH HOH A . F 6 HOH 87 241 94 HOH HOH A . F 6 HOH 88 242 96 HOH HOH A . F 6 HOH 89 243 97 HOH HOH A . F 6 HOH 90 244 98 HOH HOH A . F 6 HOH 91 245 100 HOH HOH A . F 6 HOH 92 246 101 HOH HOH A . F 6 HOH 93 247 102 HOH HOH A . F 6 HOH 94 248 104 HOH HOH A . F 6 HOH 95 249 106 HOH HOH A . F 6 HOH 96 250 107 HOH HOH A . F 6 HOH 97 251 108 HOH HOH A . F 6 HOH 98 252 109 HOH HOH A . F 6 HOH 99 253 110 HOH HOH A . F 6 HOH 100 254 111 HOH HOH A . F 6 HOH 101 255 112 HOH HOH A . F 6 HOH 102 256 113 HOH HOH A . F 6 HOH 103 257 114 HOH HOH A . F 6 HOH 104 258 115 HOH HOH A . F 6 HOH 105 259 116 HOH HOH A . F 6 HOH 106 260 117 HOH HOH A . F 6 HOH 107 261 118 HOH HOH A . F 6 HOH 108 262 119 HOH HOH A . F 6 HOH 109 263 120 HOH HOH A . F 6 HOH 110 264 121 HOH HOH A . F 6 HOH 111 265 122 HOH HOH A . F 6 HOH 112 266 123 HOH HOH A . F 6 HOH 113 267 124 HOH HOH A . F 6 HOH 114 268 125 HOH HOH A . F 6 HOH 115 269 126 HOH HOH A . F 6 HOH 116 270 127 HOH HOH A . F 6 HOH 117 271 129 HOH HOH A . F 6 HOH 118 272 130 HOH HOH A . F 6 HOH 119 273 135 HOH HOH A . F 6 HOH 120 274 140 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10990 ? 1 MORE -99 ? 1 'SSA (A^2)' 13440 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_775 -y+2,x-y+2,z -0.5000000000 -0.8660254038 0.0000000000 60.3330000000 0.8660254038 -0.5000000000 0.0000000000 104.4998213731 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_575 -x+y,-x+2,z -0.5000000000 0.8660254038 0.0000000000 -60.3330000000 -0.8660254038 -0.5000000000 0.0000000000 104.4998213731 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A TRS 153 ? D TRS . 2 1 A TRS 153 ? D TRS . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? A HOH 235 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 241 ? 1_555 87.6 ? 2 O ? F HOH . ? A HOH 235 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O2A ? B DUP . ? A DUP 777 ? 1_555 92.2 ? 3 O ? F HOH . ? A HOH 241 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O2A ? B DUP . ? A DUP 777 ? 1_555 90.8 ? 4 O ? F HOH . ? A HOH 235 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O1G ? B DUP . ? A DUP 777 ? 1_555 86.2 ? 5 O ? F HOH . ? A HOH 241 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O1G ? B DUP . ? A DUP 777 ? 1_555 168.5 ? 6 O2A ? B DUP . ? A DUP 777 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O1G ? B DUP . ? A DUP 777 ? 1_555 99.1 ? 7 O ? F HOH . ? A HOH 235 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O2B ? B DUP . ? A DUP 777 ? 1_555 177.2 ? 