data_3TRG # _entry.id 3TRG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3TRG RCSB RCSB067829 WWPDB D_1000067829 # _pdbx_database_status.entry_id 3TRG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-09-09 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cheung, J.' 1 'Franklin, M.C.' 2 'Rudolph, M.' 3 'Cassidy, M.' 4 'Gary, E.' 5 'Burshteyn, F.' 6 'Love, J.' 7 # _citation.id primary _citation.title 'Structural genomics for drug design against the pathogen Coxiella burnetii.' _citation.journal_abbrev Proteins _citation.journal_volume 83 _citation.page_first 2124 _citation.page_last 2136 _citation.year 2015 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26033498 _citation.pdbx_database_id_DOI 10.1002/prot.24841 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Franklin, M.C.' 1 primary 'Cheung, J.' 2 primary 'Rudolph, M.J.' 3 primary 'Burshteyn, F.' 4 primary 'Cassidy, M.' 5 primary 'Gary, E.' 6 primary 'Hillerich, B.' 7 primary 'Yao, Z.K.' 8 primary 'Carlier, P.R.' 9 primary 'Totrov, M.' 10 primary 'Love, J.D.' 11 # _cell.length_a 69.710 _cell.length_b 69.710 _cell.length_c 40.059 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3TRG _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 64' _symmetry.entry_id 3TRG _symmetry.Int_Tables_number 172 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Acylphosphatase 11287.373 1 3.6.1.7 ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 169 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Acylphosphate phosphohydrolase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)TQKEKNETCIHVTVSGKVQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSI(MSE)ILTEWLWE GPPQAAVSNVNWEEIVVEDYSDFRVR ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMTQKEKNETCIHVTVSGKVQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAVS NVNWEEIVVEDYSDFRVR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 THR n 1 6 GLN n 1 7 LYS n 1 8 GLU n 1 9 LYS n 1 10 ASN n 1 11 GLU n 1 12 THR n 1 13 CYS n 1 14 ILE n 1 15 HIS n 1 16 VAL n 1 17 THR n 1 18 VAL n 1 19 SER n 1 20 GLY n 1 21 LYS n 1 22 VAL n 1 23 GLN n 1 24 GLY n 1 25 VAL n 1 26 PHE n 1 27 PHE n 1 28 ARG n 1 29 GLU n 1 30 SER n 1 31 VAL n 1 32 ARG n 1 33 LYS n 1 34 LYS n 1 35 ALA n 1 36 GLU n 1 37 GLU n 1 38 LEU n 1 39 GLN n 1 40 LEU n 1 41 THR n 1 42 GLY n 1 43 TRP n 1 44 VAL n 1 45 LYS n 1 46 ASN n 1 47 LEU n 1 48 SER n 1 49 HIS n 1 50 GLY n 1 51 ASP n 1 52 VAL n 1 53 GLU n 1 54 LEU n 1 55 VAL n 1 56 ALA n 1 57 CYS n 1 58 GLY n 1 59 GLU n 1 60 ARG n 1 61 ASP n 1 62 SER n 1 63 ILE n 1 64 MSE n 1 65 ILE n 1 66 LEU n 1 67 THR n 1 68 GLU n 1 69 TRP n 1 70 LEU n 1 71 TRP n 1 72 GLU n 1 73 GLY n 1 74 PRO n 1 75 PRO n 1 76 GLN n 1 77 ALA n 1 78 ALA n 1 79 VAL n 1 80 SER n 1 81 ASN n 1 82 VAL n 1 83 ASN n 1 84 TRP n 1 85 GLU n 1 86 GLU n 1 87 ILE n 1 88 VAL n 1 89 VAL n 1 90 GLU n 1 91 ASP n 1 92 TYR n 1 93 SER n 1 94 ASP n 1 95 PHE n 1 96 ARG n 1 97 VAL n 1 98 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'acyP, CBU_1995' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RSA493 