HEADER HYDROLASE 09-SEP-11 3TRD TITLE STRUCTURE OF AN ALPHA-BETA SERINE HYDROLASE HOMOLOGUE FROM COXIELLA TITLE 2 BURNETII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA/BETA HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXIELLA BURNETII; SOURCE 3 ORGANISM_TAXID: 777; SOURCE 4 GENE: CBU_1769; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS CELLULAR PROCESSES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.CHEUNG,M.C.FRANKLIN,M.RUDOLPH,M.CASSIDY,E.GARY,F.BURSHTEYN,J.LOVE REVDAT 5 28-FEB-24 3TRD 1 REMARK SEQADV LINK REVDAT 4 08-NOV-17 3TRD 1 REMARK REVDAT 3 27-JAN-16 3TRD 1 JRNL REVDAT 2 24-JUN-15 3TRD 1 JRNL REVDAT 1 21-SEP-11 3TRD 0 JRNL AUTH M.C.FRANKLIN,J.CHEUNG,M.J.RUDOLPH,F.BURSHTEYN,M.CASSIDY, JRNL AUTH 2 E.GARY,B.HILLERICH,Z.K.YAO,P.R.CARLIER,M.TOTROV,J.D.LOVE JRNL TITL STRUCTURAL GENOMICS FOR DRUG DESIGN AGAINST THE PATHOGEN JRNL TITL 2 COXIELLA BURNETII. JRNL REF PROTEINS V. 83 2124 2015 JRNL REFN ISSN 0887-3585 JRNL PMID 26033498 JRNL DOI 10.1002/PROT.24841 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 28220 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.2633 - 3.2306 0.98 2827 152 0.1514 0.1694 REMARK 3 2 3.2306 - 2.5646 1.00 2767 136 0.1477 0.1878 REMARK 3 3 2.5646 - 2.2405 1.00 2736 144 0.1457 0.1958 REMARK 3 4 2.2405 - 2.0357 1.00 2704 144 0.1572 0.1756 REMARK 3 5 2.0357 - 1.8898 0.99 2684 149 0.1545 0.1975 REMARK 3 6 1.8898 - 1.7784 0.99 2636 135 0.1630 0.2074 REMARK 3 7 1.7784 - 1.6893 0.98 2638 149 0.1899 0.2233 REMARK 3 8 1.6893 - 1.6158 0.98 2635 135 0.2131 0.2652 REMARK 3 9 1.6158 - 1.5536 0.98 2604 137 0.2666 0.3089 REMARK 3 10 1.5536 - 1.5000 0.96 2552 156 0.3897 0.3852 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 61.93 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45430 REMARK 3 B22 (A**2) : 2.92920 REMARK 3 B33 (A**2) : -0.73450 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1691 REMARK 3 ANGLE : 0.992 2295 REMARK 3 CHIRALITY : 0.068 253 REMARK 3 PLANARITY : 0.005 296 REMARK 3 DIHEDRAL : 13.235 602 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ -2:13) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0953 57.4998 -5.9441 REMARK 3 T TENSOR REMARK 3 T11: 0.1396 T22: 0.0909 REMARK 3 T33: 0.1169 T12: 0.0080 REMARK 3 T13: -0.0214 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.0132 L22: 0.0308 REMARK 3 L33: 0.1442 L12: -0.0058 REMARK 3 L13: 0.0206 L23: 0.0309 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: 0.0178 S13: 0.0136 REMARK 3 S21: 0.0509 S22: -0.0134 S23: -0.0677 REMARK 3 S31: -0.1590 S32: -0.0329 S33: 0.0083 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 14:28) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1963 53.0841 -5.5797 REMARK 3 T TENSOR REMARK 3 T11: 0.1485 T22: 0.1679 REMARK 3 T33: 0.1173 T12: 0.0574 REMARK 3 T13: 0.0272 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 0.2624 L22: 0.1712 REMARK 3 L33: 0.1895 L12: -0.1982 REMARK 3 L13: -0.0116 L23: -0.0834 REMARK 3 S TENSOR REMARK 3 S11: -0.1797 S12: -0.2091 S13: 0.2256 REMARK 3 S21: 0.1866 S22: 0.1301 S23: 0.0248 REMARK 3 S31: -0.2022 S32: -0.0903 S33: -0.1669 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 29:162) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5300 44.3929 -16.5611 REMARK 3 T TENSOR REMARK 3 T11: 0.0739 T22: 0.0727 REMARK 3 T33: 0.0712 T12: 0.0008 REMARK 3 T13: -0.0040 