data_3TR6 # _entry.id 3TR6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3TR6 RCSB RCSB067820 WWPDB D_1000067820 # _pdbx_database_status.entry_id 3TR6 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-09-09 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cheung, J.' 1 'Franklin, M.C.' 2 'Rudolph, M.' 3 'Cassidy, M.' 4 'Gary, E.' 5 'Burshteyn, F.' 6 'Love, J.' 7 # _citation.id primary _citation.title 'Structural genomics for drug design against the pathogen Coxiella burnetii.' _citation.journal_abbrev Proteins _citation.journal_volume 83 _citation.page_first 2124 _citation.page_last 2136 _citation.year 2015 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26033498 _citation.pdbx_database_id_DOI 10.1002/prot.24841 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Franklin, M.C.' 1 primary 'Cheung, J.' 2 primary 'Rudolph, M.J.' 3 primary 'Burshteyn, F.' 4 primary 'Cassidy, M.' 5 primary 'Gary, E.' 6 primary 'Hillerich, B.' 7 primary 'Yao, Z.K.' 8 primary 'Carlier, P.R.' 9 primary 'Totrov, M.' 10 primary 'Love, J.D.' 11 # _cell.length_a 83.686 _cell.length_b 83.686 _cell.length_c 212.910 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3TR6 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 3TR6 _symmetry.Int_Tables_number 178 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man O-methyltransferase 25403.262 1 2.1.1.- ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 3 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 4 water nat water 18.015 101 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)SINTTLLTPELYQYLLQVSLREPPLLAELREETTRSFSTYA(MSE)QTAPEQAQLLALLVKL(MSE)QAKKV IDIGTFTGYSAIA(MSE)GLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI YIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVD(MSE)ILIPIGDGLTL ARKKS ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMSINTTLLTPELYQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAI AMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEES LKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKKS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 SER n 1 6 ILE n 1 7 ASN n 1 8 THR n 1 9 THR n 1 10 LEU n 1 11 LEU n 1 12 THR n 1 13 PRO n 1 14 GLU n 1 15 LEU n 1 16 TYR n 1 17 GLN n 1 18 TYR n 1 19 LEU n 1 20 LEU n 1 21 GLN n 1 22 VAL n 1 23 SER n 1 24 LEU n 1 25 ARG n 1 26 GLU n 1 27 PRO n 1 28 PRO n 1 29 LEU n 1 30 LEU n 1 31 ALA n 1 32 GLU n 1 33 LEU n 1 34 ARG n 1 35 GLU n 1 36 GLU n 1 37 THR n 1 38 THR n 1 39 ARG n 1 40 SER n 1 41 PHE n 1 42 SER n 1 43 THR n 1 44 TYR n 1 45 ALA n 1 46 MSE n 1 47 GLN n 1 48 THR n 1 49 ALA n 1 50 PRO n 1 51 GLU n 1 52 GLN n 1 53 ALA n 1 54 GLN n 1 55 LEU n 1 56 LEU n 1 57 ALA n 1 58 LEU n 1 59 LEU n 1 60 VAL n 1 61 LYS n 1 62 LEU n 1 63 MSE n 1 64 GLN n 1 65 ALA n 1 66 LYS n 1 67 LYS n 1 68 VAL n 1 69 ILE n 1 70 ASP n 1 71 ILE n 1 72 GLY n 1 73 THR n 1 74 PHE n 1 75 THR n 1 76 GLY n 1 77 TYR n 1 78 SER n 1 79 ALA n 1 80 ILE n 1 81 ALA n 1 82 MSE n 1 83 GLY n 1 84 LEU n 1 85 ALA n 1 86 LEU n 1 87 PRO n 1 88 LYS n 1 89 ASP n 1 90 GLY n 1 91 THR n 1 92 LEU n 1 93 ILE n 1 94 THR n 1 95 CYS n 1 96 ASP n 1 97 VAL n 1 98 ASP n 1 99 GLU n 1 100 LYS n 1 101 SER n 1 102 THR n 1 103 ALA n 1 104 LEU n 1 105 ALA n 1 106 LYS n 1 107 GLU n 1 108 TYR n 1 109 TRP n 1 110 GLU n 1 111 LYS n 1 112 ALA n 1 113 GLY n 1 114 LEU n 1 115 SER n 1 116 ASP n 1 117 LYS n 1 118 ILE n 1 119 GLY n 1 120 LEU n 1 121 ARG n 1 122 LEU n 1 123 SER n 1 124 PRO n 1 125 ALA n 1 126 LYS