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Coxiella burnetii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 227377 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ACYP_COXBU _struct_ref.pdbx_db_accession Q83AB0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTQKEKNETCIHVTVSGKVQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAVSNVN WEEIVVEDYSDFRVR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TRG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 98 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q83AB0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 95 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 95 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3TRG SER A 1 ? UNP Q83AB0 ? ? 'EXPRESSION TAG' -2 1 1 3TRG ASN A 2 ? UNP Q83AB0 ? ? 'EXPRESSION TAG' -1 2 1 3TRG ALA A 3 ? UNP Q83AB0 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3TRG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'sitting drop' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;0.1M tri-sodium citrate pH 5.6 0.2M ammonium acetate 30% PEG 4000, sitting drop, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2011-05-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'VARIMAX HF' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3TRG _reflns.d_resolution_high 1.600 _reflns.d_resolution_low 30.000 _reflns.number_obs 14789 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_netI_over_sigmaI 14.600 _reflns.pdbx_chi_squared 1.058 _reflns.pdbx_redundancy 5.500 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.number_all 14803 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.600 1.630 ? ? ? 0.441 ? ? 1.162 3.500 ? 726 99.900 1 1 1.630 1.660 ? ? ? 0.381 ? ? 1.307 3.600 ? 748 100.000 2 1 1.660 1.690 ? ? ? 0.354 ? ? 1.117 3.700 ? 708 99.700 3 1 1.690 1.720 ? ? ? 0.315 ? ? 1.053 3.800 ? 740 99.900 4 1 1.720 1.760 ? ? ? 0.270 ? ? 1.028 3.900 ? 731 100.000 5 1 1.760 1.800 ? ? ? 0.233 ? ? 1.006 4.100 ? 730 100.000 6 1 1.800 1.850 ? ? ? 0.212 ? ? 1.515 4.200 ? 740 100.000 7 1 1.850 1.900 ? ? ? 0.176 ? ? 1.064 4.400 ? 748 100.000 8 1 1.900 1.950 ? ? ? 0.134 ? ? 0.967 4.500 ? 725 99.900 9 1 1.950 2.020 ? ? ? 0.101 ? ? 0.886 4.600 ? 742 100.000 10 1 2.020 2.090 ? ? ? 0.086 ? ? 0.876 4.700 ? 722 100.000 11 1 2.090 2.170 ? ? ? 0.084 ? ? 1.097 5.100 ? 747 100.000 12 1 2.170 2.270 ? ? ? 0.074 ? ? 1.213 5.800 ? 744 100.000 13 1 2.270 2.390 ? ? ? 0.066 ? ? 1.109 6.000 ? 733 100.000 14 1 2.390 2.540 ? ? ? 0.058 ? ? 1.023 6.200 ? 740 100.000 15 1 2.540 2.740 ? ? ? 0.052 ? ? 1.001 6.700 ? 738 100.000 16 1 2.740 3.010 ? ? ? 0.040 ? ? 0.914 7.400 ? 747 100.000 17 1 3.010 3.450 ? ? ? 0.030 ? ? 0.839 9.200 ? 752 100.000 18 1 3.450 4.340 ? ? ? 0.027 ? ? 0.996 9.700 ? 747 100.000 19 1 4.340 30.000 ? ? ? 0.031 ? ? 1.307 8.400 ? 