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.5475 L22: 0.5781 REMARK 3 L33: 0.2864 L12: 0.0776 REMARK 3 L13: 0.0873 L23: 0.1631 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: -0.0039 S13: -0.0060 REMARK 3 S21: 0.0518 S22: 0.0037 S23: -0.0342 REMARK 3 S31: 0.0140 S32: -0.0057 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 163:172) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5938 30.7335 -29.2806 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: 0.1309 REMARK 3 T33: 0.1973 T12: -0.0008 REMARK 3 T13: -0.0179 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.0135 L22: 0.0122 REMARK 3 L33: 0.0675 L12: -0.0037 REMARK 3 L13: -0.0200 L23: 0.0098 REMARK 3 S TENSOR REMARK 3 S11: 0.1772 S12: 0.0311 S13: -0.2297 REMARK 3 S21: 0.0535 S22: 0.0467 S23: -0.1006 REMARK 3 S31: 0.0405 S32: 0.0858 S33: 0.0044 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 173:192) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1792 39.8740 -25.5981 REMARK 3 T TENSOR REMARK 3 T11: 0.1020 T22: 0.1185 REMARK 3 T33: 0.1077 T12: -0.0160 REMARK 3 T13: -0.0122 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.0560 L22: 0.0451 REMARK 3 L33: 0.0664 L12: 0.0324 REMARK 3 L13: 0.0218 L23: 0.0708 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: -0.0259 S13: -0.0487 REMARK 3 S21: 0.0834 S22: 0.0400 S23: 0.0389 REMARK 3 S31: 0.0350 S32: -0.0334 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 193:205) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8971 44.3773 -17.4637 REMARK 3 T TENSOR REMARK 3 T11: 0.0967 T22: 0.1961 REMARK 3 T33: 0.1642 T12: -0.0033 REMARK 3 T13: 0.0236 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 0.0092 L22: 0.0965 REMARK 3 L33: 0.1389 L12: 0.0206 REMARK 3 L13: -0.0297 L23: 0.0095 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: 0.0149 S13: -0.0244 REMARK 3 S21: 0.0297 S22: -0.1379 S23: 0.2615 REMARK 3 S31: 0.0590 S32: -0.2904 S33: -0.1144 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TRD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067826. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28456 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 0.63M SODIUM REMARK 280 DIHYDROGEN PHOSPHATE, 0.94M DIPOTASSIUM HYDROGEN PHOSPHATE, REMARK 280 0.02M SODIUM HYDROXIDE, PH 4.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.93050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.25650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.95250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 31.25650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.93050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.95250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 469 O HOH A 470 1.93 REMARK 500 O HOH A 252 O HOH A 255 2.10 REMARK 500 O HOH A 265 O HOH A 479 2.18 REMARK 500 O HOH A 263 O HOH A 459 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 110 -116.10 47.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 209 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 70 O REMARK 620 2 GLY A 72 O 93.2 REMARK 620 3 SER A 74 O 84.4 93.3 REMARK 620 4 HOH A 253 O 53.1 73.3 133.3 REMARK 620 5 HOH A 354 O 86.1 178.0 84.7 107.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 208 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 110 OG REMARK 620 2 ACT A 206 OXT 76.