n 1 127 ASP n 1 128 THR n 1 129 LEU n 1 130 ALA n 1 131 GLU n 1 132 LEU n 1 133 ILE n 1 134 HIS n 1 135 ALA n 1 136 GLY n 1 137 GLN n 1 138 ALA n 1 139 TRP n 1 140 GLN n 1 141 TYR n 1 142 ASP n 1 143 LEU n 1 144 ILE n 1 145 TYR n 1 146 ILE n 1 147 ASP n 1 148 ALA n 1 149 ASP n 1 150 LYS n 1 151 ALA n 1 152 ASN n 1 153 THR n 1 154 ASP n 1 155 LEU n 1 156 TYR n 1 157 TYR n 1 158 GLU n 1 159 GLU n 1 160 SER n 1 161 LEU n 1 162 LYS n 1 163 LEU n 1 164 LEU n 1 165 ARG n 1 166 GLU n 1 167 GLY n 1 168 GLY n 1 169 LEU n 1 170 ILE n 1 171 ALA n 1 172 VAL n 1 173 ASP n 1 174 ASN n 1 175 VAL n 1 176 LEU n 1 177 ARG n 1 178 ARG n 1 179 GLY n 1 180 GLN n 1 181 VAL n 1 182 ALA n 1 183 ASP n 1 184 GLU n 1 185 GLU n 1 186 ASN n 1 187 GLN n 1 188 SER n 1 189 GLU n 1 190 ASN n 1 191 ASN n 1 192 GLN n 1 193 LEU n 1 194 ILE n 1 195 ARG n 1 196 LEU n 1 197 PHE n 1 198 ASN n 1 199 GLN n 1 200 LYS n 1 201 VAL n 1 202 TYR n 1 203 LYS n 1 204 ASP n 1 205 GLU n 1 206 ARG n 1 207 VAL n 1 208 ASP n 1 209 MSE n 1 210 ILE n 1 211 LEU n 1 212 ILE n 1 213 PRO n 1 214 ILE n 1 215 GLY n 1 216 ASP n 1 217 GLY n 1 218 LEU n 1 219 THR n 1 220 LEU n 1 221 ALA n 1 222 ARG n 1 223 LYS n 1 224 LYS n 1 225 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CBU_0924 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RSA493 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Coxiella burnetii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 777 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q83D22_COXBU _struct_ref.pdbx_db_accession Q83D22 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSINTTLLTPELYQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMG LALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKL LREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKKS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TR6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 225 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q83D22 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 222 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 222 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3TR6 SER A 1 ? UNP Q83D22 ? ? 'EXPRESSION TAG' -2 1 1 3TR6 ASN A 2 ? UNP Q83D22 ? ? 'EXPRESSION TAG' -1 2 1 3TR6 ALA A 3 ? UNP Q83D22 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3TR6 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.24 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 70.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'sitting drop' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pdbx_details '0.1M Tris pH 8.5, 0.01M Nickel (II) chloride, 20% PEG MME 2000, sitting drop, temperature 295K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2011-07-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'VARIMAX HF' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3TR6 _reflns.d_resolution_high 2.700 _reflns.d_resolution_low 30.000 _reflns.number_obs 12763 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_netI_over_sigmaI 11.000 _reflns.pdbx_chi_squared 1.080 _reflns.pdbx_redundancy 13.200 _reflns.percent_possible_obs 98.100 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.number_all 13010 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.700 2.750 ? ? ? 0.270 ? ? 0.470 6.400 ? 566 91.100 1 1 2.750 2.800 ? ? ? 0.264 ? ? 0.525 7.100 ? 589 93.000 2 1 2.800 2.850 ? ? ? 0.251 ? ? 0.524 8.100 ? 581 93.700 3 1 2.850 2.910 ? ? ? 0.232 ? ? 0.548 9.000 ? 