781 99.500 20 1 # _refine.entry_id 3TRG _refine.ls_d_res_high 1.6010 _refine.ls_d_res_low 26.2950 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.9000 _refine.ls_number_reflns_obs 14767 _refine.ls_number_reflns_all 15529 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.1723 _refine.ls_R_factor_obs 0.1723 _refine.ls_R_factor_R_work 0.1715 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1889 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0600 _refine.ls_number_reflns_R_free 747 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 15.2615 _refine.solvent_model_param_bsol 55.1790 _refine.solvent_model_param_ksol 0.3820 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.3820 _refine.aniso_B[2][2] -0.3820 _refine.aniso_B[3][3] 0.7640 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1600 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 0.9000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.6100 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8876 _refine.B_iso_max 46.150 _refine.B_iso_min 5.640 _refine.pdbx_overall_phase_error 17.9700 _refine.occupancy_max 1.000 _refine.occupancy_min 0.140 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 767 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 169 _refine_hist.number_atoms_total 941 _refine_hist.d_res_high 1.6010 _refine_hist.d_res_low 26.2950 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 802 0.004 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1086 0.870 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 120 0.063 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 140 0.002 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 295 12.702 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.6006 1.7242 5 100.0000 2771 . 0.2573 0.3023 . 145 . 2916 . . 'X-RAY DIFFRACTION' 1.7242 1.8976 5 100.0000 2774 . 0.1769 0.2056 . 172 . 2946 . . 'X-RAY DIFFRACTION' 1.8976 2.1721 5 100.0000 2793 . 0.1591 0.1872 . 140 . 2933 . . 'X-RAY DIFFRACTION' 2.1721 2.7362 5 100.0000 2803 . 0.1647 0.1912 . 149 . 2952 . . 'X-RAY DIFFRACTION' 2.7362 26.2985 5 100.0000 2879 . 0.1627 0.1604 . 141 . 3020 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3TRG _struct.title 'Structure of an acylphosphatase from Coxiella burnetii' _struct.pdbx_descriptor 'Acylphosphatase (E.C.3.6.1.7)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TRG _struct_keywords.text 'Fatty acid and phospholipid metabolism, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 5 ? ASN A 10 ? THR A 2 ASN A 7 1 ? 6 HELX_P HELX_P2 2 PHE A 26 ? LEU A 38 ? PHE A 23 LEU A 35 1 ? 13 HELX_P HELX_P3 3 ARG A 60 ? LEU A 70 ? ARG A 57 LEU A 67 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 10 A CYS 54 1_555 ? ? ? ? ? ? ? 2.041 ? covale1 covale ? ? A MSE 4 C ? ? ? 1_555 A THR 5 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A ILE 63 C A ? ? 1_555 A MSE 64 N ? ? A ILE 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A ILE 63 C B ? ? 1_555 A MSE 64 N ? ? A ILE 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 64 C ? ? ? 1_555 A ILE 65 N ? ? A MSE 61 A ILE 62 1_555 ? ? ? ? ? ? ? 