8 O ? F HOH . ? A HOH 241 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O2B ? B DUP . ? A DUP 777 ? 1_555 94.5 ? 9 O2A ? B DUP . ? A DUP 777 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O2B ? B DUP . ? A DUP 777 ? 1_555 89.6 ? 10 O1G ? B DUP . ? A DUP 777 ? 1_555 MG ? C MG . ? A MG 999 ? 1_555 O2B ? B DUP . ? A DUP 777 ? 1_555 91.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-12 2 'Structure model' 1 1 2017-11-08 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' diffrn_source 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_conn_type 10 3 'Structure model' struct_ref_seq_dif 11 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.conn_type_id' 17 3 'Structure model' '_struct_conn.id' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 3 'Structure model' '_struct_conn_type.id' 33 3 'Structure model' '_struct_ref_seq_dif.details' 34 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 2.3110 _pdbx_refine_tls.origin_y 58.2124 _pdbx_refine_tls.origin_z 30.5894 _pdbx_refine_tls.T[1][1] -0.0163 _pdbx_refine_tls.T[2][2] -0.0787 _pdbx_refine_tls.T[3][3] -0.0165 _pdbx_refine_tls.T[1][2] 0.0113 _pdbx_refine_tls.T[1][3] -0.0058 _pdbx_refine_tls.T[2][3] 0.0185 _pdbx_refine_tls.L[1][1] 0.8182 _pdbx_refine_tls.L[2][2] 0.8668 _pdbx_refine_tls.L[3][3] 2.2652 _pdbx_refine_tls.L[1][2] 0.1657 _pdbx_refine_tls.L[1][3] -0.4201 _pdbx_refine_tls.L[2][3] 0.1460 _pdbx_refine_tls.S[1][1] 0.0037 _pdbx_refine_tls.S[1][2] -0.0510 _pdbx_refine_tls.S[1][3] -0.1010 _pdbx_refine_tls.S[2][1] 0.0208 _pdbx_refine_tls.S[2][2] 0.0220 _pdbx_refine_tls.S[2][3] -0.0099 _pdbx_refine_tls.S[3][1] 0.1174 _pdbx_refine_tls.S[3][2] 0.0604 _pdbx_refine_tls.S[3][3] -0.0257 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 25 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 137 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 REFMAC refinement 5.2.0019 ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 REFMAC phasing 5.2.0005 ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 194 ? ? O A HOH 244 ? ? 2.12 2 1 OG A SER 45 ? ? O A HOH 231 ? ? 2.18 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A DTT 154 ? 'WRONG HAND' . 2 1 C3 ? A DTT 154 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 117 ? OE1 ? A GLN 117 OE1 2 1 Y 1 A GLN 117 ? NE2 ? A GLN 117 NE2 3 1 Y 1 A LYS 135 ? CD ? A LYS 135 CD 4 1 Y 1 A LYS 135 ? CE ? A LYS 135 CE 5 1 Y 1 A LYS 135 ? NZ ? A LYS 135 NZ 6 1 Y 1 A GLN 137 ? CD ? A GLN 137 CD 7 1 Y 1 A GLN 137 ? OE1 ? A GLN 137 OE1 8 1 Y 1 A GLN 137 ? NE2 ? A GLN 137 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 