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 211 DBREF 3TRD A 1 205 UNP Q83AV9 Q83AV9_COXBU 1 205 SEQADV 3TRD SER A -2 UNP Q83AV9 EXPRESSION TAG SEQADV 3TRD TYR A -1 UNP Q83AV9 EXPRESSION TAG SEQADV 3TRD VAL A 0 UNP Q83AV9 EXPRESSION TAG SEQRES 1 A 208 SER TYR VAL MET THR ASN GLU ASP PHE LEU ILE GLN GLY SEQRES 2 A 208 PRO VAL GLY GLN LEU GLU VAL MET ILE THR ARG PRO LYS SEQRES 3 A 208 GLY ILE GLU LYS SER VAL THR GLY ILE ILE CYS HIS PRO SEQRES 4 A 208 HIS PRO LEU HIS GLY GLY THR MET ASN ASN LYS VAL VAL SEQRES 5 A 208 THR THR LEU ALA LYS ALA LEU ASP GLU LEU GLY LEU LYS SEQRES 6 A 208 THR VAL ARG PHE ASN PHE ARG GLY VAL GLY LYS SER GLN SEQRES 7 A 208 GLY ARG TYR ASP ASN GLY VAL GLY GLU VAL GLU ASP LEU SEQRES 8 A 208 LYS ALA VAL LEU ARG TRP VAL GLU HIS HIS TRP SER GLN SEQRES 9 A 208 ASP ASP ILE TRP LEU ALA GLY PHE SER PHE GLY ALA TYR SEQRES 10 A 208 ILE SER ALA LYS VAL ALA TYR ASP GLN LYS VAL ALA GLN SEQRES 11 A 208 LEU ILE SER VAL ALA PRO PRO VAL PHE TYR GLU GLY PHE SEQRES 12 A 208 ALA SER LEU THR GLN MET ALA SER PRO TRP LEU ILE VAL SEQRES 13 A 208 GLN GLY ASP GLN ASP GLU VAL VAL PRO PHE GLU GLN VAL SEQRES 14 A 208 LYS ALA PHE VAL ASN GLN ILE SER SER PRO VAL GLU PHE SEQRES 15 A 208 VAL VAL MET SER GLY ALA SER HIS PHE PHE HIS GLY ARG SEQRES 16 A 208 LEU ILE GLU LEU ARG GLU LEU LEU VAL ARG ASN LEU ALA HET ACT A 206 4 HET ACT A 207 4 HET NA A 208 1 HET NA A 209 1 HET PO4 A 210 5 HET PO4 A 211 5 HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 NA 2(NA 1+) FORMUL 6 PO4 2(O4 P 3-) FORMUL 8 HOH *269(H2 O) HELIX 1 1 HIS A 37 GLY A 41 5 5 HELIX 2 2 ASN A 46 LEU A 59 1 14 HELIX 3 3 VAL A 82 TRP A 99 1 18 HELIX 4 4 SER A 110 GLN A 123 1 14 HELIX 5 5 TYR A 137 ALA A 141 5 5 HELIX 6 6 PRO A 162 ILE A 173 1 12 HELIX 7 7 ARG A 192 ALA A 205 1 14 SHEET 1 A 8 PHE A 6 GLN A 9 0 SHEET 2 A 8 GLN A 14 THR A 20 -1 O VAL A 17 N PHE A 6 SHEET 3 A 8 LYS A 62 PHE A 66 -1 O ARG A 65 N MET A 18 SHEET 4 A 8 VAL A 29 CYS A 34 1 N ILE A 33 O VAL A 64 SHEET 5 A 8 ASP A 103 PHE A 109 1 O ASP A 103 N THR A 30 SHEET 6 A 8 GLN A 127 VAL A 131 1 O GLN A 127 N LEU A 106 SHEET 7 A 8 TRP A 150 GLY A 155 1 O VAL A 153 N SER A 130 SHEET 8 A 8 GLU A 178 MET A 182 1 O VAL A 180 N ILE A 152 LINK O GLY A 70 NA NA A 209 1555 1555 3.17 LINK O GLY A 72 NA NA A 209 1555 1555 2.81 LINK O SER A 74 NA NA A 209 1555 1555 2.75 LINK OG SER A 110 NA NA A 208 1555 1555 2.97 LINK OXT ACT A 206 NA NA A 208 1555 1555 2.71 LINK NA NA A 209 O HOH A 253 1555 1555 2.65 LINK NA NA A 209 O HOH A 354 1555 1555 2.82 SITE 1 AC1 9 TYR A -1 HIS A 37 SER A 110 PHE A 136 SITE 2 AC1 9 TYR A 137 VAL A 160 SER A 183 NA A 208 SITE 3 AC1 9 HOH A 320 SITE 1 AC2 5 THR A 43 ASN A 45 HOH A 289 HOH A 428 SITE 2 AC2 5 HOH A 451 SITE 1 AC3 5 TYR A -1 HIS A 37 SER A 110 PHE A 111 SITE 2 AC3 5 ACT A 206 SITE 1 AC4 6 GLY A 70 GLY A 72 SER A 74 HOH A 253 SITE 2 AC4 6 HOH A 333 HOH A 354 SITE 1 AC5 10 SER A -2 TYR A -1 ASN A 46 LYS A 47 SITE 2 AC5 10 HOH A 248 HOH A 274 HOH A 304 HOH A 366 SITE 3 AC5 10 HOH A 444 HOH A 448 SITE 1 AC6 12 SER A -2 ARG A 21 GLU A 26 GLY A 41 SITE 2 AC6 12 LYS A 62 TRP A 99 HOH A 215 HOH A 237 SITE 3 AC6 12 HOH A 238 HOH A 267 HOH A 378 HOH A 405 CRYST1 49.861 55.905 62.513 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020056 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017887 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015997 0.00000