1.326 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 78 ? ILE A 87 ? ALA A 75 ILE A 84 A 2 GLU A 11 ? LYS A 21 ? GLU A 8 LYS A 18 A 3 VAL A 52 ? GLU A 59 ? VAL A 49 GLU A 56 A 4 THR A 41 ? ASN A 46 ? THR A 38 ASN A 43 A 5 PHE A 95 ? VAL A 97 ? PHE A 92 VAL A 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN A 83 ? O ASN A 80 N THR A 17 ? N THR A 14 A 2 3 N VAL A 16 ? N VAL A 13 O LEU A 54 ? O LEU A 51 A 3 4 O CYS A 57 ? O CYS A 54 N THR A 41 ? N THR A 38 A 4 5 N GLY A 42 ? N GLY A 39 O ARG A 96 ? O ARG A 93 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 96' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 97' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG A 32 ? ARG A 29 . ? 1_555 ? 2 AC1 4 ARG A 96 ? ARG A 93 . ? 1_555 ? 3 AC1 4 VAL A 97 ? VAL A 94 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 242 . ? 1_555 ? 5 AC2 5 HIS A 15 ? HIS A 12 . ? 1_555 ? 6 AC2 5 THR A 17 ? THR A 14 . ? 1_555 ? 7 AC2 5 ASN A 83 ? ASN A 80 . ? 1_555 ? 8 AC2 5 GLU A 85 ? GLU A 82 . ? 1_555 ? 9 AC2 5 HOH D . ? HOH A 188 . ? 1_555 ? # _atom_sites.entry_id 3TRG _atom_sites.fract_transf_matrix[1][1] 0.014345 _atom_sites.fract_transf_matrix[1][2] 0.008282 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016564 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024963 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 THR 5 2 2 THR THR A . n A 1 6 GLN 6 3 3 GLN GLN A . n A 1 7 LYS 7 4 4 LYS LYS A . n A 1 8 GLU 8 5 5 GLU GLU A . n A 1 9 LYS 9 6 6 LYS LYS A . n A 1 10 ASN 10 7 7 ASN ASN A . n A 1 11 GLU 11 8 8 GLU GLU A . n A 1 12 THR 12 9 9 THR THR A . n A 1 13 CYS 13 10 10 CYS CYS A . n A 1 14 ILE 14 11 11 ILE ILE A . n A 1 15 HIS 15 12 12 HIS HIS A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 THR 17 14 14 THR THR A . n A 1 18 VAL 18 15 15 VAL VAL A . n A 1 19 SER 19 16 16 SER SER A . n A 1 20 GLY 20 17 17 GLY GLY A . n A 1 21 LYS 21 18 18 LYS LYS A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 GLN 23 20 20 GLN GLN A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 VAL 25 22 22 VAL VAL A . n A 1 26 PHE 26 23 23 PHE PHE A . n A 1 27 PHE 27 24 24 PHE PHE A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 GLU 29 26 26 GLU GLU A . n A 1 30 SER 30 27 27 SER SER A . n A 1 31 VAL 31 28 28 VAL VAL A . n A 1 32 ARG 32 29 29 ARG ARG A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 LYS 34 31 31 LYS LYS A . n A 1 35 ALA 35 32 32 ALA ALA A . n A 1 36 GLU 36 33 33 GLU GLU A . n A 1 37 GLU 37 34 34 GLU GLU A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 GLN 39 36 36 GLN GLN A . n A 1 40 LEU 40 37 37 LEU LEU A . n A 1 41 THR 41 38 38 THR THR A . n A 1 42 GLY 42 39 39 GLY GLY A . n A 1 43 TRP 43 40 40 TRP TRP A . n A 1 44 VAL 44 41 41 VAL VAL A . n A 1 45 LYS 45 42 42 LYS LYS A . n A 1 46 ASN 46 43 43 ASN ASN A . n A 1 47 LEU 47 44 44 LEU LEU A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 HIS 49 46 46 HIS HIS A . n A 1 50 GLY 50 47 47 GLY GLY A . n A 1 51 ASP 51 48 48 ASP ASP A . n A 1 52 VAL 52 49 49 VAL VAL A . n A 1 53 GLU 53 50 50 GLU GLU A . n A 1 54 LEU 54 51 51 LEU LEU A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 