1 ? A LYS 1 2 1 Y 1 A ARG 2 ? A ARG 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A GLU 4 ? A GLU 4 5 1 Y 1 A GLY 5 ? A GLY 5 6 1 Y 1 A PRO 6 ? A PRO 6 7 1 Y 1 A ALA 7 ? A ALA 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A GLY 9 ? A GLY 9 10 1 Y 1 A PRO 10 ? A PRO 10 11 1 Y 1 A GLU 11 ? A GLU 11 12 1 Y 1 A THR 12 ? A THR 12 13 1 Y 1 A SER 13 ? A SER 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A TRP 15 ? A TRP 15 16 1 Y 1 A GLY 16 ? A GLY 16 17 1 Y 1 A SER 17 ? A SER 17 18 1 Y 1 A GLN 18 ? A GLN 18 19 1 Y 1 A LEU 19 ? A LEU 19 20 1 Y 1 A CYS 20 ? A CYS 20 21 1 Y 1 A SER 21 ? A SER 21 22 1 Y 1 A SER 22 ? A SER 22 23 1 Y 1 A GLN 23 ? A GLN 23 24 1 Y 1 A GLN 24 ? A GLN 24 25 1 Y 1 A GLN 138 ? A GLN 138 26 1 Y 1 A PRO 139 ? A PRO 139 27 1 Y 1 A TYR 140 ? A TYR 140 28 1 Y 1 A ARG 141 ? A ARG 141 29 1 Y 1 A GLY 142 ? A GLY 142 30 1 Y 1 A GLN 143 ? A GLN 143 31 1 Y 1 A GLY 144 ? A GLY 144 32 1 Y 1 A SER 145 ? A SER 145 33 1 Y 1 A PHE 146 ? A PHE 146 34 1 Y 1 A GLY 147 ? A GLY 147 35 1 Y 1 A SER 148 ? A SER 148 36 1 Y 1 A SER 149 ? A SER 149 37 1 Y 1 A ASP 150 ? A ASP 150 38 1 Y 1 A ILE 151 ? A ILE 151 39 1 Y 1 A TYR 152 ? A TYR 152 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DTT S1 S N N 88 DTT C1 C N N 89 DTT C2 C N R 90 DTT O2 O N N 91 DTT C3 C N R 92 DTT O3 O N N 93 DTT C4 C N N 94 DTT S4 S N N 95 DTT HS1 H N N 96 DTT H11 H N N 97 DTT H12 H N N 98 DTT H2 H N N 99 DTT HO2 H N N 100 DTT H3 H N N 101 DTT HO3 H N N 102 DTT H41 H N N 103 DTT H42 H N N 104 DTT HS2 H N N 105 DUP O4 O N N 106 DUP C4 C Y N 107 DUP C5 C Y N 108 DUP C6 C Y N 109 DUP N3 N Y N 110 DUP C2 C Y N 111 DUP O2 O N N 112 DUP N1 N Y N 113 DUP "C1'" C N R 114 DUP "C2'" C N N 115 DUP "C3'" C N S 116 DUP "O3'" O N N 117 DUP "O4'" O N N 118 DUP "C4'" C N R 119 DUP "C5'" C N N 120 DUP "O5'" O N N 121 DUP PA P N S 122 DUP O1A O N N 123 DUP O2A O N N 124 DUP N3A N N N 125 DUP PB P N R 126 DUP O1B O N N 127 DUP O2B O N N 128 DUP O3B O N N 129 DUP PG P N N 130 DUP O2G O N N 131 DUP O1G O N N 132 DUP O3G O N N 133 DUP H5 H N N 134 DUP H6 H N N 135 DUP HN3 H N N 136 DUP "H1'" H N N 137 DUP "H2'1" H N N 138 DUP "H2'2" H N N 139 DUP H1 H N N 140 DUP "H3'" H N N 141 DUP "H4'" H N N 142 DUP "H5'1" H N N 143 DUP "H5'2" H N N 144 DUP H2A H N N 145 DUP H3A H N N 146 DUP H2B H N N 147 DUP H1G H N N 148 DUP H3G H N N 149 GLN N N N N 150 GLN CA C N S 151 GLN C C N N 152 GLN O O N N 153 GLN CB C N N 154 GLN CG C N N 155 GLN CD C N N 156 GLN OE1 O N N 157 GLN NE2 N N N 158 GLN OXT O N N 159 