data_3TQ2 # _entry.id 3TQ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3TQ2 pdb_00003tq2 10.2210/pdb3tq2/pdb RCSB RCSB067780 ? ? WWPDB D_1000067780 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-09-26 2 'Structure model' 1 1 2024-01-31 3 'Structure model' 1 2 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' citation 4 2 'Structure model' citation_author 5 2 'Structure model' database_2 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_site 8 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_database_2.pdbx_DOI' 14 2 'Structure model' '_database_2.pdbx_database_accession' 15 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3TQ2 _pdbx_database_status.recvd_initial_deposition_date 2011-09-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3K7Z 'Automated protein crystal structure determination using ELVES.' unspecified PDB 2WPY 'A coiled-coil motif that sequesters ions to the hydrophobic core.' unspecified PDB 1KYC 'Improving coiled-coil stability by optimizing ionic interactions.' unspecified PDB 1ZIJ 'Crystal structures of a single coiled-coil peptide in two oligomeric states reveal the basis for structural polymorphism.' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Geremia, S.' 1 'De March, M.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Analysis of the crystal structure of a parallel three-stranded coiled coil.' Proteins 91 1254 1260 2023 PSFGEY US 1097-0134 0867 ? 37501532 10.1002/prot.26557 1 'A coiled-coil motif that sequesters ions to the hydrophobic core.' Proc.Natl.Acad.Sci.USA 106 16950 16955 2009 PNASA6 US 0027-8424 0040 ? 19805097 10.1073/pnas.0907256106 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'de March, M.' 1 0000-0002-3447-957X primary 'Hickey, N.' 2 ? primary 'Geremia, S.' 3 0000-0002-0711-5113 1 'Hartmann, M.D.' 4 ? 1 'Ridderbusch, O.' 5 ? 1 'Zeth, K.' 6 ? 1 'Albrecht, R.' 7 ? 1 'Testa, O.' 8 ? 1 'Woolfson, D.N.' 9 ? 1 'Sauer, G.' 10 ? 1 'Dunin-Horkawicz, S.' 11 ? 1 'Lupas, A.N.' 12 ? 1 'Alvarez, B.H.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn KE1 3986.906 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 28 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)KVSALKEKVSALKEQFLMLMFKVSALKEKVSALKE' _entity_poly.pdbx_seq_one_letter_code_can XKVSALKEKVSALKEQFLMLMFKVSALKEKVSALKE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 LYS n 1 3 VAL n 1 4 SER n 1 5 ALA n 1 6 LEU n 1 7 LYS n 1 8 GLU n 1 9 LYS n 1 10 VAL n 1 11 SER n 1 12 ALA n 1 13 LEU n 1 14 LYS n 1 15 GLU n 1 16 GLN n 1 17 PHE n 1 18 LEU n 1 19 MET n 1 20 LEU n 1 21 MET n 1 22 PHE n 1 23 LYS n 1 24 VAL n 1 25 SER n 1 26 ALA n 1 27 LEU n 1 28 LYS n 1 29 GLU n 1 30 LYS n 1 31 VAL n 1 32 SER n 1 33 ALA n 1 34 LEU n 1 35 LYS n 1 36 GLU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific Synthetic _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'Solid Phase Chemistry' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 LYS 2 1 1 LYS LYS A . n A 1 3 VAL 3 2 2 VAL VAL A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 SER 11 10 10 SER SER A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 PHE 17 16 16 PHE PHE A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 MET 19 18 18 MET MET A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 MET 21 20 20 MET MET A . n A 1 22 PHE 22 