607 95.600 4 1 2.910 2.970 ? ? ? 0.220 ? ? 0.517 10.500 ? 604 95.600 5 1 2.970 3.040 ? ? ? 0.210 ? ? 0.533 12.600 ? 615 97.600 6 1 3.040 3.120 ? ? ? 0.192 ? ? 0.602 13.500 ? 626 98.000 7 1 3.120 3.200 ? ? ? 0.150 ? ? 0.665 13.500 ? 605 97.900 8 1 3.200 3.290 ? ? ? 0.137 ? ? 0.768 13.300 ? 626 98.900 9 1 3.290 3.400 ? ? ? 0.117 ? ? 0.864 13.300 ? 645 99.200 10 1 3.400 3.520 ? ? ? 0.101 ? ? 0.981 13.300 ? 649 99.800 11 1 3.520 3.660 ? ? ? 0.095 ? ? 1.142 13.800 ? 633 100.000 12 1 3.660 3.830 ? ? ? 0.084 ? ? 1.313 14.000 ? 658 100.000 13 1 3.830 4.030 ? ? ? 0.080 ? ? 1.366 14.800 ? 637 100.000 14 1 4.030 4.280 ? ? ? 0.068 ? ? 1.524 15.000 ? 658 100.000 15 1 4.280 4.610 ? ? ? 0.064 ? ? 1.651 15.900 ? 650 100.000 16 1 4.610 5.070 ? ? ? 0.058 ? ? 1.631 16.200 ? 665 100.000 17 1 5.070 5.800 ? ? ? 0.058 ? ? 1.245 17.200 ? 679 100.000 18 1 5.800 7.300 ? ? ? 0.053 ? ? 1.108 17.200 ? 697 100.000 19 1 7.300 30.000 ? ? ? 0.040 ? ? 1.545 15.700 ? 773 99.900 20 1 # _refine.entry_id 3TR6 _refine.ls_d_res_high 2.70 _refine.ls_d_res_low 29.8450 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.6500 _refine.ls_number_reflns_obs 12694 _refine.ls_number_reflns_all 13628 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.2037 _refine.ls_R_factor_obs 0.2037 _refine.ls_R_factor_R_work 0.2016 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2490 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8400 _refine.ls_number_reflns_R_free 614 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 41.5431 _refine.solvent_model_param_bsol 22.3420 _refine.solvent_model_param_ksol 0.3020 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -3.0558 _refine.aniso_B[2][2] -3.0558 _refine.aniso_B[3][3] 6.1115 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3900 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9500 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8477 _refine.B_iso_max 124.680 _refine.B_iso_min 16.900 _refine.pdbx_overall_phase_error 20.8400 _refine.occupancy_max 1.000 _refine.occupancy_min 0.810 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1748 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 1876 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 29.8450 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1800 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2439 0.814 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 288 0.056 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 308 0.002 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 678 14.270 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.70 2.9578 4 92.0000 2748 . 0.2652 0.3606 . 162 . 2910 . . 'X-RAY DIFFRACTION' 2.9578 3.3853 4 98.0000 2957 . 0.2202 0.2750 . 167 . 3124 . . 'X-RAY DIFFRACTION' 3.3853 4.2632 4 100.0000 3087 . 0.1878 0.2197 . 137 . 3224 . . 'X-RAY DIFFRACTION' 4.2632 29.845 4 100.0000 3288 . 0.1872 0.2214 . 148 . 3436 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3TR6 _struct.title 'Structure of a O-methyltransferase from Coxiella burnetii' _struct.pdbx_descriptor 'O-methyltransferase (E.C.2.1.1.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TR6 _struct_keywords.text 'Cellular processes, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 12 ? VAL A 22 ? THR A 9 VAL A 19 1 ? 11 HELX_P HELX_P2 2 PRO A 27 ? PHE A 41 ? PRO A 24 PHE A 38 1 ? 15 HELX_P HELX_P3 3 THR A 43 ? GLN A 47 ? THR A 40 GLN A 44 5 ? 5 HELX_P HELX_P4 4 ALA A 49 ? GLN A 64 ? ALA A 46 GLN A 61 1 ? 