GLN H H N N 160 GLN H2 H N N 161 GLN HA H N N 162 GLN HB2 H N N 163 GLN HB3 H N N 164 GLN HG2 H N N 165 GLN HG3 H N N 166 GLN HE21 H N N 167 GLN HE22 H N N 168 GLN HXT H N N 169 GLU N N N N 170 GLU CA C N S 171 GLU C C N N 172 GLU O O N N 173 GLU CB C N N 174 GLU CG C N N 175 GLU CD C N N 176 GLU OE1 O N N 177 GLU OE2 O N N 178 GLU OXT O N N 179 GLU H H N N 180 GLU H2 H N N 181 GLU HA H N N 182 GLU HB2 H N N 183 GLU HB3 H N N 184 GLU HG2 H N N 185 GLU HG3 H N N 186 GLU HE2 H N N 187 GLU HXT H N N 188 GLY N N N N 189 GLY CA C N N 190 GLY C C N N 191 GLY O O N N 192 GLY OXT O N N 193 GLY H H N N 194 GLY H2 H N N 195 GLY HA2 H N N 196 GLY HA3 H N N 197 GLY HXT H N N 198 HIS N N N N 199 HIS CA C N S 200 HIS C C N N 201 HIS O O N N 202 HIS CB C N N 203 HIS CG C Y N 204 HIS ND1 N Y N 205 HIS CD2 C Y N 206 HIS CE1 C Y N 207 HIS NE2 N Y N 208 HIS OXT O N N 209 HIS H H N N 210 HIS H2 H N N 211 HIS HA H N N 212 HIS HB2 H N N 213 HIS HB3 H N N 214 HIS HD1 H N N 215 HIS HD2 H N N 216 HIS HE1 H N N 217 HIS HE2 H N N 218 HIS HXT H N N 219 HOH O O N N 220 HOH H1 H N N 221 HOH H2 H N N 222 ILE N N N N 223 ILE CA C N S 224 ILE C C N N 225 ILE O O N N 226 ILE CB C N S 227 ILE CG1 C N N 228 ILE CG2 C N N 229 ILE CD1 C N N 230 ILE OXT O N N 231 ILE H H N N 232 ILE H2 H N N 233 ILE HA H N N 234 ILE HB H N N 235 ILE HG12 H N N 236 ILE HG13 H N N 237 ILE HG21 H N N 238 ILE HG22 H N N 239 ILE HG23 H N N 240 ILE HD11 H N N 241 ILE HD12 H N N 242 ILE HD13 H N N 243 ILE HXT H N N 244 LEU N N N N 245 LEU CA C N S 246 LEU C C N N 247 LEU O O N N 248 LEU CB C N N 249 LEU CG C N N 250 LEU CD1 C N N 251 LEU CD2 C N N 252 LEU OXT O N N 253 LEU H H N N 254 LEU H2 H N N 255 LEU HA H N N 256 LEU HB2 H N N 257 LEU HB3 H N N 258 LEU HG H N N 259 LEU HD11 H N N 260 LEU HD12 H N N 261 LEU HD13 H N N 262 LEU HD21 H N N 263 LEU HD22 H N N 264 LEU HD23 H N N 265 LEU HXT H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 MET N N N N 292 MET CA C N S 293 MET C C N N 294 MET O O N N 295 MET CB C N N 296 MET CG C N N 297 MET SD S N N 298 MET CE C N N 299 MET OXT O N N 300 MET H H N N 301 MET H2 H N N 302 MET HA H N N 303 MET HB2 H N N 304 MET HB3 H N N 305 MET HG2 H N N 306 MET HG3 H N N 307 MET HE1 H N N 308 MET HE2 H N N 309 MET HE3 H N N 310 MET HXT H N N 311 MG MG MG N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TRS C C N N 411 TRS C1 C N N 412 TRS C2 C N N 413 TRS C3 C N N 414 TRS N N N N 415 TRS O1 O N N 416 TRS O2 O N N 417 TRS O3 O N N 418 TRS H11 H N N 419 TRS H12 H N N 420 TRS H21 H N N 421 TRS H22 H N N 