21 21 PHE PHE A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 VAL 24 23 23 VAL VAL A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 SER 32 31 31 SER SER A . n A 1 33 ALA 33 32 32 ALA ALA A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 LYS 35 34 34 LYS LYS A . n A 1 36 GLU 36 35 35 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 36 1 SO4 SO4 A . C 3 HOH 1 37 1 HOH HOH A . C 3 HOH 2 38 2 HOH HOH A . C 3 HOH 3 39 3 HOH HOH A . C 3 HOH 4 40 4 HOH HOH A . C 3 HOH 5 41 5 HOH HOH A . C 3 HOH 6 42 6 HOH HOH A . C 3 HOH 7 43 7 HOH HOH A . C 3 HOH 8 44 8 HOH HOH A . C 3 HOH 9 45 9 HOH HOH A . C 3 HOH 10 46 10 HOH HOH A . C 3 HOH 11 47 11 HOH HOH A . C 3 HOH 12 48 12 HOH HOH A . C 3 HOH 13 49 13 HOH HOH A . C 3 HOH 14 50 14 HOH HOH A . C 3 HOH 15 51 15 HOH HOH A . C 3 HOH 16 52 16 HOH HOH A . C 3 HOH 17 53 17 HOH HOH A . C 3 HOH 18 54 18 HOH HOH A . C 3 HOH 19 55 19 HOH HOH A . C 3 HOH 20 56 20 HOH HOH A . C 3 HOH 21 57 21 HOH HOH A . C 3 HOH 22 58 22 HOH HOH A . C 3 HOH 23 59 23 HOH HOH A . C 3 HOH 24 60 24 HOH HOH A . C 3 HOH 25 61 25 HOH HOH A . C 3 HOH 26 62 26 HOH HOH A . C 3 HOH 27 63 28 HOH HOH A . C 3 HOH 28 64 29 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A SO4 36 ? O2 ? B SO4 1 O2 2 1 N 1 A SO4 36 ? O4 ? B SO4 1 O4 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5 ? 3 HKL-2000 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 3TQ2 _cell.length_a 22.365 _cell.length_b 22.365 _cell.length_c 51.007 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TQ2 _symmetry.space_group_name_H-M 'P 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3TQ2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.85 _exptl_crystal.density_percent_sol 33.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1M Hepes pH 7.5, 1.8-2.5M ammonium sulfate, 1.5-3% w/v PEG400, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'MAR CCD 165 mm' 2008-07-19 ? 2 CCD 'Nonius Kappa CCD' 2008-05-08 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si 111 CHANNEL' 'SINGLE WAVELENGTH' x-ray 2 1 M GRAPHITE 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.00 1.0 2 1.54 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'ELETTRA BEAMLINE 5.2R' ELETTRA 5.2R ? 1.00 2 'ROTATING ANODE' OTHER ? ? ? 1.54 # _reflns.entry_id 3TQ2 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.10 _reflns.number_obs 30622 _reflns.number_all 10855 _reflns.percent_possible_obs 95.0 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 1.10 _reflns_shell.d_res_low 1.14 _reflns_shell.percent_possible_all 85.4 _reflns_shell.Rmerge_I_obs 0.353 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.74 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 3TQ2 _refine.ls_number_reflns_obs 30622 _refine.ls_number_reflns_all 10855 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 1.10 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.188 _refine.ls_R_factor_all 0.21 _refine.ls_R_factor_R_work 0.158 _refine.ls_R_factor_R_free 0.185 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 543 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'a 35 Poly-Ala model' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1,2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 279 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 310 _refine_hist.d_res_high 1.10 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_angle_refined_deg 0.032 ? ? ? ? 