16 HELX_P HELX_P5 5 GLY A 76 ? LEU A 84 ? GLY A 73 LEU A 81 1 ? 9 HELX_P HELX_P6 6 ASP A 98 ? ALA A 112 ? ASP A 95 ALA A 109 1 ? 15 HELX_P HELX_P7 7 PRO A 124 ? HIS A 134 ? PRO A 121 HIS A 131 1 ? 11 HELX_P HELX_P8 8 ASP A 149 ? ALA A 151 ? ASP A 146 ALA A 148 5 ? 3 HELX_P HELX_P9 9 ASN A 152 ? LEU A 163 ? ASN A 149 LEU A 160 1 ? 12 HELX_P HELX_P10 10 LEU A 176 ? ASP A 183 ? LEU A 173 ASP A 180 5 ? 8 HELX_P HELX_P11 11 SER A 188 ? ASP A 204 ? SER A 185 ASP A 201 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 4 C ? ? ? 1_555 A SER 5 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A ALA 45 C ? ? ? 1_555 A MSE 46 N ? ? A ALA 42 A MSE 43 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A MSE 46 C ? ? ? 1_555 A GLN 47 N ? ? A MSE 43 A GLN 44 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A LEU 62 C ? ? ? 1_555 A MSE 63 N ? ? A LEU 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A MSE 63 C ? ? ? 1_555 A GLN 64 N ? ? A MSE 60 A GLN 61 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A ALA 81 C ? ? ? 1_555 A MSE 82 N ? ? A ALA 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? A MSE 82 C ? ? ? 1_555 A GLY 83 N ? ? A MSE 79 A GLY 80 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A ASP 208 C ? ? ? 1_555 A MSE 209 N ? ? A ASP 205 A MSE 206 1_555 ? ? ? ? ? ? ? 1.326 ? covale9 covale ? ? A MSE 209 C ? ? ? 1_555 A ILE 210 N ? ? A MSE 206 A ILE 207 1_555 ? ? ? ? ? ? ? 1.325 ? metalc1 metalc ? ? A ASP 173 OD2 ? ? ? 1_555 B NI . NI ? ? A ASP 170 A NI 223 1_555 ? ? ? ? ? ? ? 2.506 ? metalc2 metalc ? ? A ASN 174 ND2 ? ? ? 1_555 B NI . NI ? ? A ASN 171 A NI 223 1_555 ? ? ? ? ? ? ? 2.522 ? metalc3 metalc ? ? A ASP 147 OD2 ? ? ? 1_555 B NI . NI ? ? A ASP 144 A NI 223 1_555 ? ? ? ? ? ? ? 2.577 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 5 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 2 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ILE _struct_mon_prot_cis.pdbx_label_seq_id_2 6 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ILE _struct_mon_prot_cis.pdbx_auth_seq_id_2 3 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 11.71 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 118 ? LEU A 122 ? ILE A 115 LEU A 119 A 2 THR A 91 ? ASP A 96 ? THR A 88 ASP A 93 A 3 LYS A 67 ? ILE A 71 ? LYS A 64 ILE A 68 A 4 TYR A 141 ? ILE A 146 ? TYR A 138 ILE A 143 A 5 LEU A 164 ? ASP A 173 ? LEU A 161 ASP A 170 A 6 LEU A 218 ? LYS A 223 ? LEU A 215 LYS A 220 A 7 VAL A 207 ? ILE A 212 ? VAL A 204 ILE A 209 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 121 ? O ARG A 118 N THR A 94 ? N THR A 91 A 2 3 O CYS A 95 ? O CYS A 92 N ASP A 70 ? N ASP A 67 A 3 4 N ILE A 71 ? N ILE A 68 O TYR A 145 ? O TYR A 142 A 4 5 N ILE A 146 ? N ILE A 143 O ALA A 171 ? O ALA A 168 A 5 6 N VAL A 172 ? N VAL A 169 O THR A 219 ? O THR A 216 A 6 7 O ARG A 222 ? O ARG A 219 N ASP A 208 ? N ASP A 205 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NI A 223' AC2 Software ? ? ? ? 19 'BINDING SITE FOR RESIDUE SAH A 224' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 147 ? ASP A 144 . ? 1_555 ? 2 AC1 4 ASP A 173 ? ASP A 170 . ? 1_555 ? 3 AC1 4 ASN A 174 ? ASN A 171 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 258 . ? 1_555 ? 5 AC2 19 MSE A 46 ? MSE A 43 . ? 1_555 ? 6 AC2 19 GLN A 47 ? GLN A 44 . ? 1_555 ? 7 AC2 19 THR A 48 ? THR A 45 . ? 1_555 ? 8 AC2 19 GLY A 72 ? GLY A 69 . ? 1_555 ? 9 AC2 19 PHE A 74 ? PHE A 71 . ? 1_555 ? 