422 TRS H31 H N N 423 TRS H32 H N N 424 TRS HN1 H N N 425 TRS HN2 H N N 426 TRS HN3 H N N 427 TRS HO1 H N N 428 TRS HO2 H N N 429 TRS HO3 H N N 430 TYR N N N N 431 TYR CA C N S 432 TYR C C N N 433 TYR O O N N 434 TYR CB C N N 435 TYR CG C Y N 436 TYR CD1 C Y N 437 TYR CD2 C Y N 438 TYR CE1 C Y N 439 TYR CE2 C Y N 440 TYR CZ C Y N 441 TYR OH O N N 442 TYR OXT O N N 443 TYR H H N N 444 TYR H2 H N N 445 TYR HA H N N 446 TYR HB2 H N N 447 TYR HB3 H N N 448 TYR HD1 H N N 449 TYR HD2 H N N 450 TYR HE1 H N N 451 TYR HE2 H N N 452 TYR HH H N N 453 TYR HXT H N N 454 VAL N N N N 455 VAL CA C N S 456 VAL C C N N 457 VAL O O N N 458 VAL CB C N N 459 VAL CG1 C N N 460 VAL CG2 C N N 461 VAL OXT O N N 462 VAL H H N N 463 VAL H2 H N N 464 VAL HA H N N 465 VAL HB H N N 466 VAL HG11 H N N 467 VAL HG12 H N N 468 VAL HG13 H N N 469 VAL HG21 H N N 470 VAL HG22 H N N 471 VAL HG23 H N N 472 VAL HXT H N N 473 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DTT S1 C1 sing N N 83 DTT S1 HS1 sing N N 84 DTT C1 C2 sing N N 85 DTT C1 H11 sing N N 86 DTT C1 H12 sing N N 87 DTT C2 O2 sing N N 88 DTT C2 C3 sing N N 89 DTT C2 H2 sing N N 90 DTT O2 HO2 sing N N 91 DTT C3 O3 sing N N 92 DTT C3 C4 sing N N 93 DTT C3 H3 sing N N 94 DTT O3 HO3 sing N N 95 DTT C4 S4 sing N N 96 DTT C4 H41 sing N N 97 DTT C4 H42 sing N N 98 DTT S4 HS2 sing N N 99 DUP O4 C4 doub N N 100 DUP C4 C5 sing Y N 101 DUP C4 N3 sing Y N 102 DUP C5 C6 doub Y N 103 DUP C5 H5 sing N N 104 DUP C6 N1 sing Y N 105 DUP C6 H6 sing N N 106 DUP N3 C2 sing Y N 107 DUP N3 HN3 sing N N 108 DUP C2 O2 doub N N 109 DUP C2 N1 sing Y N 110 DUP N1 "C1'" sing N N 111 DUP "C1'" "C2'" sing N N 112 DUP "C1'" "O4'" sing N N 113 DUP "C1'" "H1'" sing N N 114 DUP "C2'" "C3'" sing N N 115 DUP "C2'" "H2'1" sing N N 116 DUP "C2'" "H2'2" sing N N 117 DUP "C3'" "O3'" sing N N 118 DUP "C3'" "C4'" sing N N 119 DUP "C3'" H1 sing N N 120 DUP "O3'" "H3'" sing N N 121 DUP "O4'" "C4'" sing N N 122 DUP "C4'" "C5'" sing N N 123 DUP "C4'" "H4'" sing N N 124 DUP "C5'" "O5'" sing N N 125 DUP "C5'" "H5'1" sing N N 126 DUP "C5'" "H5'2" sing N N 127 DUP "O5'" PA sing N N 128 DUP PA O1A doub N N 129 DUP PA O2A sing N N 130 DUP PA N3A sing N N 131 DUP O2A H2A sing N N 132 DUP N3A PB sing N N 133 DUP N3A H3A sing N N 134 DUP PB O1B doub N N 135 DUP PB O2B sing N N 136 DUP PB O3B sing N N 137 DUP O2B H2B sing N N 138 DUP O3B PG sing N N 139 DUP PG O2G doub N N 140 DUP PG O1G sing N N 141 DUP PG O3G sing N N 142 DUP O1G H1G sing N N 143 DUP O3G H3G sing N N 144 GLN N CA sing N N 145 GLN N H sing