ALA 56 53 53 ALA ALA A . n A 1 57 CYS 57 54 54 CYS CYS A . n A 1 58 GLY 58 55 55 GLY GLY A . n A 1 59 GLU 59 56 56 GLU GLU A . n A 1 60 ARG 60 57 57 ARG ARG A . n A 1 61 ASP 61 58 58 ASP ASP A . n A 1 62 SER 62 59 59 SER SER A . n A 1 63 ILE 63 60 60 ILE ILE A . n A 1 64 MSE 64 61 61 MSE MSE A . n A 1 65 ILE 65 62 62 ILE ILE A . n A 1 66 LEU 66 63 63 LEU LEU A . n A 1 67 THR 67 64 64 THR THR A . n A 1 68 GLU 68 65 65 GLU GLU A . n A 1 69 TRP 69 66 66 TRP TRP A . n A 1 70 LEU 70 67 67 LEU LEU A . n A 1 71 TRP 71 68 68 TRP TRP A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 PRO 74 71 71 PRO PRO A . n A 1 75 PRO 75 72 72 PRO PRO A . n A 1 76 GLN 76 73 73 GLN GLN A . n A 1 77 ALA 77 74 74 ALA ALA A . n A 1 78 ALA 78 75 75 ALA ALA A . n A 1 79 VAL 79 76 76 VAL VAL A . n A 1 80 SER 80 77 77 SER SER A . n A 1 81 ASN 81 78 78 ASN ASN A . n A 1 82 VAL 82 79 79 VAL VAL A . n A 1 83 ASN 83 80 80 ASN ASN A . n A 1 84 TRP 84 81 81 TRP TRP A . n A 1 85 GLU 85 82 82 GLU GLU A . n A 1 86 GLU 86 83 83 GLU GLU A . n A 1 87 ILE 87 84 84 ILE ILE A . n A 1 88 VAL 88 85 85 VAL VAL A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 GLU 90 87 87 GLU GLU A . n A 1 91 ASP 91 88 88 ASP ASP A . n A 1 92 TYR 92 89 89 TYR TYR A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 ASP 94 91 91 ASP ASP A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 ARG 98 95 95 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 96 96 CL CL A . C 3 EDO 1 97 97 EDO EDO A . D 4 HOH 1 98 98 HOH HOH A . D 4 HOH 2 99 99 HOH HOH A . D 4 HOH 3 100 100 HOH HOH A . D 4 HOH 4 101 101 HOH HOH A . D 4 HOH 5 102 102 HOH HOH A . D 4 HOH 6 103 103 HOH HOH A . D 4 HOH 7 104 104 HOH HOH A . D 4 HOH 8 105 105 HOH HOH A . D 4 HOH 9 106 106 HOH HOH A . D 4 HOH 10 107 107 HOH HOH A . D 4 HOH 11 108 108 HOH HOH A . D 4 HOH 12 109 109 HOH HOH A . D 4 HOH 13 110 110 HOH HOH A . D 4 HOH 14 111 111 HOH HOH A . D 4 HOH 15 112 112 HOH HOH A . D 4 HOH 16 113 113 HOH HOH A . D 4 HOH 17 114 114 HOH HOH A . D 4 HOH 18 115 115 HOH HOH A . D 4 HOH 19 116 116 HOH HOH A . D 4 HOH 20 117 117 HOH HOH A . D 4 HOH 21 118 118 HOH HOH A . D 4 HOH 22 119 119 HOH HOH A . D 4 HOH 23 120 120 HOH HOH A . D 4 HOH 24 121 121 HOH HOH A . D 4 HOH 25 122 122 HOH HOH A . D 4 HOH 26 123 123 HOH HOH A . D 4 HOH 27 124 124 HOH HOH A . D 4 HOH 28 125 125 HOH HOH A . D 4 HOH 29 126 126 HOH HOH A . D 4 HOH 30 127 127 HOH HOH A . D 4 HOH 31 128 128 HOH HOH A . D 4 HOH 32 129 129 HOH HOH A . D 4 HOH 33 130 130 HOH HOH A . D 4 HOH 34 131 131 HOH HOH A . D 4 HOH 35 132 132 HOH HOH A . D 4 HOH 36 133 133 HOH HOH A . D 4 HOH 37 134 134 HOH HOH A . D 4 HOH 38 135 135 HOH HOH A . D 4 HOH 39 136 136 HOH HOH A . D 4 HOH 40 137 137 HOH HOH A . D 4 HOH 41 138 138 HOH HOH A . D 4 HOH 42 139 139 HOH HOH A . D 4 HOH 43 140 140 HOH HOH A . D 4 HOH 44 141 141 HOH HOH A . D 4 HOH 45 142 142 HOH HOH A . D 4 HOH 46 143 143 HOH HOH A . D 4 HOH 47 144 144 HOH HOH A . D 4 HOH 48 145 145 HOH HOH A . D 4 HOH 49 146 146 HOH HOH A . D 4 HOH 50 147 147 HOH HOH A . D 4 HOH 51 148 148 HOH HOH A . D 4 HOH 52 149 149 HOH HOH A . D 4 HOH 53 150 150 HOH HOH A . D 4 HOH 54 151 151 HOH HOH A . D 4 HOH 55 152 152 HOH HOH A . D 4 HOH 56 153 153 HOH HOH A . D 4 HOH 57 154 154 HOH HOH A . D 4 HOH 58 155 155 HOH HOH A . D 4 HOH 59 156 156 HOH HOH A . D 4 HOH 60 157 157 HOH HOH A . D 4 HOH 61 158 158 HOH HOH A . D 4 HOH 62 159 159 HOH HOH A . D 4 HOH 63 160 160 HOH HOH A . D 4 HOH 64 161 161 HOH HOH A . D 4 HOH 65 162 162 HOH HOH A . D 4 HOH 66 163 163 HOH HOH A . D 4 HOH 67 164 164 HOH HOH A . D 4 HOH 68 165 165 HOH HOH A . D 4 HOH 69 166 166 HOH HOH A . D 4 HOH 70 167 167 HOH HOH A . D 4 HOH 71 168 168 HOH HOH A . D 4 HOH 72 169 169 HOH HOH A . D 4 HOH 73 170 170 HOH HOH A . D 4 HOH 74 171 171 HOH HOH A . D 4 HOH 75 172 172 HOH HOH A . D 4 HOH 76 173 173 HOH HOH A . D 4 HOH 77 174 174 HOH HOH A . D 4 HOH 78 175 175 HOH HOH A . D 4 HOH 79 176 176 HOH HOH A . D 4 HOH 80 177 177 HOH HOH A . D 4 HOH 81 178 178 HOH HOH A . D 4 HOH 82 179 179 HOH HOH A . D 4 HOH 83 180 180 HOH HOH A . D 4 HOH 84 181 181 HOH HOH A . D 4 HOH 85 182 182 HOH HOH A . D 4 HOH 86 183 183 HOH HOH A . D 4 HOH 87 184 184 HOH HOH A . D 4 HOH 88 185 185 HOH HOH A . D 4 HOH 89 186 186 HOH HOH A . D 4 HOH 90 187 187 HOH HOH A . D 4 HOH 91 188 188 HOH HOH A . D 4 HOH 92 189 189 HOH HOH A . D 4 HOH 93 190 190 HOH HOH A . D 4 HOH 94 191 191 HOH HOH A . D 4 HOH 95 192 192 HOH HOH A . D 4 HOH 96 193 193 HOH HOH A . D 4 HOH 97 194 194 HOH HOH A . D 4 HOH 98 195 195 HOH HOH A . D 4 HOH 99 196 196 HOH HOH A . D 4 HOH 100 197 197 HOH HOH A . D 4 HOH 101 198 198 HOH HOH A . D 4 HOH 102 199 199 HOH HOH A . D 4 HOH 103 200 200 HOH HOH A . D 4 HOH 104 201 201 HOH HOH A . D 4 HOH 105 202 202 HOH HOH A . D 4 HOH 106 203 203 HOH HOH A . D 4 HOH 107 204 204 HOH HOH A . D 4 HOH 108 205 205 HOH HOH A . D 4 HOH 109 206 206 HOH HOH A . D 4 HOH 110 207 207 HOH HOH A . D 4 HOH 111 208 208 HOH HOH A . D 4 HOH 112 209 209 HOH HOH A . D 4 HOH 113 210 210 HOH HOH A . D 4 HOH 114 211 211 HOH HOH A . D 4 HOH 115 212 212 HOH HOH A . D 4 HOH 116 213 213 HOH HOH A . D 4 HOH 117 214 214 HOH HOH A . D 4 HOH 118 215 215 HOH HOH A . D 4 HOH 119 216 216 HOH HOH A . D 4 HOH 120 217 217 HOH HOH A . D 4 HOH 121 218 218 HOH HOH A . D 4 HOH 122 219 219 HOH HOH A . D 4 HOH 123 220 220 HOH HOH A . D 4 HOH 124 221 221 HOH HOH A . D 4 HOH 125 222 222 HOH HOH A . D 4 HOH 126 223 223 HOH HOH A . D 4 HOH 127 224 224 HOH HOH A . D 4 HOH 128 225 225 HOH HOH A . D 4 HOH 129 226 226 HOH HOH A . D 4 HOH 130 227 227 HOH HOH A . D 4 HOH 131 228 228 HOH HOH A . D 4 HOH 132 229 229 HOH HOH A . D 4 HOH 133 230 230 HOH HOH A . D 4 HOH 134 231 231 HOH HOH A . D 4 HOH 135 232 232 HOH HOH A . D 4 HOH 136 233 233 HOH HOH A . D 4 HOH 137 234 234 HOH HOH A . D 4 HOH 138 235 235 HOH HOH A . D 4 HOH 139 236 236 HOH HOH A . D 4 HOH 140 237 237 HOH HOH A . D 4 HOH 141 238 238 HOH HOH A . D 4 HOH 142 239 239 HOH HOH A . D 4 HOH 143 240 240 HOH HOH A . D 4 HOH 144 241 241 HOH HOH A . D 4 HOH 145 242 242 HOH HOH A . D 4 HOH 146 243 243 