10 AC2 19 TYR A 77 ? TYR A 74 . ? 1_555 ? 11 AC2 19 SER A 78 ? SER A 75 . ? 1_555 ? 12 AC2 19 ASP A 96 ? ASP A 93 . ? 1_555 ? 13 AC2 19 VAL A 97 ? VAL A 94 . ? 1_555 ? 14 AC2 19 PRO A 124 ? PRO A 121 . ? 1_555 ? 15 AC2 19 ALA A 125 ? ALA A 122 . ? 1_555 ? 16 AC2 19 ASP A 147 ? ASP A 144 . ? 1_555 ? 17 AC2 19 ALA A 148 ? ALA A 145 . ? 1_555 ? 18 AC2 19 ASP A 149 ? ASP A 146 . ? 1_555 ? 19 AC2 19 TYR A 156 ? TYR A 153 . ? 1_555 ? 20 AC2 19 HOH D . ? HOH A 232 . ? 1_555 ? 21 AC2 19 HOH D . ? HOH A 259 . ? 1_555 ? 22 AC2 19 HOH D . ? HOH A 292 . ? 1_555 ? 23 AC2 19 HOH D . ? HOH A 297 . ? 1_555 ? # _atom_sites.entry_id 3TR6 _atom_sites.fract_transf_matrix[1][1] 0.011949 _atom_sites.fract_transf_matrix[1][2] 0.006899 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013798 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004697 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NI O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 SER 5 2 2 SER SER A . n A 1 6 ILE 6 3 3 ILE ILE A . n A 1 7 ASN 7 4 4 ASN ASN A . n A 1 8 THR 8 5 5 THR THR A . n A 1 9 THR 9 6 6 THR THR A . n A 1 10 LEU 10 7 7 LEU LEU A . n A 1 11 LEU 11 8 8 LEU LEU A . n A 1 12 THR 12 9 9 THR THR A . n A 1 13 PRO 13 10 10 PRO PRO A . n A 1 14 GLU 14 11 11 GLU GLU A . n A 1 15 LEU 15 12 12 LEU LEU A . n A 1 16 TYR 16 13 13 TYR TYR A . n A 1 17 GLN 17 14 14 GLN GLN A . n A 1 18 TYR 18 15 15 TYR TYR A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 GLN 21 18 18 GLN GLN A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 SER 23 20 20 SER SER A . n A 1 24 LEU 24 21 21 LEU LEU A . n A 1 25 ARG 25 22 22 ARG ARG A . n A 1 26 GLU 26 23 23 GLU GLU A . n A 1 27 PRO 27 24 24 PRO PRO A . n A 1 28 PRO 28 25 25 PRO PRO A . n A 1 29 LEU 29 26 26 LEU LEU A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 GLU 32 29 29 GLU GLU A . n A 1 33 LEU 33 30 30 LEU LEU A . n A 1 34 ARG 34 31 31 ARG ARG A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 GLU 36 33 33 GLU GLU A . n A 1 37 THR 37 34 34 THR THR A . n A 1 38 THR 38 35 35 THR THR A . n A 1 39 ARG 39 36 36 ARG ARG A . n A 1 40 SER 40 37 37 SER SER A . n A 1 41 PHE 41 38 38 PHE PHE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 THR 43 40 40 THR THR A . n A 1 44 TYR 44 41 41 TYR TYR A . n A 1 45 ALA 45 42 42 ALA ALA A . n A 1 46 MSE 46 43 43 MSE MSE A . n A 1 47 GLN 47 44 44 GLN GLN A . n A 1 48 THR 48 45 45 THR THR A . n A 1 49 ALA 49 46 46 ALA ALA A . n A 1 50 PRO 50 47 47 PRO PRO A . n A 1 51 GLU 51 48 48 GLU GLU A . n A 1 52 GLN 52 49 49 GLN GLN A . n A 1 53 ALA 53 50 50 ALA ALA A . n A 1 54 GLN 54 51 51 GLN GLN A . n A 1 55 LEU 55 52 52 LEU LEU A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 ALA 57 54 54 ALA ALA A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 LEU 59 56 56 LEU LEU A . n A 1 60 VAL 60 57 57 VAL VAL A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 MSE 63 60 60 MSE MSE A . n A 1 64 GLN 64 61 61 GLN GLN A . n A 1 65 ALA 65 62 62 ALA ALA A . n A 1 66 LYS 66 63 63 LYS LYS A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ILE 69 66 66 ILE ILE A . n A 1 70 ASP 70 67 67 ASP ASP A . n A 1 71 ILE 71 68 68 ILE ILE A . n A 1 72 GLY 72 69 69 GLY GLY A . n A 1 73 THR 73 70 70 THR THR A . n A 1 74 PHE 74 71 71 PHE PHE A . n A 1 75 THR 75 72 72 THR THR A . n A 1 76 GLY 76 73 73 GLY GLY A . n A 1 77 TYR 77 74 74 TYR TYR A . n A 1 78 SER 78 75 75 SER SER A . n A 1 79 ALA 79 76 76 ALA ALA A . n A 1 80 ILE 80 77 77 ILE ILE