N N 146 GLN N H2 sing N N 147 GLN CA C sing N N 148 GLN CA CB sing N N 149 GLN CA HA sing N N 150 GLN C O doub N N 151 GLN C OXT sing N N 152 GLN CB CG sing N N 153 GLN CB HB2 sing N N 154 GLN CB HB3 sing N N 155 GLN CG CD sing N N 156 GLN CG HG2 sing N N 157 GLN CG HG3 sing N N 158 GLN CD OE1 doub N N 159 GLN CD NE2 sing N N 160 GLN NE2 HE21 sing N N 161 GLN NE2 HE22 sing N N 162 GLN OXT HXT sing N N 163 GLU N CA sing N N 164 GLU N H sing N N 165 GLU N H2 sing N N 166 GLU CA C sing N N 167 GLU CA CB sing N N 168 GLU CA HA sing N N 169 GLU C O doub N N 170 GLU C OXT sing N N 171 GLU CB CG sing N N 172 GLU CB HB2 sing N N 173 GLU CB HB3 sing N N 174 GLU CG CD sing N N 175 GLU CG HG2 sing N N 176 GLU CG HG3 sing N N 177 GLU CD OE1 doub N N 178 GLU CD OE2 sing N N 179 GLU OE2 HE2 sing N N 180 GLU OXT HXT sing N N 181 GLY N CA sing N N 182 GLY N H sing N N 183 GLY N H2 sing N N 184 GLY CA C sing N N 185 GLY CA HA2 sing N N 186 GLY CA HA3 sing N N 187 GLY C O doub N N 188 GLY C OXT sing N N 189 GLY OXT HXT sing N N 190 HIS N CA sing N N 191 HIS N H sing N N 192 HIS N H2 sing N N 193 HIS CA C sing N N 194 HIS CA CB sing N N 195 HIS CA HA sing N N 196 HIS C O doub N N 197 HIS C OXT sing N N 198 HIS CB CG sing N N 199 HIS CB HB2 sing N N 200 HIS CB HB3 sing N N 201 HIS CG ND1 sing Y N 202 HIS CG CD2 doub Y N 203 HIS ND1 CE1 doub Y N 204 HIS ND1 HD1 sing N N 205 HIS CD2 NE2 sing Y N 206 HIS CD2 HD2 sing N N 207 HIS CE1 NE2 sing Y N 208 HIS CE1 HE1 sing N N 209 HIS NE2 HE2 sing N N 210 HIS OXT HXT sing N N 211 HOH O H1 sing N N 212 HOH O H2 sing N N 213 ILE N CA sing N N 214 ILE N H sing N N 215 ILE N H2 sing N N 216 ILE CA C sing N N 217 ILE CA CB sing N N 218 ILE CA HA sing N N 219 ILE C O doub N N 220 ILE C OXT sing N N 221 ILE CB CG1 sing N N 222 ILE CB CG2 sing N N 223 ILE CB HB sing N N 224 ILE CG1 CD1 sing N N 225 ILE CG1 HG12 sing N N 226 ILE CG1 HG13 sing N N 227 ILE CG2 HG21 sing N N 228 ILE CG2 HG22 sing N N 229 ILE CG2 HG23 sing N N 230 ILE CD1 HD11 sing N N 231 ILE CD1 HD12 sing N N 232 ILE CD1 HD13 sing N N 233 ILE OXT HXT sing N N 234 LEU N CA sing N N 235 LEU N H sing N N 236 LEU N H2 sing N N 237 LEU CA C sing N N 238 LEU CA CB sing N N 239 LEU CA HA sing N N 240 LEU C O doub N N 241 LEU C OXT sing N N 242 LEU CB CG sing N N 243 LEU CB HB2 sing N N 244 LEU CB HB3 sing N N 245 LEU CG CD1 sing N N 246 LEU CG CD2 sing N N 247 LEU CG HG sing N N 248 LEU CD1 HD11 sing N N 249 LEU CD1 HD12 sing N N 250 LEU CD1 HD13 sing N N 251 LEU CD2 HD21 sing N N 252 LEU CD2 HD22 sing N N 