'X-RAY DIFFRACTION' r_bond_refined_d 0.017 ? ? ? ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3TQ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3TQ2 _struct.title 'Merohedral twinning in protein crystals revealed a new synthetic three helix bundle motif' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TQ2 _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'Parallel three helix bundle, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3TQ2 _struct_ref.pdbx_db_accession 3TQ2 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 0 _struct_ref.pdbx_seq_one_letter_code XKVSALKEKVSALKEQFLMLMFKVSALKEKVSALKE _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TQ2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 36 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3TQ2 _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 35 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 35 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4790 ? 1 MORE -47 ? 1 'SSA (A^2)' 7170 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 11.1825000000 0.8660254038 -0.5000000000 0.0000000000 19.3686581556 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -11.1825000000 -0.8660254038 -0.5000000000 0.0000000000 19.3686581556 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 2 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 35 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 1 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 34 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 34 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id ACE _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id LYS _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ACE _struct_conn.ptnr1_auth_seq_id 0 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LYS _struct_conn.ptnr2_auth_seq_id 1 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.372 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 36 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 36' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LYS A 28 ? LYS A 27 . ? 3_465 ? 2 AC1 4 LYS A 28 ? LYS A 27 . ? 2_675 ? 3 AC1 4 LYS A 28 ? LYS A 27 . ? 1_555 ? 4 AC1 4 HOH C . ? HOH A 44 . ? 3_565 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 S _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SO4 _pdbx_validate_symm_contact.auth_seq_id_1 36 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 SO4 _pdbx_validate_symm_contact.auth_seq_id_2 36 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_465 _pdbx_validate_symm_contact.dist 1.40 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A SO4 36 ? B SO4 . 2 1 A SO4 36 ? B SO4 . 3 1 A HOH 54 ? C HOH . 4 1 A HOH 60 ? C HOH . 5 1 A HOH 61 ? C HOH . 