A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 MSE 82 79 79 MSE MSE A . n A 1 83 GLY 83 80 80 GLY GLY A . n A 1 84 LEU 84 81 81 LEU LEU A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 LEU 86 83 83 LEU LEU A . n A 1 87 PRO 87 84 84 PRO PRO A . n A 1 88 LYS 88 85 85 LYS LYS A . n A 1 89 ASP 89 86 86 ASP ASP A . n A 1 90 GLY 90 87 87 GLY GLY A . n A 1 91 THR 91 88 88 THR THR A . n A 1 92 LEU 92 89 89 LEU LEU A . n A 1 93 ILE 93 90 90 ILE ILE A . n A 1 94 THR 94 91 91 THR THR A . n A 1 95 CYS 95 92 92 CYS CYS A . n A 1 96 ASP 96 93 93 ASP ASP A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 ASP 98 95 95 ASP ASP A . n A 1 99 GLU 99 96 96 GLU GLU A . n A 1 100 LYS 100 97 97 LYS LYS A . n A 1 101 SER 101 98 98 SER SER A . n A 1 102 THR 102 99 99 THR THR A . n A 1 103 ALA 103 100 100 ALA ALA A . n A 1 104 LEU 104 101 101 LEU LEU A . n A 1 105 ALA 105 102 102 ALA ALA A . n A 1 106 LYS 106 103 103 LYS LYS A . n A 1 107 GLU 107 104 104 GLU GLU A . n A 1 108 TYR 108 105 105 TYR TYR A . n A 1 109 TRP 109 106 106 TRP TRP A . n A 1 110 GLU 110 107 107 GLU GLU A . n A 1 111 LYS 111 108 108 LYS LYS A . n A 1 112 ALA 112 109 109 ALA ALA A . n A 1 113 GLY 113 110 110 GLY GLY A . n A 1 114 LEU 114 111 111 LEU LEU A . n A 1 115 SER 115 112 112 SER SER A . n A 1 116 ASP 116 113 113 ASP ASP A . n A 1 117 LYS 117 114 114 LYS LYS A . n A 1 118 ILE 118 115 115 ILE ILE A . n A 1 119 GLY 119 116 116 GLY GLY A . n A 1 120 LEU 120 117 117 LEU LEU A . n A 1 121 ARG 121 118 118 ARG ARG A . n A 1 122 LEU 122 119 119 LEU LEU A . n A 1 123 SER 123 120 120 SER SER A . n A 1 124 PRO 124 121 121 PRO PRO A . n A 1 125 ALA 125 122 122 ALA ALA A . n A 1 126 LYS 126 123 123 LYS LYS A . n A 1 127 ASP 127 124 124 ASP ASP A . n A 1 128 THR 128 125 125 THR THR A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 ALA 130 127 127 ALA ALA A . n A 1 131 GLU 131 128 128 GLU GLU A . n A 1 132 LEU 132 129 129 LEU LEU A . n A 1 133 ILE 133 130 130 ILE ILE A . n A 1 134 HIS 134 131 131 HIS HIS A . n A 1 135 ALA 135 132 132 ALA ALA A . n A 1 136 GLY 136 133 133 GLY GLY A . n A 1 137 GLN 137 134 134 GLN GLN A . n A 1 138 ALA 138 135 135 ALA ALA A . n A 1 139 TRP 139 136 136 TRP TRP A . n A 1 140 GLN 140 137 137 GLN GLN A . n A 1 141 TYR 141 138 138 TYR TYR A . n A 1 142 ASP 142 139 139 ASP ASP A . n A 1 143 LEU 143 140 140 LEU LEU A . n A 1 144 ILE 144 141 141 ILE ILE A . n A 1 145 TYR 145 142 142 TYR TYR A . n A 1 146 ILE 146 143 143 ILE ILE A . n A 1 147 ASP 147 144 144 ASP ASP A . n A 1 148 ALA 148 145 145 ALA ALA A . n A 1 149 ASP 149 146 146 ASP ASP A . n A 1 150 LYS 150 147 147 LYS LYS A . n A 1 151 ALA 151 148 148 ALA ALA A . n A 1 152 ASN 152 149 149 ASN ASN A . n A 1 153 THR 153 150 150 THR THR A . n A 1 154 ASP 154 151 151 ASP ASP A . n A 1 155 LEU 155 152 152 LEU LEU A . n A 1 156 TYR 156 153 153 TYR TYR A . n A 1 157 TYR 157 154 154 TYR TYR A . n A 1 158 GLU 158 155 155 GLU GLU A . n A 1 159 GLU 159 156 156 GLU GLU A . n A 1 160 SER 160 157 157 SER SER A . n A 1 161 LEU 161 158 158 LEU LEU A . n A 1 162 LYS 162 159 159 LYS LYS A . n A 1 163 LEU 163 160 160 LEU LEU A . n A 1 164 LEU 164 161 161 LEU LEU A . n A 1 165 ARG 165 162 162 ARG ARG A . n A 1 166 GLU 166 163 163 GLU GLU A . n A 1 167 GLY 167 164 164 GLY GLY A . n A 1 168 GLY 168 165 165 GLY GLY A . n A 1 169 LEU 169 166 166 LEU LEU A . n A 1 170 ILE 170 167 167 ILE ILE A . n A 1 171 ALA 171 168 168 ALA ALA A . n A 1 172 VAL 172 169 169 VAL VAL A . n A 1 173 ASP 173 