253 LEU CD2 HD23 sing N N 254 LEU OXT HXT sing N N 255 LYS N CA sing N N 256 LYS N H sing N N 257 LYS N H2 sing N N 258 LYS CA C sing N N 259 LYS CA CB sing N N 260 LYS CA HA sing N N 261 LYS C O doub N N 262 LYS C OXT sing N N 263 LYS CB CG sing N N 264 LYS CB HB2 sing N N 265 LYS CB HB3 sing N N 266 LYS CG CD sing N N 267 LYS CG HG2 sing N N 268 LYS CG HG3 sing N N 269 LYS CD CE sing N N 270 LYS CD HD2 sing N N 271 LYS CD HD3 sing N N 272 LYS CE NZ sing N N 273 LYS CE HE2 sing N N 274 LYS CE HE3 sing N N 275 LYS NZ HZ1 sing N N 276 LYS NZ HZ2 sing N N 277 LYS NZ HZ3 sing N N 278 LYS OXT HXT sing N N 279 MET N CA sing N N 280 MET N H sing N N 281 MET N H2 sing N N 282 MET CA C sing N N 283 MET CA CB sing N N 284 MET CA HA sing N N 285 MET C O doub N N 286 MET C OXT sing N N 287 MET CB CG sing N N 288 MET CB HB2 sing N N 289 MET CB HB3 sing N N 290 MET CG SD sing N N 291 MET CG HG2 sing N N 292 MET CG HG3 sing N N 293 MET SD CE sing N N 294 MET CE HE1 sing N N 295 MET CE HE2 sing N N 296 MET CE HE3 sing N N 297 MET OXT HXT sing N N 298 PHE N CA sing N N 299 PHE N H sing N N 300 PHE N H2 sing N N 301 PHE CA C sing N N 302 PHE CA CB sing N N 303 PHE CA HA sing N N 304 PHE C O doub N N 305 PHE C OXT sing N N 306 PHE CB CG sing N N 307 PHE CB HB2 sing N N 308 PHE CB HB3 sing N N 309 PHE CG CD1 doub Y N 310 PHE CG CD2 sing Y N 311 PHE CD1 CE1 sing Y N 312 PHE CD1 HD1 sing N N 313 PHE CD2 CE2 doub Y N 314 PHE CD2 HD2 sing N N 315 PHE CE1 CZ doub Y N 316 PHE CE1 HE1 sing N N 317 PHE CE2 CZ sing Y N 318 PHE CE2 HE2 sing N N 319 PHE CZ HZ sing N N 320 PHE OXT HXT sing N N 321 PRO N CA sing N N 322 PRO N CD sing N N 323 PRO N H sing N N 324 PRO CA C sing N N 325 PRO CA CB sing N N 326 PRO CA HA sing N N 327 PRO C O doub N N 328 PRO C OXT sing N N 329 PRO CB CG sing N N 330 PRO CB HB2 sing N N 331 PRO CB HB3 sing N N 332 PRO CG CD sing N N 333 PRO CG HG2 sing N N 334 PRO CG HG3 sing N N 335 PRO CD HD2 sing N N 336 PRO CD HD3 sing N N 337 PRO OXT HXT sing N N 338 SER N CA sing N N 339 SER N H sing N N 340 SER N H2 sing N N 341 SER CA C sing N N 342 SER CA CB sing N N 343 SER CA HA sing N N 344 SER C O doub N N 345 SER C OXT sing N N 346 SER CB OG sing N N 347 SER CB HB2 sing N N 348 SER CB HB3 sing N N 349 SER OG HG sing N N 350 SER OXT HXT sing N N 351 THR N CA sing N N 352 THR N H sing N N 353 THR N H2 sing N N 354 THR CA C sing N N 355 THR CA CB sing N N 356 THR CA HA sing N N 357 THR C O doub N N 358 THR C OXT sing N N 359 THR CB OG1 sing N N 360 THR CB CG2 sing N N 361 THR CB HB sing N N 