6 1 A HOH 63 ? C HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 GLN N N N N 21 GLN CA C N S 22 GLN C C N N 23 GLN O O N N 24 GLN CB C N N 25 GLN CG C N N 26 GLN CD C N N 27 GLN OE1 O N N 28 GLN NE2 N N N 29 GLN OXT O N N 30 GLN H H N N 31 GLN H2 H N N 32 GLN HA H N N 33 GLN HB2 H N N 34 GLN HB3 H N N 35 GLN HG2 H N N 36 GLN HG3 H N N 37 GLN HE21 H N N 38 GLN HE22 H N N 39 GLN HXT H N N 40 GLU N N N N 41 GLU CA C N S 42 GLU C C N N 43 GLU O O N N 44 GLU CB C N N 45 GLU CG C N N 46 GLU CD C N N 47 GLU OE1 O N N 48 GLU OE2 O N N 49 GLU OXT O N N 50 GLU H H N N 51 GLU H2 H N N 52 GLU HA H N N 53 GLU HB2 H N N 54 GLU HB3 H N N 55 GLU HG2 H N N 56 GLU HG3 H N N 57 GLU HE2 H N N 58 GLU HXT H N N 59 HOH O O N N 60 HOH H1 H N N 61 HOH H2 H N N 62 LEU N N N N 63 LEU CA C N S 64 LEU C C N N 65 LEU O O N N 66 LEU CB C N N 67 LEU CG C N N 68 LEU CD1 C N N 69 LEU CD2 C N N 70 LEU OXT O N N 71 LEU H H N N 72 LEU H2 H N N 73 LEU HA H N N 74 LEU HB2 H N N 75 LEU HB3 H N N 76 LEU HG H N N 77 LEU HD11 H N N 78 LEU HD12 H N N 79 LEU HD13 H N N 80 LEU HD21 H N N 81 LEU HD22 H N N 82 LEU HD23 H N N 83 LEU HXT H N N 84 LYS N N N N 85 LYS CA C N S 86 LYS C C N N 87 LYS O O N N 88 LYS CB C N N 89 LYS CG C N N 90 LYS CD C N N 91 LYS CE C N N 92 LYS NZ N N N 93 LYS OXT O N N 94 LYS H H N N 95 LYS H2 H N N 96 LYS HA H N N 97 LYS HB2 H N N 98 LYS HB3 H N N 99 LYS HG2 H N N 100 LYS HG3 H N N 101 LYS HD2 H N N 102 LYS HD3 H N N 103 LYS HE2 H N N 104 LYS HE3 H N N 105 LYS HZ1 H N N 106 LYS HZ2 H N N 107 LYS HZ3 H N N 108 LYS HXT H N N 109 MET N N N N 110 MET CA C N S 111 MET C C N N 112 MET O O N N 113 MET CB C N N 114 MET CG C N N 115 MET SD S N N 116 MET CE C N N 117 MET OXT O N N 118 MET H H N N 119 MET H2 H N N 120 MET HA H N N 121 MET HB2 H N N 122 MET HB3 H N N 123 MET HG2 H N N 124 MET HG3 H N N 125 MET HE1 H N N 126 MET HE2 H N N 127 MET HE3 H N N 128 MET HXT H N N 129 PHE N N N N 130 PHE CA C N S 131 PHE C C N N 132 PHE O O N N 133 PHE CB C N N 134 PHE CG C Y N 135 PHE CD1 C Y N 136 PHE CD2 C Y N 137 PHE CE1 C Y N 138 PHE CE2 C Y N 139 PHE CZ C Y N 140 PHE OXT O N N 141 PHE H H N N 142 PHE H2 H N N 143 PHE HA H N N 144 PHE HB2 H N N 145 PHE HB3 H N N 146 PHE HD1 H N N 147 PHE HD2 H N N 148 PHE HE1 H N N 149 PHE HE2 H N N 150 PHE HZ H N N 151 PHE HXT H N N 152 SER N N N N 153 SER CA C N S 154 SER C C N N 155 SER O O N N 156 SER CB C N N 157 SER OG O N N 158 SER OXT O N N 159 SER H H N N 160 SER H2 H N N 161 SER HA H N N 162 SER HB2 H N N 163 SER HB3 H N N 164 SER HG H N N 165 SER HXT H N N 166 SO4 S S N N 167 SO4 O1 O N N 168 SO4 O2 O N N 169 SO4 O3 O N N 170 SO4 O4 O N N 171 VAL N N N N 172 VAL CA C N S 173 VAL C C N N 174 VAL O O N N 175 VAL CB C N N 176 VAL CG1 C N N 177 VAL CG2 C N N 178 VAL OXT O N N 179 VAL H H N N 180 VAL H2 H N N 181 VAL HA H N N 182 VAL HB H N N 183 VAL HG11 H N N 184 VAL HG12 H N N 185 VAL HG13 H N N 186 VAL HG21 H N N 187 VAL HG22 H N N 188 VAL HG23 H N N 189 VAL HXT H N N 190 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 GLN N CA sing N N 19 GLN N H sing N N 20 GLN N H2 sing N N 21 GLN CA C sing N N 22 GLN CA CB sing N N 23 GLN CA HA sing N N 24 GLN C O doub N N 25 GLN C OXT sing N N 26 GLN CB CG sing N N 27 GLN CB HB2 sing N N 28 GLN CB HB3 sing N N 29 GLN CG CD sing N N 30 GLN CG HG2 sing N N 31 GLN CG HG3 sing N N 32 GLN CD OE1 doub N N 33 GLN CD NE2 sing N N 34 GLN NE2 HE21 sing N N 35 GLN NE2 HE22 sing N N 36 GLN OXT HXT sing N N 37 GLU N CA sing N N 38 GLU N H sing N N 39 GLU N H2 sing N N 40 GLU CA C sing N N 41 GLU CA CB sing N N 42 GLU CA HA sing N N 43 GLU C O doub N N 44 GLU C OXT sing N N 45 GLU CB CG sing N N 46 GLU CB HB2 sing N N 47 GLU CB HB3 sing N N 48 GLU CG CD sing N N 49 GLU CG HG2 sing N N 50 GLU CG HG3 sing N N 51 GLU CD OE1 doub N N 52 GLU CD OE2 sing