170 170 ASP ASP A . n A 1 174 ASN 174 171 171 ASN ASN A . n A 1 175 VAL 175 172 172 VAL VAL A . n A 1 176 LEU 176 173 173 LEU LEU A . n A 1 177 ARG 177 174 174 ARG ARG A . n A 1 178 ARG 178 175 175 ARG ARG A . n A 1 179 GLY 179 176 176 GLY GLY A . n A 1 180 GLN 180 177 177 GLN GLN A . n A 1 181 VAL 181 178 178 VAL VAL A . n A 1 182 ALA 182 179 179 ALA ALA A . n A 1 183 ASP 183 180 180 ASP ASP A . n A 1 184 GLU 184 181 181 GLU GLU A . n A 1 185 GLU 185 182 182 GLU GLU A . n A 1 186 ASN 186 183 183 ASN ASN A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 SER 188 185 185 SER SER A . n A 1 189 GLU 189 186 186 GLU GLU A . n A 1 190 ASN 190 187 187 ASN ASN A . n A 1 191 ASN 191 188 188 ASN ASN A . n A 1 192 GLN 192 189 189 GLN GLN A . n A 1 193 LEU 193 190 190 LEU LEU A . n A 1 194 ILE 194 191 191 ILE ILE A . n A 1 195 ARG 195 192 192 ARG ARG A . n A 1 196 LEU 196 193 193 LEU LEU A . n A 1 197 PHE 197 194 194 PHE PHE A . n A 1 198 ASN 198 195 195 ASN ASN A . n A 1 199 GLN 199 196 196 GLN GLN A . n A 1 200 LYS 200 197 197 LYS LYS A . n A 1 201 VAL 201 198 198 VAL VAL A . n A 1 202 TYR 202 199 199 TYR TYR A . n A 1 203 LYS 203 200 200 LYS LYS A . n A 1 204 ASP 204 201 201 ASP ASP A . n A 1 205 GLU 205 202 202 GLU GLU A . n A 1 206 ARG 206 203 203 ARG ARG A . n A 1 207 VAL 207 204 204 VAL VAL A . n A 1 208 ASP 208 205 205 ASP ASP A . n A 1 209 MSE 209 206 206 MSE MSE A . n A 1 210 ILE 210 207 207 ILE ILE A . n A 1 211 LEU 211 208 208 LEU LEU A . n A 1 212 ILE 212 209 209 ILE ILE A . n A 1 213 PRO 213 210 210 PRO PRO A . n A 1 214 ILE 214 211 211 ILE ILE A . n A 1 215 GLY 215 212 212 GLY GLY A . n A 1 216 ASP 216 213 213 ASP ASP A . n A 1 217 GLY 217 214 214 GLY GLY A . n A 1 218 LEU 218 215 215 LEU LEU A . n A 1 219 THR 219 216 216 THR THR A . n A 1 220 LEU 220 217 217 LEU LEU A . n A 1 221 ALA 221 218 218 ALA ALA A . n A 1 222 ARG 222 219 219 ARG ARG A . n A 1 223 LYS 223 220 220 LYS LYS A . n A 1 224 LYS 224 221 221 LYS LYS A . n A 1 225 SER 225 222 222 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 223 1 NI NI A . C 3 SAH 1 224 1 SAH SAH A . D 4 HOH 1 225 1 HOH HOH A . D 4 HOH 2 226 2 HOH HOH A . D 4 HOH 3 227 3 HOH HOH A . D 4 HOH 4 228 4 HOH HOH A . D 4 HOH 5 229 5 HOH HOH A . D 4 HOH 6 230 6 HOH HOH A . D 4 HOH 7 231 7 HOH HOH A . D 4 HOH 8 232 8 HOH HOH A . D 4 HOH 9 233 9 HOH HOH A . D 4 HOH 10 234 10 HOH HOH A . D 4 HOH 11 235 11 HOH HOH A . D 4 HOH 12 236 12 HOH HOH A . D 4 HOH 13 237 13 HOH HOH A . D 4 HOH 14 238 14 HOH HOH A . D 4 HOH 15 239 15 HOH HOH A . D 4 HOH 16 240 16 HOH HOH A . D 4 HOH 17 241 17 HOH HOH A . D 4 HOH 18 242 18 HOH HOH A . D 4 HOH 19 243 19 HOH HOH A . D 4 HOH 20 244 20 HOH HOH A . D 4 HOH 21 245 21 HOH HOH A . D 4 HOH 22 246 22 HOH HOH A . D 4 HOH 23 247 23 HOH HOH A . D 4 HOH 24 248 24 HOH HOH A . D 4 HOH 25 249 25 HOH HOH A . D 4 HOH 26 250 26 HOH HOH A . D 4 HOH 27 251 27 HOH HOH A . D 4 HOH 28 252 28 HOH HOH A . D 4 HOH 29 253 29 HOH HOH A . D 4 HOH 30 254 30 HOH HOH A . D 4 HOH 31 255 31 HOH HOH A . D 4 HOH 32 256 32 HOH HOH A . D 4 HOH 33 257 33 HOH HOH A . D 4 HOH 34 258 34 HOH HOH A . D 4 HOH 35 259 35 HOH HOH A . D 4 HOH 36 260 36 HOH HOH A . D 4 HOH 37 261 37 HOH HOH A . D 4 HOH 38 262 38 HOH HOH A . D 4 HOH 39 263 39 HOH HOH A . D 4 HOH 40 264 40 HOH HOH A . D 4 HOH 41 265 41 HOH HOH A . D 4 HOH 42 266 42 HOH HOH A . D 4 HOH 43 267 43 HOH HOH A . D 4 HOH 44 268 44 HOH HOH A . D 4 HOH 45 269 45 HOH HOH A . D 4 HOH 46 270 46 HOH HOH