362 THR OG1 HG1 sing N N 363 THR CG2 HG21 sing N N 364 THR CG2 HG22 sing N N 365 THR CG2 HG23 sing N N 366 THR OXT HXT sing N N 367 TRP N CA sing N N 368 TRP N H sing N N 369 TRP N H2 sing N N 370 TRP CA C sing N N 371 TRP CA CB sing N N 372 TRP CA HA sing N N 373 TRP C O doub N N 374 TRP C OXT sing N N 375 TRP CB CG sing N N 376 TRP CB HB2 sing N N 377 TRP CB HB3 sing N N 378 TRP CG CD1 doub Y N 379 TRP CG CD2 sing Y N 380 TRP CD1 NE1 sing Y N 381 TRP CD1 HD1 sing N N 382 TRP CD2 CE2 doub Y N 383 TRP CD2 CE3 sing Y N 384 TRP NE1 CE2 sing Y N 385 TRP NE1 HE1 sing N N 386 TRP CE2 CZ2 sing Y N 387 TRP CE3 CZ3 doub Y N 388 TRP CE3 HE3 sing N N 389 TRP CZ2 CH2 doub Y N 390 TRP CZ2 HZ2 sing N N 391 TRP CZ3 CH2 sing Y N 392 TRP CZ3 HZ3 sing N N 393 TRP CH2 HH2 sing N N 394 TRP OXT HXT sing N N 395 TRS C C1 sing N N 396 TRS C C2 sing N N 397 TRS C C3 sing N N 398 TRS C N sing N N 399 TRS C1 O1 sing N N 400 TRS C1 H11 sing N N 401 TRS C1 H12 sing N N 402 TRS C2 O2 sing N N 403 TRS C2 H21 sing N N 404 TRS C2 H22 sing N N 405 TRS C3 O3 sing N N 406 TRS C3 H31 sing N N 407 TRS C3 H32 sing N N 408 TRS N HN1 sing N N 409 TRS N HN2 sing N N 410 TRS N HN3 sing N N 411 TRS O1 HO1 sing N N 412 TRS O2 HO2 sing N N 413 TRS O3 HO3 sing N N 414 TYR N CA sing N N 415 TYR N H sing N N 416 TYR N H2 sing N N 417 TYR CA C sing N N 418 TYR CA CB sing N N 419 TYR CA HA sing N N 420 TYR C O doub N N 421 TYR C OXT sing N N 422 TYR CB CG sing N N 423 TYR CB HB2 sing N N 424 TYR CB HB3 sing N N 425 TYR CG CD1 doub Y N 426 TYR CG CD2 sing Y N 427 TYR CD1 CE1 sing Y N 428 TYR CD1 HD1 sing N N 429 TYR CD2 CE2 doub Y N 430 TYR CD2 HD2 sing N N 431 TYR CE1 CZ doub Y N 432 TYR CE1 HE1 sing N N 433 TYR CE2 CZ sing Y N 434 TYR CE2 HE2 sing N N 435 TYR CZ OH sing N N 436 TYR OH HH sing N N 437 TYR OXT HXT sing N N 438 VAL N CA sing N N 439 VAL N H sing N N 440 VAL N H2 sing N N 441 VAL CA C sing N N 442 VAL CA CB sing N N 443 VAL CA HA sing N N 444 VAL C O doub N N 445 VAL C OXT sing N N 446 VAL CB CG1 sing N N 447 VAL CB CG2 sing N N 448 VAL CB HB sing N N 449 VAL CG1 HG11 sing N N 450 VAL CG1 HG12 sing N N 451 VAL CG1 HG13 sing N N 452 VAL CG2 HG21 sing N N 453 VAL CG2 HG22 sing N N 454 VAL CG2 HG23 sing N N 455 VAL OXT HXT sing N N 456 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; DUP 3 'MAGNESIUM ION' MG 4 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 5 2,3-DIHYDROXY-1,4-DITHIOBUTANE DTT 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2D4L _pdbx_initial_refinement_model.details 'PDB entry 2D4L' #