N N 53 GLU OE2 HE2 sing N N 54 GLU OXT HXT sing N N 55 HOH O H1 sing N N 56 HOH O H2 sing N N 57 LEU N CA sing N N 58 LEU N H sing N N 59 LEU N H2 sing N N 60 LEU CA C sing N N 61 LEU CA CB sing N N 62 LEU CA HA sing N N 63 LEU C O doub N N 64 LEU C OXT sing N N 65 LEU CB CG sing N N 66 LEU CB HB2 sing N N 67 LEU CB HB3 sing N N 68 LEU CG CD1 sing N N 69 LEU CG CD2 sing N N 70 LEU CG HG sing N N 71 LEU CD1 HD11 sing N N 72 LEU CD1 HD12 sing N N 73 LEU CD1 HD13 sing N N 74 LEU CD2 HD21 sing N N 75 LEU CD2 HD22 sing N N 76 LEU CD2 HD23 sing N N 77 LEU OXT HXT sing N N 78 LYS N CA sing N N 79 LYS N H sing N N 80 LYS N H2 sing N N 81 LYS CA C sing N N 82 LYS CA CB sing N N 83 LYS CA HA sing N N 84 LYS C O doub N N 85 LYS C OXT sing N N 86 LYS CB CG sing N N 87 LYS CB HB2 sing N N 88 LYS CB HB3 sing N N 89 LYS CG CD sing N N 90 LYS CG HG2 sing N N 91 LYS CG HG3 sing N N 92 LYS CD CE sing N N 93 LYS CD HD2 sing N N 94 LYS CD HD3 sing N N 95 LYS CE NZ sing N N 96 LYS CE HE2 sing N N 97 LYS CE HE3 sing N N 98 LYS NZ HZ1 sing N N 99 LYS NZ HZ2 sing N N 100 LYS NZ HZ3 sing N N 101 LYS OXT HXT sing N N 102 MET N CA sing N N 103 MET N H sing N N 104 MET N H2 sing N N 105 MET CA C sing N N 106 MET CA CB sing N N 107 MET CA HA sing N N 108 MET C O doub N N 109 MET C OXT sing N N 110 MET CB CG sing N N 111 MET CB HB2 sing N N 112 MET CB HB3 sing N N 113 MET CG SD sing N N 114 MET CG HG2 sing N N 115 MET CG HG3 sing N N 116 MET SD CE sing N N 117 MET CE HE1 sing N N 118 MET CE HE2 sing N N 119 MET CE HE3 sing N N 120 MET OXT HXT sing N N 121 PHE N CA sing N N 122 PHE N H sing N N 123 PHE N H2 sing N N 124 PHE CA C sing N N 125 PHE CA CB sing N N 126 PHE CA HA sing N N 127 PHE C O doub N N 128 PHE C OXT sing N N 129 PHE CB CG sing N N 130 PHE CB HB2 sing N N 131 PHE CB HB3 sing N N 132 PHE CG CD1 doub Y N 133 PHE CG CD2 sing Y N 134 PHE CD1 CE1 sing Y N 135 PHE CD1 HD1 sing N N 136 PHE CD2 CE2 doub Y N 137 PHE CD2 HD2 sing N N 138 PHE CE1 CZ doub Y N 139 PHE CE1 HE1 sing N N 140 PHE CE2 CZ sing Y N 141 PHE CE2 HE2 sing N N 142 PHE CZ HZ sing N N 143 PHE OXT HXT sing N N 144 SER N CA sing N N 145 SER N H sing N N 146 SER N H2 sing N N 147 SER CA C sing N N 148 SER CA CB sing N N 149 SER CA HA sing N N 150 SER C O doub N N 151 SER C OXT sing N N 152 SER CB OG sing N N 153 SER CB HB2 sing N N 154 SER CB HB3 sing N N 155 SER OG HG sing N N 156 SER OXT HXT sing N N 157 SO4 S O1 doub N N 158 SO4 S O2 doub N N 159 SO4 S O3 sing N N 160 SO4 S O4 sing N N 161 VAL N CA sing N N 162 VAL N H sing N N 163 VAL N H2 sing N N 164 VAL CA C sing N N 165 VAL CA CB sing N N 166 VAL CA HA sing N N 167 VAL C O doub N N 168 VAL C OXT sing N N 169 VAL CB CG1 sing N N 170 VAL CB CG2 sing N N 171 VAL CB HB sing N N 172 VAL CG1 HG11 sing N N 173 VAL CG1 HG12 sing N N 174 VAL CG1 HG13 sing N N 175 VAL CG2 HG21 sing N N 176 VAL CG2 HG22 sing N N 177 VAL CG2 HG23 sing N N 178 VAL OXT HXT sing N N 179 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details '35-residue polyalanine model' # _atom_sites.entry_id 3TQ2 _atom_sites.fract_transf_matrix[1][1] 0.044713 _atom_sites.fract_transf_matrix[1][2] 0.025815 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.051630 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019605 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_