A . D 4 HOH 47 271 47 HOH HOH A . D 4 HOH 48 272 48 HOH HOH A . D 4 HOH 49 273 49 HOH HOH A . D 4 HOH 50 274 50 HOH HOH A . D 4 HOH 51 275 51 HOH HOH A . D 4 HOH 52 276 52 HOH HOH A . D 4 HOH 53 277 53 HOH HOH A . D 4 HOH 54 278 54 HOH HOH A . D 4 HOH 55 279 55 HOH HOH A . D 4 HOH 56 280 56 HOH HOH A . D 4 HOH 57 281 57 HOH HOH A . D 4 HOH 58 282 58 HOH HOH A . D 4 HOH 59 283 59 HOH HOH A . D 4 HOH 60 284 60 HOH HOH A . D 4 HOH 61 285 61 HOH HOH A . D 4 HOH 62 286 62 HOH HOH A . D 4 HOH 63 287 63 HOH HOH A . D 4 HOH 64 288 64 HOH HOH A . D 4 HOH 65 289 65 HOH HOH A . D 4 HOH 66 290 66 HOH HOH A . D 4 HOH 67 291 67 HOH HOH A . D 4 HOH 68 292 68 HOH HOH A . D 4 HOH 69 293 69 HOH HOH A . D 4 HOH 70 294 70 HOH HOH A . D 4 HOH 71 295 71 HOH HOH A . D 4 HOH 72 296 72 HOH HOH A . D 4 HOH 73 297 73 HOH HOH A . D 4 HOH 74 298 74 HOH HOH A . D 4 HOH 75 299 75 HOH HOH A . D 4 HOH 76 300 76 HOH HOH A . D 4 HOH 77 301 77 HOH HOH A . D 4 HOH 78 302 78 HOH HOH A . D 4 HOH 79 303 79 HOH HOH A . D 4 HOH 80 304 80 HOH HOH A . D 4 HOH 81 305 81 HOH HOH A . D 4 HOH 82 306 82 HOH HOH A . D 4 HOH 83 307 83 HOH HOH A . D 4 HOH 84 308 84 HOH HOH A . D 4 HOH 85 309 85 HOH HOH A . D 4 HOH 86 310 86 HOH HOH A . D 4 HOH 87 311 87 HOH HOH A . D 4 HOH 88 312 88 HOH HOH A . D 4 HOH 89 313 89 HOH HOH A . D 4 HOH 90 314 90 HOH HOH A . D 4 HOH 91 315 91 HOH HOH A . D 4 HOH 92 316 92 HOH HOH A . D 4 HOH 93 317 93 HOH HOH A . D 4 HOH 94 318 94 HOH HOH A . D 4 HOH 95 319 95 HOH HOH A . D 4 HOH 96 320 96 HOH HOH A . D 4 HOH 97 321 97 HOH HOH A . D 4 HOH 98 322 98 HOH HOH A . D 4 HOH 99 323 99 HOH HOH A . D 4 HOH 100 324 100 HOH HOH A . D 4 HOH 101 325 101 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 46 A MSE 43 ? MET SELENOMETHIONINE 3 A MSE 63 A MSE 60 ? MET SELENOMETHIONINE 4 A MSE 82 A MSE 79 ? MET SELENOMETHIONINE 5 A MSE 209 A MSE 206 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5740 ? 1 MORE -60 ? 1 'SSA (A^2)' 17760 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_664 -y+1,-x+1,-z-1/6 0.5000000000 -0.8660254038 0.0000000000 41.8430000000 -0.8660254038 -0.5000000000 0.0000000000 72.4742019411 0.0000000000 0.0000000000 -1.0000000000 -35.4850000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 262 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 173 ? A ASP 170 ? 1_555 NI ? B NI . ? A NI 223 ? 1_555 ND2 ? A ASN 174 ? A ASN 171 ? 1_555 80.3 ? 2 OD2 ? A ASP 173 ? A ASP 170 ? 1_555 NI ? B NI . ? A NI 223 ? 1_555 OD2 ? A ASP 147 ? A ASP 144 ? 1_555 100.7 ? 3 ND2 ? A ASN 174 ? A ASN 171 ? 1_555 NI ? B NI . ? A NI 223 ? 1_555 OD2 ? A ASP 147 ? A ASP 144 ? 1_555 77.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-28 2 'Structure model' 1 1 2015-06-24 3 'Structure model' 1 2 2015-10-21 4 'Structure model' 1 3 2016-02-10 5 'Structure model' 1 4 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.7_650 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 294 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 310 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.93 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? 137.95 120.92 2 1 SER A 20 ? ? -140.76 -40.75 3 1 ARG A 22 ? ? -114.84 65.58 4 1 PHE A 71 ? ? 50.59 -124.65 5 1 SER A 120 ? ? 175.48 167.09 6 1 HIS A 131 ? ? -63.31 3.07 7 1 ASP A 144 ? ? -153.16 53.76 8 1 ALA A 145 ? ? -120.06 -140.61 9 1 GLN A 184 ? ? 74.31 -3.87 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 S-ADENOSYL-L-HOMOCYSTEINE SAH 4 water HOH #