HOH HOH A . D 4 HOH 147 244 244 HOH HOH A . D 4 HOH 148 245 245 HOH HOH A . D 4 HOH 149 246 246 HOH HOH A . D 4 HOH 150 247 247 HOH HOH A . D 4 HOH 151 248 248 HOH HOH A . D 4 HOH 152 249 249 HOH HOH A . D 4 HOH 153 250 250 HOH HOH A . D 4 HOH 154 251 251 HOH HOH A . D 4 HOH 155 252 252 HOH HOH A . D 4 HOH 156 253 253 HOH HOH A . D 4 HOH 157 254 254 HOH HOH A . D 4 HOH 158 255 255 HOH HOH A . D 4 HOH 159 256 256 HOH HOH A . D 4 HOH 160 257 257 HOH HOH A . D 4 HOH 161 258 258 HOH HOH A . D 4 HOH 162 259 259 HOH HOH A . D 4 HOH 163 260 260 HOH HOH A . D 4 HOH 164 261 261 HOH HOH A . D 4 HOH 165 262 262 HOH HOH A . D 4 HOH 166 263 263 HOH HOH A . D 4 HOH 167 264 264 HOH HOH A . D 4 HOH 168 265 265 HOH HOH A . D 4 HOH 169 266 266 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 64 A MSE 61 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 141 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-19 2 'Structure model' 1 1 2015-06-24 3 'Structure model' 1 2 2016-01-27 4 'Structure model' 1 3 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 25.0684 12.4674 -7.1371 0.0757 0.0757 0.0590 0.0017 0.0051 -0.0019 0.2866 0.3138 0.3606 0.0228 -0.0856 -0.3117 0.0171 -0.0159 -0.0022 -0.0688 -0.0088 0.0035 0.0966 -0.1307 0.0614 'X-RAY DIFFRACTION' 2 ? refined 13.4466 20.7405 -16.7491 0.0663 0.0904 0.0800 0.0217 -0.0010 0.0028 0.1485 0.1297 0.0830 -0.1162 0.0101 -0.0217 0.0181 -0.0010 -0.0172 0.0320 -0.0198 0.0119 -0.0233 -0.0285 -0.0497 'X-RAY DIFFRACTION' 3 ? refined 19.5654 19.8310 -10.5075 0.0812 0.0733 0.0655 -0.0037 0.0138 0.0062 0.2683 0.6654 1.2855 0.3078 -0.2888 -0.7877 0.0037 0.0354 -0.0419 0.0342 0.0131 0.0037 0.0185 -0.0607 -0.1037 'X-RAY DIFFRACTION' 4 ? refined 21.3807 13.6111 -16.9011 0.0644 0.0794 0.0773 -0.0010 -0.0067 -0.0022 0.2451 0.1022 0.2266 -0.1395 0.0381 0.0002 0.0066 -0.0048 -0.0039 0.0444 -0.0773 0.0148 -0.0129 0.0205 0.0296 'X-RAY DIFFRACTION' 5 ? refined 22.7416 22.5906 -5.6098 0.1068 0.0991 0.0738 0.0259 -0.0010 -0.0052 0.7212 0.3950 0.1432 -0.5158 0.3154 -0.2184 -0.1001 0.0648 0.0285 -0.1272 0.0384 -0.0201 0.0732 -0.0870 -0.0769 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 0 ;chain 'A' and (resseq 18:35) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 0 A 0 ;chain 'A' and (resseq 36:51) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 0 A 0 ;chain 'A' and (resseq 52:60) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 0 A 0 ;chain 'A' and (resseq 61:101) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 0 A 0 ;chain 'A' and (resseq 102:112) ; ? ? ? ? ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.7_650 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 102 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 116 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.95 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 73 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 83.08 _pdbx_validate_torsion.psi -10.48 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 1,2-ETHANEDIOL EDO 4 water HOH #